AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene96525

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene96525.t1 MTR_5g054900 96.121 464 12 2 1 462 1 460 0.0 921
MS.gene96525.t1 MTR_5g054900 96.544 434 13 1 31 462 1 434 0.0 870
MS.gene96525.t1 MTR_5g054900 97.734 353 8 0 110 462 1 353 0.0 717
MS.gene96525.t1 MTR_5g054900 96.884 353 7 1 110 462 1 349 0.0 705
MS.gene96525.t1 MTR_7g089800 54.773 440 180 11 24 462 2 423 2.05e-153 442
MS.gene96525.t1 MTR_7g089800 54.773 440 180 11 24 462 31 452 3.67e-153 443
MS.gene96525.t1 MTR_8g040120 60.920 348 124 3 122 462 124 466 9.27e-142 414
MS.gene96525.t1 MTR_1g111310 55.711 429 107 10 64 462 332 707 3.33e-138 414
MS.gene96525.t1 MTR_1g111310 60.831 337 103 5 136 456 3 326 2.45e-117 360
MS.gene96525.t1 MTR_3g087940 49.856 347 159 3 124 462 22 361 1.94e-110 330
MS.gene96525.t1 MTR_7g092750 51.935 310 139 3 160 462 56 362 3.19e-107 322
MS.gene96525.t1 MTR_7g092750 51.935 310 139 3 160 462 157 463 1.53e-106 324
MS.gene96525.t1 MTR_4g053250 49.541 327 143 4 141 462 152 461 7.55e-102 313
MS.gene96525.t1 MTR_2g086420 53.472 288 124 2 175 462 191 468 1.97e-101 312
MS.gene96525.t1 MTR_2g086420 53.472 288 124 2 175 462 192 469 2.30e-101 312
MS.gene96525.t1 MTR_0126s0080 50.175 285 131 3 139 415 178 459 2.77e-93 290
MS.gene96525.t1 MTR_7g092750 46.452 310 130 4 160 462 157 437 8.62e-88 275
MS.gene96525.t1 MTR_8g091650 44.509 346 166 6 124 462 30 356 1.39e-84 264
MS.gene96525.t1 MTR_8g091650 49.129 287 134 3 180 462 5 283 4.23e-84 260
MS.gene96525.t1 MTR_8g091650 48.966 290 136 3 177 462 111 392 4.07e-83 261
MS.gene96525.t1 MTR_5g060950 46.341 287 143 2 177 459 67 346 2.29e-79 251
MS.gene96525.t1 MTR_3g044820 68.208 173 44 3 168 329 36 208 1.68e-77 241
MS.gene96525.t1 MTR_3g073560 44.483 290 150 2 175 460 63 345 4.33e-76 249
MS.gene96525.t1 MTR_1g111320 43.878 196 42 8 64 240 65 211 1.87e-31 120
MS.gene96525.t1 MTR_8g094690 26.556 241 149 4 237 449 7 247 9.30e-13 68.9
MS.gene96525.t1 MTR_1g090370 27.830 212 123 6 249 455 42 228 7.35e-12 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene96525.t1 AT1G68640 50.737 475 193 9 3 462 4 452 9.24e-142 414
MS.gene96525.t1 AT3G12250 63.333 330 109 5 143 462 3 330 1.50e-136 396
MS.gene96525.t1 AT3G12250 63.333 330 109 5 143 462 3 330 1.50e-136 396
MS.gene96525.t1 AT3G12250 63.333 330 109 5 143 462 3 330 1.50e-136 396
MS.gene96525.t1 AT3G12250 63.333 330 109 5 143 462 3 330 1.50e-136 396
MS.gene96525.t1 AT3G12250 63.694 314 107 3 154 462 13 324 1.77e-134 390
MS.gene96525.t1 AT3G12250 67.014 288 94 1 175 462 17 303 3.56e-134 389
MS.gene96525.t1 AT5G06950 68.403 288 90 1 175 462 44 330 6.01e-134 389
MS.gene96525.t1 AT5G06950 68.403 288 90 1 175 462 44 330 6.01e-134 389
MS.gene96525.t1 AT5G06950 68.403 288 90 1 175 462 44 330 6.01e-134 389
MS.gene96525.t1 AT5G06950 68.403 288 90 1 175 462 44 330 6.01e-134 389
MS.gene96525.t1 AT5G06950 68.403 288 90 1 175 462 44 330 6.01e-134 389
MS.gene96525.t1 AT3G12250 68.056 288 91 1 175 462 69 355 6.19e-133 388
MS.gene96525.t1 AT5G06960 62.500 288 107 1 175 462 24 310 2.82e-122 359
MS.gene96525.t1 AT5G06960 63.542 288 104 1 175 462 44 330 3.01e-122 360
MS.gene96525.t1 AT5G06960 63.542 288 104 1 175 462 44 330 3.01e-122 360
MS.gene96525.t1 AT1G08320 55.903 288 117 2 175 462 52 329 1.23e-110 331
MS.gene96525.t1 AT1G08320 55.903 288 117 2 175 462 52 329 1.23e-110 331
MS.gene96525.t1 AT1G08320 55.903 288 117 2 175 462 176 453 4.75e-109 331
MS.gene96525.t1 AT1G08320 55.903 288 117 2 175 462 176 453 4.75e-109 331
MS.gene96525.t1 AT1G08320 55.903 288 117 2 175 462 176 453 4.75e-109 331
MS.gene96525.t1 AT5G06839 52.632 323 140 4 152 462 94 415 4.15e-108 327
MS.gene96525.t1 AT5G06839 52.500 320 140 3 155 462 139 458 7.54e-108 327
MS.gene96525.t1 AT5G06839 53.086 324 138 5 152 462 94 416 8.75e-108 326
MS.gene96525.t1 AT5G10030 51.385 325 144 5 144 462 46 362 1.25e-101 308
MS.gene96525.t1 AT5G10030 51.385 325 144 5 144 462 46 362 1.25e-101 308
MS.gene96525.t1 AT5G10030 51.385 325 144 5 144 462 46 362 1.25e-101 308
MS.gene96525.t1 AT5G10030 51.385 325 144 5 144 462 46 362 1.25e-101 308
MS.gene96525.t1 AT5G10030 51.385 325 144 5 144 462 46 362 1.25e-101 308
MS.gene96525.t1 AT1G77920 47.965 344 162 6 122 462 37 366 1.45e-98 300
MS.gene96525.t1 AT1G22070 52.159 301 134 4 166 462 88 382 5.93e-97 297
MS.gene96525.t1 AT5G65210 53.103 290 125 4 177 462 14 296 9.86e-96 291
