Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95812.t1 | AKN91693.1 | 98.8 | 325 | 4 | 0 | 1 | 325 | 1 | 325 | 6.70E-167 | 596.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95812.t1 | Q7XA73 | 40.1 | 339 | 146 | 7 | 10 | 326 | 9 | 312 | 5.7e-50 | 199.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95812.t1 | A0A186XM88 | 98.8 | 325 | 4 | 0 | 1 | 325 | 1 | 325 | 4.8e-167 | 596.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene95812.t1 | TF | Tify |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95812.t1 | MTR_1g102900 | 97.231 | 325 | 9 | 0 | 1 | 325 | 1 | 325 | 0.0 | 653 |
| MS.gene95812.t1 | MTR_1g102900 | 96.615 | 325 | 9 | 1 | 1 | 325 | 1 | 323 | 0.0 | 644 |
| MS.gene95812.t1 | MTR_1g102900 | 96.615 | 325 | 9 | 1 | 1 | 325 | 1 | 323 | 0.0 | 644 |
| MS.gene95812.t1 | MTR_1g102900 | 96.484 | 256 | 9 | 0 | 1 | 256 | 1 | 256 | 0.0 | 516 |
| MS.gene95812.t1 | MTR_1g102900 | 96.154 | 234 | 9 | 0 | 1 | 234 | 1 | 234 | 5.06e-170 | 472 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95812.t1 | AT4G14720 | 44.625 | 307 | 120 | 7 | 1 | 285 | 1 | 279 | 1.02e-68 | 217 |
| MS.gene95812.t1 | AT4G14720 | 44.625 | 307 | 120 | 7 | 1 | 285 | 1 | 279 | 1.56e-68 | 217 |
| MS.gene95812.t1 | AT4G14713 | 41.593 | 339 | 141 | 8 | 10 | 326 | 9 | 312 | 7.15e-68 | 215 |
| MS.gene95812.t1 | AT4G14713 | 43.657 | 268 | 103 | 5 | 10 | 256 | 9 | 249 | 1.58e-58 | 189 |
| MS.gene95812.t1 | AT4G14713 | 39.113 | 248 | 103 | 4 | 10 | 236 | 9 | 229 | 5.47e-45 | 154 |
| MS.gene95812.t1 | AT4G14713 | 44.059 | 202 | 79 | 4 | 10 | 190 | 9 | 197 | 1.97e-42 | 146 |
| MS.gene95812.t1 | AT4G14713 | 44.059 | 202 | 79 | 4 | 10 | 190 | 9 | 197 | 1.97e-42 | 146 |
Find 102 sgRNAs with CRISPR-Local
Find 321 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCATTGATTTGAATGATAA+AGG | 0.266889 | 1.1:-73840780 | MS.gene95812:CDS |
| CAGGGATGCGCAGGCCTTCC+TGG | 0.302807 | 1.1:-73845141 | MS.gene95812:CDS |
| TGGAATACCCTCTGCATTAC+AGG | 0.304356 | 1.1:-73842220 | MS.gene95812:CDS |
| TCAACCTCCGCCGAAGGCTT+TGG | 0.326869 | 1.1:-73844987 | MS.gene95812:CDS |
| AAGAAGACTTCTTTATCAAT+AGG | 0.330075 | 1.1:+73843334 | None:intergenic |
| CGCAGATTCCTCAAAGATAA+AGG | 0.351475 | 1.1:-73845438 | MS.gene95812:intron |
| GAGGTTGAGGAGGGTGGTGG+TGG | 0.353896 | 1.1:+73845002 | None:intergenic |
| ACCTTTATCATTCAAATCAA+TGG | 0.357456 | 1.1:+73840779 | None:intergenic |
| TGCACACCTAGTGGGTCATT+TGG | 0.371549 | 1.1:-73843610 | MS.gene95812:CDS |
| GAGGAGGGTGGTGGTGGTGA+TGG | 0.372920 | 1.1:+73845008 | None:intergenic |
| GATCGCCTGTGATTTGTTCC+AGG | 0.376842 | 1.1:+73845123 | None:intergenic |
| GTTAACAACGTTGGCATCAT+TGG | 0.378467 | 1.1:+73844898 | None:intergenic |
| TCCGTGGGTCTTTCAGAAAC+AGG | 0.382345 | 1.1:+73844923 | None:intergenic |
| GCACACCTAGTGGGTCATTT+GGG | 0.393611 | 1.1:-73843609 | MS.gene95812:CDS |
| GTGGTGGTGATGGCGGTGAA+TGG | 0.397278 | 1.1:+73845018 | None:intergenic |
| GATCCCGAAGATACTGCTTT+GGG | 0.399067 | 1.1:-73844965 | MS.gene95812:CDS |
| GTGAAGCTCCATGCCTCAAA+TGG | 0.403278 | 1.1:-73840897 | MS.gene95812:CDS |
| TCAATGGGAAGGGTAACTTT+TGG | 0.406930 | 1.1:+73840795 | None:intergenic |
| TACCTGTTTGAGCGACTTGA+AGG | 0.408154 | 1.1:+73843293 | None:intergenic |
| GGATCCCGAAGATACTGCTT+TGG | 0.413616 | 1.1:-73844966 | MS.gene95812:CDS |
| GCGGAGGTTGAGGAGGGTGG+TGG | 0.414332 | 1.1:+73844999 | None:intergenic |
| AAGTCCCAAAGCAGTATCTT+CGG | 0.424966 | 1.1:+73844961 | None:intergenic |
| TTTGAGGCATGGAGCTTCAC+TGG | 0.425496 | 1.1:+73840900 | None:intergenic |
| ACATCTTTACCTACCTTATC+CGG | 0.425799 | 1.1:+73843535 | None:intergenic |
| TATAAAAGATGTAGAGGGTC+AGG | 0.427753 | 1.1:-73841155 | MS.gene95812:intron |
| TGATGGAGTTTCGCCGGATA+AGG | 0.433029 | 1.1:-73843548 | MS.gene95812:intron |
| GGAAGCACAGCTCGTGATGC+TGG | 0.446112 | 1.1:-73842191 | MS.gene95812:intron |
| ACGACTTGAATTCCCATTTG+AGG | 0.447514 | 1.1:+73840884 | None:intergenic |
| ATCCTTCAAGTCGCTCAAAC+AGG | 0.448349 | 1.1:-73843295 | MS.gene95812:intron |
| AGTTGTTACCTTTATCTTTG+AGG | 0.457102 | 1.1:+73845430 | None:intergenic |
| AAAGCCTTCGGCGGAGGTTG+AGG | 0.462001 | 1.1:+73844989 | None:intergenic |
| GAGGGTGGTGGTGGTGATGG+CGG | 0.465413 | 1.1:+73845011 | None:intergenic |
| GCCAACGTTGTTAACCCTCC+CGG | 0.470865 | 1.1:-73844890 | MS.gene95812:CDS |
| CCTTTATCATTCAAATCAAT+GGG | 0.472367 | 1.1:+73840780 | None:intergenic |
| TGAAGGATTGTTGTGTCAGT+AGG | 0.473687 | 1.1:+73843310 | None:intergenic |
| TTTATTTGAAGGATTATCCT+GGG | 0.483950 | 1.1:+73843390 | None:intergenic |
| GGATCCAAAGCCTTCGGCGG+AGG | 0.495977 | 1.1:+73844983 | None:intergenic |
| GCCTTCGGCGGAGGTTGAGG+AGG | 0.498126 | 1.1:+73844992 | None:intergenic |
| CTTTGAGAGAAATCACCTGC+TGG | 0.508162 | 1.1:+73845101 | None:intergenic |
| CTGGAAACTAGAGGCAGTCT+AGG | 0.512274 | 1.1:+73840837 | None:intergenic |
| TATCATTCAAATCAATGGGA+AGG | 0.514085 | 1.1:+73840784 | None:intergenic |
| CCCTCCTCAACCTCCGCCGA+AGG | 0.515746 | 1.1:-73844993 | MS.gene95812:CDS |
| AAATGTCATCTTCAGTGAGT+TGG | 0.516724 | 1.1:+73845484 | None:intergenic |
| TTGAATTCCCATTTGAGGCA+TGG | 0.517522 | 1.1:+73840889 | None:intergenic |
