Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene96046.t1 | XP_024632961.1 | 84.5 | 793 | 95 | 4 | 1 | 765 | 1 | 793 | 0.00E+00 | 1333.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene96046.t1 | Q9SZL8 | 26.7 | 636 | 396 | 12 | 32 | 665 | 70 | 637 | 1.2e-61 | 239.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene96046.t1 | D3YBB9 | 76.7 | 774 | 160 | 4 | 1 | 764 | 49 | 812 | 0.0e+00 | 1195.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene96046.t1 | TF | FAR1 |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene96046.t1 | MTR_0558s0020 | 86.486 | 296 | 39 | 1 | 1 | 295 | 1 | 296 | 0.0 | 538 |
MS.gene96046.t1 | MTR_1g083640 | 82.042 | 284 | 35 | 1 | 1 | 268 | 1 | 284 | 3.37e-168 | 486 |
MS.gene96046.t1 | MTR_8g446020 | 73.220 | 295 | 40 | 1 | 1 | 295 | 1 | 256 | 1.36e-149 | 437 |
MS.gene96046.t1 | MTR_2g014100 | 81.224 | 245 | 37 | 1 | 1 | 236 | 1 | 245 | 3.08e-139 | 410 |
MS.gene96046.t1 | MTR_6g090505 | 82.278 | 237 | 42 | 0 | 65 | 301 | 1 | 237 | 8.46e-138 | 411 |
MS.gene96046.t1 | MTR_6g090505 | 67.647 | 102 | 6 | 2 | 396 | 495 | 230 | 306 | 6.69e-34 | 134 |
MS.gene96046.t1 | MTR_6g090505 | 77.551 | 49 | 11 | 0 | 567 | 615 | 314 | 362 | 2.24e-11 | 66.6 |
MS.gene96046.t1 | MTR_0337s0040 | 71.154 | 260 | 35 | 2 | 1 | 259 | 1 | 221 | 4.55e-120 | 360 |
MS.gene96046.t1 | MTR_3g008240 | 83.744 | 203 | 32 | 1 | 1 | 202 | 1 | 203 | 2.05e-116 | 350 |
MS.gene96046.t1 | MTR_4g040430 | 82.178 | 202 | 32 | 1 | 1 | 202 | 1 | 198 | 1.02e-113 | 342 |
MS.gene96046.t1 | MTR_0337s0060 | 58.861 | 316 | 30 | 4 | 447 | 759 | 21 | 239 | 2.30e-109 | 333 |
MS.gene96046.t1 | MTR_5g071590 | 72.778 | 180 | 36 | 2 | 1 | 167 | 1 | 180 | 7.69e-87 | 272 |
MS.gene96046.t1 | MTR_1g055240 | 86.620 | 142 | 19 | 0 | 91 | 232 | 3 | 144 | 6.54e-84 | 263 |
MS.gene96046.t1 | MTR_0019s0290 | 80.263 | 152 | 30 | 0 | 82 | 233 | 9 | 160 | 1.36e-81 | 257 |
MS.gene96046.t1 | MTR_3g028680 | 81.457 | 151 | 25 | 1 | 618 | 765 | 1 | 151 | 3.34e-81 | 258 |
MS.gene96046.t1 | MTR_2g067090 | 78.378 | 148 | 29 | 1 | 621 | 765 | 99 | 246 | 3.81e-72 | 237 |
MS.gene96046.t1 | MTR_4g133495 | 63.536 | 181 | 40 | 2 | 576 | 753 | 88 | 245 | 7.07e-68 | 225 |
MS.gene96046.t1 | MTR_4g133340 | 63.536 | 181 | 40 | 2 | 576 | 753 | 88 | 245 | 7.07e-68 | 225 |
MS.gene96046.t1 | MTR_1281s0010 | 79.817 | 109 | 22 | 0 | 19 | 127 | 1 | 109 | 6.07e-56 | 187 |
MS.gene96046.t1 | MTR_6g051425 | 31.761 | 318 | 186 | 6 | 40 | 341 | 22 | 324 | 2.29e-39 | 149 |
MS.gene96046.t1 | MTR_4g008820 | 83.750 | 80 | 12 | 1 | 1 | 79 | 125 | 204 | 6.63e-32 | 132 |
MS.gene96046.t1 | MTR_8g046060 | 77.273 | 88 | 11 | 2 | 1 | 79 | 91 | 178 | 1.58e-31 | 123 |
MS.gene96046.t1 | MTR_1g070355 | 26.543 | 324 | 217 | 6 | 41 | 362 | 80 | 384 | 9.39e-19 | 91.3 |
MS.gene96046.t1 | MTR_2g067130 | 62.162 | 74 | 22 | 2 | 695 | 765 | 46 | 116 | 1.88e-18 | 83.6 |
MS.gene96046.t1 | MTR_4g035820 | 23.103 | 290 | 190 | 7 | 17 | 299 | 61 | 324 | 7.84e-15 | 79.0 |
MS.gene96046.t1 | MTR_0402s0040 | 24.324 | 185 | 121 | 4 | 49 | 233 | 40 | 205 | 1.46e-13 | 74.3 |
MS.gene96046.t1 | MTR_0337s0050 | 75.000 | 36 | 9 | 0 | 259 | 294 | 14 | 49 | 1.60e-13 | 66.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene96046.t1 | AT4G38180 | 26.415 | 636 | 398 | 12 | 32 | 665 | 70 | 637 | 9.15e-68 | 239 |
MS.gene96046.t1 | AT4G15090 | 25.888 | 676 | 414 | 15 | 50 | 718 | 66 | 661 | 1.06e-60 | 220 |
MS.gene96046.t1 | AT4G15090 | 25.888 | 676 | 414 | 15 | 50 | 718 | 66 | 661 | 1.06e-60 | 220 |
MS.gene96046.t1 | AT4G15090 | 25.888 | 676 | 414 | 15 | 50 | 718 | 66 | 661 | 1.06e-60 | 220 |
MS.gene96046.t1 | AT4G15090 | 25.888 | 676 | 414 | 15 | 50 | 718 | 66 | 661 | 1.06e-60 | 220 |
MS.gene96046.t1 | AT4G15090 | 25.888 | 676 | 414 | 15 | 50 | 718 | 66 | 661 | 1.06e-60 | 220 |
MS.gene96046.t1 | AT2G27110 | 25.796 | 597 | 369 | 14 | 127 | 719 | 108 | 634 | 2.71e-53 | 199 |
MS.gene96046.t1 | AT2G27110 | 25.796 | 597 | 369 | 14 | 127 | 719 | 108 | 634 | 2.71e-53 | 199 |
MS.gene96046.t1 | AT3G06250 | 24.961 | 633 | 352 | 16 | 34 | 661 | 189 | 703 | 5.11e-52 | 194 |
MS.gene96046.t1 | AT3G06250 | 24.961 | 633 | 352 | 16 | 34 | 661 | 189 | 703 | 5.11e-52 | 194 |
MS.gene96046.t1 | AT3G06250 | 24.961 | 633 | 352 | 16 | 34 | 661 | 189 | 703 | 5.11e-52 | 194 |
