AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene96587

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene96587.t1 MTR_3g006010 73.346 529 81 2 1 529 1 469 0.0 750
MS.gene96587.t1 MTR_3g006120 95.170 352 17 0 178 529 1 352 0.0 698
MS.gene96587.t1 MTR_3g006100 92.550 349 26 0 178 526 1 349 0.0 677
MS.gene96587.t1 MTR_3g006180 92.899 338 24 0 191 528 1 338 0.0 654
MS.gene96587.t1 MTR_3g006140 72.934 351 95 0 174 524 19 369 0.0 540
MS.gene96587.t1 MTR_4g133490 70.520 346 90 2 186 526 7 345 1.84e-166 475
MS.gene96587.t1 MTR_6g091830 51.885 451 189 9 101 529 11 455 1.01e-152 444
MS.gene96587.t1 MTR_6g092140 51.663 451 190 9 101 529 11 455 2.06e-151 441
MS.gene96587.t1 MTR_4g133320 70.684 307 86 2 221 526 2 305 3.07e-144 417
MS.gene96587.t1 MTR_7g083950 53.103 435 180 10 101 529 16 432 2.49e-136 402
MS.gene96587.t1 MTR_3g068220 58.611 360 132 4 178 526 1 354 3.92e-136 399
MS.gene96587.t1 MTR_7g070100 58.092 346 141 4 185 529 8 350 1.68e-127 376
MS.gene96587.t1 MTR_3g045700 56.180 356 146 5 178 529 1 350 5.65e-127 375
MS.gene96587.t1 MTR_6g088340 46.405 459 182 9 97 529 13 433 3.34e-124 371
MS.gene96587.t1 MTR_3g006185 97.143 175 5 0 1 175 1 175 4.06e-119 348
MS.gene96587.t1 MTR_3g006105 89.143 175 18 1 1 174 1 175 1.52e-103 308
MS.gene96587.t1 MTR_1g100280 49.859 355 142 6 181 529 13 337 2.68e-103 314
MS.gene96587.t1 MTR_6g011110 56.272 279 110 3 260 529 2 277 1.11e-97 297
MS.gene96587.t1 MTR_3g006125 89.205 176 18 1 1 175 82 257 3.56e-96 292
MS.gene96587.t1 MTR_1g109340 60.079 253 93 3 280 528 106 354 1.70e-93 289
MS.gene96587.t1 MTR_3g085910 47.664 321 109 6 183 493 5 276 1.01e-89 276
MS.gene96587.t1 MTR_3g086480 56.641 256 105 4 267 521 3 253 9.72e-84 260
MS.gene96587.t1 MTR_3g006065 57.812 192 72 3 1 192 1 183 9.71e-62 201
MS.gene96587.t1 MTR_3g006150 63.415 164 52 2 1 164 1 156 8.33e-59 192
MS.gene96587.t1 MTR_3g006150 46.250 80 39 1 98 177 8 83 7.03e-12 64.3
MS.gene96587.t1 MTR_1g109520 59.494 158 60 1 375 528 19 176 1.10e-55 185
MS.gene96587.t1 MTR_1g089620 60.448 134 50 1 352 485 30 160 1.33e-45 162
MS.gene96587.t1 MTR_1g089085 54.362 149 63 3 173 320 31 175 1.09e-44 155
MS.gene96587.t1 MTR_1g012330 63.504 137 50 0 260 396 2 138 2.81e-44 157
MS.gene96587.t1 MTR_1g109090 50.000 134 66 1 173 305 8 141 7.71e-36 131
MS.gene96587.t1 MTR_1g106050 59.813 107 41 1 181 285 2 108 1.40e-34 127
MS.gene96587.t1 MTR_1g104960 45.679 162 83 4 6 167 11 167 1.77e-31 120
MS.gene96587.t1 MTR_4g133300 44.886 176 89 4 2 177 83 250 6.26e-30 118
MS.gene96587.t1 MTR_4g133300 42.953 149 75 3 25 173 25 163 1.40e-25 105
MS.gene96587.t1 MTR_4g133470 44.886 176 89 4 2 177 83 250 7.56e-30 117
MS.gene96587.t1 MTR_4g133470 41.611 149 77 3 25 173 25 163 9.45e-24 100
MS.gene96587.t1 MTR_1g105955 42.767 159 79 2 9 167 17 163 2.56e-28 111
MS.gene96587.t1 MTR_1g105955 49.275 69 34 1 8 76 95 162 6.86e-11 62.0
MS.gene96587.t1 MTR_6g023220 27.243 301 211 6 186 484 18 312 9.96e-27 111
MS.gene96587.t1 MTR_1g093300 53.398 103 48 0 353 455 1 103 1.56e-26 105
MS.gene96587.t1 MTR_8g062700 43.750 160 85 3 2 161 36 190 7.65e-26 112
MS.gene96587.t1 MTR_8g062700 38.235 136 65 2 91 226 35 151 1.09e-18 90.5
MS.gene96587.t1 MTR_8g062700 43.750 160 85 3 2 161 36 190 7.79e-26 112
MS.gene96587.t1 MTR_8g062700 38.235 136 65 2 91 226 35 151 1.05e-18 90.5
MS.gene96587.t1 MTR_0128s0040 42.105 133 75 2 210 342 3 133 4.71e-25 100
MS.gene96587.t1 MTR_6g091850 43.564 101 51 2 435 529 1 101 7.41e-24 96.3
MS.gene96587.t1 MTR_1g104980 38.462 169 81 5 23 191 13 158 7.69e-24 99.0
MS.gene96587.t1 MTR_6g008995 39.752 161 88 4 2 161 31 183 1.64e-21 97.8
MS.gene96587.t1 MTR_6g008995 34.586 133 66 3 94 226 33 144 6.03e-13 71.2
MS.gene96587.t1 MTR_7g013380 35.542 166 100 3 8 171 99 259 2.45e-21 95.1
MS.gene96587.t1 MTR_7g013380 35.870 184 107 4 2 179 7 185 4.83e-20 91.3
MS.gene96587.t1 MTR_7g013380 40.698 86 50 1 8 92 185 270 3.63e-12 67.8
MS.gene96587.t1 MTR_5g036670 39.130 161 93 3 2 162 37 192 3.21e-21 98.6
MS.gene96587.t1 MTR_5g036670 54.054 74 33 1 94 167 39 111 5.70e-16 82.0
MS.gene96587.t1 MTR_6g008970 39.752 161 90 4 2 161 57 211 8.97e-21 97.1
MS.gene96587.t1 MTR_6g008970 48.649 74 37 1 94 167 59 131 1.36e-13 74.3
