Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96389.t1 | XP_024630705.1 | 82.9 | 123 | 21 | 0 | 1 | 123 | 1 | 123 | 9.50E-50 | 206.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96389.t1 | Q8S9H7 | 54.2 | 48 | 22 | 0 | 69 | 116 | 129 | 176 | 5.9e-08 | 58.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96389.t1 | A0A072VIR9 | 62.7 | 83 | 2 | 1 | 70 | 123 | 10 | 92 | 1.4e-15 | 92.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene96389.t1 | TF | MYB-related |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96389.t1 | MTR_1g048660 | 63.415 | 82 | 1 | 1 | 71 | 123 | 11 | 92 | 5.59e-26 | 93.6 |
| MS.gene96389.t1 | MTR_4g100630 | 44.928 | 69 | 36 | 1 | 41 | 109 | 66 | 132 | 2.98e-13 | 64.7 |
| MS.gene96389.t1 | MTR_5g037080 | 32.000 | 125 | 67 | 4 | 3 | 109 | 15 | 139 | 1.58e-12 | 62.8 |
| MS.gene96389.t1 | MTR_3g104370 | 63.415 | 41 | 15 | 0 | 69 | 109 | 88 | 128 | 2.07e-12 | 61.6 |
| MS.gene96389.t1 | MTR_5g088010 | 75.000 | 36 | 9 | 0 | 74 | 109 | 62 | 97 | 4.99e-12 | 60.8 |
| MS.gene96389.t1 | MTR_5g088060 | 53.448 | 58 | 27 | 0 | 52 | 109 | 252 | 309 | 1.12e-11 | 60.8 |
| MS.gene96389.t1 | MTR_5g488160 | 53.448 | 58 | 27 | 0 | 52 | 109 | 252 | 309 | 1.12e-11 | 60.8 |
| MS.gene96389.t1 | MTR_2g100930 | 31.452 | 124 | 50 | 3 | 16 | 109 | 28 | 146 | 1.77e-11 | 60.1 |
| MS.gene96389.t1 | MTR_3g462790 | 60.976 | 41 | 16 | 0 | 69 | 109 | 144 | 184 | 1.89e-11 | 59.7 |
| MS.gene96389.t1 | MTR_5g069710 | 60.976 | 41 | 16 | 0 | 69 | 109 | 129 | 169 | 2.42e-11 | 59.3 |
| MS.gene96389.t1 | MTR_5g081860 | 50.000 | 60 | 29 | 1 | 50 | 109 | 104 | 162 | 5.11e-11 | 58.5 |
| MS.gene96389.t1 | MTR_4g107230 | 33.051 | 118 | 44 | 4 | 17 | 109 | 14 | 121 | 7.86e-11 | 57.8 |
| MS.gene96389.t1 | MTR_7g067080 | 60.976 | 41 | 16 | 0 | 69 | 109 | 137 | 177 | 8.90e-11 | 57.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96389.t1 | AT1G70000 | 37.736 | 106 | 54 | 3 | 12 | 109 | 34 | 135 | 2.57e-15 | 70.1 |
| MS.gene96389.t1 | AT1G70000 | 37.736 | 106 | 54 | 3 | 12 | 109 | 34 | 135 | 2.57e-15 | 70.1 |
| MS.gene96389.t1 | AT1G74840 | 33.898 | 118 | 50 | 2 | 14 | 109 | 22 | 133 | 5.14e-14 | 66.2 |
| MS.gene96389.t1 | AT1G74840 | 33.898 | 118 | 50 | 2 | 14 | 109 | 22 | 133 | 7.47e-14 | 66.2 |
| MS.gene96389.t1 | AT5G61620 | 40.179 | 112 | 49 | 5 | 16 | 109 | 34 | 145 | 2.14e-13 | 65.5 |
| MS.gene96389.t1 | AT5G47390 | 33.058 | 121 | 50 | 4 | 13 | 109 | 20 | 133 | 3.66e-12 | 62.0 |
| MS.gene96389.t1 | AT5G56840 | 32.000 | 125 | 76 | 1 | 1 | 116 | 11 | 135 | 9.21e-12 | 60.1 |
| MS.gene96389.t1 | AT5G58900 | 60.976 | 41 | 16 | 0 | 69 | 109 | 138 | 178 | 2.03e-11 | 59.7 |
| MS.gene96389.t1 | AT1G19000 | 31.746 | 126 | 46 | 3 | 16 | 109 | 22 | 139 | 6.69e-11 | 58.2 |
| MS.gene96389.t1 | AT1G19000 | 31.746 | 126 | 46 | 3 | 16 | 109 | 22 | 139 | 6.69e-11 | 58.2 |
Find 25 sgRNAs with CRISPR-Local
Find 328 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCTTTCTTGAAAGGTTTAA+AGG | 0.205247 | 1.3:-30910753 | MS.gene96389:CDS |
| GATAGGTGTGTGATGTTATT+TGG | 0.206265 | 1.3:-30913910 | MS.gene96389:CDS |
| CAACCATGTACACGTGAAAA+AGG | 0.250846 | 1.3:-30913758 | MS.gene96389:CDS |
| CAGACTAAAACTCTTGTTCA+TGG | 0.321234 | 1.3:+30913849 | None:intergenic |
| GGTTTAAAGGCTGTTGGAAA+AGG | 0.435483 | 1.3:-30910740 | MS.gene96389:CDS |
| TTGAAAGGTTTAAAGGCTGT+TGG | 0.453203 | 1.3:-30910746 | MS.gene96389:CDS |
| GAAAATCATGAATTTGATAC+TGG | 0.454021 | 1.3:-30913790 | MS.gene96389:CDS |
| TGGTGCTCCGTCCTTGTCCA+TGG | 0.462848 | 1.3:+30910776 | None:intergenic |
| TTAAACCTTTCAAGAAAGCC+TGG | 0.468661 | 1.3:+30910756 | None:intergenic |
| GAGCACCAGGCTTTCTTGAA+AGG | 0.474105 | 1.3:-30910761 | MS.gene96389:CDS |
| ATGGACAAGGACGGAGCACC+AGG | 0.487460 | 1.3:-30910774 | MS.gene96389:CDS |
| AATGAAAATTCAAAAGCTAC+TGG | 0.495544 | 1.3:-30910482 | MS.gene96389:CDS |
| AGGCTGTTGGAAAAGGCAAA+TGG | 0.496236 | 1.3:-30910733 | MS.gene96389:CDS |
| CGTACGATGAGAATGGTGAT+AGG | 0.529349 | 1.3:-30913927 | MS.gene96389:CDS |
| AGCAACCTGAGTAGGAGTCT+TGG | 0.550878 | 1.3:+30910682 | None:intergenic |
| CGTCTTTAAATTATTCGACA+TGG | 0.554516 | 1.3:+30913948 | None:intergenic |
| TTAAAGACGTACGATGAGAA+TGG | 0.562378 | 1.3:-30913934 | MS.gene96389:CDS |
| GGTGACCAAGACTCCTACTC+AGG | 0.568809 | 1.3:-30910687 | MS.gene96389:intron |
| ATGGTGTCATCATCTGTAGT+AGG | 0.601365 | 1.3:+30913868 | None:intergenic |
| CTGGTGCTTCATCTGTATAG+AGG | 0.606898 | 1.3:-30910463 | None:intergenic |
| CAAATGGAAGCGAATATCGA+AGG | 0.631038 | 1.3:-30910717 | MS.gene96389:CDS |