MS.gene96046.t1 | AT2G27110 | 26.719 | 509 | 316 | 10 | 213 | 719 | 36 | 489 | 6.58e-52 | 193 |
MS.gene96046.t1 | AT1G76320 | 24.520 | 677 | 415 | 18 | 50 | 720 | 12 | 598 | 5.05e-50 | 187 |
MS.gene96046.t1 | AT1G76320 | 24.520 | 677 | 415 | 18 | 50 | 720 | 12 | 598 | 1.27e-49 | 187 |
MS.gene96046.t1 | AT1G76320 | 24.520 | 677 | 415 | 18 | 50 | 720 | 12 | 598 | 1.27e-49 | 187 |
MS.gene96046.t1 | AT1G76320 | 24.520 | 677 | 415 | 18 | 50 | 720 | 12 | 598 | 1.67e-49 | 186 |
MS.gene96046.t1 | AT3G22170 | 22.951 | 732 | 443 | 18 | 34 | 753 | 69 | 691 | 2.00e-48 | 184 |
MS.gene96046.t1 | AT3G22170 | 22.951 | 732 | 443 | 18 | 34 | 753 | 69 | 691 | 2.00e-48 | 184 |
MS.gene96046.t1 | AT5G18960 | 24.031 | 645 | 366 | 18 | 24 | 661 | 200 | 727 | 2.79e-46 | 177 |
MS.gene96046.t1 | AT5G18960 | 24.031 | 645 | 366 | 18 | 24 | 661 | 200 | 727 | 2.79e-46 | 177 |
MS.gene96046.t1 | AT4G38170 | 25.986 | 431 | 261 | 12 | 235 | 662 | 24 | 399 | 5.07e-44 | 167 |
MS.gene96046.t1 | AT2G32250 | 23.600 | 750 | 431 | 22 | 1 | 743 | 8 | 622 | 3.84e-42 | 165 |
MS.gene96046.t1 | AT2G32250 | 23.600 | 750 | 431 | 22 | 1 | 743 | 8 | 622 | 5.82e-42 | 164 |
MS.gene96046.t1 | AT2G32250 | 23.600 | 750 | 431 | 22 | 1 | 743 | 8 | 622 | 5.82e-42 | 164 |
MS.gene96046.t1 | AT2G32250 | 23.600 | 750 | 431 | 22 | 1 | 743 | 8 | 622 | 5.82e-42 | 164 |
MS.gene96046.t1 | AT1G10240 | 25.481 | 624 | 371 | 21 | 49 | 659 | 62 | 604 | 7.08e-42 | 163 |
MS.gene96046.t1 | AT1G10240 | 25.481 | 624 | 371 | 21 | 49 | 659 | 62 | 604 | 7.08e-42 | 163 |
MS.gene96046.t1 | AT2G32250 | 23.600 | 750 | 431 | 22 | 1 | 743 | 8 | 622 | 7.10e-42 | 164 |
MS.gene96046.t1 | AT2G32250 | 23.600 | 750 | 431 | 22 | 1 | 743 | 8 | 622 | 7.10e-42 | 164 |
MS.gene96046.t1 | AT5G28530 | 24.455 | 642 | 382 | 19 | 40 | 660 | 60 | 619 | 8.51e-42 | 163 |
MS.gene96046.t1 | AT2G32250 | 23.803 | 710 | 403 | 20 | 41 | 743 | 3 | 581 | 1.66e-41 | 163 |
MS.gene96046.t1 | AT2G32250 | 23.803 | 710 | 403 | 20 | 41 | 743 | 3 | 581 | 2.00e-41 | 162 |
MS.gene96046.t1 | AT5G28530 | 24.299 | 642 | 379 | 20 | 40 | 660 | 60 | 615 | 4.22e-41 | 160 |
MS.gene96046.t1 | AT5G28530 | 24.299 | 642 | 379 | 20 | 40 | 660 | 60 | 615 | 4.22e-41 | 160 |
MS.gene96046.t1 | AT1G80010 | 23.944 | 639 | 391 | 22 | 41 | 662 | 101 | 661 | 1.09e-36 | 148 |
MS.gene96046.t1 | AT1G52520 | 23.370 | 629 | 394 | 20 | 41 | 662 | 91 | 638 | 7.36e-34 | 139 |
MS.gene96046.t1 | AT4G19990 | 24.283 | 453 | 280 | 11 | 41 | 483 | 27 | 426 | 8.98e-29 | 123 |
MS.gene96046.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 591 | 721 | 495 | 615 | 2.04e-12 | 71.2 |
MS.gene96046.t1 | AT4G19990 | 24.283 | 453 | 280 | 11 | 41 | 483 | 41 | 440 | 1.04e-28 | 123 |
MS.gene96046.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 591 | 721 | 509 | 629 | 2.29e-12 | 71.2 |
MS.gene96046.t1 | AT4G19990 | 24.283 | 453 | 280 | 11 | 41 | 483 | 27 | 426 | 1.05e-28 | 123 |
MS.gene96046.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 591 | 721 | 495 | 615 | 2.04e-12 | 71.2 |
MS.gene96046.t1 | AT4G19990 | 24.283 | 453 | 280 | 11 | 41 | 483 | 27 | 426 | 1.05e-28 | 123 |
MS.gene96046.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 591 | 721 | 495 | 615 | 2.04e-12 | 71.2 |
MS.gene96046.t1 | AT4G19990 | 24.283 | 453 | 280 | 11 | 41 | 483 | 27 | 426 | 1.48e-28 | 122 |
MS.gene96046.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 591 | 721 | 495 | 615 | 2.06e-12 | 71.2 |
MS.gene96046.t1 | AT4G19990 | 24.283 | 453 | 280 | 11 | 41 | 483 | 27 | 426 | 1.48e-28 | 122 |
MS.gene96046.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 591 | 721 | 495 | 615 | 2.06e-12 | 71.2 |
MS.gene96046.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 219 | 483 | 106 | 369 | 2.01e-27 | 119 |
MS.gene96046.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 591 | 721 | 438 | 558 | 1.87e-12 | 71.2 |
MS.gene96046.t1 | AT5G28530 | 21.622 | 629 | 353 | 20 | 40 | 660 | 60 | 556 | 8.02e-23 | 104 |
MS.gene96046.t1 | AT5G28530 | 21.463 | 629 | 350 | 21 | 40 | 660 | 60 | 552 | 3.91e-22 | 102 |
Find 115 sgRNAs with CRISPR-Local
Find 184 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTCGATGAGTTAACTAATT+TGG | 0.156761 | 7.4:+29625361 | MS.gene96046:CDS |
AGTCGCTTCTTTGACCTAAT+TGG | 0.186128 | 7.4:-29626496 | None:intergenic |
