AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene96441

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene96441.t1 MTR_6g051425 30.182 275 175 6 50 311 19 289 5.63e-35 136
MS.gene96441.t1 MTR_0856s0010 43.023 172 84 4 3 173 2 160 4.31e-33 125
MS.gene96441.t1 MTR_4g035820 30.405 296 180 12 9 288 39 324 9.16e-24 107
MS.gene96441.t1 MTR_0558s0020 25.952 289 180 8 30 284 8 296 1.11e-21 96.7
MS.gene96441.t1 MTR_1g070355 28.936 235 152 7 54 278 80 309 2.19e-20 96.3
MS.gene96441.t1 MTR_7g446060 51.220 82 40 0 130 211 7 88 5.73e-20 87.0
MS.gene96441.t1 MTR_3g450850 26.829 287 191 8 2 272 3 286 2.01e-17 85.1
MS.gene96441.t1 MTR_8g446020 24.419 258 173 5 34 284 14 256 2.87e-17 82.8
MS.gene96441.t1 MTR_7g446480 31.977 172 116 1 122 292 143 314 4.94e-17 83.2
MS.gene96441.t1 MTR_6g022070 28.966 145 99 1 338 482 1 141 5.27e-17 83.6
MS.gene96441.t1 MTR_1g008290 32.331 133 88 1 108 240 14 144 9.82e-17 78.2
MS.gene96441.t1 MTR_7g446510 32.530 166 111 1 128 292 164 329 1.93e-16 82.0
MS.gene96441.t1 MTR_7g446520 25.847 236 162 2 52 286 92 315 3.20e-16 81.3
MS.gene96441.t1 MTR_7g115320 61.111 54 18 1 137 190 9 59 8.75e-15 70.9
MS.gene96441.t1 MTR_1g083640 23.897 272 173 8 18 255 11 282 3.33e-14 74.3
MS.gene96441.t1 MTR_1g019850 29.697 165 99 6 17 175 43 196 1.23e-13 71.6
MS.gene96441.t1 MTR_3g012160 41.975 81 46 1 193 273 14 93 1.41e-13 67.4
MS.gene96441.t1 MTR_5g023310 28.662 157 43 3 179 334 16 104 2.94e-13 67.0
MS.gene96441.t1 MTR_5g076070 23.552 259 185 7 23 272 28 282 4.74e-13 70.9
MS.gene96441.t1 MTR_6g090505 25.843 178 129 2 109 283 53 230 2.20e-12 69.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene96441.t1 AT4G15090 31.744 734 460 13 48 771 51 753 1.48e-122 388
MS.gene96441.t1 AT4G15090 31.744 734 460 13 48 771 51 753 1.48e-122 388
MS.gene96441.t1 AT4G15090 31.744 734 460 13 48 771 51 753 1.48e-122 388
MS.gene96441.t1 AT4G15090 31.744 734 460 13 48 771 51 753 1.48e-122 388
MS.gene96441.t1 AT4G15090 31.744 734 460 13 48 771 51 753 1.48e-122 388
MS.gene96441.t1 AT4G38180 34.375 640 388 12 8 631 38 661 2.13e-119 378
MS.gene96441.t1 AT3G22170 29.910 779 470 14 18 770 35 763 7.77e-111 357
MS.gene96441.t1 AT3G22170 29.910 779 470 14 18 770 35 763 7.77e-111 357
MS.gene96441.t1 AT1G76320 32.198 587 374 9 52 633 1 568 4.68e-105 337
MS.gene96441.t1 AT1G76320 32.198 587 374 9 52 633 1 568 1.24e-104 338
MS.gene96441.t1 AT1G76320 32.198 587 374 9 52 633 1 568 1.27e-104 338
MS.gene96441.t1 AT1G76320 32.198 587 374 9 52 633 1 568 1.27e-104 338
MS.gene96441.t1 AT1G52520 32.538 587 371 12 33 607 66 639 5.69e-104 335
MS.gene96441.t1 AT2G27110 31.803 610 363 14 48 645 49 617 1.34e-93 311
MS.gene96441.t1 AT2G27110 31.803 610 363 14 48 645 49 617 1.34e-93 311
MS.gene96441.t1 AT3G06250 33.393 563 323 14 48 606 190 704 1.35e-92 306
MS.gene96441.t1 AT3G06250 33.393 563 323 14 48 606 190 704 1.35e-92 306
MS.gene96441.t1 AT3G06250 33.393 563 323 14 48 606 190 704 1.35e-92 306
MS.gene96441.t1 AT1G80010 32.392 602 359 13 39 610 82 665 1.62e-90 300
MS.gene96441.t1 AT2G27110 34.937 478 288 9 172 645 14 472 6.12e-89 295
MS.gene96441.t1 AT5G18960 32.060 602 354 16 28 622 192 745 6.62e-86 289
MS.gene96441.t1 AT5G18960 32.060 602 354 16 28 622 192 745 6.62e-86 289
MS.gene96441.t1 AT2G32250 34.312 443 270 6 224 658 135 564 3.85e-82 278
MS.gene96441.t1 AT2G32250 34.312 443 270 6 224 658 176 605 4.01e-82 278
MS.gene96441.t1 AT2G32250 34.312 443 270 6 224 658 135 564 4.21e-82 278
MS.gene96441.t1 AT2G32250 34.312 443 270 6 224 658 176 605 7.14e-82 279
MS.gene96441.t1 AT2G32250 34.312 443 270 6 224 658 176 605 7.14e-82 279
MS.gene96441.t1 AT2G32250 34.312 443 270 6 224 658 176 605 8.28e-82 278
MS.gene96441.t1 AT2G32250 34.312 443 270 6 224 658 176 605 8.28e-82 278
MS.gene96441.t1 AT2G32250 34.312 443 270 6 224 658 176 605 8.28e-82 278
MS.gene96441.t1 AT4G19990 30.198 606 353 12 51 632 24 583 3.44e-79 270
MS.gene96441.t1 AT4G19990 30.198 606 353 12 51 632 24 583 3.51e-79 270
MS.gene96441.t1 AT4G19990 30.198 606 353 12 51 632 24 583 3.51e-79 270
MS.gene96441.t1 AT4G19990 30.198 606 353 12 51 632 24 583 5.57e-79 270
MS.gene96441.t1 AT4G19990 30.198 606 353 12 51 632 24 583 5.57e-79 270
MS.gene96441.t1 AT4G19990 30.198 606 353 12 51 632 38 597 7.29e-79 270