| GCATGACTAGCAACCTGAGT+AGG | 0.641227 | 1.3:+30910674 | None:intergenic |
| AGTAAAACCATGGACAAGGA+CGG | 0.641978 | 1.3:-30910783 | MS.gene96389:CDS |
| GTTGCATTATAGTAAAACCA+TGG | 0.650161 | 1.3:-30910793 | MS.gene96389:intron |
| TTATAGTAAAACCATGGACA+AGG | 0.693150 | 1.3:-30910787 | MS.gene96389:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAATAGTACAAAAAATTT+GGG | - | chr1.3:30911167-30911186 | MS.gene96389:intron | 10.0% |
| !!! | AATGATGTATTTAATTTATA+TGG | - | chr1.3:30911377-30911396 | MS.gene96389:intron | 10.0% |
| !!! | ACTCTTTTTTTTTTTTTTTA+AGG | - | chr1.3:30910832-30910851 | MS.gene96389:intron | 10.0% |
| !!! | ACTTTTTCTTATAAATAAAT+CGG | - | chr1.3:30911449-30911468 | MS.gene96389:intron | 10.0% |
| !! | AAAAGAAAAACAATTAAACT+AGG | - | chr1.3:30911644-30911663 | MS.gene96389:intron | 15.0% |
| !! | AAACATAACAATAACATTTA+TGG | - | chr1.3:30913123-30913142 | MS.gene96389:intron | 15.0% |
| !! | AGATTAATAGTAAACATAAA+TGG | - | chr1.3:30911299-30911318 | MS.gene96389:intron | 15.0% |
| !! | CATAAATAGTACAAAAAATT+TGG | - | chr1.3:30911166-30911185 | MS.gene96389:intron | 15.0% |
| !! | GTTTACTATTAATCTATTTA+GGG | + | chr1.3:30911294-30911313 | None:intergenic | 15.0% |
| !! | TAAATAGTACAAAAAATTTG+GGG | - | chr1.3:30911168-30911187 | MS.gene96389:intron | 15.0% |
| !! | TGTTTACTATTAATCTATTT+AGG | + | chr1.3:30911295-30911314 | None:intergenic | 15.0% |
| !!! | ATATATTTGTTTTTGCTATA+TGG | - | chr1.3:30910885-30910904 | MS.gene96389:intron | 15.0% |
| !!! | GTTAAATGTTTATTTTAACT+AGG | + | chr1.3:30911338-30911357 | None:intergenic | 15.0% |
| !!! | GTTTACTTTTAATCTATTTA+GGG | + | chr1.3:30911575-30911594 | None:intergenic | 15.0% |
| !!! | TATATTTGTTTTTGCTATAT+GGG | - | chr1.3:30910886-30910905 | MS.gene96389:intron | 15.0% |
| !!! | TATTTTTTTTTTAACAAACG+AGG | - | chr1.3:30911122-30911141 | MS.gene96389:intron | 15.0% |
| !!! | TGTTTACTTTTAATCTATTT+AGG | + | chr1.3:30911576-30911595 | None:intergenic | 15.0% |
| !! | ATATATAGAACAAACAAAGT+GGG | - | chr1.3:30911595-30911614 | MS.gene96389:intron | 20.0% |
| !! | ATATTGAACATTTAAACCAT+TGG | + | chr1.3:30913488-30913507 | None:intergenic | 20.0% |
| !! | TTTCTTATAAATAAATCGGA+GGG | - | chr1.3:30911453-30911472 | MS.gene96389:intron | 20.0% |
| !!! | AAAAAAAAAAAGAGTACACT+AGG | + | chr1.3:30910827-30910846 | None:intergenic | 20.0% |
| !!! | AAAAAAAAAAGAGTACACTA+GGG | + | chr1.3:30910826-30910845 | None:intergenic | 20.0% |
| !!! | AACATTTAACCATCATTTTA+TGG | - | chr1.3:30910698-30910717 | MS.gene96389:CDS | 20.0% |
| !!! | ATTAATCTCACTTTCTTTTA+TGG | - | chr1.3:30913563-30913582 | MS.gene96389:intron | 20.0% |
| !!! | ATTTTAGTTTTTTAGCCAAT+AGG | - | chr1.3:30911248-30911267 | MS.gene96389:intron | 20.0% |
| !!! | GTTTTAGAAACAAACAAAAT+TGG | - | chr1.3:30913258-30913277 | MS.gene96389:intron | 20.0% |
| !!! | GTTTTTCTTTTGTTTTTGAT+GGG | + | chr1.3:30911635-30911654 | None:intergenic | 20.0% |
| !!! | TGTTTTTCTTTTGTTTTTGA+TGG | + | chr1.3:30911636-30911655 | None:intergenic | 20.0% |
| !!! | TTGTTTTGGATTTTGATTTA+TGG | + | chr1.3:30912885-30912904 | None:intergenic | 20.0% |
| !!! | TTTTCTTATAAATAAATCGG+AGG | - | chr1.3:30911452-30911471 | MS.gene96389:intron | 20.0% |
| ! | AATGAAAATTCAAAAGCTAC+TGG | - | chr1.3:30913930-30913949 | MS.gene96389:CDS | 25.0% |
| ! | AATGACTATATTGCTTGATA+TGG | - | chr1.3:30913898-30913917 | MS.gene96389:CDS | 25.0% |
| ! | AGAACTATAGTATAACATGT+TGG | + | chr1.3:30910932-30910951 | None:intergenic | 25.0% |
| ! | ATATTGAACATTTAAACCAC+TGG | + | chr1.3:30913446-30913465 | None:intergenic | 25.0% |
| ! | ATCACTATAGGTTTACAATT+TGG | + | chr1.3:30912959-30912978 | None:intergenic | 25.0% |
| ! | CATATATAGAACAAACAAAG+TGG | - | chr1.3:30911594-30911613 | MS.gene96389:intron | 25.0% |
| ! | GAAAAAAGATTCATCATAGT+TGG | + | chr1.3:30912200-30912219 | None:intergenic | 25.0% |
| ! | GAAAATCATGAATTTGATAC+TGG | - | chr1.3:30910622-30910641 | MS.gene96389:intron | 25.0% |
| ! | TATATAGAACAAACAAAGTG+GGG | - | chr1.3:30911596-30911615 | MS.gene96389:intron | 25.0% |
| ! | TTCAATTAATAGAGTCTCAT+GGG | - | chr1.3:30912387-30912406 | MS.gene96389:intron | 25.0% |
| ! | TTTCAATTAATAGAGTCTCA+TGG | - | chr1.3:30912386-30912405 | MS.gene96389:intron | 25.0% |
| !! | ATCCAAAAACTAGTTTGAAT+GGG | + | chr1.3:30911739-30911758 | None:intergenic | 25.0% |
| !! | ATTTTGCTTCATGTTTATGA+TGG | + | chr1.3:30911511-30911530 | None:intergenic | 25.0% |
| !!! | ATGTTTATTTTAACTAGGAC+CGG | + | chr1.3:30911333-30911352 | None:intergenic | 25.0% |