MS.gene96587.t1 MTR_1g104940 47.664 107 43 2 5 98 9 115 1.27e-20 87.8
MS.gene96587.t1 MTR_1g104940 43.750 80 44 1 98 177 14 92 1.52e-11 62.0
MS.gene96587.t1 MTR_1g104937 50.538 93 41 2 6 98 10 97 8.20e-18 79.7
MS.gene96587.t1 MTR_1g109550 37.762 143 74 3 7 149 15 142 9.93e-17 77.4
MS.gene96587.t1 MTR_1g109550 41.250 80 45 1 98 177 16 93 3.83e-12 64.3
MS.gene96587.t1 MTR_6g008995 37.324 142 80 4 31 171 2 135 2.94e-16 81.3
MS.gene96587.t1 MTR_8g062350 33.668 199 88 6 2 161 8 201 4.82e-15 74.3
MS.gene96587.t1 MTR_8g062350 42.857 98 53 2 91 188 7 101 3.04e-14 72.0
MS.gene96587.t1 MTR_1g105960 40.476 126 44 3 9 134 2 96 7.41e-15 71.2
MS.gene96587.t1 MTR_1g105960 50.000 78 38 1 99 176 2 78 9.27e-15 70.9
MS.gene96587.t1 MTR_7g013410 33.813 139 83 2 23 161 12 141 9.11e-15 72.0
MS.gene96587.t1 MTR_1g105010 36.752 117 73 1 84 200 2 117 2.97e-13 67.0
MS.gene96587.t1 MTR_3g006000 51.515 66 31 1 106 170 14 79 8.33e-13 64.3
MS.gene96587.t1 MTR_2g097830 40.426 94 47 1 25 118 83 167 1.05e-12 66.6
MS.gene96587.t1 MTR_1g104950 41.573 89 44 2 32 120 1 81 2.30e-12 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene96587.t1 AT3G01320 41.875 160 87 3 2 161 51 204 1.14e-22 103
MS.gene96587.t1 AT3G01320 50.000 74 36 1 94 167 53 125 3.06e-14 76.6
MS.gene96587.t1 AT3G01320 41.875 160 87 3 2 161 51 204 1.17e-22 103
MS.gene96587.t1 AT3G01320 50.000 74 36 1 94 167 53 125 3.12e-14 76.6
MS.gene96587.t1 AT1G70030 38.889 162 88 4 2 161 5 157 7.78e-22 92.8
MS.gene96587.t1 AT1G70060 39.375 160 93 3 2 161 8 163 3.53e-21 98.6
MS.gene96587.t1 AT1G70060 49.351 77 38 1 91 167 7 82 2.26e-14 77.0
MS.gene96587.t1 AT1G70060 39.375 160 93 3 2 161 8 163 3.53e-21 98.6
MS.gene96587.t1 AT1G70060 49.351 77 38 1 91 167 7 82 2.26e-14 77.0
MS.gene96587.t1 AT5G15020 36.723 177 105 3 2 178 46 215 1.33e-20 96.7
MS.gene96587.t1 AT5G15020 36.723 177 105 3 2 178 46 215 1.46e-20 96.7
MS.gene96587.t1 AT1G24190 36.875 160 96 3 2 161 8 162 1.73e-20 96.3
MS.gene96587.t1 AT1G24190 43.182 88 42 2 91 171 7 93 8.10e-14 75.1
MS.gene96587.t1 AT1G24190 36.875 160 96 3 2 161 8 162 1.75e-20 96.3
MS.gene96587.t1 AT1G24190 43.182 88 42 2 91 171 7 93 8.53e-14 75.1
MS.gene96587.t1 AT1G24190 36.875 160 96 3 2 161 8 162 1.82e-20 96.3
MS.gene96587.t1 AT1G24190 43.182 88 42 2 91 171 7 93 8.55e-14 75.1
MS.gene96587.t1 AT1G24230 32.941 170 93 3 5 173 11 160 2.33e-19 88.2
MS.gene96587.t1 AT1G24230 29.333 150 98 2 8 157 86 227 9.18e-12 65.9
MS.gene96587.t1 AT1G10450 37.576 165 94 4 8 171 84 240 9.90e-19 90.9
MS.gene96587.t1 AT1G10450 44.444 90 42 2 96 178 82 170 1.00e-13 74.7
MS.gene96587.t1 AT1G10450 37.576 165 94 4 8 171 33 189 1.20e-18 90.5
MS.gene96587.t1 AT1G10450 44.444 90 42 2 96 178 31 119 9.63e-14 74.7
MS.gene96587.t1 AT1G10450 37.576 165 94 4 8 171 33 189 1.20e-18 90.5
MS.gene96587.t1 AT1G10450 44.444 90 42 2 96 178 31 119 9.63e-14 74.7
MS.gene96587.t1 AT1G24250 30.667 150 87 2 27 160 33 181 8.95e-18 83.6
MS.gene96587.t1 AT1G24200 35.220 159 95 3 3 161 9 159 2.35e-17 80.9
MS.gene96587.t1 AT1G24200 45.455 99 43 3 91 181 7 102 4.47e-14 71.6
MS.gene96587.t1 AT1G59890 37.013 154 90 3 8 161 45 191 4.91e-17 85.5
MS.gene96587.t1 AT1G59890 54.286 70 31 1 98 167 45 113 6.10e-15 78.6
MS.gene96587.t1 AT1G59890 37.013 154 90 3 8 161 45 191 4.96e-17 85.5
MS.gene96587.t1 AT1G59890 54.286 70 31 1 98 167 45 113 6.11e-15 78.6
MS.gene96587.t1 AT1G59890 37.013 154 90 3 8 161 45 191 5.21e-17 85.1
MS.gene96587.t1 AT1G59890 54.286 70 31 1 98 167 45 113 6.09e-15 78.6
MS.gene96587.t1 AT1G59890 37.013 154 90 3 8 161 45 191 5.68e-17 85.1
MS.gene96587.t1 AT1G59890 54.286 70 31 1 98 167 45 113 6.81e-15 78.6
MS.gene96587.t1 AT5G15025 55.405 74 32 1 94 167 43 115 1.44e-16 76.6
MS.gene96587.t1 AT5G15025 47.059 85 39 2 4 88 43 121 9.99e-12 62.8
MS.gene96587.t1 AT1G23810 29.814 161 107 2 5 160 11 170 4.88e-15 75.5
MS.gene96587.t1 AT1G70030 42.609 115 55 4 2 114 16 121 7.76e-15 71.6
MS.gene96587.t1 AT1G70030 35.802 162 61 5 2 161 16 136 1.05e-14 71.6
MS.gene96587.t1 AT1G27260 32.680 153 100 3 9 160 4 154 6.51e-14 71.6
MS.gene96587.t1 AT1G27220 43.750 80 44 1 98 177 14 92 4.39e-13 68.2
MS.gene96587.t1 AT4G12020 45.946 74 38 1 94 167 304 375 3.68e-11 66.6