| AGTCCCAAAGCAGTATCTTC+GGG | 0.521983 | 1.1:+73844962 | None:intergenic |
| GTTGGCATCATTGGTTTCCG+TGG | 0.522851 | 1.1:+73844907 | None:intergenic |
| GTGATGGCGGTGAATGGCGG+AGG | 0.524011 | 1.1:+73845024 | None:intergenic |
| TCTTCAGTGAGTTGGTTAAG+AGG | 0.524819 | 1.1:+73845492 | None:intergenic |
| ACACCAACGCCGACGGTAGC+CGG | 0.528495 | 1.1:+73845049 | None:intergenic |
| TGAAGCTCCATGCCTCAAAT+GGG | 0.529697 | 1.1:-73840896 | MS.gene95812:CDS |
| TCGGCGGAGGTTGAGGAGGG+TGG | 0.532423 | 1.1:+73844996 | None:intergenic |
| AGGCATGGAGCTTCACTGGA+AGG | 0.532614 | 1.1:+73840904 | None:intergenic |
| CCTCTGCATTACAGGGAGAA+AGG | 0.534355 | 1.1:-73842212 | MS.gene95812:CDS |
| TCTTCGGGATCCAAAGCCTT+CGG | 0.534680 | 1.1:+73844977 | None:intergenic |
| GTGGTGATGGCGGTGAATGG+CGG | 0.537319 | 1.1:+73845021 | None:intergenic |
| CTTTCTCCCTGTAATGCAGA+GGG | 0.537471 | 1.1:+73842213 | None:intergenic |
| ATCATTCAAATCAATGGGAA+GGG | 0.540719 | 1.1:+73840785 | None:intergenic |
| GAAGGATTGTTGTGTCAGTA+GGG | 0.541726 | 1.1:+73843311 | None:intergenic |
| GTTAAGAGGTCTGTCGAGGA+TGG | 0.553244 | 1.1:+73845506 | None:intergenic |
| TGAAGGATTATCCTGGGGAA+AGG | 0.554218 | 1.1:+73843396 | None:intergenic |
| CAAATCACAGGCGATCCAGC+AGG | 0.554699 | 1.1:-73845116 | MS.gene95812:CDS |
| ATGTCCGTCCTCCTTTCCCC+AGG | 0.560265 | 1.1:-73843407 | MS.gene95812:CDS |
| GAGGTCTGTCGAGGATGGAT+CGG | 0.562371 | 1.1:+73845511 | None:intergenic |
| CCTTTCTCCCTGTAATGCAG+AGG | 0.565241 | 1.1:+73842212 | None:intergenic |
| GCCTGTGATTTGTTCCAGGA+AGG | 0.565338 | 1.1:+73845127 | None:intergenic |
| CCAACGTTGTTAACCCTCCC+GGG | 0.565503 | 1.1:-73844889 | MS.gene95812:intron |
| TGTCTATGATGGAGTTTCGC+CGG | 0.565522 | 1.1:-73843554 | MS.gene95812:CDS |
| TTGGCATCATTGGTTTCCGT+GGG | 0.565795 | 1.1:+73844908 | None:intergenic |
| ACACCGGCTACCGTCGGCGT+TGG | 0.567567 | 1.1:-73845052 | MS.gene95812:CDS |
| GCCTTCCTGGAACAAATCAC+AGG | 0.567775 | 1.1:-73845128 | MS.gene95812:CDS |
| CCTTCGGCGGAGGTTGAGGA+GGG | 0.574219 | 1.1:+73844993 | None:intergenic |
| ACCTGTTTCTGAAAGACCCA+CGG | 0.575091 | 1.1:-73844924 | MS.gene95812:CDS |
| GAGGATGGATCGGAAGGAAA+CGG | 0.575789 | 1.1:+73845521 | None:intergenic |
| TCGAAGGGCAAGAAACTGAC+TGG | 0.582148 | 1.1:-73840960 | MS.gene95812:CDS |
| GTGTTCGTACAGGGATGCGC+AGG | 0.586574 | 1.1:-73845150 | MS.gene95812:intron |
| GGTAAGGTGAATGTCTATGA+TGG | 0.592087 | 1.1:-73843565 | MS.gene95812:CDS |
| CACAGAGGGTGCACACCTAG+TGG | 0.593532 | 1.1:-73843619 | MS.gene95812:intron |
| AGAGGCAGTCTAGGCTGTGG+TGG | 0.596317 | 1.1:+73840846 | None:intergenic |
| GGAATACCCTCTGCATTACA+GGG | 0.598431 | 1.1:-73842219 | MS.gene95812:CDS |
| TTATCCTGGGGAAAGGAGGA+CGG | 0.604225 | 1.1:+73843403 | None:intergenic |
| AGGATTATCCTGGGGAAAGG+AGG | 0.608359 | 1.1:+73843399 | None:intergenic |
| TTATCAATAGGTAAGTTGCA+AGG | 0.614238 | 1.1:+73843346 | None:intergenic |
| TCTGTCGAGGATGGATCGGA+AGG | 0.617863 | 1.1:+73845515 | None:intergenic |
| ACCTACTGACGATGATACAC+CGG | 0.620314 | 1.1:-73845068 | MS.gene95812:CDS |
| ACTAGAGGCAGTCTAGGCTG+TGG | 0.622722 | 1.1:+73840843 | None:intergenic |
| GCGATATCTTGAAAAGCGAA+AGG | 0.632146 | 1.1:-73841110 | MS.gene95812:CDS |
| GGAGGAGACACCAACGCCGA+CGG | 0.632850 | 1.1:+73845042 | None:intergenic |
| AATGGAGAACAGACCCGGGA+GGG | 0.635558 | 1.1:+73844876 | None:intergenic |
| CCCGGGAGGGTTAACAACGT+TGG | 0.637856 | 1.1:+73844889 | None:intergenic |
| AGACTGCCTCTAGTTTCCAG+TGG | 0.639013 | 1.1:-73840834 | MS.gene95812:CDS |
| GATGATACACCGGCTACCGT+CGG | 0.644121 | 1.1:-73845058 | MS.gene95812:CDS |
| ATCTTGAAAAGCGAAAGGAC+AGG | 0.644523 | 1.1:-73841105 | MS.gene95812:intron |
| CCGTAATCGGAAACGATGAA+CGG | 0.646115 | 1.1:-73845552 | None:intergenic |
| ACAGAGGGTGCACACCTAGT+GGG | 0.649773 | 1.1:-73843618 | MS.gene95812:intron |
| TCGGGATCCAAAGCCTTCGG+CGG | 0.652180 | 1.1:+73844980 | None:intergenic |
| ATTTGCCCAAATGACCCACT+AGG | 0.656723 | 1.1:+73843604 | None:intergenic |
| TTATTTGAAGGATTATCCTG+GGG | 0.659271 | 1.1:+73843391 | None:intergenic |
| GCCGGTGTATCATCGTCAGT+AGG | 0.662569 | 1.1:+73845067 | None:intergenic |
| GCTGAGCCACTGGAAACTAG+AGG | 0.668085 | 1.1:+73840828 | None:intergenic |
| GTTGGTTAAGAGGTCTGTCG+AGG | 0.685077 | 1.1:+73845502 | None:intergenic |
| AAATGGAGAACAGACCCGGG+AGG | 0.721352 | 1.1:+73844875 | None:intergenic |
| TAATCGGAAACGATGAACGG+CGG | 0.758813 | 1.1:-73845549 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATAAAAAAAATGAAATGA+TGG | - | chr1.1:73841607-73841626 | MS.gene95812:intron | 10.0% |
| !! | TTAATGTAATTAAATTAGTT+GGG | - | chr1.1:73841083-73841102 | MS.gene95812:intron | 10.0% |
| !! | TTTAATGTAATTAAATTAGT+TGG | - | chr1.1:73841082-73841101 | MS.gene95812:intron | 10.0% |
| !!! | TATCTAAAGTAATAATTAAA+TGG | + | chr1.1:73842135-73842154 | None:intergenic | 10.0% |
| !!! | TTATTTATTTGTTTAGAATT+AGG | - | chr1.1:73841762-73841781 | MS.gene95812:intron | 10.0% |
| !!! | TTTAATATCATCTATATTTT+GGG | - | chr1.1:73841998-73842017 | MS.gene95812:intron | 10.0% |
| !! | AAAAAAACATGAAAGAAAAA+TGG | + | chr1.1:73841459-73841478 | None:intergenic | 15.0% |