MS.gene96525.t1 AT5G65210 53.103 290 125 4 177 462 84 366 2.53e-95 292
MS.gene96525.t1 AT5G65210 53.103 290 125 4 177 462 84 366 2.53e-95 292
MS.gene96525.t1 AT5G65210 53.103 290 125 4 177 462 84 366 2.53e-95 292
MS.gene96525.t1 AT5G65210 53.103 290 125 4 177 462 84 366 2.53e-95 292
MS.gene96525.t1 AT5G65210 53.103 290 125 4 177 462 84 366 2.53e-95 292
MS.gene96525.t1 AT5G65210 53.103 290 125 4 177 462 84 366 2.53e-95 292

Find 108 sgRNAs with CRISPR-Local

Find 224 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGAGTGACCGTTTCCTTTAT+TGG 0.194973 5.1:-42947787 None:intergenic
AAGTCGAACAATATTGTTAT+TGG 0.307310 5.1:+42946605 MS.gene96525:CDS
GTTGAGAATTGGGCTGATTC+TGG 0.310388 5.1:+42947460 MS.gene96525:CDS
GGGAATAGCTTCCTTGCCTT+TGG 0.313064 5.1:+42947426 MS.gene96525:CDS
GATGTATTTCACATGCTCTA+TGG 0.319460 5.1:+42948669 MS.gene96525:CDS
ACTTTATGTTAGTCCAATAA+AGG 0.326812 5.1:+42947774 MS.gene96525:intron
CATTTACCTTCTTCCGTAAC+CGG 0.349444 5.1:-42947973 None:intergenic
CATGTAATCAGATACATTTC+CGG 0.361147 5.1:-42949200 None:intergenic
TCAGTATCCGGTACAGGTTC+CGG 0.367258 5.1:+42949181 MS.gene96525:CDS
GGTGGTAGTAACATGCAGTA+TGG 0.375687 5.1:+42946626 MS.gene96525:CDS
GAAATTGTCATGTTGAGAAT+TGG 0.381065 5.1:+42947449 MS.gene96525:CDS
CAAGTCCGCCCCTACTCCCT+TGG 0.382396 5.1:-42949668 None:intergenic
TACGAGCACTTAGTTCGTTA+TGG 0.393700 5.1:+42949636 MS.gene96525:CDS
TTCAAATGGTGCAGGGTGTT+CGG 0.396217 5.1:+42947360 MS.gene96525:CDS
GGTCATTCTTCTGTTGGAAA+TGG 0.397460 5.1:+42948316 MS.gene96525:CDS
GGAATAGCTTCCTTGCCTTT+GGG 0.406539 5.1:+42947427 MS.gene96525:CDS
TGTTCATTGCAAATGCCATC+TGG 0.411477 5.1:-42949225 None:intergenic
GGTGCAGGGTGTTCGGATGC+AGG 0.422787 5.1:+42947367 MS.gene96525:CDS
GTGATCTTCAGCTCTGAACT+TGG 0.429104 5.1:-42947820 None:intergenic
ATCGGCGTTAAATTCTCAAA+TGG 0.431815 5.1:+42948560 MS.gene96525:CDS
GTTGGCACGCCCAAGGGAGT+AGG 0.432197 5.1:+42949658 MS.gene96525:CDS
AATGAACAAGCTTGCACTCC+TGG 0.437038 5.1:+42949240 MS.gene96525:CDS
TCTGCTTGTCGATGGTGTTA+TGG 0.438171 5.1:+42948599 MS.gene96525:CDS
CGGAAATGTATCTGATTACA+TGG 0.440246 5.1:+42949201 MS.gene96525:CDS
GCCACCAACCCTTCTTGCTT+AGG 0.443177 5.1:+42946285 MS.gene96525:CDS
TTCACATGCTCTATGGGTTG+TGG 0.444720 5.1:+42948676 MS.gene96525:CDS
GAAGAATGACCTTGATCTCC+TGG 0.454057 5.1:-42948304 None:intergenic
TTGGCACGCCCAAGGGAGTA+GGG 0.457145 5.1:+42949659 MS.gene96525:CDS
TCCTCCACACCCTCAGTATC+CGG 0.457605 5.1:+42949169 MS.gene96525:CDS
GTTAACTGAAAATCAGTTGA+TGG 0.459301 5.1:+42949054 MS.gene96525:CDS
AAGTCCGCCCCTACTCCCTT+GGG 0.467619 5.1:-42949667 None:intergenic
AAATTGTCATGTTGAGAATT+GGG 0.469910 5.1:+42947450 MS.gene96525:CDS
TATTTAGATTAAAGAGCATA+GGG 0.475914 5.1:+42948637 MS.gene96525:CDS
ATTGCAAATCCAGGAGATCA+AGG 0.479524 5.1:+42948295 MS.gene96525:CDS
TGACATGGAATACGCCCATT+GGG 0.481705 5.1:+42948503 MS.gene96525:CDS
GCTTCAACGAGTACGTCAAC+AGG 0.481742 5.1:+42948176 MS.gene96525:CDS
ATGTATTTCACATGCTCTAT+GGG 0.482660 5.1:+42948670 MS.gene96525:CDS
GATCAAGGTCATTCTTCTGT+TGG 0.485204 5.1:+42948310 MS.gene96525:CDS
TGTTAGTCCAATAAAGGAAA+CGG 0.491384 5.1:+42947780 MS.gene96525:intron
GAGATTACTTCAAATGGTGC+AGG 0.493511 5.1:+42947352 MS.gene96525:CDS
TCTGCAGAGATTACTTCAAA+TGG 0.501428 5.1:+42947346 MS.gene96525:CDS
TCGAACAATATTGTTATTGG+TGG 0.502911 5.1:+42946608 MS.gene96525:CDS
GGCATGTTTATTGCAAATCC+AGG 0.503604 5.1:+42948286 MS.gene96525:CDS
TTGACATGGAATACGCCCAT+TGG 0.507084 5.1:+42948502 MS.gene96525:CDS
ATAGGCATATGTACAACAGC+TGG 0.511396 5.1:+42948116 MS.gene96525:intron
GCATCTTGTTGTGGAAAGAA+AGG 0.513779 5.1:-42946455 None:intergenic
CTCAGAATCGCGAGGCGGCA+AGG 0.517608 5.1:+42947945 MS.gene96525:CDS
CGTTATGGTTGGCACGCCCA+AGG 0.525689 5.1:+42949651 MS.gene96525:CDS
TACATTTCCGGAACCTGTAC+CGG 0.526133 5.1:-42949188 None:intergenic
AGCACTTAGTTCGTTATGGT+TGG 0.528902 5.1:+42949640 MS.gene96525:CDS
TCGGCGTTAAATTCTCAAAT+GGG 0.530762 5.1:+42948561 MS.gene96525:CDS
TCTTCAGCAGTCTACTCAGC+AGG 0.536008 5.1:+42949087 MS.gene96525:CDS
GAAGAGCCGGTTACGGAAGA+AGG 0.537480 5.1:+42947967 MS.gene96525:CDS
GTGCAGGGTGTTCGGATGCA+GGG 0.541110 5.1:+42947368 MS.gene96525:CDS
ACTCACTTGGTGTTTATCAT+CGG 0.542557 5.1:-42947542 None:intergenic
CAAACATACCTAAGCAAGAA+GGG 0.547170 5.1:-42946293 None:intergenic
TTGATGCTCGTCAACCCAAT+GGG 0.548501 5.1:-42948517 None:intergenic
CGGCAAGGAAGAGCCGGTTA+CGG 0.550063 5.1:+42947960 MS.gene96525:CDS
GCAGAGTTTCTTGCTTCAAG+AGG 0.550378 5.1:-42949538 None:intergenic
ACCTAAGCAAGAAGGGTTGG+TGG 0.551481 5.1:-42946286 None:intergenic