MS.gene96587.t1 AT4G12020 45.570 79 39 2 91 167 299 375 3.78e-11 66.6
MS.gene96587.t1 AT4G12020 45.570 79 39 2 91 167 299 375 3.84e-11 66.6
MS.gene96587.t1 AT4G12020 45.570 79 39 2 91 167 299 375 3.85e-11 66.6
MS.gene96587.t1 AT1G27250 47.692 65 33 1 98 162 21 84 3.94e-11 61.2
MS.gene96587.t1 AT4G12020 45.570 79 39 2 91 167 299 375 4.01e-11 66.6
MS.gene96587.t1 AT4G12020 45.570 79 39 2 91 167 299 375 4.01e-11 66.6
MS.gene96587.t1 AT4G12020 45.570 79 39 2 91 167 299 375 4.02e-11 66.6
MS.gene96587.t1 AT4G12020 45.570 79 39 2 91 167 299 375 4.09e-11 66.6
MS.gene96587.t1 AT4G12020 45.570 79 39 2 91 167 299 375 4.09e-11 66.6
MS.gene96587.t1 AT4G12020 45.570 79 39 2 91 167 299 375 4.12e-11 66.6
MS.gene96587.t1 AT4G12020 45.570 79 39 2 91 167 232 308 4.43e-11 66.6

Find 102 sgRNAs with CRISPR-Local

Find 184 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGGGCATACGGATTTAATTT+TGG 0.145300 3.3:-1800287 MS.gene96587:CDS
ACCTTCTTTCTTCTTGTAAA+TGG 0.145840 3.3:+1798702 None:intergenic
TGTCTATCAGTCTGGAAATT+TGG 0.158326 3.3:-1798556 MS.gene96587:CDS
TTCTGGCACGTTGCTTATTC+TGG 0.158749 3.3:-1798783 MS.gene96587:CDS
GGGAATTTCATAAAACTTAT+TGG 0.162427 3.3:-1798926 MS.gene96587:CDS
ATAAGAAGAATTGACTTTAA+AGG 0.192960 3.3:+1798665 None:intergenic
CTATCATGCTTAATGTATTT+TGG 0.196702 3.3:+1798093 None:intergenic
TTTGAATAAGTAATGGTTCT+TGG 0.234598 3.3:+1798886 None:intergenic
TACCATGTCTTGCTTGCTTT+TGG 0.255664 3.3:-1798636 MS.gene96587:CDS
AAGATGGTTGTAAAATTTCT+TGG 0.292218 3.3:-1799025 MS.gene96587:CDS
TTCCATCTTGACAAAATTCA+TGG 0.296900 3.3:+1798269 None:intergenic
ATTTCGAAATTAAATCTTCA+TGG 0.307910 3.3:+1800554 None:intergenic
ACAACATGTAAAGTGTGTTT+AGG 0.310726 3.3:-1798132 MS.gene96587:CDS
GTCTATCAGTCTGGAAATTT+GGG 0.319305 3.3:-1798555 MS.gene96587:CDS
CTTTCAAAACCCCACCTTCT+CGG 0.331626 3.3:+1798186 None:intergenic
CAACATGTAAAGTGTGTTTA+GGG 0.332853 3.3:-1798131 MS.gene96587:CDS
GTCGCTTCATGTAAAAGTTC+TGG 0.337852 3.3:-1798588 MS.gene96587:CDS
GGTGTGATTCGATATTTCTT+TGG 0.344227 3.3:+1800247 None:intergenic
AAAGGAAAACGCCTACTTGC+TGG 0.351938 3.3:-1798055 MS.gene96587:CDS
ATCAGTCTGGAAATTTGGGC+TGG 0.359141 3.3:-1798551 MS.gene96587:CDS
CCAAGGCGATCAATCAATTC+TGG 0.360139 3.3:-1798800 MS.gene96587:CDS
ACAAATTATGAAGGATTTCA+AGG 0.367445 3.3:-1800632 MS.gene96587:CDS
GTAGGTTTGGATTTGAGAAA+AGG 0.371809 3.3:-1800675 MS.gene96587:CDS
ATTAAGAGTGTACGAGTTGT+TGG 0.382597 3.3:-1800581 MS.gene96587:CDS
TAACCGGTGTCAAGCTGAAC+TGG 0.385684 3.3:+1800223 None:intergenic
TACACCTATGTTGGCCTTGT+CGG 0.389440 3.3:+1798452 None:intergenic
AGATGGTTGTAAAATTTCTT+GGG 0.404155 3.3:-1799024 MS.gene96587:CDS
GCAGCAGTTAAACGTAGGTT+TGG 0.408891 3.3:-1800688 MS.gene96587:CDS
TTTCAAAACCCCACCTTCTC+GGG 0.416348 3.3:+1798187 None:intergenic
CAATAACCAGATTACTCAAC+TGG 0.422972 3.3:+1797991 None:intergenic
GATGACCTCTTTCAATTCGC+TGG 0.428564 3.3:-1798966 MS.gene96587:CDS
AAAGTAAAAGATGTGTTTCA+TGG 0.431621 3.3:-1800415 MS.gene96587:CDS
TAGGTTTGGATTTGAGAAAA+GGG 0.438311 3.3:-1800674 MS.gene96587:CDS
TAAACACACTTTACATGTTG+TGG 0.439177 3.3:+1798134 None:intergenic
AGCGGATATTTGATCATGAC+AGG 0.440460 3.3:-1798753 MS.gene96587:CDS
ATTGTTAAGGATTTCAAGGC+TGG 0.451018 3.3:-1800358 MS.gene96587:CDS
GTCATCGAAATCTAGATCTC+TGG 0.451722 3.3:+1798983 None:intergenic
TCGATATTTCTTTGGCAAGA+AGG 0.460534 3.3:+1800255 None:intergenic
TCGCTGGTGTGTGCAAGAAT+TGG 0.467150 3.3:-1798950 MS.gene96587:CDS
TTTGTCAAGATGGAAACTTT+GGG 0.468280 3.3:-1798261 MS.gene96587:CDS
AGGAAAAGGATTTCTTATCA+TGG 0.468556 3.3:+1798856 None:intergenic
AGTTTGTATGTCTATCAGTC+TGG 0.474620 3.3:-1798564 MS.gene96587:CDS
AAAACGCCTACTTGCTGGAT+TGG 0.477038 3.3:-1798050 MS.gene96587:CDS
GGAAAAGGATTTCTTATCAT+GGG 0.491468 3.3:+1798857 None:intergenic
CTCAGGATGGTTAGTTGTGA+TGG 0.492017 3.3:-1798357 MS.gene96587:CDS
ATATGAAATCAAACTTCCAT+TGG 0.495726 3.3:-1800509 MS.gene96587:CDS
TCCATTTACAAGAAGAAAGA+AGG 0.500617 3.3:-1798703 MS.gene96587:CDS
TCGGTCAGCTATGCTGATGA+AGG 0.509137 3.3:+1798836 None:intergenic
TCATCGTCGTCACGATCCAA+TGG 0.515446 3.3:+1800493 None:intergenic
AGAGGGAATGATCTGCTTCA+AGG 0.517258 3.3:-1800307 MS.gene96587:CDS
TCAGTCTGGAAATTTGGGCT+GGG 0.521625 3.3:-1798550 MS.gene96587:CDS
CCAGAATTGATTGATCGCCT+TGG 0.527310 3.3:+1798800 None:intergenic