| !! | AATTTAATACATACATCAAA+AGG | + | chr1.1:73844943-73844962 | None:intergenic | 15.0% |
| !! | ATAATTAACAAAACTAACAT+TGG | + | chr1.1:73842635-73842654 | None:intergenic | 15.0% |
| !! | TAACCTAAAATAATCATTTA+GGG | + | chr1.1:73842202-73842221 | None:intergenic | 15.0% |
| !! | TTAACCTAAAATAATCATTT+AGG | + | chr1.1:73842203-73842222 | None:intergenic | 15.0% |
| !!! | ATAGCTTTAATTCAAAAAAT+CGG | + | chr1.1:73843664-73843683 | None:intergenic | 15.0% |
| !!! | ATGATCATTTTGTATATTAA+AGG | - | chr1.1:73842225-73842244 | MS.gene95812:CDS | 15.0% |
| !!! | CTTTAATATCATCTATATTT+TGG | - | chr1.1:73841997-73842016 | MS.gene95812:intron | 15.0% |
| !!! | GTTTAATTATTTTTTTGTGT+TGG | - | chr1.1:73841488-73841507 | MS.gene95812:intron | 15.0% |
| !!! | TCATATTTAATTGTTGTTTA+CGG | - | chr1.1:73842041-73842060 | MS.gene95812:intron | 15.0% |
| !!! | TTTTGATGTATGTATTAAAT+TGG | - | chr1.1:73844942-73844961 | MS.gene95812:CDS | 15.0% |
| !! | AATAAATATTACCGATACTT+AGG | + | chr1.1:73845134-73845153 | None:intergenic | 20.0% |
| !! | AGAGTAATAAAATAATTCAG+CGG | + | chr1.1:73845317-73845336 | None:intergenic | 20.0% |
| !! | ATACAAGTATGGTTAATTAT+TGG | + | chr1.1:73842852-73842871 | None:intergenic | 20.0% |
| !! | ATTCCTTAAAACTAAAAAAG+TGG | + | chr1.1:73845292-73845311 | None:intergenic | 20.0% |
| !! | ATTGGAGTACAAAAATTAAA+TGG | + | chr1.1:73841034-73841053 | None:intergenic | 20.0% |
| !! | TAATTCAAAAAATCGGTATT+CGG | + | chr1.1:73843657-73843676 | None:intergenic | 20.0% |
| !! | TACAAGTATGGTTAATTATT+GGG | + | chr1.1:73842851-73842870 | None:intergenic | 20.0% |
| !! | TGAATTAATGCAAAAATCAT+TGG | - | chr1.1:73843774-73843793 | MS.gene95812:intron | 20.0% |
| !! | TTTATCTGTAAAACCAAATT+TGG | + | chr1.1:73844070-73844089 | None:intergenic | 20.0% |
| !!! | AAACCCTAAATGATTATTTT+AGG | - | chr1.1:73842196-73842215 | MS.gene95812:CDS | 20.0% |
| !!! | AAGATGTTTAACTTCATAAT+TGG | - | chr1.1:73844040-73844059 | MS.gene95812:intron | 20.0% |
| !!! | ATTTGGTTTTACAGATAAAA+TGG | - | chr1.1:73844071-73844090 | MS.gene95812:intron | 20.0% |
| !!! | CTTTTACTTGTTTAAAATCA+TGG | - | chr1.1:73843897-73843916 | MS.gene95812:intron | 20.0% |
| !!! | TATTTGTTTAGAATTAGGTT+GGG | - | chr1.1:73841767-73841786 | MS.gene95812:intron | 20.0% |
| !!! | TGATAGTGATTTATGTATTT+GGG | - | chr1.1:73844793-73844812 | MS.gene95812:intron | 20.0% |
| !!! | TGTTTTATAAAAGATGTAGA+GGG | - | chr1.1:73845154-73845173 | MS.gene95812:intron | 20.0% |
| !!! | TTACCACTTTTTTAGTTTTA+AGG | - | chr1.1:73845286-73845305 | MS.gene95812:intron | 20.0% |
| !!! | TTATTTGTTTAGAATTAGGT+TGG | - | chr1.1:73841766-73841785 | MS.gene95812:intron | 20.0% |
| !!! | TTGATAGTGATTTATGTATT+TGG | - | chr1.1:73844792-73844811 | MS.gene95812:intron | 20.0% |
| !!! | TTGTTTTATAAAAGATGTAG+AGG | - | chr1.1:73845153-73845172 | MS.gene95812:intron | 20.0% |
| !!! | TTTGTTATCTTTTGTTTCTT+GGG | - | chr1.1:73841532-73841551 | MS.gene95812:intron | 20.0% |
| !!! | TTTTTACTCGTTTAAAATCA+TGG | - | chr1.1:73844000-73844019 | MS.gene95812:intron | 20.0% |
| ! | AAATAAAAATGCAGCAGTTT+GGG | - | chr1.1:73842940-73842959 | MS.gene95812:intron | 25.0% |
| ! | AAATTCCACATTAACAAAAC+TGG | + | chr1.1:73842345-73842364 | None:intergenic | 25.0% |
| ! | AAGAAGACTTCTTTATCAAT+AGG | + | chr1.1:73842983-73843002 | None:intergenic | 25.0% |
| ! | AATTATGAGAACCTAAGTAT+CGG | - | chr1.1:73845120-73845139 | MS.gene95812:CDS | 25.0% |
| ! | ACATAAATCACTATCAATCT+CGG | + | chr1.1:73844789-73844808 | None:intergenic | 25.0% |
| ! | ACCTTTATCATTCAAATCAA+TGG | + | chr1.1:73845538-73845557 | None:intergenic | 25.0% |
| ! | CCTTTATCATTCAAATCAAT+GGG | + | chr1.1:73845537-73845556 | None:intergenic | 25.0% |
| ! | CTATCAACAAATTATCTACT+TGG | + | chr1.1:73844232-73844251 | None:intergenic | 25.0% |
| ! | GAAATATGAAGAAATCTTGT+GGG | - | chr1.1:73844876-73844895 | MS.gene95812:intron | 25.0% |
| ! | GAGTAATAAAATAATTCAGC+GGG | + | chr1.1:73845316-73845335 | None:intergenic | 25.0% |
| ! | GGTGAAATTTAATTGATGTA+TGG | + | chr1.1:73842827-73842846 | None:intergenic | 25.0% |
| ! | GTTCAAGTCAAATATTAGAT+CGG | + | chr1.1:73843546-73843565 | None:intergenic | 25.0% |
| ! | TGAAATATGAAGAAATCTTG+TGG | - | chr1.1:73844875-73844894 | MS.gene95812:intron | 25.0% |
| ! | TGACTATTATTACTACCAAT+TGG | + | chr1.1:73842377-73842396 | None:intergenic | 25.0% |
| ! | TTATTGAAAATAGGTGTTCT+AGG | + | chr1.1:73843481-73843500 | None:intergenic | 25.0% |
| ! | TTTAGATATCATGTTTGAAG+TGG | - | chr1.1:73842147-73842166 | MS.gene95812:intron | 25.0% |
| ! | TTTATTTGAAGGATTATCCT+GGG | + | chr1.1:73842927-73842946 | None:intergenic | 25.0% |
| ! | TTTGTGTAAAATATGACTGA+AGG | - | chr1.1:73842605-73842624 | MS.gene95812:intron | 25.0% |
| !! | ATATAGAAAGTATGAAGCAT+TGG | + | chr1.1:73841052-73841071 | None:intergenic | 25.0% |
| !! | GAGTTGATTATAGCATAATT+TGG | - | chr1.1:73841710-73841729 | MS.gene95812:intron | 25.0% |
| !! | TCTAATAGTAGCAATTTTAC+TGG | + | chr1.1:73844576-73844595 | None:intergenic | 25.0% |
| !! | TTAGATATCATGTTTGAAGT+GGG | - | chr1.1:73842148-73842167 | MS.gene95812:intron | 25.0% |