MS.gene96441.t1 AT4G38170 34.021 388 245 4 221 606 21 399 3.09e-76 257
MS.gene96441.t1 AT4G19990 30.983 539 318 10 104 632 32 526 2.68e-75 258
MS.gene96441.t1 AT1G10240 26.433 628 413 17 1 603 1 604 5.20e-63 224
MS.gene96441.t1 AT1G10240 26.433 628 413 17 1 603 1 604 5.20e-63 224
MS.gene96441.t1 AT5G28530 27.946 594 364 13 46 603 53 618 1.54e-61 220
MS.gene96441.t1 AT5G28530 27.441 594 363 12 46 603 53 614 8.12e-61 218
MS.gene96441.t1 AT5G28530 27.441 594 363 12 46 603 53 614 8.12e-61 218
MS.gene96441.t1 AT5G28530 26.829 328 202 7 290 603 252 555 1.13e-27 119
MS.gene96441.t1 AT5G28530 25.915 328 201 6 290 603 252 551 6.81e-27 117

Find 156 sgRNAs with CRISPR-Local

Find 198 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGTGTTGACGTTTCGGATTC+CGG 0.204382 1.2:+22482884 MS.gene96441:CDS
TCTTTCCCGCTCTTCGAAAA+TGG 0.249066 1.2:-22484046 None:intergenic
TAAGATGACCAAGTACAAAA+AGG 0.265908 1.2:-22484548 None:intergenic
GATTGCAAACCCTTGTTTCA+TGG 0.302647 1.2:-22483011 None:intergenic
AAGACCGCAACCTAGTAAAA+TGG 0.321194 1.2:-22483692 None:intergenic
GTGTTGACGTTTCGGATTCC+GGG 0.344560 1.2:+22482885 MS.gene96441:CDS
GGCTATGCAGAATGCAATTC+AGG 0.347065 1.2:+22483816 MS.gene96441:CDS
TTGCTTTAAAGAAGGGTCTA+TGG 0.361166 1.2:+22483182 MS.gene96441:CDS
TGCGGCTCGTGTTGACGTTT+CGG 0.362249 1.2:+22482877 MS.gene96441:CDS
ATGCCATTTGCCCCGTTTGT+TGG 0.369173 1.2:+22483649 MS.gene96441:CDS
ACTAAATCACGGTTGTTTGC+TGG 0.375082 1.2:+22483250 MS.gene96441:CDS
AGTATTGTGTTGATTTCAAC+GGG 0.389824 1.2:+22484460 MS.gene96441:CDS
CACCACCTATGCCTAGTATT+AGG 0.393202 1.2:-22483847 None:intergenic
GTACACCCATGACAAGTATA+TGG 0.398379 1.2:+22484314 MS.gene96441:CDS
GGATTAAGAATTGGTTGATC+AGG 0.405554 1.2:-22484882 None:intergenic
CTAGGCATAGGTGGTGTCTA+TGG 0.405638 1.2:+22483854 MS.gene96441:CDS
CCACACATTGAAAGATTTGA+AGG 0.409966 1.2:+22484675 MS.gene96441:CDS
ACTTCGACAACCGAAACAAT+TGG 0.413255 1.2:-22485002 None:intergenic
AAAGGATGATCGATCAATAT+AGG 0.415391 1.2:-22482824 None:intergenic
ACATTACTTCCTATGTCTGA+TGG 0.423977 1.2:+22485134 MS.gene96441:CDS
CCTCTGTGTTGTTGACATTC+CGG 0.424793 1.2:-22484103 None:intergenic
GATGATTGACACCAACAAAC+GGG 0.432575 1.2:-22483660 None:intergenic
TTGGTGGTATGTTTGATTCA+TGG 0.433399 1.2:-22483108 None:intergenic
ACACCAACAAACGGGGCAAA+TGG 0.438957 1.2:-22483652 None:intergenic
GCAAACAACCGTGATTTAGT+TGG 0.439208 1.2:-22483247 None:intergenic
ATGGTTTGGGTGAAAATGAT+TGG 0.445440 1.2:+22484016 MS.gene96441:CDS
CATTACTTCCTATGTCTGAT+GGG 0.447968 1.2:+22485135 MS.gene96441:CDS
TGATGATTGACACCAACAAA+CGG 0.449717 1.2:-22483661 None:intergenic
CCATCAGCTAGCTCTCCGTC+AGG 0.451558 1.2:-22482854 None:intergenic
ACACAATACTTAGTTTCGTT+CGG 0.457073 1.2:-22484447 None:intergenic
GGCTAAGGTGTATGTCTTCG+AGG 0.457503 1.2:+22483761 MS.gene96441:CDS
TATCCTACTTTGCTAGAATG+AGG 0.459924 1.2:+22483473 MS.gene96441:CDS
AAAACTAGAAACTCTAAGAA+AGG 0.460138 1.2:+22483034 MS.gene96441:CDS
AAACTAGAAACTCTAAGAAA+GGG 0.460938 1.2:+22483035 MS.gene96441:CDS
ACTCCAAGACAAGGCTGAAA+AGG 0.462412 1.2:+22484209 MS.gene96441:CDS
CAAATGGTCTACCAAGAAGT+TGG 0.463702 1.2:+22484779 MS.gene96441:CDS
AGGTTGTGTTTCCTAATACT+AGG 0.465284 1.2:+22483836 MS.gene96441:CDS
GCAAAAGAAAGACACCTTCT+CGG 0.472868 1.2:+22483424 MS.gene96441:CDS
GATAACGGTTGCTTTAAAGA+AGG 0.473052 1.2:+22483174 MS.gene96441:CDS
AACATCACCAAAGTATTCAT+AGG 0.473828 1.2:-22483587 None:intergenic
TTGTGTGTATGATTCTTTGC+GGG 0.475077 1.2:+22483951 MS.gene96441:CDS
TTTGTTGGTGTCAATCATCA+TGG 0.475674 1.2:+22483664 MS.gene96441:CDS
GCCACATTGTGGTGTGGGAG+GGG 0.479684 1.2:+22484818 MS.gene96441:CDS
GAGCAATCAAGTTTCTTCGT+TGG 0.480101 1.2:-22483145 None:intergenic
CACTTATGCTCGATGGCTGA+TGG 0.482201 1.2:+22482797 None:intergenic
TCGGGAAGGAAGGAGATGGC+AGG 0.482875 1.2:+22483443 MS.gene96441:CDS
ATTTGTTGTTTCAAAGGTCC+CGG 0.485747 1.2:-22482903 None:intergenic
CCTTCAAATCTTTCAATGTG+TGG 0.491616 1.2:-22484675 None:intergenic
GACAGCATTTGTTGTTTCAA+AGG 0.491833 1.2:-22482909 None:intergenic
CTTGTTTCATGGCATATTCA+CGG 0.492232 1.2:-22483000 None:intergenic
AAAACCACTAGTTGACTGTT+GGG 0.492621 1.2:-22485195 None:intergenic
TCCGTTAAAAGTACCACGTA+AGG 0.492742 1.2:+22484902 MS.gene96441:CDS
GACAATACTCTCCTCTAAAA+CGG 0.498094 1.2:-22484415 None:intergenic
CGTGAATATGCCATGAAACA+AGG 0.498225 1.2:+22483001 MS.gene96441:CDS
TGTATGAAGAAATGATCAAA+TGG 0.501577 1.2:+22484763 MS.gene96441:CDS