GTAAACATTCAATATTTCCT+CGG 0.528220 3.3:+1798308 None:intergenic
AGCTATGCTGATGAAGGAAA+AGG 0.531287 3.3:+1798842 None:intergenic
GGCTGAAAGAATTGATGCTA+GGG 0.533185 3.3:-1800611 MS.gene96587:CDS
ACAAAGTCAACAACCTTCCA+TGG 0.536142 3.3:+1798504 None:intergenic
TAACATCTACCTCACTCCTC+AGG 0.540088 3.3:-1798374 MS.gene96587:CDS
AGGCTGAAAGAATTGATGCT+AGG 0.540112 3.3:-1800612 MS.gene96587:CDS
GAGGGAATGATCTGCTTCAA+GGG 0.542159 3.3:-1800306 MS.gene96587:CDS
TGTTGTGGATGAAAGATTGA+TGG 0.544678 3.3:+1798149 None:intergenic
AGTTTGATTTCATATTCAGT+TGG 0.545841 3.3:+1800517 None:intergenic
AGTGATTCATATTGCTTCCG+AGG 0.546777 3.3:-1798325 MS.gene96587:CDS
CAAGTCAAGTACACCTATGT+TGG 0.548742 3.3:+1798443 None:intergenic
ATTCAACAATGGAAAGTCCA+TGG 0.553899 3.3:-1798521 MS.gene96587:CDS
TGATCTGCTTCAAGGGCATA+CGG 0.554583 3.3:-1800299 MS.gene96587:CDS
ATAAGTGTTGCTGCGGCAAG+AGG 0.559399 3.3:-1800325 MS.gene96587:CDS
GCTTATTCTGGCTGTTCTAG+CGG 0.565805 3.3:-1798771 MS.gene96587:CDS
CATTGAGCAACCCGAGAAGG+TGG 0.569290 3.3:-1798197 MS.gene96587:CDS
TGTGTTTCATGGTAAGAATG+AGG 0.572647 3.3:-1800404 MS.gene96587:CDS
AACAATGGAAAGTCCATGGA+AGG 0.572932 3.3:-1798517 MS.gene96587:CDS
AAGATGAAGAAGCTCTCAGT+TGG 0.573928 3.3:-1800730 MS.gene96587:CDS
ACACACCAGCGAATTGAAAG+AGG 0.578254 3.3:+1798961 None:intergenic
AGTGAGGTAGATGTTACATC+GGG 0.579813 3.3:+1798381 None:intergenic
ATGCATTGAGCAACCCGAGA+AGG 0.585187 3.3:-1798200 MS.gene96587:CDS
GACGATGATGACGAACTACA+AGG 0.589561 3.3:-1800478 MS.gene96587:CDS
GCAATGAATAACATACAAGA+TGG 0.590425 3.3:-1799041 MS.gene96587:CDS
CTTTAGACATCTACACTATG+AGG 0.594856 3.3:-1798025 MS.gene96587:CDS
CTGGTGTGTGCAAGAATTGG+AGG 0.595567 3.3:-1798947 MS.gene96587:CDS
TAAGTGTTGCTGCGGCAAGA+GGG 0.604842 3.3:-1800324 MS.gene96587:CDS
TGCCAAAAGCAAGCAAGACA+TGG 0.610086 3.3:+1798634 None:intergenic
GAGTGAGGTAGATGTTACAT+CGG 0.616275 3.3:+1798380 None:intergenic
ATTGAGCAACCCGAGAAGGT+GGG 0.616952 3.3:-1798196 MS.gene96587:CDS
CCGAAAAGTTTATCACTCCA+AGG 0.620313 3.3:-1798817 MS.gene96587:CDS
AAAGCACCAATCCAGCAAGT+AGG 0.620337 3.3:+1798044 None:intergenic
TTGAGCAACCCGAGAAGGTG+GGG 0.622323 3.3:-1798195 MS.gene96587:CDS
CTGGGTTACATATTCAACAA+TGG 0.624667 3.3:-1798532 MS.gene96587:CDS
AGAGTGTACGAGTTGTTGGA+CGG 0.625456 3.3:-1800577 MS.gene96587:CDS
CCTCCAGTTCAGCTTGACAC+CGG 0.627356 3.3:-1800226 MS.gene96587:intron
GTCACCGACAAGGCCAACAT+AGG 0.627828 3.3:-1798456 MS.gene96587:CDS
ATCTACCTCACTCCTCAGGA+TGG 0.644112 3.3:-1798370 MS.gene96587:CDS
AATTGATATAAGTGTTGCTG+CGG 0.644511 3.3:-1800332 MS.gene96587:CDS
TAGAACTCGAGTTCCTCCAA+AGG 0.651017 3.3:-1798073 MS.gene96587:CDS
TAGACATCTACACTATGAGG+TGG 0.658182 3.3:-1798022 MS.gene96587:CDS
TATATACGTTGTCACCGACA+AGG 0.661708 3.3:-1798466 MS.gene96587:CDS
CCGGTGTCAAGCTGAACTGG+AGG 0.668666 3.3:+1800226 None:intergenic
TACTCGCAGCAGTTAAACGT+AGG 0.669963 3.3:-1800693 MS.gene96587:CDS
ACTAACCATCCTGAGGAGTG+AGG 0.672997 3.3:+1798365 None:intergenic
GCGGATATTTGATCATGACA+GGG 0.678093 3.3:-1798752 MS.gene96587:CDS
TGGTGTGTGCAAGAATTGGA+GGG 0.700448 3.3:-1798946 MS.gene96587:CDS
AACATGTAAAGTGTGTTTAG+GGG 0.701783 3.3:-1798130 MS.gene96587:CDS
CGGATATTTGATCATGACAG+GGG 0.702309 3.3:-1798751 MS.gene96587:CDS
CATCACAACTAACCATCCTG+AGG 0.720834 3.3:+1798358 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATAAATATATAAATAA+TGG + chr3.3:1798540-1798559 None:intergenic 0.0%
!! AAAAAAAAAAACATATCTTT+CGG - chr3.3:1799600-1799619 MS.gene96587:intron 10.0%
!! ATAAATATATAAATAATGGT+AGG + chr3.3:1798536-1798555 None:intergenic 10.0%
!!! TGAGTTTTTAAAAATTGTTA+AGG - chr3.3:1798358-1798377 MS.gene96587:CDS 15.0%
!!! TTCTAAAAATTTTATATCTG+TGG + chr3.3:1800316-1800335 None:intergenic 15.0%
!! AAAAATTGTTAAGGATTTCA+AGG - chr3.3:1798367-1798386 MS.gene96587:CDS 20.0%
!! ATTTCGAAATTAAATCTTCA+TGG + chr3.3:1798178-1798197 None:intergenic 20.0%
!! GCTATAAAGATTCAATAAAT+TGG - chr3.3:1798576-1798595 MS.gene96587:CDS 20.0%
!!! ATAAGAAGAATTGACTTTAA+AGG + chr3.3:1800067-1800086 None:intergenic 20.0%
!!! ATCTTTTCTACAAATTATGA+AGG - chr3.3:1798088-1798107 MS.gene96587:CDS 20.0%
! AAAGTAAAAGATGTGTTTCA+TGG - chr3.3:1798314-1798333 MS.gene96587:CDS 25.0%
! AACTTATTGGAAAAAGTTCT+TGG - chr3.3:1799816-1799835 MS.gene96587:intron 25.0%