CTTTAGTCATTTCAACATTA+TGG | 0.194287 | 7.4:+29625628 | MS.gene96046:CDS |
TACATTTCAGCTGCCTTTCT+TGG | 0.197151 | 7.4:+29625080 | MS.gene96046:intron |
CAACAAGATTATGCTCTATT+TGG | 0.198611 | 7.4:+29624557 | MS.gene96046:CDS |
CATCGTAAGAGTGTGTTATT+TGG | 0.276792 | 7.4:+29625113 | MS.gene96046:CDS |
TATGGTTTGAGGTTTCTTAT+TGG | 0.280533 | 7.4:-29625207 | None:intergenic |
TTCTTTGACCTAATTGGATT+TGG | 0.299426 | 7.4:-29626490 | None:intergenic |
ACCGGCCTGGTCTGTGTATA+TGG | 0.301450 | 7.4:-29625225 | None:intergenic |
GGTTTCAAATGTTGATGTTT+TGG | 0.317051 | 7.4:+29625925 | MS.gene96046:CDS |
AATCAGATTTCGACTACAAT+TGG | 0.318540 | 7.4:+29625402 | MS.gene96046:CDS |
TGTTCTTGAGGCAGGGAAAA+AGG | 0.322946 | 7.4:+29626342 | MS.gene96046:CDS |
GTCTTTAGTGCCAACATTCA+TGG | 0.339668 | 7.4:-29626218 | None:intergenic |
GCCGATATTTATTGTTTGTT+CGG | 0.341758 | 7.4:-29624607 | None:intergenic |
GAGGGATAATCATGCTGATT+TGG | 0.346844 | 7.4:+29625661 | MS.gene96046:CDS |
TATGCATTGGTCTTCAGTTT+GGG | 0.370760 | 7.4:+29625502 | MS.gene96046:CDS |
TTTGGTCTTTCCTTGAACTT+TGG | 0.372516 | 7.4:-29626472 | None:intergenic |
CTCAACGGTGTTCTTGAGGC+AGG | 0.386173 | 7.4:+29626334 | MS.gene96046:CDS |
AACAATAAATATCGGCCATT+AGG | 0.388497 | 7.4:+29624614 | MS.gene96046:CDS |
TCATGCTGATTTGGACTTCA+AGG | 0.389304 | 7.4:+29625670 | MS.gene96046:CDS |
ACCGAACAAACAATAAATAT+CGG | 0.389395 | 7.4:+29624606 | MS.gene96046:CDS |
GTATGCATTGGTCTTCAGTT+TGG | 0.392120 | 7.4:+29625501 | MS.gene96046:CDS |
TTCTCATACTCAACAAGAAC+TGG | 0.395633 | 7.4:-29624077 | None:intergenic |
GAGGAGTTTCTTATTTCTAA+AGG | 0.403538 | 7.4:+29626367 | MS.gene96046:CDS |
TAAAGAATCATGGCAGTCTT+TGG | 0.406614 | 7.4:+29623848 | MS.gene96046:CDS |
CATGTCGTATGTTTGAGAAC+CGG | 0.411671 | 7.4:+29626050 | MS.gene96046:CDS |
AGGAAAGACCAAATCCAATT+AGG | 0.411999 | 7.4:+29626482 | MS.gene96046:CDS |
GATTATGATCTTCAAACCTT+GGG | 0.413114 | 7.4:-29625973 | None:intergenic |
ATAACACTGGATTCTCTGTT+AGG | 0.417808 | 7.4:+29623919 | MS.gene96046:CDS |
GGGTTGTCACAGTCGACATT+AGG | 0.419786 | 7.4:+29626008 | MS.gene96046:CDS |
CGATTATGATCTTCAAACCT+TGG | 0.425681 | 7.4:-29625974 | None:intergenic |
ATCTGAAAGTGGACAATTGA+CGG | 0.429148 | 7.4:+29623773 | MS.gene96046:CDS |
CGAGAAGTAAATGAAGTTCA+AGG | 0.430014 | 7.4:+29624254 | MS.gene96046:CDS |
TGGTCTGTGTATATGGTTTG+AGG | 0.430860 | 7.4:-29625218 | None:intergenic |
AGCTGGAATATATTTGAAGT+TGG | 0.433136 | 7.4:+29624136 | MS.gene96046:CDS |
CCATGATTCTTTATCACTAA+AGG | 0.442634 | 7.4:-29623838 | None:intergenic |
TGAATGTCTATAAGATATAT+AGG | 0.445219 | 7.4:+29624168 | MS.gene96046:CDS |
GAAAGGGTTGGTTGTAAAGC+TGG | 0.447509 | 7.4:+29624119 | MS.gene96046:CDS |
CGCTTTAAAACATATTGTGC+AGG | 0.447633 | 7.4:-29626151 | None:intergenic |
CGTTATGCTTGTAACAAAGA+AGG | 0.449439 | 7.4:+29624002 | MS.gene96046:CDS |
GCTTTAATAAATTCTAAAGC+TGG | 0.450264 | 7.4:+29624284 | MS.gene96046:CDS |
TGGTCTTTGCTCATGGCACA+TGG | 0.452802 | 7.4:+29625292 | MS.gene96046:CDS |
CTCCTCAAAATAGTATTTGA+AGG | 0.453936 | 7.4:-29625804 | None:intergenic |
TGGGACTGCACCAAAGTTCA+AGG | 0.458832 | 7.4:+29626462 | MS.gene96046:CDS |
ATGTCGTATGTTTGAGAACC+GGG | 0.461344 | 7.4:+29626051 | MS.gene96046:CDS |
GGCCTACTTCAGACTTTAAG+TGG | 0.462107 | 7.4:+29625456 | MS.gene96046:CDS |
CGCAAACACGTGTAGAAAGC+TGG | 0.465682 | 7.4:-29626285 | None:intergenic |
ACAAAATAAGAAATCGGATA+AGG | 0.469178 | 7.4:+29623968 | MS.gene96046:CDS |
TTTGAGGAGGACACAACAAA+AGG | 0.469432 | 7.4:+29625818 | MS.gene96046:CDS |
GCTGTCTGTGAGCCATCTGT+TGG | 0.470881 | 7.4:+29626442 | MS.gene96046:CDS |
CTGTCTGTGAGCCATCTGTT+GGG | 0.478819 | 7.4:+29626443 | MS.gene96046:CDS |
TTACAACCAACCCTTTCCTC+TGG | 0.485330 | 7.4:-29624113 | None:intergenic |
TTTAATTATGCATATAACAC+TGG | 0.485542 | 7.4:+29623906 | MS.gene96046:CDS |
CAATTCACAAAATAAGAAAT+CGG | 0.490263 | 7.4:+29623962 | MS.gene96046:CDS |
ATGATTGTCAAAACCAAGAA+AGG | 0.491378 | 7.4:-29625093 | None:intergenic |
ATCAGATTTCGACTACAATT+GGG | 0.491708 | 7.4:+29625403 | MS.gene96046:CDS |
CGTCAAAAGGAGATGGTGGC+TGG | 0.492100 | 7.4:+29624410 | MS.gene96046:CDS |
ACATTATGGTTCAGAGAATG+AGG | 0.494022 | 7.4:+29625642 | MS.gene96046:CDS |
GACCGCATAAGCTGACTGTT+GGG | 0.496307 | 7.4:-29625722 | None:intergenic |
ATATCAACTTCATCTGAAAG+TGG | 0.498032 | 7.4:+29623762 | MS.gene96046:CDS |