| !! | TTTATTACTCTGCCTTTTTA+GGG | - | chr1.1:73845326-73845345 | MS.gene95812:intron | 25.0% |
| !! | TTTTATCTTGTGTTCTCTTT+TGG | - | chr1.1:73844189-73844208 | MS.gene95812:intron | 25.0% |
| !! | TTTTATTACTCTGCCTTTTT+AGG | - | chr1.1:73845325-73845344 | MS.gene95812:intron | 25.0% |
| !!! | AAGTGCAGTTTTTAGTTTAA+TGG | + | chr1.1:73842459-73842478 | None:intergenic | 25.0% |
| !!! | CAATGACTTGTTTAAAATCA+TGG | - | chr1.1:73843721-73843740 | MS.gene95812:intron | 25.0% |
| !!! | CTATTTTTCTACGTTAGTTT+TGG | - | chr1.1:73844489-73844508 | MS.gene95812:intron | 25.0% |
| !!! | GTTTGTTATCTTTTGTTTCT+TGG | - | chr1.1:73841531-73841550 | MS.gene95812:intron | 25.0% |
| !!! | TCTAGATATTTGATAATGAC+AGG | + | chr1.1:73841968-73841987 | None:intergenic | 25.0% |
| !!! | TTTATAGCTTTATGTGAAGT+GGG | - | chr1.1:73841805-73841824 | MS.gene95812:intron | 25.0% |
| !!! | TTTTATAGCTTTATGTGAAG+TGG | - | chr1.1:73841804-73841823 | MS.gene95812:intron | 25.0% |
| !!! | TTTTATTTGAAGGATTATCC+TGG | + | chr1.1:73842928-73842947 | None:intergenic | 25.0% |
| !!! | TTTTTTCATGCATACTTTTC+TGG | - | chr1.1:73843114-73843133 | MS.gene95812:intron | 25.0% |
| AAGTATGGTTAATTATTGGG+AGG | + | chr1.1:73842848-73842867 | None:intergenic | 30.0% | |
| AATTATCACAATCCAACACA+TGG | - | chr1.1:73843444-73843463 | MS.gene95812:intron | 30.0% | |
| ACCAATGTTAAGAACTTGAA+TGG | + | chr1.1:73842658-73842677 | None:intergenic | 30.0% | |
| ACTTAGGTTCTCATAATTTG+AGG | + | chr1.1:73845118-73845137 | None:intergenic | 30.0% | |
| AGCAGTAACTTTATAACACA+AGG | + | chr1.1:73844471-73844490 | None:intergenic | 30.0% | |
| AGTTGTTACCTTTATCTTTG+AGG | + | chr1.1:73840887-73840906 | None:intergenic | 30.0% | |
| ATCATTCAAATCAATGGGAA+GGG | + | chr1.1:73845532-73845551 | None:intergenic | 30.0% | |
| ATGCTATCAAACTATCAAAC+TGG | + | chr1.1:73843521-73843540 | None:intergenic | 30.0% | |
| ATGGAATCAAGAGATGTTAA+AGG | + | chr1.1:73842440-73842459 | None:intergenic | 30.0% | |
| ATTAAATGGAAGTTGTTCTC+AGG | + | chr1.1:73841020-73841039 | None:intergenic | 30.0% | |
| ATTGACATATATTGCAACAG+AGG | + | chr1.1:73844624-73844643 | None:intergenic | 30.0% | |
| CAAATAAAAATGCAGCAGTT+TGG | - | chr1.1:73842939-73842958 | MS.gene95812:intron | 30.0% | |
| CATAAATCACTATCAATCTC+GGG | + | chr1.1:73844788-73844807 | None:intergenic | 30.0% | |
| CATGACTTCAACAATGAATA+TGG | - | chr1.1:73842309-73842328 | MS.gene95812:intron | 30.0% | |
| CATGGTAACATTTGTAAGTT+AGG | - | chr1.1:73843739-73843758 | MS.gene95812:intron | 30.0% | |
| GAATTTCTTTCAGTTCCAAT+TGG | - | chr1.1:73842359-73842378 | MS.gene95812:intron | 30.0% | |
| GAGTGGATGGAAAATATTTA+GGG | - | chr1.1:73841887-73841906 | MS.gene95812:intron | 30.0% | |
| TAATGTTTAGTGAGAGTGAA+GGG | - | chr1.1:73841675-73841694 | MS.gene95812:intron | 30.0% | |
| TACAGATGATTCCAATTAAG+CGG | - | chr1.1:73844266-73844285 | MS.gene95812:intron | 30.0% | |
| TATCATTCAAATCAATGGGA+AGG | + | chr1.1:73845533-73845552 | None:intergenic | 30.0% | |
| TTAACCATACTTGTATTTGC+AGG | - | chr1.1:73842856-73842875 | MS.gene95812:intron | 30.0% | |
| TTAATGTTTAGTGAGAGTGA+AGG | - | chr1.1:73841674-73841693 | MS.gene95812:intron | 30.0% | |
| TTAGAGTACATGAGTATTTC+TGG | - | chr1.1:73844591-73844610 | MS.gene95812:intron | 30.0% | |
| TTATCAATAGGTAAGTTGCA+AGG | + | chr1.1:73842971-73842990 | None:intergenic | 30.0% | |
| TTATTTGAAGGATTATCCTG+GGG | + | chr1.1:73842926-73842945 | None:intergenic | 30.0% | |
| ! | AATGTGTGTTGATATATGGA+AGG | - | chr1.1:73841850-73841869 | MS.gene95812:intron | 30.0% |
| ! | ACCTATTTTCAATAACCACA+CGG | - | chr1.1:73843486-73843505 | MS.gene95812:intron | 30.0% |
| ! | AGTTTGATAGTTTGATAGCA+TGG | - | chr1.1:73843520-73843539 | MS.gene95812:intron | 30.0% |
| ! | CAAATGACAATTTTCTACTG+TGG | - | chr1.1:73842728-73842747 | MS.gene95812:intron | 30.0% |
| ! | CATAATTGGTGTTCCAAATT+TGG | - | chr1.1:73844054-73844073 | MS.gene95812:intron | 30.0% |
| ! | GATGAATGTGTGTTGATATA+TGG | - | chr1.1:73841846-73841865 | MS.gene95812:intron | 30.0% |
| ! | TCCATTCAAGTTCTTAACAT+TGG | - | chr1.1:73842654-73842673 | MS.gene95812:intron | 30.0% |
| ! | TCTTTTAGCCAGGTAATATA+CGG | + | chr1.1:73844831-73844850 | None:intergenic | 30.0% |
| ! | TTATTACTCTGCCTTTTTAG+GGG | - | chr1.1:73845327-73845346 | MS.gene95812:intron | 30.0% |
| ! | TTGAGCTTTTCTTTGTTACT+GGG | - | chr1.1:73841915-73841934 | MS.gene95812:intron | 30.0% |
| ! | TTTGAGCTTTTCTTTGTTAC+TGG | - | chr1.1:73841914-73841933 | MS.gene95812:intron | 30.0% |
| !! | AAAAGCTTTTTCCACTAGAT+AGG | + | chr1.1:73844427-73844446 | None:intergenic | 30.0% |
| !! | ACTGCTGCATTTTTATTTGA+AGG | + | chr1.1:73842938-73842957 | None:intergenic | 30.0% |
| !! | CCCATTGATTTGAATGATAA+AGG | - | chr1.1:73845534-73845553 | MS.gene95812:CDS | 30.0% |
| !! | TGGTTTTACAGATAAAATGG+TGG | - | chr1.1:73844074-73844093 | MS.gene95812:intron | 30.0% |
| !! | TTAGAATTAGGTTGGGAAAT+TGG | - | chr1.1:73841774-73841793 | MS.gene95812:intron | 30.0% |
| !!! | AATTGCCAGTTTTGTTAATG+TGG | - | chr1.1:73842337-73842356 | MS.gene95812:intron | 30.0% |
| AAATGTCATCTTCAGTGAGT+TGG | + | chr1.1:73840833-73840852 | None:intergenic | 35.0% | |