TGACGACACGTCAGACTGCA+AGG 0.551582 5.1:+42949579 MS.gene96525:CDS
CCTTGTGAAGGAAATCCTCC+AGG 0.552077 5.1:-42949258 None:intergenic
TTAACTGAAAATCAGTTGAT+GGG 0.554063 5.1:+42949055 MS.gene96525:CDS
GCGAGGCGGCAAGGAAGAGC+CGG 0.555351 5.1:+42947954 MS.gene96525:CDS
GTTATGGTTGGCACGCCCAA+GGG 0.555357 5.1:+42949652 MS.gene96525:CDS
GTGGTAGTAACATGCAGTAT+GGG 0.556094 5.1:+42946627 MS.gene96525:CDS
ATCTGATTACATGGGCCAGA+TGG 0.556171 5.1:+42949210 MS.gene96525:CDS
TGGAAGTATCATCAGTCTGT+TGG 0.557670 5.1:-42947501 None:intergenic
CCTTGAGAATTTCAGATGAA+CGG 0.560398 5.1:-42948740 None:intergenic
GCAGTCTACTCAGCAGGCTG+AGG 0.561351 5.1:+42949093 MS.gene96525:CDS
GTTGATGCTCGTCAACCCAA+TGG 0.564292 5.1:-42948518 None:intergenic
TTATTTAGATTAAAGAGCAT+AGG 0.568168 5.1:+42948636 MS.gene96525:CDS
ACACCCTCAGTATCCGGTAC+AGG 0.569132 5.1:+42949175 MS.gene96525:CDS
GATTCTGAGCAAGTCTGCGA+AGG 0.570330 5.1:-42947931 None:intergenic
CCGTTCATCTGAAATTCTCA+AGG 0.573160 5.1:+42948740 MS.gene96525:CDS
TGGCACGCCCAAGGGAGTAG+GGG 0.576284 5.1:+42949660 MS.gene96525:CDS
AAATCAACAGCATCTTGTTG+TGG 0.584033 5.1:-42946464 None:intergenic
CATACCTAAGCAAGAAGGGT+TGG 0.587270 5.1:-42946289 None:intergenic
CCTGGAGGATTTCCTTCACA+AGG 0.589186 5.1:+42949258 MS.gene96525:CDS
GCTGAGGATGCTTTATCTCA+CGG 0.592632 5.1:+42949109 MS.gene96525:CDS
TGTACCGGATACTGAGGGTG+TGG 0.601254 5.1:-42949173 None:intergenic
GAATTGGGCTGATTCTGGTG+TGG 0.601339 5.1:+42947465 MS.gene96525:CDS
AAATGTAATCATTTCTGACA+AGG 0.602307 5.1:-42949607 None:intergenic
ACAAACATACCTAAGCAAGA+AGG 0.605783 5.1:-42946294 None:intergenic
ATGACAATTTCCCAAAGGCA+AGG 0.624956 5.1:-42947437 None:intergenic
GGTATCGATATCAATATCAG+TGG 0.627662 5.1:-42947521 None:intergenic
ATTCTGAGCAAGTCTGCGAA+GGG 0.627771 5.1:-42947930 None:intergenic
AGGTGCTCTAGCATTTGACA+TGG 0.632527 5.1:+42948488 MS.gene96525:intron
TCAACATGACAATTTCCCAA+AGG 0.632745 5.1:-42947442 None:intergenic
TATGCTCAATGATCTAAGAT+CGG 0.636922 5.1:+42948542 MS.gene96525:CDS
ACCGGATACTGAGGGTGTGG+AGG 0.638958 5.1:-42949170 None:intergenic
GGAACCTGTACCGGATACTG+AGG 0.640922 5.1:-42949179 None:intergenic
GACGACACGTCAGACTGCAA+GGG 0.641820 5.1:+42949580 MS.gene96525:CDS
GTTCAGAGCTGAAGATCACA+AGG 0.647306 5.1:+42947824 MS.gene96525:CDS
GGATGCTTTATCTCACGGCA+TGG 0.651448 5.1:+42949114 MS.gene96525:CDS
GAACAAGCTTGCACTCCTGG+AGG 0.653361 5.1:+42949243 MS.gene96525:CDS
GAATTGCATCTGCTTGTCGA+TGG 0.653447 5.1:+42948591 MS.gene96525:CDS
AGATTACTTCAAATGGTGCA+GGG 0.655273 5.1:+42947353 MS.gene96525:CDS
TTTCAGTTAACGGCTCGAGG+TGG 0.666369 5.1:-42949042 None:intergenic
GTATGGGACAACAATTAACA+TGG 0.671970 5.1:+42946643 MS.gene96525:CDS
CAGACTTGCTCAGAATCGCG+AGG 0.675205 5.1:+42947937 MS.gene96525:CDS
GGAAATGTATCTGATTACAT+GGG 0.675444 5.1:+42949202 MS.gene96525:CDS
ATTTAGATTAAAGAGCATAG+GGG 0.679279 5.1:+42948638 MS.gene96525:CDS
GAACCTGTACCGGATACTGA+GGG 0.682981 5.1:-42949178 None:intergenic
GCAGCAACTGATGTACAACA+AGG 0.689178 5.1:+42947405 MS.gene96525:CDS
ATAGAGCATGTGAAATACAT+CGG 0.690239 5.1:-42948667 None:intergenic
ACTTGCTCAGAATCGCGAGG+CGG 0.696700 5.1:+42947940 MS.gene96525:CDS
CAGCAACTGATGTACAACAA+GGG 0.723615 5.1:+42947406 MS.gene96525:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GACTAAAATAAAATTATGTT+AGG - chr5.1:42946703-42946722 None:intergenic 15.0%
!!! CCATTTTTTTGATAAAATTA+GGG - chr5.1:42947212-42947231 None:intergenic 15.0%
!!! TCCATTTTTTTGATAAAATT+AGG - chr5.1:42947213-42947232 None:intergenic 15.0%
!!! TTAAGCTTTAATGATATATA+CGG + chr5.1:42948081-42948100 MS.gene96525:intron 15.0%
!! AATATAGATACATATGCAAA+AGG - chr5.1:42948022-42948041 None:intergenic 20.0%
!! ATAATGTTTATTGATCATTC+AGG + chr5.1:42948468-42948487 MS.gene96525:intron 20.0%
!! CAAATAAAAAATCTTTCTAC+TGG - chr5.1:42948708-42948727 None:intergenic 20.0%
!! TTAAAAAACACACTATGAAT+TGG - chr5.1:42948773-42948792 None:intergenic 20.0%
!! TTCAATTGTATTGTTTGTAT+CGG - chr5.1:42947615-42947634 None:intergenic 20.0%
!!! AAAAAATGGACTTAATAAAC+TGG + chr5.1:42947223-42947242 MS.gene96525:intron 20.0%
!!! AAAAATGGACTTAATAAACT+GGG + chr5.1:42947224-42947243 MS.gene96525:intron 20.0%
!!! CAGTAGAAAGATTTTTTATT+TGG + chr5.1:42948706-42948725 MS.gene96525:CDS 20.0%
!!! CCCTAATTTTATCAAAAAAA+TGG + chr5.1:42947209-42947228 MS.gene96525:intron 20.0%
!!! TATTTAGATTAAAGAGCATA+GGG + chr5.1:42948637-42948656 MS.gene96525:CDS 20.0%
!!! TTATTTAGATTAAAGAGCAT+AGG + chr5.1:42948636-42948655 MS.gene96525:CDS 20.0%
!!! TTCATAGTGTGTTTTTTAAT+TGG + chr5.1:42948774-42948793 MS.gene96525:intron 20.0%