TTAAAAGACATACCGATAGT+AGG 0.501742 1.2:-22482950 None:intergenic
AAATGGTCTACCAAGAAGTT+GGG 0.502052 1.2:+22484780 MS.gene96441:CDS
TTTCGAAGAGCGGGAAAGAT+GGG 0.502201 1.2:+22484050 MS.gene96441:CDS
GTTGGATTCGTCTTCAAAGT+TGG 0.502236 1.2:-22483127 None:intergenic
ATACTTGTCATGGGTGTACT+CGG 0.502362 1.2:-22484310 None:intergenic
CATCTCCTTCCTTCCCGAGA+AGG 0.502837 1.2:-22483438 None:intergenic
TTACCTGGTTGTTCGAAACA+TGG 0.503284 1.2:+22483740 MS.gene96441:CDS
TGGTCATCTTAGAGTGAAAG+AGG 0.503540 1.2:+22484560 MS.gene96441:CDS
TATGTCTTCGAGGCCTCCAA+TGG 0.508338 1.2:+22483771 MS.gene96441:CDS
TCGGTTACAATTCCCATTGG+AGG 0.511504 1.2:-22483784 None:intergenic
TCTGATGGGTTTCAAGCGTC+CGG 0.512219 1.2:+22485149 MS.gene96441:CDS
TTACGAAAATCTAACATTTG+TGG 0.512305 1.2:+22483378 MS.gene96441:CDS
AAACGATCAGGCAGGTGTAC+GGG 0.512319 1.2:+22483315 MS.gene96441:CDS
CGTTCCATGGTATGTGATGC+CGG 0.512631 1.2:+22483352 MS.gene96441:CDS
GAGAGATGTCAGAAACTTTG+TGG 0.514693 1.2:+22483402 MS.gene96441:CDS
TCTGGGCTGATGCACGTAGT+AGG 0.516810 1.2:+22483560 MS.gene96441:CDS
CAAAAGAAAGACACCTTCTC+GGG 0.517286 1.2:+22483425 MS.gene96441:CDS
GTATCTCCATATACTTGTCA+TGG 0.517305 1.2:-22484320 None:intergenic
ATAACGGTTGCTTTAAAGAA+GGG 0.522275 1.2:+22483175 MS.gene96441:CDS
TTCCCTCATTCTAGCAAAGT+AGG 0.524536 1.2:-22483476 None:intergenic
GAACAAAAGTTTCCGTTCCA+TGG 0.529264 1.2:+22483339 MS.gene96441:CDS
GGATTCGTCTTCAAAGTTGG+TGG 0.530111 1.2:-22483124 None:intergenic
TAAACGATCAGGCAGGTGTA+CGG 0.533293 1.2:+22483314 MS.gene96441:CDS
AAGTATTGTGTTGATTTCAA+CGG 0.536214 1.2:+22484459 MS.gene96441:CDS
TAAAACCACTAGTTGACTGT+TGG 0.536849 1.2:-22485196 None:intergenic
ATTGTTGAATTTGACCCGCA+TGG 0.537156 1.2:-22484270 None:intergenic
ATCCTACTTTGCTAGAATGA+GGG 0.537508 1.2:+22483474 MS.gene96441:CDS
TGATCGGTTACAATTCCCAT+TGG 0.541217 1.2:-22483787 None:intergenic
CATCAGCTAGCTCTCCGTCA+GGG 0.541329 1.2:-22482853 None:intergenic
CTGCATAGCCTTGCACTGAT+CGG 0.542185 1.2:-22483803 None:intergenic
CTATGAGATTGACATGGACG+AGG 0.547341 1.2:+22483516 MS.gene96441:CDS
TGTTTGTTGTTTGAGTTCAG+AGG 0.550114 1.2:+22484507 MS.gene96441:CDS
TGATTGCTCAGCTAAGATAA+CGG 0.550952 1.2:+22483159 MS.gene96441:CDS
GATAAATTCACGCCTACTAT+CGG 0.551302 1.2:+22482938 MS.gene96441:CDS
TATCTCCATATACTTGTCAT+GGG 0.551454 1.2:-22484319 None:intergenic
ATTCTAACTTGTGCAAGAGA+AGG 0.552020 1.2:+22483082 MS.gene96441:CDS
AGGTCTGCCTATGAATACTT+TGG 0.552277 1.2:+22483580 MS.gene96441:CDS
AGACACCTTCTCGGGAAGGA+AGG 0.553011 1.2:+22483433 MS.gene96441:CDS
CAGCCACATTGTGGTGTGGG+AGG 0.557227 1.2:+22484816 MS.gene96441:CDS
TTACAGCCACATTGTGGTGT+GGG 0.557892 1.2:+22484813 MS.gene96441:CDS
TGTTTCGAACAACCAGGTAA+AGG 0.558836 1.2:-22483737 None:intergenic
AACTCTAAGAAAGGGGCCGA+TGG 0.560180 1.2:+22483043 MS.gene96441:CDS
AGCCACATTGTGGTGTGGGA+GGG 0.562336 1.2:+22484817 MS.gene96441:CDS
CTAAATTTATCTTGCCACGA+TGG 0.563368 1.2:+22484589 MS.gene96441:CDS
GAGATACAAGTAGAATTTCG+TGG 0.566723 1.2:+22484336 MS.gene96441:CDS
GAACAACCAGGTAAAGGACT+TGG 0.570795 1.2:-22483731 None:intergenic
ATGTCTTCGAGGCCTCCAAT+GGG 0.571048 1.2:+22483772 MS.gene96441:CDS
TGTTTCCTAATACTAGGCAT+AGG 0.571109 1.2:+22483842 MS.gene96441:CDS
TTGTTGGTGTCAATCATCAT+GGG 0.576932 1.2:+22483665 MS.gene96441:CDS
TCTCGAAGGTGTGACTACAT+TGG 0.577648 1.2:+22484374 MS.gene96441:CDS
ATCAGCTAGCTCTCCGTCAG+GGG 0.582853 1.2:-22482852 None:intergenic
TCAGACATAGGAAGTAATGT+AGG 0.589454 1.2:-22485131 None:intergenic
CATTTCTTCATACAAATCAG+AGG 0.596809 1.2:-22484754 None:intergenic
GCTTGAAACCCATCAGACAT+AGG 0.602294 1.2:-22485143 None:intergenic
GTGAATATGCCATGAAACAA+GGG 0.602322 1.2:+22483002 MS.gene96441:CDS
AAGATACCAAGTCCTTTACC+TGG 0.605756 1.2:+22483725 MS.gene96441:CDS
GAAGTAGTTAAGCGTATCAC+CGG 0.605920 1.2:-22485168 None:intergenic
CGACAACGCACTCCAAGACA+AGG 0.606607 1.2:+22484200 MS.gene96441:CDS
AGATACAAGTAGAATTTCGT+GGG 0.607840 1.2:+22484337 MS.gene96441:CDS
AGAAAGACACCTTCTCGGGA+AGG 0.609091 1.2:+22483429 MS.gene96441:CDS
GACAACCGACGATTAGTTCG+AGG 0.611005 1.2:-22484930 None:intergenic
TGCATCAATGAGCAAAGATG+TGG 0.611914 1.2:+22485229 MS.gene96441:CDS
ACCACCGGCATCACATACCA+TGG 0.613048 1.2:-22483356 None:intergenic
AAATGCAACTGTTATCTCGA+AGG 0.615193 1.2:+22484360 MS.gene96441:CDS
TTCCTAATACTAGGCATAGG+TGG 0.615209 1.2:+22483845 MS.gene96441:CDS