| AAGATCACAATAGCATGACT+TGG | + | chr1.1:73844315-73844334 | None:intergenic | 35.0% | |
| AATTGATCATGTGTCAGTAC+CGG | - | chr1.1:73844653-73844672 | MS.gene95812:intron | 35.0% | |
| ACAGATGATTCCAATTAAGC+GGG | - | chr1.1:73844267-73844286 | MS.gene95812:intron | 35.0% | |
| ACATCTTTACCTACCTTATC+CGG | + | chr1.1:73842782-73842801 | None:intergenic | 35.0% | |
| ACTAAAAAAGTGGTAACACG+AGG | + | chr1.1:73845282-73845301 | None:intergenic | 35.0% | |
| ACTAGATAGGATAGGAAACA+GGG | + | chr1.1:73844414-73844433 | None:intergenic | 35.0% | |
| AGATCACAATAGCATGACTT+GGG | + | chr1.1:73844314-73844333 | None:intergenic | 35.0% | |
| CAAACAGGTAGTTAGCAATT+GGG | - | chr1.1:73843034-73843053 | MS.gene95812:intron | 35.0% | |
| CATCCCAGTGATTTAAAAAC+CGG | + | chr1.1:73843606-73843625 | None:intergenic | 35.0% | |
| CTAAAAAAGTGGTAACACGA+GGG | + | chr1.1:73845281-73845300 | None:intergenic | 35.0% | |
| CTATAGCAGTAGTGTATAAG+AGG | - | chr1.1:73844914-73844933 | MS.gene95812:CDS | 35.0% | |
| GAAGAAGAAAGAGAAAGAGA+AGG | + | chr1.1:73840912-73840931 | None:intergenic | 35.0% | |
| GGAGTGGATGGAAAATATTT+AGG | - | chr1.1:73841886-73841905 | MS.gene95812:intron | 35.0% | |
| GGATGCCAAGAAAAAAACAA+AGG | + | chr1.1:73844293-73844312 | None:intergenic | 35.0% | |
| TAAAATCATGGCATCTAGTC+AGG | - | chr1.1:73844012-73844031 | MS.gene95812:intron | 35.0% | |
| TATAAAAGATGTAGAGGGTC+AGG | - | chr1.1:73845159-73845178 | MS.gene95812:intron | 35.0% | |
| TCAAACAGGTAGTTAGCAAT+TGG | - | chr1.1:73843033-73843052 | MS.gene95812:intron | 35.0% | |
| TGAGATTGTCAGTACTTTGA+TGG | + | chr1.1:73842093-73842112 | None:intergenic | 35.0% | |
| TGTGACTATGTCATAGTCAA+TGG | + | chr1.1:73843230-73843249 | None:intergenic | 35.0% | |
| TTATGCCATTCTTTGTTGGA+AGG | - | chr1.1:73842477-73842496 | MS.gene95812:intron | 35.0% | |
| ! | ACATGCATGGAATCTTTTGA+AGG | + | chr1.1:73844710-73844729 | None:intergenic | 35.0% |
| ! | ACGCATATTTTGTACATGCA+TGG | + | chr1.1:73844723-73844742 | None:intergenic | 35.0% |
| ! | ATGTACAAGTTCTTTTAGCC+AGG | + | chr1.1:73844841-73844860 | None:intergenic | 35.0% |
| ! | CATGCATGGAATCTTTTGAA+GGG | + | chr1.1:73844709-73844728 | None:intergenic | 35.0% |
| ! | CCTATTTTCAATAACCACAC+GGG | - | chr1.1:73843487-73843506 | MS.gene95812:intron | 35.0% |
| ! | CTTTTAGCCAGGTAATATAC+GGG | + | chr1.1:73844830-73844849 | None:intergenic | 35.0% |
| ! | CTTTTTCCACTAGATAGGAT+AGG | + | chr1.1:73844422-73844441 | None:intergenic | 35.0% |
| ! | GACAATTTTCTACTGTGGTA+AGG | - | chr1.1:73842733-73842752 | MS.gene95812:intron | 35.0% |
| ! | GGTTCTCATAATTTGAGGTA+TGG | + | chr1.1:73845113-73845132 | None:intergenic | 35.0% |
| ! | GTTGAGCTTGTTCATCTTAT+AGG | + | chr1.1:73843699-73843718 | None:intergenic | 35.0% |
| !! | CTGAAAAAAGTGTTGCGTTA+GGG | - | chr1.1:73842404-73842423 | MS.gene95812:intron | 35.0% |
| AAAACAAAGGCCCGCTTAAT+TGG | + | chr1.1:73844280-73844299 | None:intergenic | 40.0% | |
| AAATTTGATGCGAGCACAGA+GGG | - | chr1.1:73842681-73842700 | MS.gene95812:intron | 40.0% | |
| AAGCTCGTGAATTCCAAAGT+GGG | + | chr1.1:73844523-73844542 | None:intergenic | 40.0% | |
| AAGTCCCAAAGCAGTATCTT+CGG | + | chr1.1:73841356-73841375 | None:intergenic | 40.0% | |
| ACGACTTGAATTCCCATTTG+AGG | + | chr1.1:73845433-73845452 | None:intergenic | 40.0% | |
| ACTGGGATGTATGTATTCTG+TGG | - | chr1.1:73841932-73841951 | MS.gene95812:intron | 40.0% | |
| ACTTGAACCGATTATCCCTT+CGG | - | chr1.1:73843558-73843577 | MS.gene95812:CDS | 40.0% | |
| AGAAAAATGGAGAACAGACC+CGG | + | chr1.1:73841446-73841465 | None:intergenic | 40.0% | |
| AGACTCCTTCCAACAAAGAA+TGG | + | chr1.1:73842485-73842504 | None:intergenic | 40.0% | |
| AGGTATGGAAGCTTGATACA+GGG | + | chr1.1:73845098-73845117 | None:intergenic | 40.0% | |
| ATCGGTATTCGGAGTGAATT+TGG | + | chr1.1:73843646-73843665 | None:intergenic | 40.0% | |
| ATCTTGAAAAGCGAAAGGAC+AGG | - | chr1.1:73845209-73845228 | MS.gene95812:intron | 40.0% | |
| ATGGAAGGTGAATCTGTTTG+TGG | - | chr1.1:73841865-73841884 | MS.gene95812:intron | 40.0% | |
| ATTCTTTGTTGGAAGGAGTC+TGG | - | chr1.1:73842484-73842503 | MS.gene95812:intron | 40.0% | |
| CACTAGATAGGATAGGAAAC+AGG | + | chr1.1:73844415-73844434 | None:intergenic | 40.0% | |
| CAGTGATTTAAAAACCGGCT+CGG | + | chr1.1:73843601-73843620 | None:intergenic | 40.0% | |
| CATGGCAACATCTACAAGTT+AGG | - | chr1.1:73843915-73843934 | MS.gene95812:intron | 40.0% | |
| CCCGTGTGGTTATTGAAAAT+AGG | + | chr1.1:73843490-73843509 | None:intergenic | 40.0% | |
| CGCAGATTCCTCAAAGATAA+AGG | - | chr1.1:73840876-73840895 | MS.gene95812:CDS | 40.0% | |
| CTGTTTCCTATCCTATCTAG+TGG | - | chr1.1:73844413-73844432 | MS.gene95812:intron | 40.0% | |
| GAAGGATTGTTGTGTCAGTA+GGG | + | chr1.1:73843006-73843025 | None:intergenic | 40.0% | |
| GATAGGAAACAGGGATCAAA+TGG | + | chr1.1:73844405-73844424 | None:intergenic | 40.0% | |
| GCACTTATGCCATTCTTTGT+TGG | - | chr1.1:73842473-73842492 | MS.gene95812:intron | 40.0% | |
| GCGATATCTTGAAAAGCGAA+AGG | - | chr1.1:73845204-73845223 | MS.gene95812:intron | 40.0% | |
| GCTAGATATCAACTGAGAGA+AGG | - | chr1.1:73842172-73842191 | MS.gene95812:intron | 40.0% | |