!!! TTTTTTGATAAAATTAGGGA+AGG - chr5.1:42947208-42947227 None:intergenic 20.0%
! AAATGTAATCATTTCTGACA+AGG - chr5.1:42949610-42949629 None:intergenic 25.0%
! AAATTGTCATGTTGAGAATT+GGG + chr5.1:42947450-42947469 MS.gene96525:CDS 25.0%
! AAGTCGAACAATATTGTTAT+TGG + chr5.1:42946605-42946624 MS.gene96525:CDS 25.0%
! ACAAAAAATTCACATGAAGA+CGG - chr5.1:42949401-42949420 None:intergenic 25.0%
! ACTTTATGTTAGTCCAATAA+AGG + chr5.1:42947774-42947793 MS.gene96525:intron 25.0%
! AGTTAATCTTTCTATGCTAA+GGG + chr5.1:42949295-42949314 MS.gene96525:intron 25.0%
! ATCATTAACTCTTACACTTT+AGG + chr5.1:42946787-42946806 MS.gene96525:intron 25.0%
! ATGATTATTAGTGTAACACT+AGG + chr5.1:42946902-42946921 MS.gene96525:intron 25.0%
! CAATAAACATTATCACAACA+CGG - chr5.1:42948461-42948480 None:intergenic 25.0%
! CTAACCTCATTAAAATTACA+GGG - chr5.1:42947073-42947092 None:intergenic 25.0%
! TTAACTGAAAATCAGTTGAT+GGG + chr5.1:42949055-42949074 MS.gene96525:CDS 25.0%
! TTAATGATATATACGGATGT+TGG + chr5.1:42948088-42948107 MS.gene96525:intron 25.0%
!! ATATCTATTTTACCTTGTGA+AGG - chr5.1:42949273-42949292 None:intergenic 25.0%
!! ATTTAGATTAAAGAGCATAG+GGG + chr5.1:42948638-42948657 MS.gene96525:CDS 25.0%
!! ATTTTGAACACTATACTTTG+AGG - chr5.1:42946855-42946874 None:intergenic 25.0%
!! TGATTCTAAAGAACAATTTG+TGG - chr5.1:42946771-42946790 None:intergenic 25.0%
!! TTCTCTTCTTTTACATGTTT+TGG + chr5.1:42946501-42946520 MS.gene96525:intron 25.0%
!! TTGATTCTGTAATTTTCATG+AGG + chr5.1:42946936-42946955 MS.gene96525:intron 25.0%
!! TTGTGTTTTCATAGAATGTT+GGG + chr5.1:42947323-42947342 MS.gene96525:intron 25.0%
!! TTTGTGTTTTCATAGAATGT+TGG + chr5.1:42947322-42947341 MS.gene96525:intron 25.0%
!!! ATATTTTTGTTGTAGACCAA+GGG + chr5.1:42948037-42948056 MS.gene96525:intron 25.0%
!!! ATCAACTGATTTTCAGTTAA+CGG - chr5.1:42949055-42949074 None:intergenic 25.0%
!!! ATTATGTTGCATTTTTTCAC+AGG - chr5.1:42946726-42946745 None:intergenic 25.0%
!!! GAAAGATTTTTTATTTGGCA+TGG + chr5.1:42948711-42948730 MS.gene96525:CDS 25.0%
!!! TATATTTTTGTTGTAGACCA+AGG + chr5.1:42948036-42948055 MS.gene96525:intron 25.0%
!!! TCTATTTTTCACATTCATCA+AGG - chr5.1:42949353-42949372 None:intergenic 25.0%
!!! TGTTTTTTAATTGGAGAATG+AGG + chr5.1:42948783-42948802 MS.gene96525:intron 25.0%
!!! TTATGTTGCATTTTTTCACA+GGG - chr5.1:42946725-42946744 None:intergenic 25.0%
!!! TTTAAACTGTTTTTTTGTGC+AGG + chr5.1:42946563-42946582 MS.gene96525:intron 25.0%
!!! TTTTAATCTAGTTCCTGATT+TGG + chr5.1:42947890-42947909 MS.gene96525:intron 25.0%
AACCTCTTGAGTAAAAAACA+GGG + chr5.1:42946968-42946987 MS.gene96525:intron 30.0%
ACTTTATAACACAAGGGAAA+AGG - chr5.1:42948871-42948890 None:intergenic 30.0%
AGCAAAACATGTATGAGAAA+TGG - chr5.1:42947575-42947594 None:intergenic 30.0%
AGCTTGACTTTATAACACAA+GGG - chr5.1:42948877-42948896 None:intergenic 30.0%
AGGATAAACTATTACTTGCT+AGG - chr5.1:42947269-42947288 None:intergenic 30.0%
ATAGAGCATGTGAAATACAT+CGG - chr5.1:42948670-42948689 None:intergenic 30.0%
ATGTATTTCACATGCTCTAT+GGG + chr5.1:42948670-42948689 MS.gene96525:CDS 30.0%
CAGTTAATCTTTCTATGCTA+AGG + chr5.1:42949294-42949313 MS.gene96525:intron 30.0%
CATGTAATCAGATACATTTC+CGG - chr5.1:42949203-42949222 None:intergenic 30.0%
CATTAAAATTCACAACCATG+AGG - chr5.1:42948263-42948282 None:intergenic 30.0%
GAAATTGTCATGTTGAGAAT+TGG + chr5.1:42947449-42947468 MS.gene96525:CDS 30.0%
GATGCAAAACAAACAACATA+AGG - chr5.1:42947289-42947308 None:intergenic 30.0%
GATTGTACATAAACATCAAC+TGG - chr5.1:42948227-42948246 None:intergenic 30.0%
GCTAACCTCATTAAAATTAC+AGG - chr5.1:42947074-42947093 None:intergenic 30.0%
GCTTTCTCTAGTGATAAAAA+TGG + chr5.1:42946334-42946353 MS.gene96525:intron 30.0%
GGAAATGTATCTGATTACAT+GGG + chr5.1:42949202-42949221 MS.gene96525:CDS 30.0%
GTTAACTGAAAATCAGTTGA+TGG + chr5.1:42949054-42949073 MS.gene96525:CDS 30.0%
GTTGATGTTTATGTACAATC+TGG + chr5.1:42948227-42948246 MS.gene96525:intron 30.0%
TGTTAGTCCAATAAAGGAAA+CGG + chr5.1:42947780-42947799 MS.gene96525:intron 30.0%
TTGTGTATCTCAATTCAAGA+TGG - chr5.1:42947673-42947692 None:intergenic 30.0%
! ACAATGCGTTTTTCTGATAT+TGG + chr5.1:42946413-42946432 MS.gene96525:CDS 30.0%
! GGATAAACTATTACTTGCTA+GGG - chr5.1:42947268-42947287 None:intergenic 30.0%
! GTTTTTGATGAAACAAACAG+AGG + chr5.1:42946371-42946390 MS.gene96525:intron 30.0%
! TATGCTCAATGATCTAAGAT+CGG + chr5.1:42948542-42948561 MS.gene96525:CDS 30.0%
! TCGAACAATATTGTTATTGG+TGG + chr5.1:42946608-42946627 MS.gene96525:CDS 30.0%