| !!! | ATTCAAACTAGTTTTTGGAT+GGG | - | chr1.3:30911739-30911758 | MS.gene96389:intron | 25.0% |
| !!! | GGCTTTCTTTTATTTTAATC+TGG | - | chr1.3:30912426-30912445 | MS.gene96389:intron | 25.0% |
| !!! | TTTTATTTTAATCTGGCATG+CGG | - | chr1.3:30912433-30912452 | MS.gene96389:intron | 25.0% |
| !!! | TTTTGGTTCTAAATCTTGAT+TGG | + | chr1.3:30913403-30913422 | None:intergenic | 25.0% |
| ACTGATCATGGAATACAAAT+AGG | - | chr1.3:30911003-30911022 | MS.gene96389:intron | 30.0% | |
| ATGTGTGACATAACAAGAAT+TGG | - | chr1.3:30912977-30912996 | MS.gene96389:intron | 30.0% | |
| ATTAGATTCATTTCCTCTCT+TGG | - | chr1.3:30912531-30912550 | MS.gene96389:intron | 30.0% | |
| GAAGACACTAATAAATCTAC+GGG | + | chr1.3:30912222-30912241 | None:intergenic | 30.0% | |
| GAGGGAGTAAAAAAAAATTG+GGG | - | chr1.3:30911471-30911490 | MS.gene96389:intron | 30.0% | |
| GCATAACACAAGAATATGAT+CGG | + | chr1.3:30912285-30912304 | None:intergenic | 30.0% | |
| GGAAGACACTAATAAATCTA+CGG | + | chr1.3:30912223-30912242 | None:intergenic | 30.0% | |
| GGAGGGAGTAAAAAAAAATT+GGG | - | chr1.3:30911470-30911489 | MS.gene96389:intron | 30.0% | |
| GTAAAATAAAGCAACCCTAT+AGG | - | chr1.3:30911666-30911685 | MS.gene96389:intron | 30.0% | |
| GTTGCATTATAGTAAAACCA+TGG | - | chr1.3:30913619-30913638 | MS.gene96389:intron | 30.0% | |
| TCAATTAATAGAGTCTCATG+GGG | - | chr1.3:30912388-30912407 | MS.gene96389:intron | 30.0% | |
| TGCAAACAACCATAAAATGA+TGG | + | chr1.3:30910710-30910729 | None:intergenic | 30.0% | |
| TGTTATGTTTCTTGACTGAT+CGG | + | chr1.3:30913113-30913132 | None:intergenic | 30.0% | |
| TTATAGTAAAACCATGGACA+AGG | - | chr1.3:30913625-30913644 | MS.gene96389:intron | 30.0% | |
| ! | ATTTTGCTTCATGATCATGA+TGG | + | chr1.3:30911208-30911227 | None:intergenic | 30.0% |
| ! | CATCCAAAAACTAGTTTGAA+TGG | + | chr1.3:30911740-30911759 | None:intergenic | 30.0% |
| ! | CTAGGGTTTTTACAAAAAGA+AGG | + | chr1.3:30912848-30912867 | None:intergenic | 30.0% |
| ! | TAATTTTCTAGGTATGCCTA+TGG | - | chr1.3:30912041-30912060 | MS.gene96389:intron | 30.0% |
| ! | TCTTTTTGTAAAAACCCTAG+CGG | - | chr1.3:30912848-30912867 | MS.gene96389:intron | 30.0% |
| ! | TTTTCGTTTTCATACTCATC+AGG | + | chr1.3:30910607-30910626 | None:intergenic | 30.0% |
| ! | TTTTGCTTCATGATCATGAT+GGG | + | chr1.3:30911207-30911226 | None:intergenic | 30.0% |
| !! | TAAAAGCATCTCATCATACA+TGG | + | chr1.3:30913539-30913558 | None:intergenic | 30.0% |
| !!! | AAGCATTTTAATTACAGACG+TGG | - | chr1.3:30913765-30913784 | MS.gene96389:CDS | 30.0% |
| !!! | CATTCAAACTAGTTTTTGGA+TGG | - | chr1.3:30911738-30911757 | MS.gene96389:intron | 30.0% |
| !!! | GGTCTTTTGTTTTTCCTTTT+GGG | - | chr1.3:30912795-30912814 | MS.gene96389:intron | 30.0% |
| !!! | GTGGTTTGTTTTGTTTGTTT+GGG | - | chr1.3:30910756-30910775 | MS.gene96389:CDS | 30.0% |
| !!! | TGGTCTTTTGTTTTTCCTTT+TGG | - | chr1.3:30912794-30912813 | MS.gene96389:intron | 30.0% |
| !!! | TGGTTTGTTTTGTTTGTTTG+GGG | - | chr1.3:30910757-30910776 | MS.gene96389:CDS | 30.0% |
| !!! | TGTTATCGCTGTATGTTTTT+TGG | + | chr1.3:30913420-30913439 | None:intergenic | 30.0% |
| !!! | TTCAAACTAGTTTTTGGATG+GGG | - | chr1.3:30911740-30911759 | MS.gene96389:intron | 30.0% |
| !!! | TTTTCTGAGGTGTTTTGTTT+TGG | - | chr1.3:30910783-30910802 | MS.gene96389:CDS | 30.0% |
| AAAAGGGACATGATGTACTA+TGG | + | chr1.3:30912244-30912263 | None:intergenic | 35.0% | |
| AAATGAATCTAATCCGCTAG+TGG | + | chr1.3:30912524-30912543 | None:intergenic | 35.0% | |
| AACCATGTACACGTGAAAAA+GGG | - | chr1.3:30910655-30910674 | MS.gene96389:intron | 35.0% | |
| AACCATTGGATTGTCTCTTA+AGG | + | chr1.3:30913474-30913493 | None:intergenic | 35.0% | |
| AACCTTAAGAGACAATCCAA+TGG | - | chr1.3:30913469-30913488 | MS.gene96389:intron | 35.0% | |
| ACCACACTAAAGATGGAATT+GGG | + | chr1.3:30912307-30912326 | None:intergenic | 35.0% | |
| ACCTTATACCACACTAAAGA+TGG | + | chr1.3:30912314-30912333 | None:intergenic | 35.0% | |
| ACTATATTGCTTGATATGGC+AGG | - | chr1.3:30913902-30913921 | MS.gene96389:CDS | 35.0% | |
| AGCATCTCTTATACTGATCA+TGG | - | chr1.3:30910991-30911010 | MS.gene96389:intron | 35.0% | |
| ATCTCACTCAACACACAAAA+GGG | + | chr1.3:30912260-30912279 | None:intergenic | 35.0% | |
| ATGGTTTCTATAAATCCGCT+AGG | + | chr1.3:30912866-30912885 | None:intergenic | 35.0% | |
| CAGACTAAAACTCTTGTTCA+TGG | + | chr1.3:30910566-30910585 | None:intergenic | 35.0% | |
| CGGAGGGAGTAAAAAAAAAT+TGG | - | chr1.3:30911469-30911488 | MS.gene96389:intron | 35.0% | |
| CTAAGGTCAAAACTTTCACT+TGG | - | chr1.3:30912153-30912172 | MS.gene96389:intron | 35.0% | |