TGTCTTCTGCAGCATCAACT+TGG | 0.502977 | 7.4:-29624502 | None:intergenic |
CTCATTCAAATCGTATGCAT+TGG | 0.507227 | 7.4:+29625489 | MS.gene96046:CDS |
ATCATAATCGACTTGATGAA+AGG | 0.507955 | 7.4:+29625987 | MS.gene96046:CDS |
TTTAAGTCCGAAAATCGAAA+AGG | 0.508080 | 7.4:-29624368 | None:intergenic |
ATTGGTCTTCAGTTTGGGTG+AGG | 0.509410 | 7.4:+29625507 | MS.gene96046:CDS |
ACTTCAACAACGCACCGGCC+TGG | 0.511120 | 7.4:-29625238 | None:intergenic |
GATCTTCAAACCTTGGGGAA+AGG | 0.519004 | 7.4:-29625967 | None:intergenic |
CAAAATAGTATTTGAAGGAA+AGG | 0.519540 | 7.4:-29625799 | None:intergenic |
TAAAGAATCGAACAAGTGAA+TGG | 0.519618 | 7.4:-29625610 | None:intergenic |
AAATGCTCTGCTTTATGTAA+TGG | 0.525118 | 7.4:-29624212 | None:intergenic |
TCTAATGATGACTCGTCAAA+AGG | 0.525867 | 7.4:+29624397 | MS.gene96046:CDS |
TCATAATCGACTTGATGAAA+GGG | 0.526860 | 7.4:+29625988 | MS.gene96046:CDS |
TTGAGGAGGACACAACAAAA+GGG | 0.529908 | 7.4:+29625819 | MS.gene96046:CDS |
TGTCTATAAGATATATAGGT+GGG | 0.532209 | 7.4:+29624172 | MS.gene96046:CDS |
CTGAAATCTACCATGAATGT+TGG | 0.534154 | 7.4:+29626208 | MS.gene96046:CDS |
TAACAAAGAAGGTTTCAAGA+AGG | 0.538422 | 7.4:+29624013 | MS.gene96046:CDS |
AATCGAACAAGTGAATGGTC+TGG | 0.540971 | 7.4:-29625605 | None:intergenic |
AACAAAGAAGGTTTCAAGAA+GGG | 0.545537 | 7.4:+29624014 | MS.gene96046:CDS |
GAGAACATCTTATGAAGTGA+TGG | 0.551307 | 7.4:+29624316 | MS.gene96046:CDS |
AATGAAGCTCTCTCGAAACC+AGG | 0.565261 | 7.4:+29624464 | MS.gene96046:CDS |
TGAAAATTCAGTTATTGATG+CGG | 0.565546 | 7.4:+29623797 | MS.gene96046:CDS |
GGGTGAAGGTGTTGGAGGCA+CGG | 0.565649 | 7.4:+29624337 | MS.gene96046:CDS |
CCTTTAGTGATAAAGAATCA+TGG | 0.567628 | 7.4:+29623838 | MS.gene96046:CDS |
TACACGTGTTTGCGCAGATG+CGG | 0.571672 | 7.4:+29626294 | MS.gene96046:CDS |
GGACCGCATAAGCTGACTGT+TGG | 0.579264 | 7.4:-29625723 | None:intergenic |
TGGTGTATACTTGTTTACTA+CGG | 0.585960 | 7.4:-29625744 | None:intergenic |
GATGACTCGTCAAAAGGAGA+TGG | 0.589164 | 7.4:+29624403 | MS.gene96046:CDS |
TCAACGGTGTTCTTGAGGCA+GGG | 0.590097 | 7.4:+29626335 | MS.gene96046:CDS |
ATTTCTCAACGGTGTTCTTG+AGG | 0.591378 | 7.4:+29626330 | MS.gene96046:CDS |
TTTGGTGCAGTCCCAACAGA+TGG | 0.595102 | 7.4:-29626454 | None:intergenic |
TGAAGACTTAGAAGGCGTAA+CGG | 0.598405 | 7.4:-29626410 | None:intergenic |
TTGAAGGAAACCTTTCCCCA+AGG | 0.600566 | 7.4:+29625957 | MS.gene96046:CDS |
GAAGTGATGGGTGAAGGTGT+TGG | 0.603704 | 7.4:+29624329 | MS.gene96046:CDS |
ACGTGTTTGCGCAGATGCGG+AGG | 0.605934 | 7.4:+29626297 | MS.gene96046:CDS |
ATCCCAACAGTCAGCTTATG+CGG | 0.606153 | 7.4:+29625720 | MS.gene96046:CDS |
ATGTTGATAATGATAATGAG+AGG | 0.609132 | 7.4:+29625903 | MS.gene96046:CDS |
ACCATATACACAGACCAGGC+CGG | 0.609245 | 7.4:+29625224 | MS.gene96046:CDS |
AGCCACTTAAAGTCTGAAGT+AGG | 0.617789 | 7.4:-29625458 | None:intergenic |
TGTTGATAATGATAATGAGA+GGG | 0.618346 | 7.4:+29625904 | MS.gene96046:CDS |
AGAACTGGACTGTCACATGT+TGG | 0.620791 | 7.4:-29624062 | None:intergenic |
GTGATGGGTGAAGGTGTTGG+AGG | 0.621481 | 7.4:+29624332 | MS.gene96046:CDS |
ATTATGATCTTCAAACCTTG+GGG | 0.630358 | 7.4:-29625972 | None:intergenic |
GGTCTTTGCTCATGGCACAT+GGG | 0.639768 | 7.4:+29625293 | MS.gene96046:CDS |
AGAACATCTTATGAAGTGAT+GGG | 0.643044 | 7.4:+29624317 | MS.gene96046:CDS |
CATTATGGTTCAGAGAATGA+GGG | 0.643278 | 7.4:+29625643 | MS.gene96046:CDS |
ATGTCTATAAGATATATAGG+TGG | 0.643489 | 7.4:+29624171 | MS.gene96046:CDS |
GATTTCAGCTTATCGACAGA+CGG | 0.644926 | 7.4:-29626193 | None:intergenic |
GACTCGTCAAAAGGAGATGG+TGG | 0.647756 | 7.4:+29624406 | MS.gene96046:CDS |
TGAATAAATGAAAAGCAAGA+TGG | 0.655697 | 7.4:-29625764 | None:intergenic |
TCTTATGAAGTGATGGGTGA+AGG | 0.656961 | 7.4:+29624323 | MS.gene96046:CDS |
AATTGACTTCAACAACGCAC+CGG | 0.659777 | 7.4:-29625243 | None:intergenic |
GCATCTGAAATATTTCTCAA+CGG | 0.661104 | 7.4:+29626319 | MS.gene96046:CDS |
CATGTCGACATAAGAAACCC+CGG | 0.663279 | 7.4:-29626069 | None:intergenic |
TCAAACCATATACACAGACC+AGG | 0.669804 | 7.4:+29625220 | MS.gene96046:CDS |
TGTCGTATGTTTGAGAACCG+GGG | 0.673760 | 7.4:+29626052 | MS.gene96046:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ACGTATTTATTATTATATCT+TGG | + | chr7.4:29626798-29626817 | MS.gene96046:intron | 15.0% |
!! | TTGAATATTATATTATCTTC+TGG | + | chr7.4:29626744-29626763 | MS.gene96046:intron | 15.0% |