CAAGCACAATCATTCCATGC+GGG 0.616971 1.2:+22484256 MS.gene96441:CDS
GGTTGTTCGAAACATGGCTA+AGG 0.617470 1.2:+22483746 MS.gene96441:CDS
CGTGGCAAGATAAATTTAGA+CGG 0.619992 1.2:-22484585 None:intergenic
AATTGTAACCGATCAGTGCA+AGG 0.620761 1.2:+22483795 MS.gene96441:CDS
CGGGAAGGAAGGAGATGGCA+GGG 0.622349 1.2:+22483444 MS.gene96441:CDS
TCATCCCAACAGTCAACTAG+TGG 0.623204 1.2:+22485191 MS.gene96441:CDS
CCTGACGGAGAGCTAGCTGA+TGG 0.623440 1.2:+22482854 MS.gene96441:CDS
CCGTTAAAAGTACCACGTAA+GGG 0.624486 1.2:+22484903 MS.gene96441:CDS
CGGCATCACATACCATGGAA+CGG 0.625469 1.2:-22483351 None:intergenic
ATTGTGTGTATGATTCTTTG+CGG 0.625780 1.2:+22483950 MS.gene96441:CDS
TAGCCATGTTTCGAACAACC+AGG 0.627145 1.2:-22483743 None:intergenic
GTTCGAGGACGTCCCTTACG+TGG 0.628497 1.2:-22484915 None:intergenic
CTTCTCGGGAAGGAAGGAGA+TGG 0.631777 1.2:+22483439 MS.gene96441:CDS
TTTACAGCCACATTGTGGTG+TGG 0.632168 1.2:+22484812 MS.gene96441:CDS
AACTAGAAACTCTAAGAAAG+GGG 0.633083 1.2:+22483036 MS.gene96441:CDS
ATGAGTTTACAGCCACATTG+TGG 0.634509 1.2:+22484807 MS.gene96441:CDS
AAAGGATACGCACAATACAA+AGG 0.637659 1.2:+22483907 MS.gene96441:CDS
CAAGGCTGAAAAGGAATACG+AGG 0.638254 1.2:+22484218 MS.gene96441:CDS
GGATGATCGATCAATATAGG+AGG 0.639611 1.2:-22482821 None:intergenic
TACAAATCAGAGGTTTGACT+AGG 0.642589 1.2:-22484744 None:intergenic
AGATAAGTCCAACTAAATCA+CGG 0.645312 1.2:+22483239 MS.gene96441:CDS
TCAGCTAGCTCTCCGTCAGG+GGG 0.662037 1.2:-22482851 None:intergenic
TTATGAAATTGCAGAATGTG+CGG 0.662542 1.2:+22484713 MS.gene96441:CDS
CGGAGAGCTAGCTGATGGTG+CGG 0.662675 1.2:+22482859 MS.gene96441:CDS
ATGATTGACACCAACAAACG+GGG 0.665562 1.2:-22483659 None:intergenic
TTAGAGGAGAGTATTGTCTG+TGG 0.669312 1.2:+22484420 MS.gene96441:CDS
GGATCATAGCTTAAACACGA+TGG 0.674970 1.2:+22484839 MS.gene96441:CDS
GACGTCCTCGAACTAATCGT+CGG 0.680634 1.2:+22484925 MS.gene96441:CDS
TCATAGCTTAAACACGATGG+AGG 0.690849 1.2:+22484842 MS.gene96441:CDS
ATACTTGTTTGTCAAGTACG+TGG 0.696002 1.2:-22483623 None:intergenic
TCAAGCACAATCATTCCATG+CGG 0.697666 1.2:+22484255 MS.gene96441:CDS
TCCCCTCCCACACCACAATG+TGG 0.710147 1.2:-22484819 None:intergenic
TCCATGGTATGTGATGCCGG+TGG 0.764195 1.2:+22483355 MS.gene96441:CDS
CCGGAATGTCAACAACACAG+AGG 0.797075 1.2:+22484103 MS.gene96441:CDS
AGATTGATATGCATGCACAG+CGG 0.798983 1.2:+22483281 MS.gene96441:CDS
GTATTGTGTTGATTTCAACG+GGG 0.841514 1.2:+22484461 MS.gene96441:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATTTAAAAAATGATTTCT+GGG + chr1.2:22484080-22484099 MS.gene96441:CDS 10.0%
!!! AAATCATTTTTTAAATAACA+TGG - chr1.2:22484078-22484097 None:intergenic 10.0%
!! AATGTAATCACAATAATAAT+AGG - chr1.2:22485041-22485060 None:intergenic 15.0%
!! GTTATTTAAAAAATGATTTC+TGG + chr1.2:22484079-22484098 MS.gene96441:CDS 15.0%
!! AAGAAAAAAACCAATTGTTT+CGG + chr1.2:22484992-22485011 MS.gene96441:CDS 20.0%
!! ACAACATTCATTGAAAAATA+TGG + chr1.2:22483997-22484016 MS.gene96441:CDS 20.0%
!! ATTCATTGAAAAATATGGTT+TGG + chr1.2:22484002-22484021 MS.gene96441:CDS 20.0%
!! TTCATTGAAAAATATGGTTT+GGG + chr1.2:22484003-22484022 MS.gene96441:CDS 20.0%
! AAAATTGCCGAAAAATTGAA+AGG + chr1.2:22483889-22483908 MS.gene96441:CDS 25.0%
! TGTATGAAGAAATGATCAAA+TGG + chr1.2:22484763-22484782 MS.gene96441:CDS 25.0%
! TTACGAAAATCTAACATTTG+TGG + chr1.2:22483378-22483397 MS.gene96441:CDS 25.0%
!! AAAACTAGAAACTCTAAGAA+AGG + chr1.2:22483034-22483053 MS.gene96441:CDS 25.0%
!! AAACTAGAAACTCTAAGAAA+GGG + chr1.2:22483035-22483054 MS.gene96441:CDS 25.0%
!! TATCGGTATGTCTTTTAAAT+CGG + chr1.2:22482955-22482974 MS.gene96441:CDS 25.0%
!!! AAGTATTGTGTTGATTTCAA+CGG + chr1.2:22484459-22484478 MS.gene96441:CDS 25.0%
!!! ACTTTTAACGGATTAAGAAT+TGG - chr1.2:22484894-22484913 None:intergenic 25.0%
!!! GAAATATTTTAACATGCCAT+CGG - chr1.2:22483062-22483081 None:intergenic 25.0%
!!! TTTTTTCACAATCTTTTCAG+TGG - chr1.2:22484958-22484977 None:intergenic 25.0%
AAAGGATGATCGATCAATAT+AGG - chr1.2:22482827-22482846 None:intergenic 30.0%
AAGATGACCAAGTACAAAAA+GGG - chr1.2:22484550-22484569 None:intergenic 30.0%
ACACAATACTTAGTTTCGTT+CGG - chr1.2:22484450-22484469 None:intergenic 30.0%
AGATAAGTCCAACTAAATCA+CGG + chr1.2:22483239-22483258 MS.gene96441:CDS 30.0%
AGATACAAGTAGAATTTCGT+GGG + chr1.2:22484337-22484356 MS.gene96441:CDS 30.0%
ATTGTGTGTATGATTCTTTG+CGG + chr1.2:22483950-22483969 MS.gene96441:CDS 30.0%