| GGTAAGGTGAATGTCTATGA+TGG | - | chr1.1:73842749-73842768 | MS.gene95812:intron | 40.0% | |
| GTATGATAAGCACTTGCAGA+AGG | - | chr1.1:73843158-73843177 | MS.gene95812:intron | 40.0% | |
| GTTAACAACGTTGGCATCAT+TGG | + | chr1.1:73841419-73841438 | None:intergenic | 40.0% | |
| TAAATTTGATGCGAGCACAG+AGG | - | chr1.1:73842680-73842699 | MS.gene95812:intron | 40.0% | |
| TAACTGCTGAATAGTAGCAC+CGG | + | chr1.1:73844675-73844694 | None:intergenic | 40.0% | |
| TGAAGGATTGTTGTGTCAGT+AGG | + | chr1.1:73843007-73843026 | None:intergenic | 40.0% | |
| TGACTGTGTCAGTATCATTC+CGG | + | chr1.1:73841580-73841599 | None:intergenic | 40.0% | |
| TGGAGCATGAGAGGATAAAA+TGG | + | chr1.1:73840985-73841004 | None:intergenic | 40.0% | |
| TGGCAAGATATTCATGCAAG+AGG | + | chr1.1:73842807-73842826 | None:intergenic | 40.0% | |
| TTACTGGAAGACATGCATGA+TGG | + | chr1.1:73844560-73844579 | None:intergenic | 40.0% | |
| TTCTTTGTTGGAAGGAGTCT+GGG | - | chr1.1:73842485-73842504 | MS.gene95812:intron | 40.0% | |
| TTGTTCATCTACGAGATGCA+TGG | + | chr1.1:73843972-73843991 | None:intergenic | 40.0% | |
| ! | AAATATACCAAGCGCTGTGT+TGG | - | chr1.1:73842270-73842289 | MS.gene95812:intron | 40.0% |
| ! | ACTTTGATGGCACTAAAACC+CGG | + | chr1.1:73842080-73842099 | None:intergenic | 40.0% |
| ! | ATTTTCAATAACCACACGGG+AGG | - | chr1.1:73843490-73843509 | MS.gene95812:intron | 40.0% |
| ! | CAATCCAACACATGGTTTGT+TGG | - | chr1.1:73843452-73843471 | MS.gene95812:intron | 40.0% |
| ! | GTGAAGTGGGAGATGATTTT+TGG | - | chr1.1:73841818-73841837 | MS.gene95812:intron | 40.0% |
| ! | GTGCTACTATTCAGCAGTTA+CGG | - | chr1.1:73844675-73844694 | MS.gene95812:intron | 40.0% |
| ! | TCAATGGGAAGGGTAACTTT+TGG | + | chr1.1:73845522-73845541 | None:intergenic | 40.0% |
| ! | TTACGGTTTTCTCTTCATGC+CGG | - | chr1.1:73842058-73842077 | MS.gene95812:intron | 40.0% |
| ! | TTGAATTCCCATTTGAGGCA+TGG | + | chr1.1:73845428-73845447 | None:intergenic | 40.0% |
| ! | TTTTATCCTCTCATGCTCCA+TGG | - | chr1.1:73840985-73841004 | MS.gene95812:intron | 40.0% |
| !! | CCTGAAAAAAGTGTTGCGTT+AGG | - | chr1.1:73842403-73842422 | MS.gene95812:intron | 40.0% |
| !! | CTTTTTAGGGGAAGATCGAA+GGG | - | chr1.1:73845339-73845358 | MS.gene95812:intron | 40.0% |
| !! | GAGCCGGTTTTTAAATCACT+GGG | - | chr1.1:73843600-73843619 | MS.gene95812:CDS | 40.0% |
| !! | TCTTCAGTGAGTTGGTTAAG+AGG | + | chr1.1:73840825-73840844 | None:intergenic | 40.0% |
| !!! | CCTAACGCAACACTTTTTTC+AGG | + | chr1.1:73842406-73842425 | None:intergenic | 40.0% |
| ACCTACTGACGATGATACAC+CGG | - | chr1.1:73841246-73841265 | MS.gene95812:intron | 45.0% | |
| AGCTCGTGAATTCCAAAGTG+GGG | + | chr1.1:73844522-73844541 | None:intergenic | 45.0% | |
| AGGTGAATCTGTTTGTGGAG+TGG | - | chr1.1:73841870-73841889 | MS.gene95812:intron | 45.0% | |
| AGTCCCAAAGCAGTATCTTC+GGG | + | chr1.1:73841355-73841374 | None:intergenic | 45.0% | |
| ATCCTTCAAGTCGCTCAAAC+AGG | - | chr1.1:73843019-73843038 | MS.gene95812:intron | 45.0% | |
| ATGTGCACCCGTATATTACC+TGG | - | chr1.1:73844820-73844839 | MS.gene95812:intron | 45.0% | |
| ATTTGCCCAAATGACCCACT+AGG | + | chr1.1:73842713-73842732 | None:intergenic | 45.0% | |
| CATTAAACCAACACAGCGCT+TGG | + | chr1.1:73842280-73842299 | None:intergenic | 45.0% | |
| CCTTCGATCTTCCCCTAAAA+AGG | + | chr1.1:73845341-73845360 | None:intergenic | 45.0% | |
| CGTGCCTGCAAATACAAGTA+TGG | + | chr1.1:73842863-73842882 | None:intergenic | 45.0% | |
| CTTTCTCCCTGTAATGCAGA+GGG | + | chr1.1:73844104-73844123 | None:intergenic | 45.0% | |
| GAAAAATGGAGAACAGACCC+GGG | + | chr1.1:73841445-73841464 | None:intergenic | 45.0% | |
| GAAGCTCGTGAATTCCAAAG+TGG | + | chr1.1:73844524-73844543 | None:intergenic | 45.0% | |
| GAATCTGTTTGTGGAGTGGA+TGG | - | chr1.1:73841874-73841893 | MS.gene95812:intron | 45.0% | |
| GAGGTATGGAAGCTTGATAC+AGG | + | chr1.1:73845099-73845118 | None:intergenic | 45.0% | |
| GATCCCGAAGATACTGCTTT+GGG | - | chr1.1:73841349-73841368 | MS.gene95812:intron | 45.0% | |
| GGAATACCCTCTGCATTACA+GGG | - | chr1.1:73844095-73844114 | MS.gene95812:intron | 45.0% | |
| GTCACCAACAAACCATGTGT+TGG | + | chr1.1:73843459-73843478 | None:intergenic | 45.0% | |
| TACCTGTTTGAGCGACTTGA+AGG | + | chr1.1:73843024-73843043 | None:intergenic | 45.0% | |
| TGAAGCTCCATGCCTCAAAT+GGG | - | chr1.1:73845418-73845437 | MS.gene95812:intron | 45.0% | |
| TGAAGGATTATCCTGGGGAA+AGG | + | chr1.1:73842921-73842940 | None:intergenic | 45.0% | |
| TGGAATACCCTCTGCATTAC+AGG | - | chr1.1:73844094-73844113 | MS.gene95812:intron | 45.0% | |
| TGTCAGTATCATTCCGGTGT+CGG | + | chr1.1:73841574-73841593 | None:intergenic | 45.0% | |
| ! | ATGCTTAACCTGCACTGACA+TGG | - | chr1.1:73845000-73845019 | MS.gene95812:CDS | 45.0% |
| ! | CTTTGAGAGAAATCACCTGC+TGG | + | chr1.1:73841216-73841235 | None:intergenic | 45.0% |
| ! | TACGGTTTTCTCTTCATGCC+GGG | - | chr1.1:73842059-73842078 | MS.gene95812:intron | 45.0% |
| ! | TGTCTATGATGGAGTTTCGC+CGG | - | chr1.1:73842760-73842779 | MS.gene95812:intron | 45.0% |
| !! | ACCTGTTTCTGAAAGACCCA+CGG | - | chr1.1:73841390-73841409 | MS.gene95812:intron | 45.0% |