!!! | TGTTTTTTTTGTTATAAGTT+AGG | + | chr7.4:29626622-29626641 | MS.gene96046:intron | 15.0% |
!! | AAACCAAATTAACAATCTAA+TGG | - | chr7.4:29626831-29626850 | None:intergenic | 20.0% |
!! | AAACCATAATTATGGTTTAA+TGG | - | chr7.4:29626874-29626893 | None:intergenic | 20.0% |
!! | AAACCATTAAACCATAATTA+TGG | + | chr7.4:29626868-29626887 | MS.gene96046:intron | 20.0% |
!! | AAACCATTAGATTGTTAATT+TGG | + | chr7.4:29626825-29626844 | MS.gene96046:intron | 20.0% |
!! | AATTCTTGATTGTTATGTAT+TGG | + | chr7.4:29626720-29626739 | MS.gene96046:intron | 20.0% |
!! | CAATTCACAAAATAAGAAAT+CGG | + | chr7.4:29623962-29623981 | MS.gene96046:CDS | 20.0% |
!! | TCTTAACTAAACCATAATTA+TGG | - | chr7.4:29626882-29626901 | None:intergenic | 20.0% |
!! | TGAATGTCTATAAGATATAT+AGG | + | chr7.4:29624168-29624187 | MS.gene96046:CDS | 20.0% |
!! | TTTAATTATGCATATAACAC+TGG | + | chr7.4:29623906-29623925 | MS.gene96046:CDS | 20.0% |
!!! | AATTTAATGTTCTGGTTTAT+TGG | + | chr7.4:29624789-29624808 | MS.gene96046:intron | 20.0% |
!!! | ATGATGAAAAACTGTTTTAA+TGG | + | chr7.4:29625431-29625450 | MS.gene96046:CDS | 20.0% |
!!! | TGAATGTTTATATTGATTGA+AGG | + | chr7.4:29624761-29624780 | MS.gene96046:intron | 20.0% |
! | AAAACACCTTGAAAAACATT+CGG | - | chr7.4:29625269-29625288 | None:intergenic | 25.0% |
! | AAAGTGATTATGAAAAAGCT+AGG | + | chr7.4:29626521-29626540 | MS.gene96046:intron | 25.0% |
! | AAGTGATTATGAAAAAGCTA+GGG | + | chr7.4:29626522-29626541 | MS.gene96046:intron | 25.0% |
! | ACAAAATAAGAAATCGGATA+AGG | + | chr7.4:29623968-29623987 | MS.gene96046:CDS | 25.0% |
! | ACCGAACAAACAATAAATAT+CGG | + | chr7.4:29624606-29624625 | MS.gene96046:CDS | 25.0% |
! | AGTACAAAATACTAACCTAA+TGG | - | chr7.4:29624632-29624651 | None:intergenic | 25.0% |
! | ATGTCTATAAGATATATAGG+TGG | + | chr7.4:29624171-29624190 | MS.gene96046:CDS | 25.0% |
! | CAAAATAGTATTTGAAGGAA+AGG | - | chr7.4:29625802-29625821 | None:intergenic | 25.0% |
! | CTTTAGTCATTTCAACATTA+TGG | + | chr7.4:29625628-29625647 | MS.gene96046:CDS | 25.0% |
! | TGAAAATTCAGTTATTGATG+CGG | + | chr7.4:29623797-29623816 | MS.gene96046:CDS | 25.0% |
! | TGAAATTTGAATGAATGTTC+TGG | + | chr7.4:29624679-29624698 | MS.gene96046:intron | 25.0% |
! | TGAATAAATGAAAAGCAAGA+TGG | - | chr7.4:29625767-29625786 | None:intergenic | 25.0% |
! | TGTCTATAAGATATATAGGT+GGG | + | chr7.4:29624172-29624191 | MS.gene96046:CDS | 25.0% |
! | TTTCGATGAGTTAACTAATT+TGG | + | chr7.4:29625361-29625380 | MS.gene96046:CDS | 25.0% |
!! | AGGTTTAGAATTTAATGTTC+TGG | + | chr7.4:29624781-29624800 | MS.gene96046:intron | 25.0% |
!! | ATTTTCAATTCTGAGTTAAG+TGG | + | chr7.4:29626901-29626920 | MS.gene96046:intron | 25.0% |
!! | CAAAGTTTTTACAATTGAGA+AGG | + | chr7.4:29625862-29625881 | MS.gene96046:CDS | 25.0% |
!! | TGTTGTATTTTGTTCTGATT+TGG | + | chr7.4:29625051-29625070 | MS.gene96046:intron | 25.0% |
!! | TTCCTTCAAATACTATTTTG+AGG | + | chr7.4:29625802-29625821 | MS.gene96046:CDS | 25.0% |
!!! | AAGACATAGCTAGTATTTTT+TGG | + | chr7.4:29624519-29624538 | MS.gene96046:CDS | 25.0% |
!!! | AGACATAGCTAGTATTTTTT+GGG | + | chr7.4:29624520-29624539 | MS.gene96046:CDS | 25.0% |
!!! | ATGTTGATAATGATAATGAG+AGG | + | chr7.4:29625903-29625922 | MS.gene96046:CDS | 25.0% |
!!! | CTTATTTTGTGAATTGTTCT+TGG | - | chr7.4:29623958-29623977 | None:intergenic | 25.0% |
!!! | GCTTTAATAAATTCTAAAGC+TGG | + | chr7.4:29624284-29624303 | MS.gene96046:CDS | 25.0% |
!!! | TGAAAAACTGTTTTAATGGA+AGG | + | chr7.4:29625435-29625454 | MS.gene96046:CDS | 25.0% |
!!! | TGTTGATAATGATAATGAGA+GGG | + | chr7.4:29625904-29625923 | MS.gene96046:CDS | 25.0% |
AAACACATATGATCTTTCCA+TGG | - | chr7.4:29624852-29624871 | None:intergenic | 30.0% | |
AAATGCTCTGCTTTATGTAA+TGG | - | chr7.4:29624215-29624234 | None:intergenic | 30.0% | |
AACAAAGAAGGTTTCAAGAA+GGG | + | chr7.4:29624014-29624033 | MS.gene96046:CDS | 30.0% | |
AACAATAAATATCGGCCATT+AGG | + | chr7.4:29624614-29624633 | MS.gene96046:CDS | 30.0% | |
AATCAGATTTCGACTACAAT+TGG | + | chr7.4:29625402-29625421 | MS.gene96046:CDS | 30.0% | |
AGAACATCTTATGAAGTGAT+GGG | + | chr7.4:29624317-29624336 | MS.gene96046:CDS | 30.0% | |
ATAAGTTAGGAAAGATGATG+AGG | + | chr7.4:29626635-29626654 | MS.gene96046:intron | 30.0% | |
ATATCAACTTCATCTGAAAG+TGG | + | chr7.4:29623762-29623781 | MS.gene96046:CDS | 30.0% | |