CATTTCTTCATACAAATCAG+AGG - chr1.2:22484757-22484776 None:intergenic 30.0%
TAAGATGACCAAGTACAAAA+AGG - chr1.2:22484551-22484570 None:intergenic 30.0%
TATCTCCATATACTTGTCAT+GGG - chr1.2:22484322-22484341 None:intergenic 30.0%
TTAAAAGACATACCGATAGT+AGG - chr1.2:22482953-22482972 None:intergenic 30.0%
TTATGAAATTGCAGAATGTG+CGG + chr1.2:22484713-22484732 MS.gene96441:CDS 30.0%
! AACATCACCAAAGTATTCAT+AGG - chr1.2:22483590-22483609 None:intergenic 30.0%
! AACTAGAAACTCTAAGAAAG+GGG + chr1.2:22483036-22483055 MS.gene96441:CDS 30.0%
! CTTTTTCTATGAGATTGACA+TGG + chr1.2:22483510-22483529 MS.gene96441:CDS 30.0%
! TCATGTGCAGAATATTTTCT+GGG + chr1.2:22483543-22483562 MS.gene96441:CDS 30.0%
! TGCGTATCCTTTCAATTTTT+CGG - chr1.2:22483899-22483918 None:intergenic 30.0%
! TTAAAAAATGATTTCTGGGC+CGG + chr1.2:22484084-22484103 MS.gene96441:CDS 30.0%
! TTCATGTGCAGAATATTTTC+TGG + chr1.2:22483542-22483561 MS.gene96441:CDS 30.0%
!! AGTATTGTGTTGATTTCAAC+GGG + chr1.2:22484460-22484479 MS.gene96441:CDS 30.0%
!! ATAACGGTTGCTTTAAAGAA+GGG + chr1.2:22483175-22483194 MS.gene96441:CDS 30.0%
!! GACAATTTTGATAAACGATC+AGG + chr1.2:22483303-22483322 MS.gene96441:CDS 30.0%
!!! AATGTGTGGTTGTAGTTTTT+TGG - chr1.2:22484664-22484683 None:intergenic 30.0%
!!! AGTATGAATGCTTTTTTCGA+TGG + chr1.2:22484132-22484151 MS.gene96441:CDS 30.0%
AAAACCACTAGTTGACTGTT+GGG - chr1.2:22485198-22485217 None:intergenic 35.0%
AAAGGATACGCACAATACAA+AGG + chr1.2:22483907-22483926 MS.gene96441:CDS 35.0%
AAATGCAACTGTTATCTCGA+AGG + chr1.2:22484360-22484379 MS.gene96441:CDS 35.0%
AAATGGTCTACCAAGAAGTT+GGG + chr1.2:22484780-22484799 MS.gene96441:CDS 35.0%
ACATTACTTCCTATGTCTGA+TGG + chr1.2:22485134-22485153 MS.gene96441:CDS 35.0%
AGGTTGTGTTTCCTAATACT+AGG + chr1.2:22483836-22483855 MS.gene96441:CDS 35.0%
ATACTTGTTTGTCAAGTACG+TGG - chr1.2:22483626-22483645 None:intergenic 35.0%
ATCCTACTTTGCTAGAATGA+GGG + chr1.2:22483474-22483493 MS.gene96441:CDS 35.0%
CATTACTTCCTATGTCTGAT+GGG + chr1.2:22485135-22485154 MS.gene96441:CDS 35.0%
CCACACATTGAAAGATTTGA+AGG + chr1.2:22484675-22484694 MS.gene96441:CDS 35.0%
CCTTCAAATCTTTCAATGTG+TGG - chr1.2:22484678-22484697 None:intergenic 35.0%
CGTGGCAAGATAAATTTAGA+CGG - chr1.2:22484588-22484607 None:intergenic 35.0%
CTAAATTTATCTTGCCACGA+TGG + chr1.2:22484589-22484608 MS.gene96441:CDS 35.0%
CTTGTTTCATGGCATATTCA+CGG - chr1.2:22483003-22483022 None:intergenic 35.0%
GAGATACAAGTAGAATTTCG+TGG + chr1.2:22484336-22484355 MS.gene96441:CDS 35.0%
GATAAATTCACGCCTACTAT+CGG + chr1.2:22482938-22482957 MS.gene96441:CDS 35.0%
GGATTAAGAATTGGTTGATC+AGG - chr1.2:22484885-22484904 None:intergenic 35.0%
GTATCTCCATATACTTGTCA+TGG - chr1.2:22484323-22484342 None:intergenic 35.0%
GTGAATATGCCATGAAACAA+GGG + chr1.2:22483002-22483021 MS.gene96441:CDS 35.0%
TAAAACCACTAGTTGACTGT+TGG - chr1.2:22485199-22485218 None:intergenic 35.0%
TACAAATCAGAGGTTTGACT+AGG - chr1.2:22484747-22484766 None:intergenic 35.0%
TATCCTACTTTGCTAGAATG+AGG + chr1.2:22483473-22483492 MS.gene96441:CDS 35.0%
TCAGACATAGGAAGTAATGT+AGG - chr1.2:22485134-22485153 None:intergenic 35.0%
TGATGATTGACACCAACAAA+CGG - chr1.2:22483664-22483683 None:intergenic 35.0%
TGATTGCTCAGCTAAGATAA+CGG + chr1.2:22483159-22483178 MS.gene96441:CDS 35.0%
TGTTTCCTAATACTAGGCAT+AGG + chr1.2:22483842-22483861 MS.gene96441:CDS 35.0%
TTGTGTGTATGATTCTTTGC+GGG + chr1.2:22483951-22483970 MS.gene96441:CDS 35.0%
! ATCTACATACACCGTTTTAG+AGG + chr1.2:22484404-22484423 MS.gene96441:CDS 35.0%
! ATGGTTTGGGTGAAAATGAT+TGG + chr1.2:22484016-22484035 MS.gene96441:CDS 35.0%
! ATTCTAACTTGTGCAAGAGA+AGG + chr1.2:22483082-22483101 MS.gene96441:CDS 35.0%
! CAATCCATTTTACTAGGTTG+CGG + chr1.2:22483688-22483707 MS.gene96441:CDS 35.0%
! GACAATACTCTCCTCTAAAA+CGG - chr1.2:22484418-22484437 None:intergenic 35.0%
! TGAATACCATTTTCGAAGAG+CGG + chr1.2:22484040-22484059 MS.gene96441:CDS 35.0%
! TGTTAGATTTTCGTAACCAC+CGG - chr1.2:22483374-22483393 None:intergenic 35.0%
! TTCACATTTTTACTCCATCG+TGG - chr1.2:22484606-22484625 None:intergenic 35.0%
! TTGGTGGTATGTTTGATTCA+TGG - chr1.2:22483111-22483130 None:intergenic 35.0%
! TTTCACAATCTTTTCAGTGG+TGG - chr1.2:22484955-22484974 None:intergenic 35.0%
!! ATTTGTTGTTTCAAAGGTCC+CGG - chr1.2:22482906-22482925 None:intergenic 35.0%
!! ATTTTGATAAACGATCAGGC+AGG + chr1.2:22483307-22483326 MS.gene96441:CDS 35.0%