| !! | ATTTAAAAACCGGCTCGGAC+CGG | + | chr1.1:73843596-73843615 | None:intergenic | 45.0% |
| !! | CCTTTTTAGGGGAAGATCGA+AGG | - | chr1.1:73845338-73845357 | MS.gene95812:intron | 45.0% |
| !! | CGAGCCGGTTTTTAAATCAC+TGG | - | chr1.1:73843599-73843618 | MS.gene95812:CDS | 45.0% |
| !! | TTGGCATCATTGGTTTCCGT+GGG | + | chr1.1:73841409-73841428 | None:intergenic | 45.0% |
| !!! | GCGGGCCTTTGTTTTTTTCT+TGG | - | chr1.1:73844285-73844304 | MS.gene95812:intron | 45.0% |
| !! | TTTATTGAATTTAAATTATT+TGG | + | chr1.1:73842585-73842604 | None:intergenic | 5.0% |
| !!! | AAAAAAAAGTAAAATTTTAA+TGG | - | chr1.1:73841651-73841670 | MS.gene95812:intron | 5.0% |
| AAGACGACACGTGTTCGTAC+AGG | - | chr1.1:73841154-73841173 | MS.gene95812:intron | 50.0% | |
| AGACGACACGTGTTCGTACA+GGG | - | chr1.1:73841155-73841174 | MS.gene95812:intron | 50.0% | |
| AGGATTATCCTGGGGAAAGG+AGG | + | chr1.1:73842918-73842937 | None:intergenic | 50.0% | |
| CCAGGAACCGAAGGGATAAT+CGG | + | chr1.1:73843568-73843587 | None:intergenic | 50.0% | |
| CCTCTGCATTACAGGGAGAA+AGG | - | chr1.1:73844102-73844121 | MS.gene95812:intron | 50.0% | |
| CCTTTCTCCCTGTAATGCAG+AGG | + | chr1.1:73844105-73844124 | None:intergenic | 50.0% | |
| CTCTCATGCTCCATGGTTTC+CGG | - | chr1.1:73840992-73841011 | MS.gene95812:intron | 50.0% | |
| CTGGAAACTAGAGGCAGTCT+AGG | + | chr1.1:73845480-73845499 | None:intergenic | 50.0% | |
| GAGGATGGATCGGAAGGAAA+CGG | + | chr1.1:73840796-73840815 | None:intergenic | 50.0% | |
| GCCTTCCTGGAACAAATCAC+AGG | - | chr1.1:73841186-73841205 | MS.gene95812:intron | 50.0% | |
| GGATCCCGAAGATACTGCTT+TGG | - | chr1.1:73841348-73841367 | MS.gene95812:intron | 50.0% | |
| GTGAAGCTCCATGCCTCAAA+TGG | - | chr1.1:73845417-73845436 | MS.gene95812:intron | 50.0% | |
| GTTAAGAGGTCTGTCGAGGA+TGG | + | chr1.1:73840811-73840830 | None:intergenic | 50.0% | |
| GTTGGTTAAGAGGTCTGTCG+AGG | + | chr1.1:73840815-73840834 | None:intergenic | 50.0% | |
| TCATACCACCATGTCAGTGC+AGG | + | chr1.1:73845011-73845030 | None:intergenic | 50.0% | |
| TCCGTGGGTCTTTCAGAAAC+AGG | + | chr1.1:73841394-73841413 | None:intergenic | 50.0% | |
| TCGAAGGGCAAGAAACTGAC+TGG | - | chr1.1:73845354-73845373 | MS.gene95812:intron | 50.0% | |
| TCTTCGGGATCCAAAGCCTT+CGG | + | chr1.1:73841340-73841359 | None:intergenic | 50.0% | |
| TGATGGAGTTTCGCCGGATA+AGG | - | chr1.1:73842766-73842785 | MS.gene95812:intron | 50.0% | |
| TGGAAGTTGTTCTCAGGAGC+CGG | + | chr1.1:73841014-73841033 | None:intergenic | 50.0% | |
| TTATCCTGGGGAAAGGAGGA+CGG | + | chr1.1:73842914-73842933 | None:intergenic | 50.0% | |
| TTTGGATGTCAGCCCCACTT+TGG | - | chr1.1:73844507-73844526 | MS.gene95812:intron | 50.0% | |
| ! | AGACTGCCTCTAGTTTCCAG+TGG | - | chr1.1:73845480-73845499 | MS.gene95812:CDS | 50.0% |
| ! | ATCATTCCGGTGTCGGAGTT+AGG | + | chr1.1:73841567-73841586 | None:intergenic | 50.0% |
| ! | CTTAACCTGCACTGACATGG+TGG | - | chr1.1:73845003-73845022 | MS.gene95812:CDS | 50.0% |
| ! | GCACACCTAGTGGGTCATTT+GGG | - | chr1.1:73842705-73842724 | MS.gene95812:intron | 50.0% |
| ! | TCATTCCGGTGTCGGAGTTA+GGG | + | chr1.1:73841566-73841585 | None:intergenic | 50.0% |
| ! | TGCACACCTAGTGGGTCATT+TGG | - | chr1.1:73842704-73842723 | MS.gene95812:intron | 50.0% |
| ! | TGGGAAGGGTAACTTTTGGC+TGG | + | chr1.1:73845518-73845537 | None:intergenic | 50.0% |
| ! | TTGGAAGGAGTCTGGGTTAG+TGG | - | chr1.1:73842492-73842511 | MS.gene95812:intron | 50.0% |
| ! | TTTGAGGCATGGAGCTTCAC+TGG | + | chr1.1:73845417-73845436 | None:intergenic | 50.0% |
| !! | GATCGCCTGTGATTTGTTCC+AGG | + | chr1.1:73841194-73841213 | None:intergenic | 50.0% |
| !! | GCCTGTGATTTGTTCCAGGA+AGG | + | chr1.1:73841190-73841209 | None:intergenic | 50.0% |
| !! | GTTGGCATCATTGGTTTCCG+TGG | + | chr1.1:73841410-73841429 | None:intergenic | 50.0% |
| AAATGGAGAACAGACCCGGG+AGG | + | chr1.1:73841442-73841461 | None:intergenic | 55.0% | |
| AATGGAGAACAGACCCGGGA+GGG | + | chr1.1:73841441-73841460 | None:intergenic | 55.0% | |
| ACTAGAGGCAGTCTAGGCTG+TGG | + | chr1.1:73845474-73845493 | None:intergenic | 55.0% | |
| AGGCATGGAGCTTCACTGGA+AGG | + | chr1.1:73845413-73845432 | None:intergenic | 55.0% | |
| CAAATCACAGGCGATCCAGC+AGG | - | chr1.1:73841198-73841217 | MS.gene95812:intron | 55.0% | |
| CACAACACGGGTACGAGTAC+TGG | + | chr1.1:73844757-73844776 | None:intergenic | 55.0% | |
| CACAGCTCGTGATGCTGGTA+GGG | - | chr1.1:73844128-73844147 | MS.gene95812:intron | 55.0% | |
| CCAACGTTGTTAACCCTCCC+GGG | - | chr1.1:73841425-73841444 | MS.gene95812:intron | 55.0% | |
| CCGATTATCCCTTCGGTTCC+TGG | - | chr1.1:73843565-73843584 | MS.gene95812:CDS | 55.0% | |
| CCTTCGGTTCCTGGTTCAAC+CGG | - | chr1.1:73843574-73843593 | MS.gene95812:CDS | 55.0% | |
| CGAAACCCTAACTCCGACAC+CGG | - | chr1.1:73841558-73841577 | MS.gene95812:intron | 55.0% | |
| CGGAAACCATGGAGCATGAG+AGG | + | chr1.1:73840994-73841013 | None:intergenic | 55.0% | |
| CGGTTGAACCAGGAACCGAA+GGG | + | chr1.1:73843576-73843595 | None:intergenic | 55.0% | |
| GAGGTCTGTCGAGGATGGAT+CGG | + | chr1.1:73840806-73840825 | None:intergenic | 55.0% | |
| GCCAACGTTGTTAACCCTCC+CGG | - | chr1.1:73841424-73841443 | MS.gene95812:intron | 55.0% | |