ATCAGATTTCGACTACAATT+GGG | + | chr7.4:29625403-29625422 | MS.gene96046:CDS | 30.0% | |
ATGATTGTCAAAACCAAGAA+AGG | - | chr7.4:29625096-29625115 | None:intergenic | 30.0% | |
ATTATGATCTTCAAACCTTG+GGG | - | chr7.4:29625975-29625994 | None:intergenic | 30.0% | |
CAACAAGATTATGCTCTATT+TGG | + | chr7.4:29624557-29624576 | MS.gene96046:CDS | 30.0% | |
CACAAATTCTAAGTCAAGAT+AGG | - | chr7.4:29624819-29624838 | None:intergenic | 30.0% | |
CCATGATTCTTTATCACTAA+AGG | - | chr7.4:29623841-29623860 | None:intergenic | 30.0% | |
CCTTTAGTGATAAAGAATCA+TGG | + | chr7.4:29623838-29623857 | MS.gene96046:CDS | 30.0% | |
CTCCTCAAAATAGTATTTGA+AGG | - | chr7.4:29625807-29625826 | None:intergenic | 30.0% | |
CTGGTATATGTGTGTTAATT+TGG | + | chr7.4:29624718-29624737 | MS.gene96046:intron | 30.0% | |
GAATCAAAAGAAAGATGATG+AGG | + | chr7.4:29626573-29626592 | MS.gene96046:intron | 30.0% | |
GAGAATGCAAAGAAAAATCT+CGG | + | chr7.4:29625317-29625336 | MS.gene96046:CDS | 30.0% | |
GATTATGATCTTCAAACCTT+GGG | - | chr7.4:29625976-29625995 | None:intergenic | 30.0% | |
GCCGATATTTATTGTTTGTT+CGG | - | chr7.4:29624610-29624629 | None:intergenic | 30.0% | |
TAAAGAAAAACCAGAGGAAA+GGG | + | chr7.4:29624103-29624122 | MS.gene96046:CDS | 30.0% | |
TAAAGAATCGAACAAGTGAA+TGG | - | chr7.4:29625613-29625632 | None:intergenic | 30.0% | |
TAACAAAGAAGGTTTCAAGA+AGG | + | chr7.4:29624013-29624032 | MS.gene96046:CDS | 30.0% | |
TGGATATCATAGTAAAAACC+TGG | - | chr7.4:29624485-29624504 | None:intergenic | 30.0% | |
TGGTGTATACTTGTTTACTA+CGG | - | chr7.4:29625747-29625766 | None:intergenic | 30.0% | |
TTCTTTGACCTAATTGGATT+TGG | - | chr7.4:29626493-29626512 | None:intergenic | 30.0% | |
TTTAAGTCCGAAAATCGAAA+AGG | - | chr7.4:29624371-29624390 | None:intergenic | 30.0% | |
TTTCTATTTACACAGCTCAA+TGG | + | chr7.4:29625010-29625029 | MS.gene96046:intron | 30.0% | |
! | AGCTGGAATATATTTGAAGT+TGG | + | chr7.4:29624136-29624155 | MS.gene96046:CDS | 30.0% |
! | CTATACATTTTCACGTTTGT+TGG | + | chr7.4:29626770-29626789 | MS.gene96046:intron | 30.0% |
! | GAATCTTCCTTTTCGATTTT+CGG | + | chr7.4:29624361-29624380 | MS.gene96046:CDS | 30.0% |
! | GCATCTGAAATATTTCTCAA+CGG | + | chr7.4:29626319-29626338 | MS.gene96046:CDS | 30.0% |
! | GGTTTCAAATGTTGATGTTT+TGG | + | chr7.4:29625925-29625944 | MS.gene96046:CDS | 30.0% |
! | TATGGTTTGAGGTTTCTTAT+TGG | - | chr7.4:29625210-29625229 | None:intergenic | 30.0% |
! | TCAATTCCGAATGTTTTTCA+AGG | + | chr7.4:29625260-29625279 | MS.gene96046:CDS | 30.0% |
! | TGAGGCTTTAACAATTTAAG+CGG | + | chr7.4:29626591-29626610 | MS.gene96046:intron | 30.0% |
! | TGAGGCTTTAACTAAAAAAG+CGG | + | chr7.4:29626653-29626672 | MS.gene96046:intron | 30.0% |
!! | ATCATAATCGACTTGATGAA+AGG | + | chr7.4:29625987-29626006 | MS.gene96046:CDS | 30.0% |
!! | ATGTTCTGGTTTAGAATTGA+AGG | + | chr7.4:29624693-29624712 | MS.gene96046:intron | 30.0% |
!! | CTTCAAATACTATTTTGAGG+AGG | + | chr7.4:29625805-29625824 | MS.gene96046:CDS | 30.0% |
!! | GAGGAGTTTCTTATTTCTAA+AGG | + | chr7.4:29626367-29626386 | MS.gene96046:CDS | 30.0% |
!! | TCATAATCGACTTGATGAAA+GGG | + | chr7.4:29625988-29626007 | MS.gene96046:CDS | 30.0% |
!! | TCGACATGTTTTCAAGATTT+TGG | + | chr7.4:29626084-29626103 | MS.gene96046:CDS | 30.0% |
!!! | CTGCACAATATGTTTTAAAG+CGG | + | chr7.4:29626152-29626171 | MS.gene96046:CDS | 30.0% |
!!! | GTTTTTCAAGGTGTTTTTCA+TGG | + | chr7.4:29625272-29625291 | MS.gene96046:CDS | 30.0% |
!!! | TTCAAGATTTTGGAGTTCTT+AGG | + | chr7.4:29626094-29626113 | MS.gene96046:CDS | 30.0% |
ACATTATGGTTCAGAGAATG+AGG | + | chr7.4:29625642-29625661 | MS.gene96046:CDS | 35.0% | |
AGGAAAGACCAAATCCAATT+AGG | + | chr7.4:29626482-29626501 | MS.gene96046:CDS | 35.0% | |
ATAACACTGGATTCTCTGTT+AGG | + | chr7.4:29623919-29623938 | MS.gene96046:CDS | 35.0% | |
ATCTGAAAGTGGACAATTGA+CGG | + | chr7.4:29623773-29623792 | MS.gene96046:CDS | 35.0% | |
CATTATGGTTCAGAGAATGA+GGG | + | chr7.4:29625643-29625662 | MS.gene96046:CDS | 35.0% | |
CGAGAAGTAAATGAAGTTCA+AGG | + | chr7.4:29624254-29624273 | MS.gene96046:CDS | 35.0% | |
CGATTATGATCTTCAAACCT+TGG | - | chr7.4:29625977-29625996 | None:intergenic | 35.0% | |
CGTTATGCTTGTAACAAAGA+AGG | + | chr7.4:29624002-29624021 | MS.gene96046:CDS | 35.0% | |
CTAAAGAAAAACCAGAGGAA+AGG | + | chr7.4:29624102-29624121 | MS.gene96046:CDS | 35.0% | |