!! GACAGCATTTGTTGTTTCAA+AGG - chr1.2:22482912-22482931 None:intergenic 35.0%
!! GATAACGGTTGCTTTAAAGA+AGG + chr1.2:22483174-22483193 MS.gene96441:CDS 35.0%
!! GTATTGTGTTGATTTCAACG+GGG + chr1.2:22484461-22484480 MS.gene96441:CDS 35.0%
!! TGTTTGTTGTTTGAGTTCAG+AGG + chr1.2:22484507-22484526 MS.gene96441:CDS 35.0%
!! TTGCTTTAAAGAAGGGTCTA+TGG + chr1.2:22483182-22483201 MS.gene96441:CDS 35.0%
!! TTGTTGGTGTCAATCATCAT+GGG + chr1.2:22483665-22483684 MS.gene96441:CDS 35.0%
!! TTTGTTGGTGTCAATCATCA+TGG + chr1.2:22483664-22483683 MS.gene96441:CDS 35.0%
!!! GGGTTGATGATTTTGTTGTT+GGG + chr1.2:22483971-22483990 MS.gene96441:CDS 35.0%
!!! TTGATGATTTTGTTGTTGGG+TGG + chr1.2:22483974-22483993 MS.gene96441:CDS 35.0%
AAGACCGCAACCTAGTAAAA+TGG - chr1.2:22483695-22483714 None:intergenic 40.0%
AAGATACCAAGTCCTTTACC+TGG + chr1.2:22483725-22483744 MS.gene96441:CDS 40.0%
AATTGTAACCGATCAGTGCA+AGG + chr1.2:22483795-22483814 MS.gene96441:CDS 40.0%
ACTAAATCACGGTTGTTTGC+TGG + chr1.2:22483250-22483269 MS.gene96441:CDS 40.0%
ACTTCGACAACCGAAACAAT+TGG - chr1.2:22485005-22485024 None:intergenic 40.0%
AGATTGATATGCATGCACAG+CGG + chr1.2:22483281-22483300 MS.gene96441:CDS 40.0%
AGGTCTGCCTATGAATACTT+TGG + chr1.2:22483580-22483599 MS.gene96441:CDS 40.0%
ATACTTGTCATGGGTGTACT+CGG - chr1.2:22484313-22484332 None:intergenic 40.0%
ATGAGTTTACAGCCACATTG+TGG + chr1.2:22484807-22484826 MS.gene96441:CDS 40.0%
ATGATTGACACCAACAAACG+GGG - chr1.2:22483662-22483681 None:intergenic 40.0%
ATTGTTGAATTTGACCCGCA+TGG - chr1.2:22484273-22484292 None:intergenic 40.0%
CAAAAGAAAGACACCTTCTC+GGG + chr1.2:22483425-22483444 MS.gene96441:CDS 40.0%
CAAATGGTCTACCAAGAAGT+TGG + chr1.2:22484779-22484798 MS.gene96441:CDS 40.0%
CGTGAATATGCCATGAAACA+AGG + chr1.2:22483001-22483020 MS.gene96441:CDS 40.0%
GAACAAAAGTTTCCGTTCCA+TGG + chr1.2:22483339-22483358 MS.gene96441:CDS 40.0%
GAAGTAGTTAAGCGTATCAC+CGG - chr1.2:22485171-22485190 None:intergenic 40.0%
GAGAGATGTCAGAAACTTTG+TGG + chr1.2:22483402-22483421 MS.gene96441:CDS 40.0%
GAGCAATCAAGTTTCTTCGT+TGG - chr1.2:22483148-22483167 None:intergenic 40.0%
GATGATTGACACCAACAAAC+GGG - chr1.2:22483663-22483682 None:intergenic 40.0%
GCAAAAGAAAGACACCTTCT+CGG + chr1.2:22483424-22483443 MS.gene96441:CDS 40.0%
GCAAACAACCGTGATTTAGT+TGG - chr1.2:22483250-22483269 None:intergenic 40.0%
GGATCATAGCTTAAACACGA+TGG + chr1.2:22484839-22484858 MS.gene96441:CDS 40.0%
GGATGATCGATCAATATAGG+AGG - chr1.2:22482824-22482843 None:intergenic 40.0%
GTACACCCATGACAAGTATA+TGG + chr1.2:22484314-22484333 MS.gene96441:CDS 40.0%
GTTGGATTCGTCTTCAAAGT+TGG - chr1.2:22483130-22483149 None:intergenic 40.0%
TCAAGCACAATCATTCCATG+CGG + chr1.2:22484255-22484274 MS.gene96441:CDS 40.0%
TCATAGCTTAAACACGATGG+AGG + chr1.2:22484842-22484861 MS.gene96441:CDS 40.0%
TGATCGGTTACAATTCCCAT+TGG - chr1.2:22483790-22483809 None:intergenic 40.0%
TGCATCAATGAGCAAAGATG+TGG + chr1.2:22485229-22485248 MS.gene96441:CDS 40.0%
TGGTCATCTTAGAGTGAAAG+AGG + chr1.2:22484560-22484579 MS.gene96441:CDS 40.0%
TGTTTCGAACAACCAGGTAA+AGG - chr1.2:22483740-22483759 None:intergenic 40.0%
TTACCTGGTTGTTCGAAACA+TGG + chr1.2:22483740-22483759 MS.gene96441:CDS 40.0%
TTCCCTCATTCTAGCAAAGT+AGG - chr1.2:22483479-22483498 None:intergenic 40.0%
TTCCTAATACTAGGCATAGG+TGG + chr1.2:22483845-22483864 MS.gene96441:CDS 40.0%
TTTCGGTTGTCGAAGTAAGT+TGG + chr1.2:22485009-22485028 MS.gene96441:intron 40.0%
! ACTCATTTTGCCCAACTTCT+TGG - chr1.2:22484793-22484812 None:intergenic 40.0%
! AGACATGCCCTTTTTGTACT+TGG + chr1.2:22484540-22484559 MS.gene96441:CDS 40.0%
! AGGAATACGAGGCAGATTTT+CGG + chr1.2:22484229-22484248 MS.gene96441:CDS 40.0%
! CATGGGCAATCCATTTTACT+AGG + chr1.2:22483682-22483701 MS.gene96441:CDS 40.0%
! CCCTTACGTGGTACTTTTAA+CGG - chr1.2:22484906-22484925 None:intergenic 40.0%
! GAATACCATTTTCGAAGAGC+GGG + chr1.2:22484041-22484060 MS.gene96441:CDS 40.0%
! GATTGCAAACCCTTGTTTCA+TGG - chr1.2:22483014-22483033 None:intergenic 40.0%
!! ATTCCTTTTCAGCCTTGTCT+TGG - chr1.2:22484215-22484234 None:intergenic 40.0%
!! CCGTTAAAAGTACCACGTAA+GGG + chr1.2:22484903-22484922 MS.gene96441:CDS 40.0%
!! TCCGTTAAAAGTACCACGTA+AGG + chr1.2:22484902-22484921 MS.gene96441:CDS 40.0%
!! TTAGAGGAGAGTATTGTCTG+TGG + chr1.2:22484420-22484439 MS.gene96441:CDS 40.0%
!!! CGGGTTGATGATTTTGTTGT+TGG + chr1.2:22483970-22483989 MS.gene96441:CDS 40.0%