| GCCGGTGTATCATCGTCAGT+AGG | + | chr1.1:73841250-73841269 | None:intergenic | 55.0% | |
| GCTGAGCCACTGGAAACTAG+AGG | + | chr1.1:73845489-73845508 | None:intergenic | 55.0% | |
| GGAGTTTCGCCGGATAAGGT+AGG | - | chr1.1:73842770-73842789 | MS.gene95812:intron | 55.0% | |
| TCTGTCGAGGATGGATCGGA+AGG | + | chr1.1:73840802-73840821 | None:intergenic | 55.0% | |
| TTCTCAGGAGCCGGAAACCA+TGG | + | chr1.1:73841005-73841024 | None:intergenic | 55.0% | |
| ! | ACAGAGGGTGCACACCTAGT+GGG | - | chr1.1:73842696-73842715 | MS.gene95812:intron | 55.0% |
| ! | GATGATACACCGGCTACCGT+CGG | - | chr1.1:73841256-73841275 | MS.gene95812:intron | 55.0% |
| !! | CTGGTTTTCAGCTGAGCCAC+TGG | + | chr1.1:73845499-73845518 | None:intergenic | 55.0% |
| AAAGCCTTCGGCGGAGGTTG+AGG | + | chr1.1:73841328-73841347 | None:intergenic | 60.0% | |
| AGAGGCAGTCTAGGCTGTGG+TGG | + | chr1.1:73845471-73845490 | None:intergenic | 60.0% | |
| ATGTCCGTCCTCCTTTCCCC+AGG | - | chr1.1:73842907-73842926 | MS.gene95812:intron | 60.0% | |
| CCCGGGAGGGTTAACAACGT+TGG | + | chr1.1:73841428-73841447 | None:intergenic | 60.0% | |
| CCGGTTGAACCAGGAACCGA+AGG | + | chr1.1:73843577-73843596 | None:intergenic | 60.0% | |
| GCACAGCTCGTGATGCTGGT+AGG | - | chr1.1:73844127-73844146 | MS.gene95812:intron | 60.0% | |
| GTGTTCGTACAGGGATGCGC+AGG | - | chr1.1:73841164-73841183 | MS.gene95812:intron | 60.0% | |
| TCAACCTCCGCCGAAGGCTT+TGG | - | chr1.1:73841327-73841346 | MS.gene95812:intron | 60.0% | |
| TCGGGATCCAAAGCCTTCGG+CGG | + | chr1.1:73841337-73841356 | None:intergenic | 60.0% | |
| ! | CACAGAGGGTGCACACCTAG+TGG | - | chr1.1:73842695-73842714 | MS.gene95812:intron | 60.0% |
| ! | GGAAGCACAGCTCGTGATGC+TGG | - | chr1.1:73844123-73844142 | MS.gene95812:intron | 60.0% |
| !! | GTGGTGATGGCGGTGAATGG+CGG | + | chr1.1:73841296-73841315 | None:intergenic | 60.0% |
| !! | GTGGTGGTGATGGCGGTGAA+TGG | + | chr1.1:73841299-73841318 | None:intergenic | 60.0% |
| AACTGGCGTGACCTCCCGTG+TGG | + | chr1.1:73843504-73843523 | None:intergenic | 65.0% | |
| ACACCAACGCCGACGGTAGC+CGG | + | chr1.1:73841268-73841287 | None:intergenic | 65.0% | |
| CCTTCGGCGGAGGTTGAGGA+GGG | + | chr1.1:73841324-73841343 | None:intergenic | 65.0% | |
| CTGGTTCAACCGGTCCGAGC+CGG | - | chr1.1:73843584-73843603 | MS.gene95812:CDS | 65.0% | |
| GGAGGAGACACCAACGCCGA+CGG | + | chr1.1:73841275-73841294 | None:intergenic | 65.0% | |
| GGATCCAAAGCCTTCGGCGG+AGG | + | chr1.1:73841334-73841353 | None:intergenic | 65.0% | |
| ! | GAGGTTGAGGAGGGTGGTGG+TGG | + | chr1.1:73841315-73841334 | None:intergenic | 65.0% |
| !! | GAGGAGGGTGGTGGTGGTGA+TGG | + | chr1.1:73841309-73841328 | None:intergenic | 65.0% |
| !! | GAGGGTGGTGGTGGTGATGG+CGG | + | chr1.1:73841306-73841325 | None:intergenic | 65.0% |
| !! | GTGATGGCGGTGAATGGCGG+AGG | + | chr1.1:73841293-73841312 | None:intergenic | 65.0% |
| CAGGGATGCGCAGGCCTTCC+TGG | - | chr1.1:73841173-73841192 | MS.gene95812:intron | 70.0% | |
| CCCTCCTCAACCTCCGCCGA+AGG | - | chr1.1:73841321-73841340 | MS.gene95812:intron | 70.0% | |
| GCCTTCGGCGGAGGTTGAGG+AGG | + | chr1.1:73841325-73841344 | None:intergenic | 70.0% | |
| GCGGAGGTTGAGGAGGGTGG+TGG | + | chr1.1:73841318-73841337 | None:intergenic | 70.0% | |
| TCGGCGGAGGTTGAGGAGGG+TGG | + | chr1.1:73841321-73841340 | None:intergenic | 70.0% | |
| ! | ACACCGGCTACCGTCGGCGT+TGG | - | chr1.1:73841262-73841281 | MS.gene95812:intron | 70.0% |
| ! | CGGCTCGGACCGGTTGAACC+AGG | + | chr1.1:73843586-73843605 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 73840777 | 73845559 | 73840777 | ID=MS.gene95812 |
| chr1.1 | mRNA | 73840777 | 73845559 | 73840777 | ID=MS.gene95812.t1;Parent=MS.gene95812 |
| chr1.1 | exon | 73845439 | 73845559 | 73845439 | ID=MS.gene95812.t1.exon1;Parent=MS.gene95812.t1 |
| chr1.1 | CDS | 73845439 | 73845559 | 73845439 | ID=cds.MS.gene95812.t1;Parent=MS.gene95812.t1 |
| chr1.1 | exon | 73844890 | 73845160 | 73844890 | ID=MS.gene95812.t1.exon2;Parent=MS.gene95812.t1 |
| chr1.1 | CDS | 73844890 | 73845160 | 73844890 | ID=cds.MS.gene95812.t1;Parent=MS.gene95812.t1 |
| chr1.1 | exon | 73843549 | 73843636 | 73843549 | ID=MS.gene95812.t1.exon3;Parent=MS.gene95812.t1 |
| chr1.1 | CDS | 73843549 | 73843636 | 73843549 | ID=cds.MS.gene95812.t1;Parent=MS.gene95812.t1 |
| chr1.1 | exon | 73843296 | 73843458 | 73843296 | ID=MS.gene95812.t1.exon4;Parent=MS.gene95812.t1 |
| chr1.1 | CDS | 73843296 | 73843458 | 73843296 | ID=cds.MS.gene95812.t1;Parent=MS.gene95812.t1 |
| chr1.1 | exon | 73842192 | 73842251 | 73842192 | ID=MS.gene95812.t1.exon5;Parent=MS.gene95812.t1 |
| chr1.1 | CDS | 73842192 | 73842251 | 73842192 | ID=cds.MS.gene95812.t1;Parent=MS.gene95812.t1 |
| chr1.1 | exon | 73841106 | 73841169 | 73841106 | ID=MS.gene95812.t1.exon6;Parent=MS.gene95812.t1 |
| chr1.1 | CDS | 73841106 | 73841169 | 73841106 | ID=cds.MS.gene95812.t1;Parent=MS.gene95812.t1 |
| chr1.1 | exon | 73840777 | 73840989 | 73840777 | ID=MS.gene95812.t1.exon7;Parent=MS.gene95812.t1 |
| chr1.1 | CDS | 73840777 | 73840989 | 73840777 | ID=cds.MS.gene95812.t1;Parent=MS.gene95812.t1 |
| Gene Sequence |
| Protein sequence |