! AAGATGGTTGTAAAATTTCT+TGG - chr3.3:1799704-1799723 MS.gene96587:intron 25.0%
! ACAAATTATGAAGGATTTCA+AGG - chr3.3:1798097-1798116 MS.gene96587:CDS 25.0%
! AGATGGTTGTAAAATTTCTT+GGG - chr3.3:1799705-1799724 MS.gene96587:intron 25.0%
! ATATGAAATCAAACTTCCAT+TGG - chr3.3:1798220-1798239 MS.gene96587:CDS 25.0%
! ATCACAACAATGACAATATT+AGG + chr3.3:1799657-1799676 None:intergenic 25.0%
! GATTAAGTTTAACGATAAGT+TGG - chr3.3:1798641-1798660 MS.gene96587:CDS 25.0%
! GGGAATTTCATAAAACTTAT+TGG - chr3.3:1799803-1799822 MS.gene96587:intron 25.0%
! GTAAACATTCAATATTTCCT+CGG + chr3.3:1800424-1800443 None:intergenic 25.0%
! TTTGAATAAGTAATGGTTCT+TGG + chr3.3:1799846-1799865 None:intergenic 25.0%
! TTTGAGAAAAGGGAAAAATA+TGG - chr3.3:1798065-1798084 MS.gene96587:CDS 25.0%
!! AGTTTGATTTCATATTCAGT+TGG + chr3.3:1798215-1798234 None:intergenic 25.0%
!! AGTTTTTACAAGTGAACATT+AGG + chr3.3:1798817-1798836 None:intergenic 25.0%
!! ATCTTTGGAGAATTAAAAGT+AGG - chr3.3:1798757-1798776 MS.gene96587:CDS 25.0%
!! CTATCATGCTTAATGTATTT+TGG + chr3.3:1800639-1800658 None:intergenic 25.0%
!! GAAGACTTTTGAATAAGTAA+TGG + chr3.3:1799853-1799872 None:intergenic 25.0%
!! TATTTCTTTTCTTCTGAACA+TGG - chr3.3:1799074-1799093 MS.gene96587:intron 25.0%
!! TCTTTGGAGAATTAAAAGTA+GGG - chr3.3:1798758-1798777 MS.gene96587:CDS 25.0%
!! TTCATGCATTTTATGTCTAT+AGG - chr3.3:1798789-1798808 MS.gene96587:CDS 25.0%
!! TTCATGTATTTTATGTCCAT+GGG - chr3.3:1799151-1799170 MS.gene96587:intron 25.0%
!!! ATTGCATTATTTTATGCTTC+GGG - chr3.3:1800495-1800514 MS.gene96587:CDS 25.0%
!!! CATTGCATTATTTTATGCTT+CGG - chr3.3:1800494-1800513 MS.gene96587:CDS 25.0%
!!! TTTTAATTCCAAAGTTTCAC+AGG + chr3.3:1799215-1799234 None:intergenic 25.0%
AAACTAAAAAACACACAGAG+TGG + chr3.3:1799045-1799064 None:intergenic 30.0%
AACATGTAAAGTGTGTTTAG+GGG - chr3.3:1800599-1800618 MS.gene96587:CDS 30.0%
AACGCTTTCAATAGCAATAT+TGG + chr3.3:1799381-1799400 None:intergenic 30.0%
ACAACAATGACAATATTAGG+TGG + chr3.3:1799654-1799673 None:intergenic 30.0%
ACAACATGTAAAGTGTGTTT+AGG - chr3.3:1800597-1800616 MS.gene96587:CDS 30.0%
ACCTTCTTTCTTCTTGTAAA+TGG + chr3.3:1800030-1800049 None:intergenic 30.0%
AGAAGTGAGTGTAAGATTAA+GGG - chr3.3:1798619-1798638 MS.gene96587:CDS 30.0%
AGAATGTTAATTTCCATGTG+AGG - chr3.3:1799521-1799540 MS.gene96587:intron 30.0%
AGGAAAAGGATTTCTTATCA+TGG + chr3.3:1799876-1799895 None:intergenic 30.0%
ATATGACATGTATCAACCTT+AGG - chr3.3:1798916-1798935 MS.gene96587:CDS 30.0%
ATGATAATTTCTTCGATTGC+AGG + chr3.3:1798898-1798917 None:intergenic 30.0%
CAACATGTAAAGTGTGTTTA+GGG - chr3.3:1800598-1800617 MS.gene96587:CDS 30.0%
CAGGTTTACAAAATATTGTC+TGG + chr3.3:1798879-1798898 None:intergenic 30.0%
CTCGTATAAATATGAGTTGT+TGG - chr3.3:1799344-1799363 MS.gene96587:intron 30.0%
GAATGTTAATTTCCATGTGA+GGG - chr3.3:1799522-1799541 MS.gene96587:intron 30.0%
GAGCTAAATTTACGATAGAA+TGG - chr3.3:1799122-1799141 MS.gene96587:intron 30.0%
GAGTTGGAAACAATAAAAGA+GGG + chr3.3:1799274-1799293 None:intergenic 30.0%
GCAATGAATAACATACAAGA+TGG - chr3.3:1799688-1799707 MS.gene96587:intron 30.0%
GGAAAAGGATTTCTTATCAT+GGG + chr3.3:1799875-1799894 None:intergenic 30.0%
TAAACACACTTTACATGTTG+TGG + chr3.3:1800598-1800617 None:intergenic 30.0%
TAGGTTTGGATTTGAGAAAA+GGG - chr3.3:1798055-1798074 MS.gene96587:CDS 30.0%
TCCATTTACAAGAAGAAAGA+AGG - chr3.3:1800026-1800045 MS.gene96587:intron 30.0%
TTCATGTATCAAACAGATGA+AGG - chr3.3:1798730-1798749 MS.gene96587:CDS 30.0%
TTCCATCTTGACAAAATTCA+TGG + chr3.3:1800463-1800482 None:intergenic 30.0%
TTCTCTCAATACAATAACGA+TGG + chr3.3:1798603-1798622 None:intergenic 30.0%
TTTGTCAAGATGGAAACTTT+GGG - chr3.3:1800468-1800487 MS.gene96587:CDS 30.0%
! AACCATGAATTTTGTCAAGA+TGG - chr3.3:1800458-1800477 MS.gene96587:CDS 30.0%
! AATTGATATAAGTGTTGCTG+CGG - chr3.3:1798397-1798416 MS.gene96587:CDS 30.0%
! CTTTGGAGAATTAAAAGTAG+GGG - chr3.3:1798759-1798778 MS.gene96587:CDS 30.0%
! GTTCATGTATTTTATGTCCA+TGG - chr3.3:1799150-1799169 MS.gene96587:intron 30.0%
! TGAGTTGGAAACAATAAAAG+AGG + chr3.3:1799275-1799294 None:intergenic 30.0%
! TTTTGTCAAGATGGAAACTT+TGG - chr3.3:1800467-1800486 MS.gene96587:CDS 30.0%
!! AAGTTTAACGATAAGTTGGT+AGG - chr3.3:1798645-1798664 MS.gene96587:CDS 30.0%
!! AGTTTAACGATAAGTTGGTA+GGG - chr3.3:1798646-1798665 MS.gene96587:CDS 30.0%