ACTCCAAGACAAGGCTGAAA+AGG + chr1.2:22484209-22484228 MS.gene96441:CDS 45.0%
CAAGCACAATCATTCCATGC+GGG + chr1.2:22484256-22484275 MS.gene96441:CDS 45.0%
CAAGGCTGAAAAGGAATACG+AGG + chr1.2:22484218-22484237 MS.gene96441:CDS 45.0%
CACCACCTATGCCTAGTATT+AGG - chr1.2:22483850-22483869 None:intergenic 45.0%
CATCCTTTATTACCCCCTGA+CGG + chr1.2:22482839-22482858 MS.gene96441:CDS 45.0%
CTATGAGATTGACATGGACG+AGG + chr1.2:22483516-22483535 MS.gene96441:CDS 45.0%
GAACAACCAGGTAAAGGACT+TGG - chr1.2:22483734-22483753 None:intergenic 45.0%
GCTTGAAACCCATCAGACAT+AGG - chr1.2:22485146-22485165 None:intergenic 45.0%
GGATTCGTCTTCAAAGTTGG+TGG - chr1.2:22483127-22483146 None:intergenic 45.0%
GGCTATGCAGAATGCAATTC+AGG + chr1.2:22483816-22483835 MS.gene96441:CDS 45.0%
GGTTGTTCGAAACATGGCTA+AGG + chr1.2:22483746-22483765 MS.gene96441:CDS 45.0%
TAAACGATCAGGCAGGTGTA+CGG + chr1.2:22483314-22483333 MS.gene96441:CDS 45.0%
TAGCCATGTTTCGAACAACC+AGG - chr1.2:22483746-22483765 None:intergenic 45.0%
TCATCCCAACAGTCAACTAG+TGG + chr1.2:22485191-22485210 MS.gene96441:CDS 45.0%
TCGGTTACAATTCCCATTGG+AGG - chr1.2:22483787-22483806 None:intergenic 45.0%
TCTTTCCCGCTCTTCGAAAA+TGG - chr1.2:22484049-22484068 None:intergenic 45.0%
TTACAGCCACATTGTGGTGT+GGG + chr1.2:22484813-22484832 MS.gene96441:CDS 45.0%
TTTACAGCCACATTGTGGTG+TGG + chr1.2:22484812-22484831 MS.gene96441:CDS 45.0%
TTTCGAAGAGCGGGAAAGAT+GGG + chr1.2:22484050-22484069 MS.gene96441:CDS 45.0%
! CCTCTGTGTTGTTGACATTC+CGG - chr1.2:22484106-22484125 None:intergenic 45.0%
! TCTCGAAGGTGTGACTACAT+TGG + chr1.2:22484374-22484393 MS.gene96441:CDS 45.0%
! TTTTCGAAGAGCGGGAAAGA+TGG + chr1.2:22484049-22484068 MS.gene96441:CDS 45.0%
AAACGATCAGGCAGGTGTAC+GGG + chr1.2:22483315-22483334 MS.gene96441:CDS 50.0%
ACACCAACAAACGGGGCAAA+TGG - chr1.2:22483655-22483674 None:intergenic 50.0%
AGAAAGACACCTTCTCGGGA+AGG + chr1.2:22483429-22483448 MS.gene96441:CDS 50.0%
ATGTCTTCGAGGCCTCCAAT+GGG + chr1.2:22483772-22483791 MS.gene96441:CDS 50.0%
CCGGAATGTCAACAACACAG+AGG + chr1.2:22484103-22484122 MS.gene96441:CDS 50.0%
CGGCATCACATACCATGGAA+CGG - chr1.2:22483354-22483373 None:intergenic 50.0%
CGTTCCATGGTATGTGATGC+CGG + chr1.2:22483352-22483371 MS.gene96441:CDS 50.0%
CTAGGCATAGGTGGTGTCTA+TGG + chr1.2:22483854-22483873 MS.gene96441:CDS 50.0%
GACGTCCTCGAACTAATCGT+CGG + chr1.2:22484925-22484944 MS.gene96441:CDS 50.0%
GGCTAAGGTGTATGTCTTCG+AGG + chr1.2:22483761-22483780 MS.gene96441:CDS 50.0%
TATGTCTTCGAGGCCTCCAA+TGG + chr1.2:22483771-22483790 MS.gene96441:CDS 50.0%
TCTCCGTCAGGGGGTAATAA+AGG - chr1.2:22482845-22482864 None:intergenic 50.0%
! AACTCTAAGAAAGGGGCCGA+TGG + chr1.2:22483043-22483062 MS.gene96441:CDS 50.0%
! ATGCCATTTGCCCCGTTTGT+TGG + chr1.2:22483649-22483668 MS.gene96441:CDS 50.0%
! CGTGTTGACGTTTCGGATTC+CGG + chr1.2:22482884-22482903 MS.gene96441:CDS 50.0%
! CTGCATAGCCTTGCACTGAT+CGG - chr1.2:22483806-22483825 None:intergenic 50.0%
! GACAACCGACGATTAGTTCG+AGG - chr1.2:22484933-22484952 None:intergenic 50.0%
! GTGTTGACGTTTCGGATTCC+GGG + chr1.2:22482885-22482904 MS.gene96441:CDS 50.0%
!! TCTGATGGGTTTCAAGCGTC+CGG + chr1.2:22485149-22485168 MS.gene96441:CDS 50.0%
ACCACCGGCATCACATACCA+TGG - chr1.2:22483359-22483378 None:intergenic 55.0%
AGACACCTTCTCGGGAAGGA+AGG + chr1.2:22483433-22483452 MS.gene96441:CDS 55.0%
AGCCACATTGTGGTGTGGGA+GGG + chr1.2:22484817-22484836 MS.gene96441:CDS 55.0%
CATCTCCTTCCTTCCCGAGA+AGG - chr1.2:22483441-22483460 None:intergenic 55.0%
CGACAACGCACTCCAAGACA+AGG + chr1.2:22484200-22484219 MS.gene96441:CDS 55.0%
CTTCTCGGGAAGGAAGGAGA+TGG + chr1.2:22483439-22483458 MS.gene96441:CDS 55.0%
TCCATGGTATGTGATGCCGG+TGG + chr1.2:22483355-22483374 MS.gene96441:CDS 55.0%
TCTGGGCTGATGCACGTAGT+AGG + chr1.2:22483560-22483579 MS.gene96441:CDS 55.0%
! ATCAGCTAGCTCTCCGTCAG+GGG - chr1.2:22482855-22482874 None:intergenic 55.0%
! CATCAGCTAGCTCTCCGTCA+GGG - chr1.2:22482856-22482875 None:intergenic 55.0%
! TGCGGCTCGTGTTGACGTTT+CGG + chr1.2:22482877-22482896 MS.gene96441:CDS 55.0%
CAGCCACATTGTGGTGTGGG+AGG + chr1.2:22484816-22484835 MS.gene96441:CDS 60.0%
CCTGACGGAGAGCTAGCTGA+TGG + chr1.2:22482854-22482873 MS.gene96441:CDS 60.0%
CGGGAAGGAAGGAGATGGCA+GGG + chr1.2:22483444-22483463 MS.gene96441:CDS 60.0%
GCCACATTGTGGTGTGGGAG+GGG + chr1.2:22484818-22484837 MS.gene96441:CDS 60.0%