!! AAAAATGGTTCATGCTGTTT+TGG + chr5.1:42946349-42946368 MS.gene96525:intron 30.0%
!! ATGGTTGTGAATTTTAATGC+AGG + chr5.1:42948264-42948283 MS.gene96525:intron 30.0%
!! TATTTTTGTTGTAGACCAAG+GGG + chr5.1:42948038-42948057 MS.gene96525:intron 30.0%
!! TGGTTGTGAATTTTAATGCA+GGG + chr5.1:42948265-42948284 MS.gene96525:intron 30.0%
!! TTGTTGTCATGCTTGTTTTT+AGG + chr5.1:42949511-42949530 MS.gene96525:intron 30.0%
!!! ATACGGATGTTGGTTTTAAT+AGG + chr5.1:42948098-42948117 MS.gene96525:intron 30.0%
!!! TCTGGTTTTTTTTTTCCTCA+TGG + chr5.1:42948245-42948264 MS.gene96525:intron 30.0%
AAACATTATCACAACACGGT+GGG - chr5.1:42948457-42948476 None:intergenic 35.0%
AAATCAACAGCATCTTGTTG+TGG - chr5.1:42946467-42946486 None:intergenic 35.0%
AAATGGTCTCGATGGAAATA+TGG + chr5.1:42947991-42948010 MS.gene96525:intron 35.0%
AACATGTATGAGAAATGGAG+AGG - chr5.1:42947570-42947589 None:intergenic 35.0%
AACCATGTGTTTGAACTACT+TGG - chr5.1:42949464-42949483 None:intergenic 35.0%
AATGGTCTCGATGGAAATAT+GGG + chr5.1:42947992-42948011 MS.gene96525:intron 35.0%
ACAAACATACCTAAGCAAGA+AGG - chr5.1:42946297-42946316 None:intergenic 35.0%
AGATTACTTCAAATGGTGCA+GGG + chr5.1:42947353-42947372 MS.gene96525:CDS 35.0%
ATCGGCGTTAAATTCTCAAA+TGG + chr5.1:42948560-42948579 MS.gene96525:CDS 35.0%
ATTAAAATTACAGGGCAACC+TGG - chr5.1:42947065-42947084 None:intergenic 35.0%
CAAACATACCTAAGCAAGAA+GGG - chr5.1:42946296-42946315 None:intergenic 35.0%
CAACCTCTTGAGTAAAAAAC+AGG + chr5.1:42946967-42946986 MS.gene96525:intron 35.0%
CCTTGAGAATTTCAGATGAA+CGG - chr5.1:42948743-42948762 None:intergenic 35.0%
CGGAAATGTATCTGATTACA+TGG + chr5.1:42949201-42949220 MS.gene96525:CDS 35.0%
CGTACAATACACCAAATAGT+GGG + chr5.1:42946999-42947018 MS.gene96525:intron 35.0%
GAGCTTGACTTTATAACACA+AGG - chr5.1:42948878-42948897 None:intergenic 35.0%
GATGTATTTCACATGCTCTA+TGG + chr5.1:42948669-42948688 MS.gene96525:CDS 35.0%
GTACTGTTGAATTGACTATG+AGG - chr5.1:42948918-42948937 None:intergenic 35.0%
GTATGGGACAACAATTAACA+TGG + chr5.1:42946643-42946662 MS.gene96525:CDS 35.0%
TAAACATTATCACAACACGG+TGG - chr5.1:42948458-42948477 None:intergenic 35.0%
TCAACATGACAATTTCCCAA+AGG - chr5.1:42947445-42947464 None:intergenic 35.0%
TCGGCGTTAAATTCTCAAAT+GGG + chr5.1:42948561-42948580 MS.gene96525:CDS 35.0%
TCTGCAGAGATTACTTCAAA+TGG + chr5.1:42947346-42947365 MS.gene96525:CDS 35.0%
TTAGCTCAGTTATTAGAGCT+TGG + chr5.1:42947089-42947108 MS.gene96525:intron 35.0%
! AATTCAAATTCCCTCTGAGA+CGG + chr5.1:42946872-42946891 MS.gene96525:intron 35.0%
! ATGTTAAACTCTTTTCACCG+AGG - chr5.1:42946827-42946846 None:intergenic 35.0%
! ATTTTACAACTATCTCCGAG+AGG - chr5.1:42947146-42947165 None:intergenic 35.0%
! TTTTACAACTATCTCCGAGA+GGG - chr5.1:42947145-42947164 None:intergenic 35.0%
!! ACTCACTTGGTGTTTATCAT+CGG - chr5.1:42947545-42947564 None:intergenic 35.0%
!! GAAAAAAGAGCATCCAAATC+AGG - chr5.1:42947906-42947925 None:intergenic 35.0%
!! GGTATCGATATCAATATCAG+TGG - chr5.1:42947524-42947543 None:intergenic 35.0%
!! GTTGCCCTGTAATTTTAATG+AGG + chr5.1:42947066-42947085 MS.gene96525:intron 35.0%
!!! TACCCTGTTTTTTACTCAAG+AGG - chr5.1:42946973-42946992 None:intergenic 35.0%
AAATGGAGAGGTAACTCACT+TGG - chr5.1:42947558-42947577 None:intergenic 40.0%
AACATTATCACAACACGGTG+GGG - chr5.1:42948456-42948475 None:intergenic 40.0%
AAGAAGGTAAATGGTCTCGA+TGG + chr5.1:42947983-42948002 MS.gene96525:intron 40.0%
AGAGTGACCGTTTCCTTTAT+TGG - chr5.1:42947790-42947809 None:intergenic 40.0%
AGCACTTAGTTCGTTATGGT+TGG + chr5.1:42949640-42949659 MS.gene96525:CDS 40.0%
AGTGATGTTCAAATCCCTCT+CGG + chr5.1:42947128-42947147 MS.gene96525:intron 40.0%
ATAGGCATATGTACAACAGC+TGG + chr5.1:42948116-42948135 MS.gene96525:intron 40.0%
ATGACAATTTCCCAAAGGCA+AGG - chr5.1:42947440-42947459 None:intergenic 40.0%
ATTGCAAATCCAGGAGATCA+AGG + chr5.1:42948295-42948314 MS.gene96525:CDS 40.0%
CAAGGGGTTACTGAATTCAA+AGG + chr5.1:42948054-42948073 MS.gene96525:intron 40.0%
CACATGAAGACGGTAACTTA+GGG - chr5.1:42949391-42949410 None:intergenic 40.0%
CAGCAACTGATGTACAACAA+GGG + chr5.1:42947406-42947425 MS.gene96525:CDS 40.0%
CATTTACCTTCTTCCGTAAC+CGG - chr5.1:42947976-42947995 None:intergenic 40.0%
CTTTGAATTCAGTAACCCCT+TGG - chr5.1:42948056-42948075 None:intergenic 40.0%
GAGATTACTTCAAATGGTGC+AGG + chr5.1:42947352-42947371 MS.gene96525:CDS 40.0%
GATCAAGGTCATTCTTCTGT+TGG + chr5.1:42948310-42948329 MS.gene96525:CDS 40.0%
GCGTACAATACACCAAATAG+TGG + chr5.1:42946998-42947017 MS.gene96525:intron 40.0%
GGCATGTTTATTGCAAATCC+AGG + chr5.1:42948286-42948305 MS.gene96525:CDS 40.0%