CTCATTCAAATCGTATGCAT+TGG | + | chr7.4:29625489-29625508 | MS.gene96046:CDS | 35.0% | |
CTGAAATCTACCATGAATGT+TGG | + | chr7.4:29626208-29626227 | MS.gene96046:CDS | 35.0% | |
GAAAGCTAAAGAAAAACCAG+AGG | + | chr7.4:29624097-29624116 | MS.gene96046:CDS | 35.0% | |
GACAGAAATTCCTTATAGCT+CGG | + | chr7.4:29626548-29626567 | MS.gene96046:intron | 35.0% | |
GAGAACATCTTATGAAGTGA+TGG | + | chr7.4:29624316-29624335 | MS.gene96046:CDS | 35.0% | |
GTCTGCTTAATCCTAAAAAC+AGG | + | chr7.4:29624039-29624058 | MS.gene96046:CDS | 35.0% | |
TAAAGAATCATGGCAGTCTT+TGG | + | chr7.4:29623848-29623867 | MS.gene96046:CDS | 35.0% | |
TCTAATGATGACTCGTCAAA+AGG | + | chr7.4:29624397-29624416 | MS.gene96046:CDS | 35.0% | |
TTCTCATACTCAACAAGAAC+TGG | - | chr7.4:29624080-29624099 | None:intergenic | 35.0% | |
TTTGATTCTTCCGAGCTATA+AGG | - | chr7.4:29626561-29626580 | None:intergenic | 35.0% | |
! | CATCGTAAGAGTGTGTTATT+TGG | + | chr7.4:29625113-29625132 | MS.gene96046:CDS | 35.0% |
! | GAGGCTTTAACAATTTAAGC+GGG | + | chr7.4:29626592-29626611 | MS.gene96046:intron | 35.0% |
! | TCTTTCAATGCTTTTCTTCG+TGG | + | chr7.4:29625572-29625591 | MS.gene96046:CDS | 35.0% |
! | TTTGGTCTTTCCTTGAACTT+TGG | - | chr7.4:29626475-29626494 | None:intergenic | 35.0% |
! | TTTTTCATGGTCTTTGCTCA+TGG | + | chr7.4:29625285-29625304 | MS.gene96046:CDS | 35.0% |
!! | ACTGCTTTTGAAGACTTAGA+AGG | - | chr7.4:29626421-29626440 | None:intergenic | 35.0% |
!! | CGCTTTAAAACATATTGTGC+AGG | - | chr7.4:29626154-29626173 | None:intergenic | 35.0% |
!! | TATGCATTGGTCTTCAGTTT+GGG | + | chr7.4:29625502-29625521 | MS.gene96046:CDS | 35.0% |
!!! | AAGATTTTGGAGTTCTTAGG+TGG | + | chr7.4:29626097-29626116 | MS.gene96046:CDS | 35.0% |
!!! | AGACATCAGCTACTTTTGAT+TGG | + | chr7.4:29625156-29625175 | MS.gene96046:CDS | 35.0% |
!!! | CACAATATGTTTTAAAGCGG+TGG | + | chr7.4:29626155-29626174 | MS.gene96046:CDS | 35.0% |
AATCGAACAAGTGAATGGTC+TGG | - | chr7.4:29625608-29625627 | None:intergenic | 40.0% | |
ACCTATGATCTTTGCATAGC+TGG | - | chr7.4:29624950-29624969 | None:intergenic | 40.0% | |
AGTCGCTTCTTTGACCTAAT+TGG | - | chr7.4:29626499-29626518 | None:intergenic | 40.0% | |
ATGTCGTATGTTTGAGAACC+GGG | + | chr7.4:29626051-29626070 | MS.gene96046:CDS | 40.0% | |
ATTTCTCAACGGTGTTCTTG+AGG | + | chr7.4:29626330-29626349 | MS.gene96046:CDS | 40.0% | |
CATGTCGTATGTTTGAGAAC+CGG | + | chr7.4:29626050-29626069 | MS.gene96046:CDS | 40.0% | |
GATGTCTAAACTCGCAAACA+CGG | - | chr7.4:29624904-29624923 | None:intergenic | 40.0% | |
GATTTCAGCTTATCGACAGA+CGG | - | chr7.4:29626196-29626215 | None:intergenic | 40.0% | |
GTCTTTAGTGCCAACATTCA+TGG | - | chr7.4:29626221-29626240 | None:intergenic | 40.0% | |
TACATTTCAGCTGCCTTTCT+TGG | + | chr7.4:29625080-29625099 | MS.gene96046:intron | 40.0% | |
TCAAACCATATACACAGACC+AGG | + | chr7.4:29625220-29625239 | MS.gene96046:CDS | 40.0% | |
TCCAGCTATGCAAAGATCAT+AGG | + | chr7.4:29624946-29624965 | MS.gene96046:intron | 40.0% | |
TGGTCTGTGTATATGGTTTG+AGG | - | chr7.4:29625221-29625240 | None:intergenic | 40.0% | |
TTGAGGAGGACACAACAAAA+GGG | + | chr7.4:29625819-29625838 | MS.gene96046:CDS | 40.0% | |
TTTGAGGAGGACACAACAAA+AGG | + | chr7.4:29625818-29625837 | MS.gene96046:CDS | 40.0% | |
! | AATTGACTTCAACAACGCAC+CGG | - | chr7.4:29625246-29625265 | None:intergenic | 40.0% |
! | AGCCACTTAAAGTCTGAAGT+AGG | - | chr7.4:29625461-29625480 | None:intergenic | 40.0% |
! | GAGGGATAATCATGCTGATT+TGG | + | chr7.4:29625661-29625680 | MS.gene96046:CDS | 40.0% |
! | TGAAGACTTAGAAGGCGTAA+CGG | - | chr7.4:29626413-29626432 | None:intergenic | 40.0% |
! | TGGTTTAGAATTGAAGGCTC+TGG | + | chr7.4:29624699-29624718 | MS.gene96046:intron | 40.0% |
!! | GTATGCATTGGTCTTCAGTT+TGG | + | chr7.4:29625501-29625520 | MS.gene96046:CDS | 40.0% |
!! | GTTTTGGATGCAGAACTTGA+AGG | + | chr7.4:29625941-29625960 | MS.gene96046:CDS | 40.0% |
!! | TCACATGTTGGCCTGTTTTT+AGG | - | chr7.4:29624053-29624072 | None:intergenic | 40.0% |
!! | TCATGCTGATTTGGACTTCA+AGG | + | chr7.4:29625670-29625689 | MS.gene96046:CDS | 40.0% |
!! | TCTTATGAAGTGATGGGTGA+AGG | + | chr7.4:29624323-29624342 | MS.gene96046:CDS | 40.0% |
!!! | GCTAGTATTTTTTGGGCAGA+TGG | + | chr7.4:29624527-29624546 | MS.gene96046:CDS | 40.0% |
AATGAAGCTCTCTCGAAACC+AGG | + | chr7.4:29624464-29624483 | MS.gene96046:CDS | 45.0% | |