GTTCGAGGACGTCCCTTACG+TGG - chr1.2:22484918-22484937 None:intergenic 60.0%
TCCCCTCCCACACCACAATG+TGG - chr1.2:22484822-22484841 None:intergenic 60.0%
TCGGGAAGGAAGGAGATGGC+AGG + chr1.2:22483443-22483462 MS.gene96441:CDS 60.0%
! CCATCAGCTAGCTCTCCGTC+AGG - chr1.2:22482857-22482876 None:intergenic 60.0%
! CGGAGAGCTAGCTGATGGTG+CGG + chr1.2:22482859-22482878 MS.gene96441:CDS 60.0%
! TCAGCTAGCTCTCCGTCAGG+GGG - chr1.2:22482854-22482873 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 22482809 22485268 22482809 ID=MS.gene96441
chr1.2 mRNA 22482809 22485268 22482809 ID=MS.gene96441.t1;Parent=MS.gene96441
chr1.2 exon 22482809 22485022 22482809 ID=MS.gene96441.t1.exon1;Parent=MS.gene96441.t1
chr1.2 CDS 22482809 22485022 22482809 ID=cds.MS.gene96441.t1;Parent=MS.gene96441.t1
chr1.2 exon 22485131 22485268 22485131 ID=MS.gene96441.t1.exon2;Parent=MS.gene96441.t1
chr1.2 CDS 22485131 22485268 22485131 ID=cds.MS.gene96441.t1;Parent=MS.gene96441.t1
Gene Sequence

>MS.gene96441

ATGGCTGATGGTCCTCCTATATTGATCGATCATCCTTTATTACCCCCTGACGGAGAGCTAGCTGATGGTGCGGCTCGTGTTGACGTTTCGGATTCCGGGACCTTTGAAACAACAAATGCTGTCGCAACAGATAAATTCACGCCTACTATCGGTATGTCTTTTAAATCGGTTGTAGATTGTAAGTCTTTTTACCGTGAATATGCCATGAAACAAGGGTTTGCAATCAAAACTAGAAACTCTAAGAAAGGGGCCGATGGCATGTTAAAATATTTCATTCTAACTTGTGCAAGAGAAGGTCACCATGAATCAAACATACCACCAACTTTGAAGACGAATCCAACGAAGAAACTTGATTGCTCAGCTAAGATAACGGTTGCTTTAAAGAAGGGTCTATGGACTATTTTGTCTTTTAATTCATGTCATAATCATGAGATAAGTCCAACTAAATCACGGTTGTTTGCTGGCAATAAGAAGATTGATATGCATGCACAGCGGACAATTTTGATAAACGATCAGGCAGGTGTACGGGTGAACAAAAGTTTCCGTTCCATGGTATGTGATGCCGGTGGTTACGAAAATCTAACATTTGTGGAGAGAGATGTCAGAAACTTTGTGGCAAAAGAAAGACACCTTCTCGGGAAGGAAGGAGATGGCAGGGCACTTTTATCCTACTTTGCTAGAATGAGGGAATGCAACAAAGACTTTTTCTATGAGATTGACATGGACGAGGACTTTCATGTGCAGAATATTTTCTGGGCTGATGCACGTAGTAGGTCTGCCTATGAATACTTTGGTGATGTTGTCACATTCGATACCACGTACTTGACAAACAAGTATGACATGCCATTTGCCCCGTTTGTTGGTGTCAATCATCATGGGCAATCCATTTTACTAGGTTGCGGTCTTTTATCATCTGAAGATACCAAGTCCTTTACCTGGTTGTTCGAAACATGGCTAAGGTGTATGTCTTCGAGGCCTCCAATGGGAATTGTAACCGATCAGTGCAAGGCTATGCAGAATGCAATTCAGGTTGTGTTTCCTAATACTAGGCATAGGTGGTGTCTATGGCATATAATGAGAAAAATTGCCGAAAAATTGAAAGGATACGCACAATACAAAGGAATAAAAAATGATATGAAAAATTGTGTGTATGATTCTTTGCGGGTTGATGATTTTGTTGTTGGGTGGACAACATTCATTGAAAAATATGGTTTGGGTGAAAATGATTGGTTGAATACCATTTTCGAAGAGCGGGAAAGATGGGTGCCATGTTATTTAAAAAATGATTTCTGGGCCGGAATGTCAACAACACAGAGGAGTGAAAGTATGAATGCTTTTTTCGATGGTTACATTAATGCAAGAACTTCTCTAAGCGAATTTGTAAAGCAATACGACAACGCACTCCAAGACAAGGCTGAAAAGGAATACGAGGCAGATTTTCGGTCTTCAAGCACAATCATTCCATGCGGGTCAAATTCAACAATCGAGAGACAATTTCAAGCCGAGTACACCCATGACAAGTATATGGAGATACAAGTAGAATTTCGTGGGAAATGCAACTGTTATCTCGAAGGTGTGACTACATTGGAATTTACATCTACATACACCGTTTTAGAGGAGAGTATTGTCTGTGGTAAACCGAACGAAACTAAGTATTGTGTTGATTTCAACGGGGAAGACAATAATGTTACGTGCACTTGTTTGTTGTTTGAGTTCAGAGGCATTTTGTGTAGACATGCCCTTTTTGTACTTGGTCATCTTAGAGTGAAAGAGGTTCCGTCTAAATTTATCTTGCCACGATGGAGTAAAAATGTGAAGAGAAAATATGCACACATGAAGACAAGTTACAATGCCAAAAAACTACAACCACACATTGAAAGATTTGAAGGTCTTTGCAAGACATTTTATGAAATTGCAGAATGTGCGGCTGAGACACCTAGTCAAACCTCTGATTTGTATGAAGAAATGATCAAATGGTCTACCAAGAAGTTGGGCAAAATGAGTTTACAGCCACATTGTGGTGTGGGAGGGGATCATAGCTTAAACACGATGGAGGACTCATTATCAATGCAACCTGATCAACCAATTCTTAATCCGTTAAAAGTACCACGTAAGGGACGTCCTCGAACTAATCGTCGGTTGTCCACCACTGAAAAGATTGTGAAAAAAAGAAGCAAAATGCAAAGAAAAAAACCAATTGTTTCGGTTGTCGAAGTAAGTTGGTGTTAACCTATTATTATTGTGATTACATTTGTTTTTTTAATAATAATACAATGTTAATTATGTTAAATGTAATTAATATTTCACTCTGTAATACTACAGCCTACATTACTTCCTATGTCTGATGGGTTTCAAGCGTCCGGTGATACGCTTAACTACTTCTCATCCCAACAGTCAACTAGTGGTTTTATGTCATTACTTGCATCAATGAGCAAAGATGTGGACGCAGCTGAATTTTAA
Protein sequence

>MS.gene96441.t1

MADGPPILIDHPLLPPDGELADGAARVDVSDSGTFETTNAVATDKFTPTIGMSFKSVVDCKSFYREYAMKQGFAIKTRNSKKGADGMLKYFILTCAREGHHESNIPPTLKTNPTKKLDCSAKITVALKKGLWTILSFNSCHNHEISPTKSRLFAGNKKIDMHAQRTILINDQAGVRVNKSFRSMVCDAGGYENLTFVERDVRNFVAKERHLLGKEGDGRALLSYFARMRECNKDFFYEIDMDEDFHVQNIFWADARSRSAYEYFGDVVTFDTTYLTNKYDMPFAPFVGVNHHGQSILLGCGLLSSEDTKSFTWLFETWLRCMSSRPPMGIVTDQCKAMQNAIQVVFPNTRHRWCLWHIMRKIAEKLKGYAQYKGIKNDMKNCVYDSLRVDDFVVGWTTFIEKYGLGENDWLNTIFEERERWVPCYLKNDFWAGMSTTQRSESMNAFFDGYINARTSLSEFVKQYDNALQDKAEKEYEADFRSSSTIIPCGSNSTIERQFQAEYTHDKYMEIQVEFRGKCNCYLEGVTTLEFTSTYTVLEESIVCGKPNETKYCVDFNGEDNNVTCTCLLFEFRGILCRHALFVLGHLRVKEVPSKFILPRWSKNVKRKYAHMKTSYNAKKLQPHIERFEGLCKTFYEIAECAAETPSQTSDLYEEMIKWSTKKLGKMSLQPHCGVGGDHSLNTMEDSLSMQPDQPILNPLKVPRKGRPRTNRRLSTTEKIVKKRSKMQRKKPIVSVVEPTLLPMSDGFQASGDTLNYFSSQQSTSGFMSLLASMSKDVDAAEF