| CTTGACTGATCGGTTATAAA+TGG | + | chr1.3:30913103-30913122 | None:intergenic | 35.0% | |
| GATAGGTGTGTGATGTTATT+TGG | - | chr1.3:30910502-30910521 | MS.gene96389:intron | 35.0% | |
| GGCTTTCTTGAAAGGTTTAA+AGG | - | chr1.3:30913659-30913678 | MS.gene96389:intron | 35.0% | |
| GGTATTTCCTTGTTAGGATT+TGG | - | chr1.3:30911705-30911724 | MS.gene96389:intron | 35.0% | |
| GTTATGTCACACATCACTAT+AGG | + | chr1.3:30912971-30912990 | None:intergenic | 35.0% | |
| TACCACACTAAAGATGGAAT+TGG | + | chr1.3:30912308-30912327 | None:intergenic | 35.0% | |
| TATAAGGTGTGCAAGTGTTT+GGG | - | chr1.3:30912326-30912345 | MS.gene96389:intron | 35.0% | |
| TCATCATACATGGAAGGATA+GGG | + | chr1.3:30913529-30913548 | None:intergenic | 35.0% | |
| TCCACTATGAAGAACCTATA+GGG | + | chr1.3:30911683-30911702 | None:intergenic | 35.0% | |
| TCCATCTTTAGTGTGGTATA+AGG | - | chr1.3:30912310-30912329 | MS.gene96389:intron | 35.0% | |
| TGGTTTCTATAAATCCGCTA+GGG | + | chr1.3:30912865-30912884 | None:intergenic | 35.0% | |
| TTAAACCTTTCAAGAAAGCC+TGG | + | chr1.3:30913659-30913678 | None:intergenic | 35.0% | |
| TTAAAGACGTACGATGAGAA+TGG | - | chr1.3:30910478-30910497 | MS.gene96389:CDS | 35.0% | |
| TTCCACTATGAAGAACCTAT+AGG | + | chr1.3:30911684-30911703 | None:intergenic | 35.0% | |
| TTCTTTGTTGGAACCTATAG+AGG | - | chr1.3:30912617-30912636 | MS.gene96389:intron | 35.0% | |
| TTGAAAGGTTTAAAGGCTGT+TGG | - | chr1.3:30913666-30913685 | MS.gene96389:intron | 35.0% | |
| ! | ATAGGTTCTTCATAGTGGAA+AGG | - | chr1.3:30911684-30911703 | MS.gene96389:intron | 35.0% |
| ! | CAAAAACTAGTTTGAATGGG+AGG | + | chr1.3:30911736-30911755 | None:intergenic | 35.0% |
| ! | GGGTTTTTACAAAAAGAAGG+AGG | + | chr1.3:30912845-30912864 | None:intergenic | 35.0% |
| ! | TCTTCAGGTTTCAAAGTAGA+AGG | - | chr1.3:30911853-30911872 | MS.gene96389:intron | 35.0% |
| !! | AGGTTATTTCTTCGTTGTTG+AGG | - | chr1.3:30912108-30912127 | MS.gene96389:intron | 35.0% |
| !! | AGTGAAAGTTTTGACCTTAG+AGG | + | chr1.3:30912153-30912172 | None:intergenic | 35.0% |
| !! | CATGAACAAGAGTTTTAGTC+TGG | - | chr1.3:30910564-30910583 | MS.gene96389:intron | 35.0% |
| !! | CTTGTGTTTGTTATGGATGA+GGG | - | chr1.3:30911978-30911997 | MS.gene96389:intron | 35.0% |
| !! | GTGAAAGTTTTGACCTTAGA+GGG | + | chr1.3:30912152-30912171 | None:intergenic | 35.0% |
| !! | TCATTGTGTGGTTTGTTTGT+GGG | - | chr1.3:30912766-30912785 | MS.gene96389:intron | 35.0% |
| !! | TGGAAAGGTATTTCCTTGTT+AGG | - | chr1.3:30911699-30911718 | MS.gene96389:intron | 35.0% |
| !! | TTGTGTTTGTTATGGATGAG+GGG | - | chr1.3:30911979-30911998 | MS.gene96389:intron | 35.0% |
| !! | TTTAACAAACGAGGTGTTGA+TGG | - | chr1.3:30911131-30911150 | MS.gene96389:intron | 35.0% |
| !! | TTTGTTTCTAAAACCCGTGA+GGG | + | chr1.3:30913252-30913271 | None:intergenic | 35.0% |
| !!! | CGTAATGGTTTTATGTTTGC+AGG | - | chr1.3:30912479-30912498 | MS.gene96389:intron | 35.0% |
| !!! | CTCCCATTCAAACTAGTTTT+TGG | - | chr1.3:30911734-30911753 | MS.gene96389:intron | 35.0% |
| !!! | GAGGTGTTTTGTTTTGGTTA+GGG | - | chr1.3:30910789-30910808 | MS.gene96389:intron | 35.0% |
| !!! | GGTGGTTTGTTTTGTTTGTT+TGG | - | chr1.3:30910755-30910774 | MS.gene96389:CDS | 35.0% |
| !!! | TCTTGATTGGTTTTGTGTTC+TGG | + | chr1.3:30913390-30913409 | None:intergenic | 35.0% |
| !!! | TGAGGTGTTTTGTTTTGGTT+AGG | - | chr1.3:30910788-30910807 | MS.gene96389:intron | 35.0% |
| !!! | TTATTTTAACTAGGACCGGA+GGG | + | chr1.3:30911329-30911348 | None:intergenic | 35.0% |
| !!! | TTTATTTTAACTAGGACCGG+AGG | + | chr1.3:30911330-30911349 | None:intergenic | 35.0% |
| !!! | TTTGTTTTGTTTGTTTGGGG+TGG | - | chr1.3:30910760-30910779 | MS.gene96389:CDS | 35.0% |
| AAAACAACCACTTCCAAGAG+AGG | + | chr1.3:30912547-30912566 | None:intergenic | 40.0% | |
| AACAATCATTCAGACCCTCA+CGG | - | chr1.3:30913235-30913254 | MS.gene96389:intron | 40.0% | |
| AACATAAATGGTACTCCCTC+CGG | - | chr1.3:30911311-30911330 | MS.gene96389:intron | 40.0% | |
| AACTGACTAATCCCCTGAAA+GGG | + | chr1.3:30912744-30912763 | None:intergenic | 40.0% | |
| ACCCTATAGGTTCTTCATAG+TGG | - | chr1.3:30911679-30911698 | MS.gene96389:intron | 40.0% | |
| ACCGTTGTTCTCTATGAGTT+GGG | - | chr1.3:30912582-30912601 | MS.gene96389:intron | 40.0% | |
| AGCATCTCATCATACATGGA+AGG | + | chr1.3:30913535-30913554 | None:intergenic | 40.0% | |
| AGGGTCTGAATGATTGTTTG+TGG | + | chr1.3:30913233-30913252 | None:intergenic | 40.0% | |
| AGTAAAACCATGGACAAGGA+CGG | - | chr1.3:30913629-30913648 | MS.gene96389:intron | 40.0% | |
| ATCTAGTTACCTTCATGTGC+TGG | + | chr1.3:30913200-30913219 | None:intergenic | 40.0% | |