!! TTGCATTATTTTATGCTTCG+GGG - chr3.3:1800496-1800515 MS.gene96587:CDS 30.0%
!! TTTTATTCTAGAGACAGCAA+GGG + chr3.3:1798972-1798991 None:intergenic 30.0%
!! TTTTTATTCTAGAGACAGCA+AGG + chr3.3:1798973-1798992 None:intergenic 30.0%
!!! TTTTTTCGACCTATTCTGAA+GGG - chr3.3:1799447-1799466 MS.gene96587:intron 30.0%
!!! TTTTTTTCGACCTATTCTGA+AGG - chr3.3:1799446-1799465 MS.gene96587:intron 30.0%
AATAATGGTAGGCTACTAAC+CGG + chr3.3:1798525-1798544 None:intergenic 35.0%
ACAGATGAAGGCTATATCTT+TGG - chr3.3:1798742-1798761 MS.gene96587:CDS 35.0%
AGTTTGTATGTCTATCAGTC+TGG - chr3.3:1800165-1800184 MS.gene96587:intron 35.0%
ATACGAGAAAGAGACAACAA+GGG + chr3.3:1799331-1799350 None:intergenic 35.0%
ATATTTCCCCTAAACCTTGA+AGG + chr3.3:1798673-1798692 None:intergenic 35.0%
ATTCAACAATGGAAAGTCCA+TGG - chr3.3:1800208-1800227 MS.gene96587:intron 35.0%
ATTGTTAAGGATTTCAAGGC+TGG - chr3.3:1798371-1798390 MS.gene96587:CDS 35.0%
CAAAATATTGTCTGGATGCA+AGG + chr3.3:1798871-1798890 None:intergenic 35.0%
CAATAAAAGAGGGAATCCTA+AGG + chr3.3:1799264-1799283 None:intergenic 35.0%
CTATCAAGACAGTTCTTATC+AGG + chr3.3:1799189-1799208 None:intergenic 35.0%
CTGGGTTACATATTCAACAA+TGG - chr3.3:1800197-1800216 MS.gene96587:intron 35.0%
CTTTAGACATCTACACTATG+AGG - chr3.3:1800704-1800723 MS.gene96587:CDS 35.0%
GAGAAGTGAGTGTAAGATTA+AGG - chr3.3:1798618-1798637 MS.gene96587:CDS 35.0%
GATAGTTTCCTGTGAAACTT+TGG - chr3.3:1799204-1799223 MS.gene96587:intron 35.0%
GCTTTCAATAGCAATATTGG+TGG + chr3.3:1799378-1799397 None:intergenic 35.0%
GGTGTGATTCGATATTTCTT+TGG + chr3.3:1798485-1798504 None:intergenic 35.0%
GTAGGTTTGGATTTGAGAAA+AGG - chr3.3:1798054-1798073 MS.gene96587:CDS 35.0%
GTCTATCAGTCTGGAAATTT+GGG - chr3.3:1800174-1800193 MS.gene96587:intron 35.0%
TATACGAGAAAGAGACAACA+AGG + chr3.3:1799332-1799351 None:intergenic 35.0%
TCGATATTTCTTTGGCAAGA+AGG + chr3.3:1798477-1798496 None:intergenic 35.0%
TGAGTGTCAAATGAATCCTA+AGG + chr3.3:1798935-1798954 None:intergenic 35.0%
TGTCATTGTTGTGATACACA+GGG - chr3.3:1799662-1799681 MS.gene96587:intron 35.0%
TGTCTATCAGTCTGGAAATT+TGG - chr3.3:1800173-1800192 MS.gene96587:intron 35.0%
TGTGTTTCATGGTAAGAATG+AGG - chr3.3:1798325-1798344 MS.gene96587:CDS 35.0%
TGTTGTGGATGAAAGATTGA+TGG + chr3.3:1800583-1800602 None:intergenic 35.0%
TTGTCATTGTTGTGATACAC+AGG - chr3.3:1799661-1799680 MS.gene96587:intron 35.0%
! ATTAAGAGTGTACGAGTTGT+TGG - chr3.3:1798148-1798167 MS.gene96587:CDS 35.0%
! CCTTGGAGTGATAAACTTTT+CGG + chr3.3:1799915-1799934 None:intergenic 35.0%
! TCATAGTTAGTCTCATCCTT+AGG - chr3.3:1799245-1799264 MS.gene96587:intron 35.0%
!! AGGGCATACGGATTTAATTT+TGG - chr3.3:1798442-1798461 MS.gene96587:CDS 35.0%
!! GGGCATACGGATTTAATTTT+GGG - chr3.3:1798443-1798462 MS.gene96587:CDS 35.0%
!! TGCATTATTTTATGCTTCGG+GGG - chr3.3:1800497-1800516 MS.gene96587:CDS 35.0%
AACAATGGAAAGTCCATGGA+AGG - chr3.3:1800212-1800231 MS.gene96587:intron 40.0%
ACAAAGTCAACAACCTTCCA+TGG + chr3.3:1800228-1800247 None:intergenic 40.0%
AGCGGATATTTGATCATGAC+AGG - chr3.3:1799976-1799995 MS.gene96587:intron 40.0%
AGCTATGCTGATGAAGGAAA+AGG + chr3.3:1799890-1799909 None:intergenic 40.0%
AGGCTGAAAGAATTGATGCT+AGG - chr3.3:1798117-1798136 MS.gene96587:CDS 40.0%
AGTGAGGTAGATGTTACATC+GGG + chr3.3:1800351-1800370 None:intergenic 40.0%
AGTGATTCATATTGCTTCCG+AGG - chr3.3:1800404-1800423 MS.gene96587:CDS 40.0%
CAAGTCAAGTACACCTATGT+TGG + chr3.3:1800289-1800308 None:intergenic 40.0%
CCGAAAAGTTTATCACTCCA+AGG - chr3.3:1799912-1799931 MS.gene96587:intron 40.0%
CGGATATTTGATCATGACAG+GGG - chr3.3:1799978-1799997 MS.gene96587:intron 40.0%
GAGTGAGGTAGATGTTACAT+CGG + chr3.3:1800352-1800371 None:intergenic 40.0%
GCGGATATTTGATCATGACA+GGG - chr3.3:1799977-1799996 MS.gene96587:intron 40.0%
GCGTTATGAACACTCACATT+AGG - chr3.3:1799396-1799415 MS.gene96587:intron 40.0%
GGCTGAAAGAATTGATGCTA+GGG - chr3.3:1798118-1798137 MS.gene96587:CDS 40.0%
GTCATCGAAATCTAGATCTC+TGG + chr3.3:1799749-1799768 None:intergenic 40.0%
GTCATTGTTGTGATACACAG+GGG - chr3.3:1799663-1799682 MS.gene96587:intron 40.0%
GTCGCTTCATGTAAAAGTTC+TGG - chr3.3:1800141-1800160 MS.gene96587:intron 40.0%
TAGACATCTACACTATGAGG+TGG - chr3.3:1800707-1800726 MS.gene96587:CDS 40.0%
TATATACGTTGTCACCGACA+AGG - chr3.3:1800263-1800282 MS.gene96587:CDS 40.0%