GGTCATTCTTCTGTTGGAAA+TGG + chr5.1:42948316-42948335 MS.gene96525:CDS 40.0%
GTGGTAGTAACATGCAGTAT+GGG + chr5.1:42946627-42946646 MS.gene96525:CDS 40.0%
TACGAGCACTTAGTTCGTTA+TGG + chr5.1:42949636-42949655 MS.gene96525:CDS 40.0%
TCACATGAAGACGGTAACTT+AGG - chr5.1:42949392-42949411 None:intergenic 40.0%
TGTTCATTGCAAATGCCATC+TGG - chr5.1:42949228-42949247 None:intergenic 40.0%
TTGAACTACTTGGCGAAGAA+GGG - chr5.1:42949454-42949473 None:intergenic 40.0%
TTTGAACTACTTGGCGAAGA+AGG - chr5.1:42949455-42949474 None:intergenic 40.0%
! CATTTTACAACCGTCTCAGA+GGG - chr5.1:42946885-42946904 None:intergenic 40.0%
! CCGTTCATCTGAAATTCTCA+AGG + chr5.1:42948740-42948759 MS.gene96525:CDS 40.0%
! GCATCTTGTTGTGGAAAGAA+AGG - chr5.1:42946458-42946477 None:intergenic 40.0%
! TCATTTTACAACCGTCTCAG+AGG - chr5.1:42946886-42946905 None:intergenic 40.0%
! TGTGTTTTGCTGACATCTGA+TGG + chr5.1:42947740-42947759 MS.gene96525:intron 40.0%
!! TGGAAGTATCATCAGTCTGT+TGG - chr5.1:42947504-42947523 None:intergenic 40.0%
AATGAACAAGCTTGCACTCC+TGG + chr5.1:42949240-42949259 MS.gene96525:CDS 45.0%
ACATTATCACAACACGGTGG+GGG - chr5.1:42948455-42948474 None:intergenic 45.0%
AGGTGCTCTAGCATTTGACA+TGG + chr5.1:42948488-42948507 MS.gene96525:intron 45.0%
ATCTGATTACATGGGCCAGA+TGG + chr5.1:42949210-42949229 MS.gene96525:CDS 45.0%
ATTCTGAGCAAGTCTGCGAA+GGG - chr5.1:42947933-42947952 None:intergenic 45.0%
CATACCTAAGCAAGAAGGGT+TGG - chr5.1:42946292-42946311 None:intergenic 45.0%
CGCCAAGTAGTTCAAACACA+TGG + chr5.1:42949459-42949478 MS.gene96525:intron 45.0%
CGGTTACGGAAGAAGGTAAA+TGG + chr5.1:42947974-42947993 MS.gene96525:intron 45.0%
GAAGAATGACCTTGATCTCC+TGG - chr5.1:42948307-42948326 None:intergenic 45.0%
GAATTGCATCTGCTTGTCGA+TGG + chr5.1:42948591-42948610 MS.gene96525:CDS 45.0%
GCAGAGTTTCTTGCTTCAAG+AGG - chr5.1:42949541-42949560 None:intergenic 45.0%
GCAGCAACTGATGTACAACA+AGG + chr5.1:42947405-42947424 MS.gene96525:CDS 45.0%
GCTGAGGATGCTTTATCTCA+CGG + chr5.1:42949109-42949128 MS.gene96525:CDS 45.0%
GGAATAGCTTCCTTGCCTTT+GGG + chr5.1:42947427-42947446 MS.gene96525:CDS 45.0%
GGATTTGAACATCACTCCCT+CGG - chr5.1:42947124-42947143 None:intergenic 45.0%
GGTGGTAGTAACATGCAGTA+TGG + chr5.1:42946626-42946645 MS.gene96525:CDS 45.0%
GTTCAGAGCTGAAGATCACA+AGG + chr5.1:42947824-42947843 MS.gene96525:CDS 45.0%
TACATTTCCGGAACCTGTAC+CGG - chr5.1:42949191-42949210 None:intergenic 45.0%
TCTTACACTTTAGGCGCTAC+AGG + chr5.1:42946796-42946815 MS.gene96525:intron 45.0%
TGACATGGAATACGCCCATT+GGG + chr5.1:42948503-42948522 MS.gene96525:CDS 45.0%
TTGACATGGAATACGCCCAT+TGG + chr5.1:42948502-42948521 MS.gene96525:CDS 45.0%
TTGATGCTCGTCAACCCAAT+GGG - chr5.1:42948520-42948539 None:intergenic 45.0%
! GATTTTCAGTTAACGGCTCG+AGG - chr5.1:42949048-42949067 None:intergenic 45.0%
! GTTGAGAATTGGGCTGATTC+TGG + chr5.1:42947460-42947479 MS.gene96525:CDS 45.0%
! TCTGCTTGTCGATGGTGTTA+TGG + chr5.1:42948599-42948618 MS.gene96525:CDS 45.0%
! TTCAAATGGTGCAGGGTGTT+CGG + chr5.1:42947360-42947379 MS.gene96525:CDS 45.0%
! TTCACATGCTCTATGGGTTG+TGG + chr5.1:42948676-42948695 MS.gene96525:CDS 45.0%
!! GTGATCTTCAGCTCTGAACT+TGG - chr5.1:42947823-42947842 None:intergenic 45.0%
!! ATTAAGAATAATTAATTATA+TGG - chr5.1:42948975-42948994 None:intergenic 5.0%
!! ATTATTATTAATTAATAAAG+TGG - chr5.1:42947181-42947200 None:intergenic 5.0%
ACCTAAGCAAGAAGGGTTGG+TGG - chr5.1:42946289-42946308 None:intergenic 50.0%
ACTAAAGCTCCTGCATACGC+AGG - chr5.1:42947039-42947058 None:intergenic 50.0%
ACTACTTGGCGAAGAAGGGA+AGG - chr5.1:42949450-42949469 None:intergenic 50.0%
AGGGAAGGTCATACTGGAGT+AGG - chr5.1:42949435-42949454 None:intergenic 50.0%
CCTGGAGGATTTCCTTCACA+AGG + chr5.1:42949258-42949277 MS.gene96525:CDS 50.0%
CCTTGTGAAGGAAATCCTCC+AGG - chr5.1:42949261-42949280 None:intergenic 50.0%
CGAAGAAGGGAAGGTCATAC+TGG - chr5.1:42949441-42949460 None:intergenic 50.0%
CTAAAGCTCCTGCATACGCA+GGG - chr5.1:42947038-42947057 None:intergenic 50.0%
GAACCTGTACCGGATACTGA+GGG - chr5.1:42949181-42949200 None:intergenic 50.0%
GATTCTGAGCAAGTCTGCGA+AGG - chr5.1:42947934-42947953 None:intergenic 50.0%
GCTTCAACGAGTACGTCAAC+AGG + chr5.1:42948176-42948195 MS.gene96525:CDS 50.0%
GGATGCTTTATCTCACGGCA+TGG + chr5.1:42949114-42949133 MS.gene96525:CDS 50.0%
GGGAATAGCTTCCTTGCCTT+TGG + chr5.1:42947426-42947445 MS.gene96525:CDS 50.0%
GTTGATGCTCGTCAACCCAA+TGG - chr5.1:42948521-42948540 None:intergenic 50.0%
TCAGTATCCGGTACAGGTTC+CGG + chr5.1:42949181-42949200 MS.gene96525:CDS 50.0%