| CAAAATAATTCCGCCTCCAA+CGG | + | chr1.3:30911934-30911953 | None:intergenic | 40.0% | |
| CAAATGGAAGCGAATATCGA+AGG | - | chr1.3:30913695-30913714 | MS.gene96389:intron | 40.0% | |
| CAACCATGTACACGTGAAAA+AGG | - | chr1.3:30910654-30910673 | MS.gene96389:intron | 40.0% | |
| CACAAACAAACCACACAATG+AGG | + | chr1.3:30912767-30912786 | None:intergenic | 40.0% | |
| CATATCCATCTGCATCCTAT+TGG | + | chr1.3:30911266-30911285 | None:intergenic | 40.0% | |
| CATCTCACTCAACACACAAA+AGG | + | chr1.3:30912261-30912280 | None:intergenic | 40.0% | |
| CCTAGAAAATTACACCTCCT+CGG | + | chr1.3:30912033-30912052 | None:intergenic | 40.0% | |
| CTAGAAAATTACACCTCCTC+GGG | + | chr1.3:30912032-30912051 | None:intergenic | 40.0% | |
| CTCATCATACATGGAAGGAT+AGG | + | chr1.3:30913530-30913549 | None:intergenic | 40.0% | |
| GGGTCTGAATGATTGTTTGT+GGG | + | chr1.3:30913232-30913251 | None:intergenic | 40.0% | |
| GGTTTAAAGGCTGTTGGAAA+AGG | - | chr1.3:30913672-30913691 | MS.gene96389:intron | 40.0% | |
| GTATAAGGTGTGCAAGTGTT+TGG | - | chr1.3:30912325-30912344 | MS.gene96389:intron | 40.0% | |
| GTTGAAATCCGAAAGAGTTC+TGG | + | chr1.3:30913289-30913308 | None:intergenic | 40.0% | |
| TACAGCGATAACAAATCCAG+TGG | - | chr1.3:30913427-30913446 | MS.gene96389:intron | 40.0% | |
| TAGTGAAACGCACACACAAA+AGG | + | chr1.3:30911830-30911849 | None:intergenic | 40.0% | |
| TGATCGGTTATAAATGGTCG+TGG | + | chr1.3:30913097-30913116 | None:intergenic | 40.0% | |
| TGGATGAACCAGAACTCTTT+CGG | - | chr1.3:30913278-30913297 | MS.gene96389:intron | 40.0% | |
| TGTGGATATGATCGGAAGTT+CGG | - | chr1.3:30911883-30911902 | MS.gene96389:intron | 40.0% | |
| TTAGTCAGTTCCTCATTGTG+TGG | - | chr1.3:30912754-30912773 | MS.gene96389:intron | 40.0% | |
| TTATGGTTGTTTGCAGCTCT+TGG | - | chr1.3:30910715-30910734 | MS.gene96389:CDS | 40.0% | |
| TTCATGATCACCTTGAACGT+AGG | + | chr1.3:30913164-30913183 | None:intergenic | 40.0% | |
| TTCATTTCCTCTCTTGGAAG+TGG | - | chr1.3:30912537-30912556 | MS.gene96389:intron | 40.0% | |
| TTGTTGGAACCTATAGAGGT+TGG | - | chr1.3:30912621-30912640 | MS.gene96389:intron | 40.0% | |
| TTTAGCCAATAGGATGCAGA+TGG | - | chr1.3:30911258-30911277 | MS.gene96389:intron | 40.0% | |
| TTTGCTTCCAACTTGCGTTT+GGG | - | chr1.3:30910964-30910983 | MS.gene96389:intron | 40.0% | |
| ! | AAAAAAGAGTACACTAGGGC+CGG | + | chr1.3:30910822-30910841 | None:intergenic | 40.0% |
| ! | AAACTAGTTTGAATGGGAGG+TGG | + | chr1.3:30911733-30911752 | None:intergenic | 40.0% |
| ! | GCGAATATCGAAGGATTTTG+TGG | - | chr1.3:30913704-30913723 | MS.gene96389:intron | 40.0% |
| ! | GGTGGAACTAGTTTCTTTGT+TGG | - | chr1.3:30912605-30912624 | MS.gene96389:intron | 40.0% |
| ! | TAGCGTGTGGTTGATTGTTT+TGG | + | chr1.3:30912899-30912918 | None:intergenic | 40.0% |
| ! | TGTGGAGCTTGTGTTTGTTA+TGG | - | chr1.3:30911971-30911990 | MS.gene96389:intron | 40.0% |
| ! | TTCCTTCTGGGAGGATATAT+GGG | - | chr1.3:30911794-30911813 | MS.gene96389:intron | 40.0% |
| ! | TTTTGCTTCCAACTTGCGTT+TGG | - | chr1.3:30910963-30910982 | MS.gene96389:intron | 40.0% |
| ! | TTTTGTGTGTGCGTTTCACT+AGG | - | chr1.3:30911829-30911848 | MS.gene96389:intron | 40.0% |
| !! | AGGCGGAATTATTTTGTGAG+TGG | - | chr1.3:30911938-30911957 | MS.gene96389:intron | 40.0% |
| !! | ATGGTGTCATCATCTGTAGT+AGG | + | chr1.3:30910547-30910566 | None:intergenic | 40.0% |
| !! | CGGAATTATTTTGTGAGTGG+AGG | - | chr1.3:30911941-30911960 | MS.gene96389:intron | 40.0% |
| !! | CTCATTGTGTGGTTTGTTTG+TGG | - | chr1.3:30912765-30912784 | MS.gene96389:intron | 40.0% |
| !! | CTTCATGATCATGATGGGTA+AGG | + | chr1.3:30911202-30911221 | None:intergenic | 40.0% |
| !! | CTTTTTCACGTGTACATGGT+TGG | + | chr1.3:30910656-30910675 | None:intergenic | 40.0% |
| !! | GCTTGTGTTTGTTATGGATG+AGG | - | chr1.3:30911977-30911996 | MS.gene96389:intron | 40.0% |
| !! | GTTTGTTTCTAAAACCCGTG+AGG | + | chr1.3:30913253-30913272 | None:intergenic | 40.0% |
| !! | TACCCTTTTTCACGTGTACA+TGG | + | chr1.3:30910660-30910679 | None:intergenic | 40.0% |
| !! | TGGTTGTTTTGTAGACACCT+TGG | - | chr1.3:30912557-30912576 | MS.gene96389:intron | 40.0% |
| !! | TGTGTTTGTTATGGATGAGG+GGG | - | chr1.3:30911980-30911999 | MS.gene96389:intron | 40.0% |
| !! | TTGGTTAGTGGCGTTTTGTT+TGG | - | chr1.3:30910734-30910753 | MS.gene96389:CDS | 40.0% |
| AAAGTAGAAGGCAGAGTGTG+TGG | - | chr1.3:30911865-30911884 | MS.gene96389:intron | 45.0% | |
| AACCCATATATCCTCCCAGA+AGG | + | chr1.3:30911799-30911818 | None:intergenic | 45.0% | |
| AATACAGAACCACACGAAGG+GGG | - | chr1.3:30913315-30913334 | MS.gene96389:intron | 45.0% | |