TTTCCATGTGAGGGTGAAAA+TGG - chr3.3:1799531-1799550 MS.gene96587:intron 40.0%
! CAGGATACATTAGTTTCCCA+TGG + chr3.3:1799170-1799189 None:intergenic 40.0%
! TACCATGTCTTGCTTGCTTT+TGG - chr3.3:1800093-1800112 MS.gene96587:intron 40.0%
! TAGCAATATTGGTGGATGCT+AGG + chr3.3:1799370-1799389 None:intergenic 40.0%
AAAGGAAAACGCCTACTTGC+TGG - chr3.3:1800674-1800693 MS.gene96587:CDS 45.0%
ACACACCAGCGAATTGAAAG+AGG + chr3.3:1799771-1799790 None:intergenic 45.0%
ACTCGTCTTCCCTTCAGAAT+AGG + chr3.3:1799459-1799478 None:intergenic 45.0%
AGAGACAGCAAGGGAGAAAT+TGG + chr3.3:1798963-1798982 None:intergenic 45.0%
AGAGGGAATGATCTGCTTCA+AGG - chr3.3:1798422-1798441 MS.gene96587:CDS 45.0%
AGAGTGTACGAGTTGTTGGA+CGG - chr3.3:1798152-1798171 MS.gene96587:CDS 45.0%
ATCAGTCTGGAAATTTGGGC+TGG - chr3.3:1800178-1800197 MS.gene96587:intron 45.0%
CATCACAACTAACCATCCTG+AGG + chr3.3:1800374-1800393 None:intergenic 45.0%
CCAAGGCGATCAATCAATTC+TGG - chr3.3:1799929-1799948 MS.gene96587:intron 45.0%
CCAGAATTGATTGATCGCCT+TGG + chr3.3:1799932-1799951 None:intergenic 45.0%
CTTTCAAAACCCCACCTTCT+CGG + chr3.3:1800546-1800565 None:intergenic 45.0%
GAGGGAATGATCTGCTTCAA+GGG - chr3.3:1798423-1798442 MS.gene96587:CDS 45.0%
GATGACCTCTTTCAATTCGC+TGG - chr3.3:1799763-1799782 MS.gene96587:intron 45.0%
GCAGCAGTTAAACGTAGGTT+TGG - chr3.3:1798041-1798060 MS.gene96587:CDS 45.0%
GGGACATAGTGAGTATGAGT+TGG + chr3.3:1799311-1799330 None:intergenic 45.0%
GTAGGGTCCTTCAAGGTTTA+GGG - chr3.3:1798663-1798682 MS.gene96587:CDS 45.0%
TAACATCTACCTCACTCCTC+AGG - chr3.3:1800355-1800374 MS.gene96587:CDS 45.0%
TACTCGCAGCAGTTAAACGT+AGG - chr3.3:1798036-1798055 MS.gene96587:CDS 45.0%
TAGAACTCGAGTTCCTCCAA+AGG - chr3.3:1800656-1800675 MS.gene96587:CDS 45.0%
TAGGGTCCTTCAAGGTTTAG+GGG - chr3.3:1798664-1798683 MS.gene96587:CDS 45.0%
TCAGTCTGGAAATTTGGGCT+GGG - chr3.3:1800179-1800198 MS.gene96587:intron 45.0%
TGCCAAAAGCAAGCAAGACA+TGG + chr3.3:1800098-1800117 None:intergenic 45.0%
TGGTGTGTGCAAGAATTGGA+GGG - chr3.3:1799783-1799802 MS.gene96587:intron 45.0%
TTCTGGCACGTTGCTTATTC+TGG - chr3.3:1799946-1799965 MS.gene96587:intron 45.0%
TTTCAAAACCCCACCTTCTC+GGG + chr3.3:1800545-1800564 None:intergenic 45.0%
! AAAACGCCTACTTGCTGGAT+TGG - chr3.3:1800679-1800698 MS.gene96587:CDS 45.0%
! AAAGCACCAATCCAGCAAGT+AGG + chr3.3:1800688-1800707 None:intergenic 45.0%
! AAGTAGGCGTTTTCCTTTGG+AGG + chr3.3:1800672-1800691 None:intergenic 45.0%
! AGCAAGTAGGCGTTTTCCTT+TGG + chr3.3:1800675-1800694 None:intergenic 45.0%
! CTCAGGATGGTTAGTTGTGA+TGG - chr3.3:1800372-1800391 MS.gene96587:CDS 45.0%
! GACGATGATGACGAACTACA+AGG - chr3.3:1798251-1798270 MS.gene96587:CDS 45.0%
! GCTTATTCTGGCTGTTCTAG+CGG - chr3.3:1799958-1799977 MS.gene96587:intron 45.0%
! GGATGAGAAGTATGCTGAGT+TGG + chr3.3:1799290-1799309 None:intergenic 45.0%
! TGATCTGCTTCAAGGGCATA+CGG - chr3.3:1798430-1798449 MS.gene96587:CDS 45.0%
!! GTCTTGCTTGCTTTTGGCAA+AGG - chr3.3:1800099-1800118 MS.gene96587:intron 45.0%
!! TAAGTTGGTAGGGTCCTTCA+AGG - chr3.3:1798656-1798675 MS.gene96587:CDS 45.0%
!! TACACCTATGTTGGCCTTGT+CGG + chr3.3:1800280-1800299 None:intergenic 45.0%
!! TAGCCATTTTCACCCTCACA+TGG + chr3.3:1799537-1799556 None:intergenic 45.0%
ACTAACCATCCTGAGGAGTG+AGG + chr3.3:1800367-1800386 None:intergenic 50.0%
ATCTACCTCACTCCTCAGGA+TGG - chr3.3:1800359-1800378 MS.gene96587:CDS 50.0%
ATGCATTGAGCAACCCGAGA+AGG - chr3.3:1800529-1800548 MS.gene96587:CDS 50.0%
ATTGAGCAACCCGAGAAGGT+GGG - chr3.3:1800533-1800552 MS.gene96587:CDS 50.0%
CTGGTGTGTGCAAGAATTGG+AGG - chr3.3:1799782-1799801 MS.gene96587:intron 50.0%
GGTAGGGTCCTTCAAGGTTT+AGG - chr3.3:1798662-1798681 MS.gene96587:CDS 50.0%
TCATCGTCGTCACGATCCAA+TGG + chr3.3:1798239-1798258 None:intergenic 50.0%
TCGCTGGTGTGTGCAAGAAT+TGG - chr3.3:1799779-1799798 MS.gene96587:intron 50.0%
TCGGTCAGCTATGCTGATGA+AGG + chr3.3:1799896-1799915 None:intergenic 50.0%
! ATAAGTGTTGCTGCGGCAAG+AGG - chr3.3:1798404-1798423 MS.gene96587:CDS 50.0%
! TAACCGGTGTCAAGCTGAAC+TGG + chr3.3:1798509-1798528 None:intergenic 50.0%
! TAAGTGTTGCTGCGGCAAGA+GGG - chr3.3:1798405-1798424 MS.gene96587:CDS 50.0%
! TGCTTTTGGCAAAGGCTCAG+AGG - chr3.3:1800107-1800126 MS.gene96587:intron 50.0%
CATTGAGCAACCCGAGAAGG+TGG - chr3.3:1800532-1800551 MS.gene96587:CDS 55.0%