TCTTCAGCAGTCTACTCAGC+AGG + chr5.1:42949087-42949106 MS.gene96525:CDS 50.0%
TTTCAGTTAACGGCTCGAGG+TGG - chr5.1:42949045-42949064 None:intergenic 50.0%
! GAATTGGGCTGATTCTGGTG+TGG + chr5.1:42947465-42947484 MS.gene96525:CDS 50.0%
! TGCAGGAGCTTTAGTGTACC+AGG + chr5.1:42947044-42947063 MS.gene96525:intron 50.0%
ACACCCTCAGTATCCGGTAC+AGG + chr5.1:42949175-42949194 MS.gene96525:CDS 55.0%
ACTTGCTCAGAATCGCGAGG+CGG + chr5.1:42947940-42947959 MS.gene96525:CDS 55.0%
CATCACTCCCTCGGCTTACA+AGG - chr5.1:42947115-42947134 None:intergenic 55.0%
GAACAAGCTTGCACTCCTGG+AGG + chr5.1:42949243-42949262 MS.gene96525:CDS 55.0%
GAAGAGCCGGTTACGGAAGA+AGG + chr5.1:42947967-42947986 MS.gene96525:CDS 55.0%
GACGACACGTCAGACTGCAA+GGG + chr5.1:42949580-42949599 MS.gene96525:CDS 55.0%
GCCACCAACCCTTCTTGCTT+AGG + chr5.1:42946285-42946304 MS.gene96525:CDS 55.0%
GGAACCTGTACCGGATACTG+AGG - chr5.1:42949182-42949201 None:intergenic 55.0%
GTTATGGTTGGCACGCCCAA+GGG + chr5.1:42949652-42949671 MS.gene96525:CDS 55.0%
TCCTCCACACCCTCAGTATC+CGG + chr5.1:42949169-42949188 MS.gene96525:CDS 55.0%
TGACGACACGTCAGACTGCA+AGG + chr5.1:42949579-42949598 MS.gene96525:CDS 55.0%
TGTACCGGATACTGAGGGTG+TGG - chr5.1:42949176-42949195 None:intergenic 55.0%
! CAAATAGTGGGACCCCTTCC+CGG + chr5.1:42947011-42947030 MS.gene96525:intron 55.0%
! CAGACTTGCTCAGAATCGCG+AGG + chr5.1:42947937-42947956 MS.gene96525:CDS 55.0%
!! AGCTTGGCCTTGTAAGCCGA+GGG + chr5.1:42947105-42947124 MS.gene96525:intron 55.0%
CGGCAAGGAAGAGCCGGTTA+CGG + chr5.1:42947960-42947979 MS.gene96525:CDS 60.0%
CGGGAAGGGGTCCCACTATT+TGG - chr5.1:42947013-42947032 None:intergenic 60.0%
CGTTATGGTTGGCACGCCCA+AGG + chr5.1:42949651-42949670 MS.gene96525:CDS 60.0%
GCAGTCTACTCAGCAGGCTG+AGG + chr5.1:42949093-42949112 MS.gene96525:CDS 60.0%
! ACCGGATACTGAGGGTGTGG+AGG - chr5.1:42949173-42949192 None:intergenic 60.0%
! GTGCAGGGTGTTCGGATGCA+GGG + chr5.1:42947368-42947387 MS.gene96525:CDS 60.0%
!! GAGCTTGGCCTTGTAAGCCG+AGG + chr5.1:42947104-42947123 MS.gene96525:intron 60.0%
AGGCGCTACAGGCGCTACCT+CGG + chr5.1:42946807-42946826 MS.gene96525:intron 65.0%
CATACGCAGGGTCCGGGAAG+GGG - chr5.1:42947026-42947045 None:intergenic 65.0%
CTCAGAATCGCGAGGCGGCA+AGG + chr5.1:42947945-42947964 MS.gene96525:CDS 65.0%
CTCCTGCATACGCAGGGTCC+GGG - chr5.1:42947032-42947051 None:intergenic 65.0%
GCATACGCAGGGTCCGGGAA+GGG - chr5.1:42947027-42947046 None:intergenic 65.0%
GCTCCTGCATACGCAGGGTC+CGG - chr5.1:42947033-42947052 None:intergenic 65.0%
TGCATACGCAGGGTCCGGGA+AGG - chr5.1:42947028-42947047 None:intergenic 65.0%
TTCCCGGACCCTGCGTATGC+AGG + chr5.1:42947027-42947046 MS.gene96525:intron 65.0%
! GGTGCAGGGTGTTCGGATGC+AGG + chr5.1:42947367-42947386 MS.gene96525:CDS 65.0%
GCGAGGCGGCAAGGAAGAGC+CGG + chr5.1:42947954-42947973 MS.gene96525:CDS 70.0%


Chromosome Type Strat End Strand Name
chr5.1 gene 42946242 42949679 42946242 ID=MS.gene96525
chr5.1 mRNA 42946242 42949679 42946242 ID=MS.gene96525.t1;Parent=MS.gene96525
chr5.1 exon 42946242 42946306 42946242 ID=MS.gene96525.t1.exon1;Parent=MS.gene96525.t1
chr5.1 CDS 42946242 42946306 42946242 ID=cds.MS.gene96525.t1;Parent=MS.gene96525.t1
chr5.1 exon 42946391 42946494 42946391 ID=MS.gene96525.t1.exon2;Parent=MS.gene96525.t1
chr5.1 CDS 42946391 42946494 42946391 ID=cds.MS.gene96525.t1;Parent=MS.gene96525.t1
chr5.1 exon 42946585 42946664 42946585 ID=MS.gene96525.t1.exon3;Parent=MS.gene96525.t1
chr5.1 CDS 42946585 42946664 42946585 ID=cds.MS.gene96525.t1;Parent=MS.gene96525.t1
chr5.1 exon 42947337 42947558 42947337 ID=MS.gene96525.t1.exon4;Parent=MS.gene96525.t1
chr5.1 CDS 42947337 42947558 42947337 ID=cds.MS.gene96525.t1;Parent=MS.gene96525.t1
chr5.1 exon 42947786 42947845 42947786 ID=MS.gene96525.t1.exon5;Parent=MS.gene96525.t1
chr5.1 CDS 42947786 42947845 42947786 ID=cds.MS.gene96525.t1;Parent=MS.gene96525.t1
chr5.1 exon 42947929 42947988 42947929 ID=MS.gene96525.t1.exon6;Parent=MS.gene96525.t1
chr5.1 CDS 42947929 42947988 42947929 ID=cds.MS.gene96525.t1;Parent=MS.gene96525.t1
chr5.1 exon 42948120 42948197 42948120 ID=MS.gene96525.t1.exon7;Parent=MS.gene96525.t1
chr5.1 CDS 42948120 42948197 42948120 ID=cds.MS.gene96525.t1;Parent=MS.gene96525.t1
chr5.1 exon 42948286 42948337 42948286 ID=MS.gene96525.t1.exon8;Parent=MS.gene96525.t1
chr5.1 CDS 42948286 42948337 42948286 ID=cds.MS.gene96525.t1;Parent=MS.gene96525.t1
chr5.1 exon 42948490 42948761 42948490 ID=MS.gene96525.t1.exon9;Parent=MS.gene96525.t1