| AATAGAGTCTCATGGGGAGA+GGG | - | chr1.3:30912394-30912413 | MS.gene96389:intron | 45.0% | |
| ACAATCATTCAGACCCTCAC+GGG | - | chr1.3:30913236-30913255 | MS.gene96389:intron | 45.0% | |
| ACCAATACAGAACCACACGA+AGG | - | chr1.3:30913312-30913331 | MS.gene96389:intron | 45.0% | |
| AGGCTGTTGGAAAAGGCAAA+TGG | - | chr1.3:30913679-30913698 | MS.gene96389:intron | 45.0% | |
| ATAGAGAACAACGGTGACCA+AGG | + | chr1.3:30912577-30912596 | None:intergenic | 45.0% | |
| CAATACAGAACCACACGAAG+GGG | - | chr1.3:30913314-30913333 | MS.gene96389:intron | 45.0% | |
| CACCGTTGTTCTCTATGAGT+TGG | - | chr1.3:30912581-30912600 | MS.gene96389:intron | 45.0% | |
| CCAATACAGAACCACACGAA+GGG | - | chr1.3:30913313-30913332 | MS.gene96389:intron | 45.0% | |
| CCCCAACTCATAGAGAACAA+CGG | + | chr1.3:30912586-30912605 | None:intergenic | 45.0% | |
| CCGTTGTTCTCTATGAGTTG+GGG | - | chr1.3:30912583-30912602 | MS.gene96389:intron | 45.0% | |
| CGTACGATGAGAATGGTGAT+AGG | - | chr1.3:30910485-30910504 | MS.gene96389:CDS | 45.0% | |
| GAACTGACTAATCCCCTGAA+AGG | + | chr1.3:30912745-30912764 | None:intergenic | 45.0% | |
| GCAGAGTGTGTGGATATGAT+CGG | - | chr1.3:30911875-30911894 | MS.gene96389:intron | 45.0% | |
| GCCCAATTCCATCTTTAGTG+TGG | - | chr1.3:30912303-30912322 | MS.gene96389:intron | 45.0% | |
| GTGGATATGATCGGAAGTTC+GGG | - | chr1.3:30911884-30911903 | MS.gene96389:intron | 45.0% | |
| GTTTGCAGGTAAACCTGTTG+AGG | - | chr1.3:30912493-30912512 | MS.gene96389:intron | 45.0% | |
| TAAATGGTCGTGGCGAGAAA+TGG | + | chr1.3:30913087-30913106 | None:intergenic | 45.0% | |
| TAATAGAGTCTCATGGGGAG+AGG | - | chr1.3:30912393-30912412 | MS.gene96389:intron | 45.0% | |
| TAGTTACCTTCATGTGCTGG+TGG | + | chr1.3:30913197-30913216 | None:intergenic | 45.0% | |
| TCACCTTCACCAACCTCTAT+AGG | + | chr1.3:30912633-30912652 | None:intergenic | 45.0% | |
| TGGGATGTCAACTTCCTTCT+GGG | - | chr1.3:30911782-30911801 | MS.gene96389:intron | 45.0% | |
| TGTTGAGGTTAAGCCACTAG+CGG | - | chr1.3:30912508-30912527 | MS.gene96389:intron | 45.0% | |
| TGTTTGCAGCTCTTGGTTAG+TGG | - | chr1.3:30910722-30910741 | MS.gene96389:CDS | 45.0% | |
| TTTCTTCGTTGTTGAGGTCG+TGG | - | chr1.3:30912114-30912133 | MS.gene96389:intron | 45.0% | |
| TTTGTTACCGTGTTGGAGGT+CGG | + | chr1.3:30913031-30913050 | None:intergenic | 45.0% | |
| ! | AAAGGGTTTCACTCGGCTTT+TGG | + | chr1.3:30912727-30912746 | None:intergenic | 45.0% |
| ! | AAGGGTTTCACTCGGCTTTT+GGG | + | chr1.3:30912726-30912745 | None:intergenic | 45.0% |
| ! | AAGTTCGGGAGAAGTTGGTT+GGG | - | chr1.3:30911898-30911917 | MS.gene96389:intron | 45.0% |
| ! | CGTTGTTCTCTATGAGTTGG+GGG | - | chr1.3:30912584-30912603 | MS.gene96389:intron | 45.0% |
| ! | CTTCCTTCTGGGAGGATATA+TGG | - | chr1.3:30911793-30911812 | MS.gene96389:intron | 45.0% |
| ! | GTTGGTGAAGGTGATTGAGT+TGG | - | chr1.3:30912639-30912658 | MS.gene96389:intron | 45.0% |
| ! | TTCTGGGAGGATATATGGGT+TGG | - | chr1.3:30911798-30911817 | MS.gene96389:intron | 45.0% |
| !! | CCGAGGAGGTGTAATTTTCT+AGG | - | chr1.3:30912030-30912049 | MS.gene96389:intron | 45.0% |
| !! | CGTGTGGTTCTGTATTGGTT+TGG | + | chr1.3:30913311-30913330 | None:intergenic | 45.0% |
| !! | GAACCTATAGAGGTTGGTGA+AGG | - | chr1.3:30912627-30912646 | MS.gene96389:intron | 45.0% |
| !! | GAGAGTTTGCTGTATTGTGG+AGG | + | chr1.3:30913062-30913081 | None:intergenic | 45.0% |
| !! | GCATGGATTTGTTACCGTGT+TGG | + | chr1.3:30913038-30913057 | None:intergenic | 45.0% |
| !! | GCTGAGAGTTTGCTGTATTG+TGG | + | chr1.3:30913065-30913084 | None:intergenic | 45.0% |
| !! | GGAGGATATATGGGTTGGTA+AGG | - | chr1.3:30911803-30911822 | MS.gene96389:intron | 45.0% |
| !! | TGGATTTGTTACCGTGTTGG+AGG | + | chr1.3:30913035-30913054 | None:intergenic | 45.0% |
| !! | TTGTTTGGGGTGGTTTTCTG+AGG | - | chr1.3:30910770-30910789 | MS.gene96389:CDS | 45.0% |
| !! | TTTTGGTTAGGGCTCTTTGC+CGG | - | chr1.3:30910800-30910819 | MS.gene96389:intron | 45.0% |
| !!! | ACTAGTTTTTGGATGGGGTG+AGG | - | chr1.3:30911745-30911764 | MS.gene96389:intron | 45.0% |
| !!! | GTTAGTGGCGTTTTGTTTGG+TGG | - | chr1.3:30910737-30910756 | MS.gene96389:CDS | 45.0% |
| !!! | TTCCTTTTGGGACTTCGTTC+TGG | - | chr1.3:30912807-30912826 | MS.gene96389:intron | 45.0% |
| AACCATTACGAGCCTTCCAG+AGG | + | chr1.3:30912469-30912488 | None:intergenic | 50.0% | |
| AAGCCGAGTGAAACCCTTTC+AGG | - | chr1.3:30912728-30912747 | MS.gene96389:intron | 50.0% | |
| ACACACACACACACACACAC+AGG | + | chr1.3:30912671-30912690 | None:intergenic | 50.0% | |