CCTCCAGTTCAGCTTGACAC+CGG - chr3.3:1798503-1798522 MS.gene96587:CDS 55.0%
GTCACCGACAAGGCCAACAT+AGG - chr3.3:1800273-1800292 MS.gene96587:CDS 55.0%
TTGAGCAACCCGAGAAGGTG+GGG - chr3.3:1800534-1800553 MS.gene96587:CDS 55.0%
! CCGGTGTCAAGCTGAACTGG+AGG + chr3.3:1798506-1798525 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr3.3 gene 1798002 1800749 1798002 ID=MS.gene96587
chr3.3 mRNA 1798002 1800749 1798002 ID=MS.gene96587.t1;Parent=MS.gene96587
chr3.3 exon 1800227 1800749 1800227 ID=MS.gene96587.t1.exon1;Parent=MS.gene96587.t1
chr3.3 CDS 1800227 1800749 1800227 ID=cds.MS.gene96587.t1;Parent=MS.gene96587.t1
chr3.3 exon 1798002 1799068 1798002 ID=MS.gene96587.t1.exon2;Parent=MS.gene96587.t1
chr3.3 CDS 1798002 1799068 1798002 ID=cds.MS.gene96587.t1;Parent=MS.gene96587.t1
Gene Sequence

>MS.gene96587

ATGAAGAAGCTCTCAGTTGGTGATGCATTATCGTTACTCGCAGCAGTTAAACGTAGGTTTGGATTTGAGAAAAGGGAAAAATATGGATCTTTTCTACAAATTATGAAGGATTTCAAGGCTGAAAGAATTGATGCTAGGGATGTCAAATTAAGAGTGTACGAGTTGTTGGACGGCCATGAAGATTTAATTTCGAAATTCAACATCTTCTTGCCAACTGAATATGAAATCAAACTTCCATTGGATCGTGACGACGATGATGACGAACTACAAGGTCATATGTTAGAGACAAAAGATGCATTTGCATTTCTCGAGAAAGTAAAAGATGTGTTTCATGGTAAGAATGAGGAAAAGTATAATGAGTTTTTAAAAATTGTTAAGGATTTCAAGGCTGGAAGAATTGATATAAGTGTTGCTGCGGCAAGAGGGAATGATCTGCTTCAAGGGCATACGGATTTAATTTTGGGATTCAACGCCTTCTTGCCAAAGAAATATCGAATCACACCTCCAGTTCAGCTTGACACCGGTTAGTAGCCTACCATTATTTATATATTTATTTTTATTTATGCAGTTTTTTGCTATAAAGATTCAATAAATTGGTCCATCGTTATTGTATTGAGAGAAGTGAGTGTAAGATTAAGGGATTAAGTTTAACGATAAGTTGGTAGGGTCCTTCAAGGTTTAGGGGAAATATTTTCTTTTGTACAAGTTGATCATAGAATAGAAATATTTTCATGTATCAAACAGATGAAGGCTATATCTTTGGAGAATTAAAAGTAGGGGTTTGCAGTTCATGCATTTTATGTCTATAGGAACCTAATGTTCACTTGTAAAAACTGTCTTGATTAAAAGAAAATATAGCAGAAGCTCCTTGCATCCAGACAATATTTTGTAAACCTGCAATCGAAGAAATTATCATATGACATGTATCAACCTTAGGATTCATTTGACACTCATATCTCCAATTTCTCCCTTGCTGTCTCTAGAATAAAAACAAGTTGTAATCTGTAAGTCTAAGCTTGAAATCAAATAAAAGAAAGCATCCACTCTGTGTGTTTTTTAGTTTGTGTTTTCATATTTCTTTTCTTCTGAACATGGCTTTTGTTCTAACAACATTGTTGAAGAGCTAAATTTACGATAGAATGGAAATAGTTCATGTATTTTATGTCCATGGGAAACTAATGTATCCTGATAAGAACTGTCTTGATAGTTTCCTGTGAAACTTTGGAATTAAAAGTAGAAATTATCATAGTTAGTCTCATCCTTAGGATTCCCTCTTTTATTGTTTCCAACTCAGCATACTTCTCATCCAACTCATACTCACTATGTCCCTTGTTGTCTCTTTCTCGTATAAATATGAGTTGTTGGCCTAGCATCCACCAATATTGCTATTGAAAGCGTTATGAACACTCACATTAGGTCACATGTTTAGACGCGATAGAAAACATTTTTTTCGACCTATTCTGAAGGGAAGACGAGTCGTTCTTGATAGTATGTTAATTAATATTTTATGCTTTCTGTTAGAATGTTAATTTCCATGTGAGGGTGAAAATGGCTATCTAATGTTTCTTTATCTTCTCATAGTATATAAGATGAACAAAAAAAAAAAAAACATATCTTTCGGAAATATGAAAAAAGCATATGTTTTTAAACCACCTAATATTGTCATTGTTGTGATACACAGGGGAAGCAATGAATAACATACAAGATGGTTGTAAAATTTCTTGGGATATGCTTGATCTCATTTCCAGAGATCTAGATTTCGATGACCTCTTTCAATTCGCTGGTGTGTGCAAGAATTGGAGGGAATTTCATAAAACTTATTGGAAAAAGTTCTTGGCATTCCAAGAACCATTACTTATTCAAAAGTCTTCCCATGATAAGAAATCCTTTTCCTTCATCAGCATAGCTGACCGAAAAGTTTATCACTCCAAGGCGATCAATCAATTCTGGCACGTTGCTTATTCTGGCTGTTCTAGCGGATATTTGATCATGACAGGGGACAATAATTCTTTTCTTCTATTGAATCCATTTACAAGAAGAAAGAAGGTAATCAATACATCAACCTTTAAAGTCAATTCTTCTTATTTTGCTTACCATGTCTTGCTTGCTTTTGGCAAAGGCTCAGAGGAATTTGTCTTAGTCGCTTCATGTAAAAGTTCTGGTAGTTTGTATGTCTATCAGTCTGGAAATTTGGGCTGGGTTACATATTCAACAATGGAAAGTCCATGGAAGGTTGTTGACTTTGTTGTTTTGCATCATACTATATACGTTGTCACCGACAAGGCCAACATAGGTGTACTTGACTTGAATTCCACAGATATAAAATTTTTAGAACTGAAGAGTACACCCGATGTAACATCTACCTCACTCCTCAGGATGGTTAGTTGTGATGGACAACTTTTAGTGATTCATATTGCTTCCGAGGAAATATTGAATGTTTACAAGATAGACTTCTCAACCATGAATTTTGTCAAGATGGAAACTTTGGGTGACATTGCATTATTTTATGCTTCGGGGGAATACTTCTATGCATTGAGCAACCCGAGAAGGTGGGGTTTTGAAAGCAACTCTTTGTATGCCATCAATCTTTCATCCACAACATGTAAAGTGTGTTTAGGGGATGATAACGAACTGCCAAAATACATTAAGCATGATAGAACTCGAGTTCCTCCAAAGGAAAACGCCTACTTGCTGGATTGGTGCTTTAGACATCTACACTATGAGGTGGATCTTTCTCCAGTTGAGTAA
Protein sequence

>MS.gene96587.t1

MKKLSVGDALSLLAAVKRRFGFEKREKYGSFLQIMKDFKAERIDARDVKLRVYELLDGHEDLISKFNIFLPTEYEIKLPLDRDDDDDELQGHMLETKDAFAFLEKVKDVFHGKNEEKYNEFLKIVKDFKAGRIDISVAAARGNDLLQGHTDLILGFNAFLPKKYRITPPVQLDTGEAMNNIQDGCKISWDMLDLISRDLDFDDLFQFAGVCKNWREFHKTYWKKFLAFQEPLLIQKSSHDKKSFSFISIADRKVYHSKAINQFWHVAYSGCSSGYLIMTGDNNSFLLLNPFTRRKKVINTSTFKVNSSYFAYHVLLAFGKGSEEFVLVASCKSSGSLYVYQSGNLGWVTYSTMESPWKVVDFVVLHHTIYVVTDKANIGVLDLNSTDIKFLELKSTPDVTSTSLLRMVSCDGQLLVIHIASEEILNVYKIDFSTMNFVKMETLGDIALFYASGEYFYALSNPRRWGFESNSLYAINLSSTTCKVCLGDDNELPKYIKHDRTRVPPKENAYLLDWCFRHLHYEVDLSPVE