AGAACTGGACTGTCACATGT+TGG | - | chr7.4:29624065-29624084 | None:intergenic | 45.0% | |
ATCCCAACAGTCAGCTTATG+CGG | + | chr7.4:29625720-29625739 | MS.gene96046:CDS | 45.0% | |
ATTTGTGCTCTGTACAGCCA+TGG | + | chr7.4:29624832-29624851 | MS.gene96046:intron | 45.0% | |
CATGTCGACATAAGAAACCC+CGG | - | chr7.4:29626072-29626091 | None:intergenic | 45.0% | |
GAAAAACCAGAGGAAAGGGT+TGG | + | chr7.4:29624107-29624126 | MS.gene96046:CDS | 45.0% | |
GATCTTCAAACCTTGGGGAA+AGG | - | chr7.4:29625970-29625989 | None:intergenic | 45.0% | |
GATGACTCGTCAAAAGGAGA+TGG | + | chr7.4:29624403-29624422 | MS.gene96046:CDS | 45.0% | |
GGCCTACTTCAGACTTTAAG+TGG | + | chr7.4:29625456-29625475 | MS.gene96046:CDS | 45.0% | |
TGTCGTATGTTTGAGAACCG+GGG | + | chr7.4:29626052-29626071 | MS.gene96046:CDS | 45.0% | |
TGTCTTCTGCAGCATCAACT+TGG | - | chr7.4:29624505-29624524 | None:intergenic | 45.0% | |
TGTTCTTGAGGCAGGGAAAA+AGG | + | chr7.4:29626342-29626361 | MS.gene96046:CDS | 45.0% | |
TTACAACCAACCCTTTCCTC+TGG | - | chr7.4:29624116-29624135 | None:intergenic | 45.0% | |
TTGAAGGAAACCTTTCCCCA+AGG | + | chr7.4:29625957-29625976 | MS.gene96046:CDS | 45.0% | |
! | GTGAGGTCACATTTTACAGC+TGG | + | chr7.4:29625524-29625543 | MS.gene96046:CDS | 45.0% |
!! | ATTGGTCTTCAGTTTGGGTG+AGG | + | chr7.4:29625507-29625526 | MS.gene96046:CDS | 45.0% |
!! | GAAAGGGTTGGTTGTAAAGC+TGG | + | chr7.4:29624119-29624138 | MS.gene96046:CDS | 45.0% |
ACCATATACACAGACCAGGC+CGG | + | chr7.4:29625224-29625243 | MS.gene96046:CDS | 50.0% | |
CGCAAACACGTGTAGAAAGC+TGG | - | chr7.4:29626288-29626307 | None:intergenic | 50.0% | |
CTGTCTGTGAGCCATCTGTT+GGG | + | chr7.4:29626443-29626462 | MS.gene96046:CDS | 50.0% | |
GACCGCATAAGCTGACTGTT+GGG | - | chr7.4:29625725-29625744 | None:intergenic | 50.0% | |
GACTCGTCAAAAGGAGATGG+TGG | + | chr7.4:29624406-29624425 | MS.gene96046:CDS | 50.0% | |
GGGTTGTCACAGTCGACATT+AGG | + | chr7.4:29626008-29626027 | MS.gene96046:CDS | 50.0% | |
GGTCTTTGCTCATGGCACAT+GGG | + | chr7.4:29625293-29625312 | MS.gene96046:CDS | 50.0% | |
TACACGTGTTTGCGCAGATG+CGG | + | chr7.4:29626294-29626313 | MS.gene96046:CDS | 50.0% | |
TCAACGGTGTTCTTGAGGCA+GGG | + | chr7.4:29626335-29626354 | MS.gene96046:CDS | 50.0% | |
TGGGACTGCACCAAAGTTCA+AGG | + | chr7.4:29626462-29626481 | MS.gene96046:CDS | 50.0% | |
TGGTCTTTGCTCATGGCACA+TGG | + | chr7.4:29625292-29625311 | MS.gene96046:CDS | 50.0% | |
! | TTTGGTGCAGTCCCAACAGA+TGG | - | chr7.4:29626457-29626476 | None:intergenic | 50.0% |
!! | GAAGTGATGGGTGAAGGTGT+TGG | + | chr7.4:29624329-29624348 | MS.gene96046:CDS | 50.0% |
ACCGGCCTGGTCTGTGTATA+TGG | - | chr7.4:29625228-29625247 | None:intergenic | 55.0% | |
CTCAACGGTGTTCTTGAGGC+AGG | + | chr7.4:29626334-29626353 | MS.gene96046:CDS | 55.0% | |
GCTGTCTGTGAGCCATCTGT+TGG | + | chr7.4:29626442-29626461 | MS.gene96046:CDS | 55.0% | |
GGACCGCATAAGCTGACTGT+TGG | - | chr7.4:29625726-29625745 | None:intergenic | 55.0% | |
TGAGGCAGGGAAAAAGGCAG+AGG | + | chr7.4:29626348-29626367 | MS.gene96046:CDS | 55.0% | |
! | CGTCAAAAGGAGATGGTGGC+TGG | + | chr7.4:29624410-29624429 | MS.gene96046:CDS | 55.0% |
!! | GTGATGGGTGAAGGTGTTGG+AGG | + | chr7.4:29624332-29624351 | MS.gene96046:CDS | 55.0% |
ACGTGTTTGCGCAGATGCGG+AGG | + | chr7.4:29626297-29626316 | MS.gene96046:CDS | 60.0% | |
! | ACTTCAACAACGCACCGGCC+TGG | - | chr7.4:29625241-29625260 | None:intergenic | 60.0% |
!! | GGGTGAAGGTGTTGGAGGCA+CGG | + | chr7.4:29624337-29624356 | MS.gene96046:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.4 | gene | 29623753 | 29626986 | 29623753 | ID=MS.gene96046 |
chr7.4 | mRNA | 29623753 | 29626986 | 29623753 | ID=MS.gene96046.t1;Parent=MS.gene96046 |
chr7.4 | exon | 29623753 | 29624635 | 29623753 | ID=MS.gene96046.t1.exon1;Parent=MS.gene96046.t1 |
chr7.4 | CDS | 29623753 | 29624635 | 29623753 | ID=cds.MS.gene96046.t1;Parent=MS.gene96046.t1 |
chr7.4 | exon | 29625090 | 29626503 | 29625090 | ID=MS.gene96046.t1.exon2;Parent=MS.gene96046.t1 |
chr7.4 | CDS | 29625090 | 29626503 | 29625090 | ID=cds.MS.gene96046.t1;Parent=MS.gene96046.t1 |
chr7.4 | exon | 29626980 | 29626986 | 29626980 | ID=MS.gene96046.t1.exon3;Parent=MS.gene96046.t1 |
chr7.4 | CDS | 29626980 | 29626986 | 29626980 | ID=cds.MS.gene96046.t1;Parent=MS.gene96046.t1 |
Gene Sequence |
Protein sequence |