| ACACACACACACACACAGGT+CGG | + | chr1.3:30912667-30912686 | None:intergenic | 50.0% | |
| ACACGCTACTAGCACAATCC+AGG | - | chr1.3:30912911-30912930 | MS.gene96389:intron | 50.0% | |
| ACCATTACGAGCCTTCCAGA+GGG | + | chr1.3:30912468-30912487 | None:intergenic | 50.0% | |
| AGAAAGCCACCAGCACATGA+AGG | - | chr1.3:30913188-30913207 | MS.gene96389:intron | 50.0% | |
| AGCAACCTGAGTAGGAGTCT+TGG | + | chr1.3:30913733-30913752 | None:intergenic | 50.0% | |
| AGCCGAGTGAAACCCTTTCA+GGG | - | chr1.3:30912729-30912748 | MS.gene96389:intron | 50.0% | |
| AGGTGTGCAAGTGTTTGGGT+TGG | - | chr1.3:30912330-30912349 | MS.gene96389:intron | 50.0% | |
| AGTGAATCCGACCTCCAACA+CGG | - | chr1.3:30913021-30913040 | MS.gene96389:intron | 50.0% | |
| ATCGGAAGTTCGGGAGAAGT+TGG | - | chr1.3:30911893-30911912 | MS.gene96389:intron | 50.0% | |
| CACGCTACTAGCACAATCCA+GGG | - | chr1.3:30912912-30912931 | MS.gene96389:intron | 50.0% | |
| GAGCACCAGGCTTTCTTGAA+AGG | - | chr1.3:30913651-30913670 | MS.gene96389:intron | 50.0% | |
| GATGTCAACTTCCTTCTGGG+AGG | - | chr1.3:30911785-30911804 | MS.gene96389:intron | 50.0% | |
| GCATGACTAGCAACCTGAGT+AGG | + | chr1.3:30913741-30913760 | None:intergenic | 50.0% | |
| GCTAGTGGCTTAACCTCAAC+AGG | + | chr1.3:30912509-30912528 | None:intergenic | 50.0% | |
| GCTCTAACCCAAACGCAAGT+TGG | + | chr1.3:30910974-30910993 | None:intergenic | 50.0% | |
| GGTGGCACCAAATCCTAACA+AGG | + | chr1.3:30911715-30911734 | None:intergenic | 50.0% | |
| GTGAGTGGAGGATCTGTTTG+TGG | - | chr1.3:30911953-30911972 | MS.gene96389:intron | 50.0% | |
| GTGGGATGTCAACTTCCTTC+TGG | - | chr1.3:30911781-30911800 | MS.gene96389:intron | 50.0% | |
| GTGTGTGTGTGTGTGTGTGT+GGG | - | chr1.3:30912671-30912690 | MS.gene96389:intron | 50.0% | |
| GTTGAGGTCGTGGAAGAGTT+GGG | - | chr1.3:30912124-30912143 | MS.gene96389:intron | 50.0% | |
| TAATCTGGCATGCGGTTGTG+TGG | - | chr1.3:30912441-30912460 | MS.gene96389:intron | 50.0% | |
| TCCCCTGAAAGGGTTTCACT+CGG | + | chr1.3:30912734-30912753 | None:intergenic | 50.0% | |
| TGAAGCAGCACCTACGTTCA+AGG | - | chr1.3:30913151-30913170 | MS.gene96389:intron | 50.0% | |
| TGCGTTTCACTAGGCTCTTC+AGG | - | chr1.3:30911838-30911857 | MS.gene96389:intron | 50.0% | |
| TGGATTGTGCTAGTAGCGTG+TGG | + | chr1.3:30912912-30912931 | None:intergenic | 50.0% | |
| TGTGTGTGTGTGTGTGTGTG+TGG | - | chr1.3:30912670-30912689 | MS.gene96389:intron | 50.0% | |
| TGTTGAGGTCGTGGAAGAGT+TGG | - | chr1.3:30912123-30912142 | MS.gene96389:intron | 50.0% | |
| TTTGAGCCGTTGTTGGGTGA+GGG | - | chr1.3:30912071-30912090 | MS.gene96389:intron | 50.0% | |
| ! | CATGTGCTGGTGGCTTTCTT+TGG | + | chr1.3:30913187-30913206 | None:intergenic | 50.0% |
| ! | CCCTTCGTGTGGTTCTGTAT+TGG | + | chr1.3:30913316-30913335 | None:intergenic | 50.0% |
| ! | GAAGTTCGGGAGAAGTTGGT+TGG | - | chr1.3:30911897-30911916 | MS.gene96389:intron | 50.0% |
| ! | GGGAGAAGTTGGTTGGGTTT+AGG | - | chr1.3:30911904-30911923 | MS.gene96389:intron | 50.0% |
| ! | GGTGTGCAAGTGTTTGGGTT+GGG | - | chr1.3:30912331-30912350 | MS.gene96389:intron | 50.0% |
| ! | GTTGGGTTTAGGATCTCCGT+TGG | - | chr1.3:30911915-30911934 | MS.gene96389:intron | 50.0% |
| ! | TGCTGTATTGTGGAGGTGCA+TGG | + | chr1.3:30913055-30913074 | None:intergenic | 50.0% |
| ! | TGTTCTCTATGAGTTGGGGG+TGG | - | chr1.3:30912587-30912606 | MS.gene96389:intron | 50.0% |
| ! | TTTAGGATCTCCGTTGGAGG+CGG | - | chr1.3:30911921-30911940 | MS.gene96389:intron | 50.0% |
| !! | GTGCTGTTTGAGCCGTTGTT+GGG | - | chr1.3:30912065-30912084 | MS.gene96389:intron | 50.0% |
| !! | GTTTGTTATGGATGAGGGGG+AGG | - | chr1.3:30911983-30912002 | MS.gene96389:intron | 50.0% |
| !! | GTTTTTGGATGGGGTGAGGA+AGG | - | chr1.3:30911749-30911768 | MS.gene96389:intron | 50.0% |
| !! | TGTGCTGTTTGAGCCGTTGT+TGG | - | chr1.3:30912064-30912083 | MS.gene96389:intron | 50.0% |
| ACGCACTCCAATCCGACAAG+TGG | - | chr1.3:30913340-30913359 | MS.gene96389:intron | 55.0% | |
| AGGGGGAGGATTTGTGGAAG+TGG | - | chr1.3:30911997-30912016 | MS.gene96389:intron | 55.0% | |
| CACTCCAATCCGACAAGTGG+TGG | - | chr1.3:30913343-30913362 | MS.gene96389:intron | 55.0% | |
| CGCCAGAACGAAGTCCCAAA+AGG | + | chr1.3:30912812-30912831 | None:intergenic | 55.0% | |
| CGGCTCAAACAGCACACCAT+AGG | + | chr1.3:30912060-30912079 | None:intergenic | 55.0% | |
| CTAGAGCCCTCACCCAACAA+CGG | + | chr1.3:30912080-30912099 | None:intergenic | 55.0% | |
| GAAGAGTTGGGCTCCCTCTA+AGG | - | chr1.3:30912136-30912155 | MS.gene96389:intron | 55.0% | |
| GAGACTCCTCCACCACTTGT+CGG | + | chr1.3:30913355-30913374 | None:intergenic | 55.0% | |