chr5.1 CDS 42948490 42948761 42948490 ID=cds.MS.gene96525.t1;Parent=MS.gene96525.t1
chr5.1 exon 42949031 42949279 42949031 ID=MS.gene96525.t1.exon10;Parent=MS.gene96525.t1
chr5.1 CDS 42949031 42949279 42949031 ID=cds.MS.gene96525.t1;Parent=MS.gene96525.t1
chr5.1 exon 42949533 42949679 42949533 ID=MS.gene96525.t1.exon11;Parent=MS.gene96525.t1
chr5.1 CDS 42949533 42949679 42949533 ID=cds.MS.gene96525.t1;Parent=MS.gene96525.t1
Gene Sequence

>MS.gene96525

ATGCAAAGCTTCAAAACAGCTCAATCAAACTCTCAACTCTATTGCCACCAACCCTTCTTGCTTAGGTATGTTTGTCTTGTGTTTTTGTTTTTGCTTTCTCTAGTGATAAAAATGGTTCATGCTGTTTTGGTTTTTGATGAAACAAACAGAGGAGAAGACATAAACAGAAACACAATGCGTTTTTCTGATATTGGAGACTTTCATCATTCATCTCCTTTCTTTCCACAACAAGATGCTGTTGATTTAACTTCAAGTAACTTTCTCTTCTTTTACATGTTTTGGTATAGAAAAACTATATAGTATAATTTTATTTATTTCTAATTTAAACTGTTTTTTTGTGCAGGTTGTATGTTTAGTAGTGTAAAGTCGAACAATATTGTTATTGGTGGTAGTAACATGCAGTATGGGACAACAATTAACATGGTTCATCATCTTCTTTTCTCTCTTTGCTTTTTAGTCCTAACATAATTTTATTTTAGTCCCTGTGAAAAAATGCAACATAATTAAATTTCTGAGAAAGAATTGTCCACAAATTGTTCTTTAGAATCATTAACTCTTACACTTTAGGCGCTACAGGCGCTACCTCGGTGAAAAGAGTTTAACATTGTAACCTCAAAGTATAGTGTTCAAAATTCAAATTCCCTCTGAGACGGTTGTAAAATGATTATTAGTGTAACACTAGGAAGAATTTATCTTGATTCTGTAATTTTCATGAGGTGAAAAAACAACCTCTTGAGTAAAAAACAGGGTAAGACTGCGTACAATACACCAAATAGTGGGACCCCTTCCCGGACCCTGCGTATGCAGGAGCTTTAGTGTACCAGGTTGCCCTGTAATTTTAATGAGGTTAGCTCAGTTATTAGAGCTTGGCCTTGTAAGCCGAGGGAGTGATGTTCAAATCCCTCTCGGAGATAGTTGTAAAATGATCATATAATACCACTTTATTAATTAATAATAATTTCTCCTTCCCTAATTTTATCAAAAAAATGGACTTAATAAACTGGGTTTTGCAATTTTTAGTCACCCTAGCAAGTAATAGTTTATCCTTATGTTGTTTGTTTTGCATCTGATCAAGCTTTATTTGTGTTTTCATAGAATGTTGGGTCTGCAGAGATTACTTCAAATGGTGCAGGGTGTTCGGATGCAGGGCTGCAGCAGCAGCAGCAGCAACTGATGTACAACAAGGGAATAGCTTCCTTGCCTTTGGGAAATTGTCATGTTGAGAATTGGGCTGATTCTGGTGTGGCTGATAATAATAGCCAACAGACTGATGATACTTCCACTGATATTGATATCGATACCGATGATAAACACCAAGTGAGTTACCTCTCCATTTCTCATACATGTTTTGCTTTTTACAGATTTCATTACCGATACAAACAATACAATTGAATATTATGTTATGCGAGATTAATTGTCTGTTTTGAACCATCTTGAATTGAGATACACAAGTATCTTTTTGATATTTTGTGAAGATGTTTCTTTTAGATGAGTTGTGTGTGTTTTGCTGACATCTGATGGCGTTTTTTTTAACTTTATGTTAGTCCAATAAAGGAAACGGTCACTCTAATAATCAGACCAAGTTCAGAGCTGAAGATCACAAGGTTTTTGTTCTTGATTATTTCTTTGCTCTAACATGTATTAACATTTTTAATCTAGTTCCTGATTTGGATGCTCTTTTTTCTAGACCCTTCGCAGACTTGCTCAGAATCGCGAGGCGGCAAGGAAGAGCCGGTTACGGAAGAAGGTAAATGGTCTCGATGGAAATATGGGATTACCTTTTGCATATGTATCTATATTTTTGTTGTAGACCAAGGGGTTACTGAATTCAAAGGATAGTTAAGCTTTAATGATATATACGGATGTTGGTTTTAATAGGCATATGTACAACAGCTGGAGAGCAGTCGAGTCAAGCTTATGCAATTAGAGCAAGAGCTTCAACGAGTACGTCAACAGGTGCATCAAGTTGTTGATTTCTATTTCCAGTTGATGTTTATGTACAATCTGGTTTTTTTTTTCCTCATGGTTGTGAATTTTAATGCAGGGCATGTTTATTGCAAATCCAGGAGATCAAGGTCATTCTTCTGTTGGAAATGGTAATGAAAATGCTATTTCATGTGATGCATGTATATTTATTTGTGTGTGAATAAAGCATGATGCATATATTAGTAACATATACATCAATGTACAACTAAATGATTCTTGTATTACCCCCACCGTGTTGTGATAATGTTTATTGATCATTCAGGTGCTCTAGCATTTGACATGGAATACGCCCATTGGGTTGACGAGCATCAACGTATGCTCAATGATCTAAGATCGGCGTTAAATTCTCAAATGGGCGATAATGAATTGCATCTGCTTGTCGATGGTGTTATGGCACATCATAATGAGTTATTTAGATTAAAGAGCATAGGGGCAAAGACCGATGTATTTCACATGCTCTATGGGTTGTGGAAGACACCAGTAGAAAGATTTTTTATTTGGCATGGTGCATTCCGTTCATCTGAAATTCTCAAGGTGACTGACCAATTCATAGTGTGTTTTTTAATTGGAGAATGAGGAAATTATTATTAATTAAATTGACATTAACGATTATTTTACAACTGTTTCGAGAAATTTTAGACCTTTTCCCTTGTGTTATAAAGTCAAGCTCTTATTGATGAGCTGTCACCTCATAGTCAATTCAACAGTACTTCATTTGCAAGTAACTTGATCACTTGCGTAGAACCATATAATTAATTATTCTTAATTTGTTGATTCTCATATTTGTTTCGTTTATAATTCAGATAGTAAAGAACCACCTCGAGCCGTTAACTGAAAATCAGTTGATGGGAATTTGTAGTCTTCAGCAGTCTACTCAGCAGGCTGAGGATGCTTTATCTCACGGCATGGAAGTATTGAAACAATCTCTTTTAGAGATACTTTCCTCCACACCCTCAGTATCCGGTACAGGTTCCGGAAATGTATCTGATTACATGGGCCAGATGGCATTTGCAATGAACAAGCTTGCACTCCTGGAGGATTTCCTTCACAAGGTAAAATAGATATGCAGTTAATCTTTCTATGCTAAGGGAGCTAAATTTTATTATCTCGTAATCTCTTATACCTTGATGAATGTGAAAAATAGACATATGATGTTCAAACCCTAAGTTACCGTCTTCATGTGAATTTTTTGTTTCATCGTATTCCTACTCCAGTATGACCTTCCCTTCTTCGCCAAGTAGTTCAAACACATGGTTTTATCATTTTCAAAAAGTTTATAAGTATTGTTGTCATGCTTGTTTTTAGGCTGACCTCTTGAAGCAAGAAACTCTGCAACAGTTGCAAAGAATTTTGACGACACGTCAGACTGCAAGGGCTCTCCTTGTCAGAAATGATTACATTTCAAGACTACGAGCACTTAGTTCGTTATGGTTGGCACGCCCAAGGGAGTAG
Protein sequence

>MS.gene96525.t1

MQSFKTAQSNSQLYCHQPFLLRGEDINRNTMRFSDIGDFHHSSPFFPQQDAVDLTSSCMFSSVKSNNIVIGGSNMQYGTTINMNVGSAEITSNGAGCSDAGLQQQQQQLMYNKGIASLPLGNCHVENWADSGVADNNSQQTDDTSTDIDIDTDDKHQSNKGNGHSNNQTKFRAEDHKTLRRLAQNREAARKSRLRKKAYVQQLESSRVKLMQLEQELQRVRQQGMFIANPGDQGHSSVGNGALAFDMEYAHWVDEHQRMLNDLRSALNSQMGDNELHLLVDGVMAHHNELFRLKSIGAKTDVFHMLYGLWKTPVERFFIWHGAFRSSEILKIVKNHLEPLTENQLMGICSLQQSTQQAEDALSHGMEVLKQSLLEILSSTPSVSGTGSGNVSDYMGQMAFAMNKLALLEDFLHKADLLKQETLQQLQRILTTRQTARALLVRNDYISRLRALSSLWLARPRE