| GCCGAGTGAAACCCTTTCAG+GGG | - | chr1.3:30912730-30912749 | MS.gene96389:intron | 55.0% | |
| GGGGGAGGATTTGTGGAAGT+GGG | - | chr1.3:30911998-30912017 | MS.gene96389:intron | 55.0% | |
| GGTGACCAAGACTCCTACTC+AGG | - | chr1.3:30913725-30913744 | MS.gene96389:intron | 55.0% | |
| GTGTGTGTGTGTGTGTGGGT+GGG | - | chr1.3:30912685-30912704 | MS.gene96389:intron | 55.0% | |
| GTTTGAGCCGTTGTTGGGTG+AGG | - | chr1.3:30912070-30912089 | MS.gene96389:intron | 55.0% | |
| TCCAATCCGACAAGTGGTGG+AGG | - | chr1.3:30913346-30913365 | MS.gene96389:intron | 55.0% | |
| TCCTCCACCACTTGTCGGAT+TGG | + | chr1.3:30913350-30913369 | None:intergenic | 55.0% | |
| TGAGGAAGGTGGTCAGGAGT+GGG | - | chr1.3:30911763-30911782 | MS.gene96389:intron | 55.0% | |
| TGGATGAGGGGGAGGATTTG+TGG | - | chr1.3:30911991-30912010 | MS.gene96389:intron | 55.0% | |
| TGTGTGTGTGTGTGTGGGTG+GGG | - | chr1.3:30912686-30912705 | MS.gene96389:intron | 55.0% | |
| TGTGTGTGTGTGTGTGTGGG+TGG | - | chr1.3:30912684-30912703 | MS.gene96389:intron | 55.0% | |
| TTTGGATGGGGTGAGGAAGG+TGG | - | chr1.3:30911752-30911771 | MS.gene96389:intron | 55.0% | |
| ! | ACCCTCTGGAAGGCTCGTAA+TGG | - | chr1.3:30912464-30912483 | MS.gene96389:intron | 55.0% |
| ! | CAATCCAGGGCACTCGAGTA+CGG | - | chr1.3:30912925-30912944 | MS.gene96389:intron | 55.0% |
| ! | GAAGTGGGAGCATAATCCCG+AGG | - | chr1.3:30912013-30912032 | MS.gene96389:intron | 55.0% |
| ! | GGGTTGGGAGCTGGTTCTTA+CGG | - | chr1.3:30912346-30912365 | MS.gene96389:intron | 55.0% |
| ! | GGGTTTAGGATCTCCGTTGG+AGG | - | chr1.3:30911918-30911937 | MS.gene96389:intron | 55.0% |
| ! | GGTTGGGAGCTGGTTCTTAC+GGG | - | chr1.3:30912347-30912366 | MS.gene96389:intron | 55.0% |
| ! | GTTGGGAGCTGGTTCTTACG+GGG | - | chr1.3:30912348-30912367 | MS.gene96389:intron | 55.0% |
| !! | CAAGTGTTTGGGTTGGGAGC+TGG | - | chr1.3:30912337-30912356 | MS.gene96389:intron | 55.0% |
| !! | GTTGGGTGAGGGCTCTAGAT+CGG | - | chr1.3:30912082-30912101 | MS.gene96389:intron | 55.0% |
| !! | TGGTTTGTTTGTGGGTGCGC+TGG | - | chr1.3:30912774-30912793 | MS.gene96389:intron | 55.0% |
| ACATCCGTACTCGAGTGCCC+TGG | + | chr1.3:30912932-30912951 | None:intergenic | 60.0% | |
| AGTCTCATGGGGAGAGGGCT+AGG | - | chr1.3:30912399-30912418 | MS.gene96389:intron | 60.0% | |
| ATGCGGTTGTGTGGACCCTC+TGG | - | chr1.3:30912450-30912469 | MS.gene96389:intron | 60.0% | |
| ATGGGGTGAGGAAGGTGGTC+AGG | - | chr1.3:30911757-30911776 | MS.gene96389:intron | 60.0% | |
| GGTTGTGTGGACCCTCTGGA+AGG | - | chr1.3:30912454-30912473 | MS.gene96389:intron | 60.0% | |
| GTCTCATGGGGAGAGGGCTA+GGG | - | chr1.3:30912400-30912419 | MS.gene96389:intron | 60.0% | |
| GTGAGGAAGGTGGTCAGGAG+TGG | - | chr1.3:30911762-30911781 | MS.gene96389:intron | 60.0% | |
| GTGTGTGTGTGTGTGGGTGG+GGG | - | chr1.3:30912687-30912706 | MS.gene96389:intron | 60.0% | |
| TCTCATGGGGAGAGGGCTAG+GGG | - | chr1.3:30912401-30912420 | MS.gene96389:intron | 60.0% | |
| TGGTGCTCCGTCCTTGTCCA+TGG | + | chr1.3:30913639-30913658 | None:intergenic | 60.0% | |
| TGTGTGTGTGTGTGGGTGGG+GGG | - | chr1.3:30912688-30912707 | MS.gene96389:intron | 60.0% | |
| ! | ATGGACAAGGACGGAGCACC+AGG | - | chr1.3:30913638-30913657 | MS.gene96389:intron | 60.0% |
| ! | GTGGGAGCATAATCCCGAGG+AGG | - | chr1.3:30912016-30912035 | MS.gene96389:intron | 60.0% |
| !! | TGAGGGCTCTAGATCGGAGG+AGG | - | chr1.3:30912088-30912107 | MS.gene96389:intron | 60.0% |
| ATGGGGAGAGGGCTAGGGGT+AGG | - | chr1.3:30912405-30912424 | MS.gene96389:intron | 65.0% | |
| GTGTGTGGGTGGGGGGACTT+TGG | - | chr1.3:30912695-30912714 | MS.gene96389:intron | 65.0% | |
| !! | GGGTGAGGGCTCTAGATCGG+AGG | - | chr1.3:30912085-30912104 | MS.gene96389:intron | 65.0% |
| AGTGCGTCGCCCCCTTCGTG+TGG | + | chr1.3:30913327-30913346 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 30910466 | 30913968 | 30910466 | ID=MS.gene96389 |
| chr1.3 | mRNA | 30910466 | 30913968 | 30910466 | ID=MS.gene96389.t1;Parent=MS.gene96389 |
| chr1.3 | exon | 30913758 | 30913968 | 30913758 | ID=MS.gene96389.t1.exon1;Parent=MS.gene96389.t1 |
| chr1.3 | CDS | 30913758 | 30913968 | 30913758 | ID=cds.MS.gene96389.t1;Parent=MS.gene96389.t1 |
| chr1.3 | exon | 30910688 | 30910803 | 30910688 | ID=MS.gene96389.t1.exon2;Parent=MS.gene96389.t1 |
| chr1.3 | CDS | 30910688 | 30910803 | 30910688 | ID=cds.MS.gene96389.t1;Parent=MS.gene96389.t1 |
| chr1.3 | exon | 30910466 | 30910510 | 30910466 | ID=MS.gene96389.t1.exon3;Parent=MS.gene96389.t1 |
| chr1.3 | CDS | 30910466 | 30910510 | 30910466 | ID=cds.MS.gene96389.t1;Parent=MS.gene96389.t1 |
| Gene Sequence |
| Protein sequence |
