AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene96777

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene96777.t1 MTR_4g082230 91.029 379 14 4 6 373 38 407 0.0 677
MS.gene96777.t1 MTR_4g082290 91.534 378 12 4 7 373 39 407 0.0 676
MS.gene96777.t1 MTR_6g012690 81.679 131 24 0 7 137 39 169 2.41e-72 229
MS.gene96777.t1 MTR_7g011170 72.483 149 37 2 8 156 40 184 7.90e-69 219
MS.gene96777.t1 MTR_7g076740 66.917 133 42 1 8 140 41 171 1.48e-56 187
MS.gene96777.t1 MTR_8g031360 66.176 136 34 3 8 138 42 170 1.08e-55 184
MS.gene96777.t1 MTR_5g042030 64.567 127 38 1 6 132 33 152 1.09e-50 171
MS.gene96777.t1 MTR_2g089620 78.495 93 20 0 8 100 40 132 1.22e-49 170
MS.gene96777.t1 MTR_4g091490 78.261 92 20 0 8 99 41 132 2.73e-49 170
MS.gene96777.t1 MTR_2g011660 80.000 90 18 0 8 97 41 130 3.95e-49 169
MS.gene96777.t1 MTR_3g074520 55.782 147 56 2 8 148 40 183 8.83e-48 166
MS.gene96777.t1 MTR_4g478180 76.344 93 22 0 8 100 41 133 1.24e-47 165
MS.gene96777.t1 MTR_5g007370 73.118 93 25 0 8 100 40 132 2.93e-46 160
MS.gene96777.t1 MTR_1g100653 60.448 134 43 2 8 140 40 164 3.27e-45 157
MS.gene96777.t1 MTR_1g112760 71.875 96 24 1 4 96 34 129 3.29e-44 152
MS.gene96777.t1 MTR_5g029840 72.043 93 26 0 8 100 40 132 5.32e-44 155
MS.gene96777.t1 MTR_3g077110 72.917 96 23 1 4 96 33 128 7.09e-44 155
MS.gene96777.t1 MTR_1g085040 78.652 89 19 0 8 96 40 128 8.37e-44 155
MS.gene96777.t1 MTR_4g105130 72.917 96 23 1 4 96 33 128 1.33e-43 155
MS.gene96777.t1 MTR_3g461490 74.157 89 23 0 8 96 40 128 1.00e-42 151
MS.gene96777.t1 MTR_4g102380 73.034 89 24 0 8 96 40 128 3.05e-42 149
MS.gene96777.t1 MTR_1g085640 75.281 89 22 0 8 96 40 128 3.49e-42 152
MS.gene96777.t1 MTR_5g078140 74.157 89 23 0 8 96 40 128 5.77e-42 149
MS.gene96777.t1 MTR_7g110830 56.923 130 49 2 8 132 40 167 1.36e-41 150
MS.gene96777.t1 MTR_4g073420 64.356 101 36 0 8 108 40 140 1.98e-41 147
MS.gene96777.t1 MTR_5g079670 69.318 88 27 0 8 95 39 126 4.43e-41 144
MS.gene96777.t1 MTR_3g065440 73.864 88 23 0 8 95 40 127 4.68e-41 147
MS.gene96777.t1 MTR_8g095390 69.663 89 27 0 8 96 40 128 1.39e-40 145
MS.gene96777.t1 MTR_3g097450 64.286 98 35 0 8 105 40 137 4.74e-40 144
MS.gene96777.t1 MTR_7g111290 77.528 89 20 0 8 96 40 128 9.63e-40 145
MS.gene96777.t1 MTR_4g065017 53.175 126 49 2 1 116 35 160 2.13e-39 143
MS.gene96777.t1 MTR_2g064160 66.667 87 29 0 8 94 39 125 8.42e-39 141
MS.gene96777.t1 MTR_3g083540 69.663 89 27 0 8 96 69 157 1.00e-38 140
MS.gene96777.t1 MTR_7g111290 76.744 86 20 0 11 96 1 86 4.21e-38 140
MS.gene96777.t1 MTR_6g009430 56.250 112 40 1 8 119 40 142 6.99e-38 139
MS.gene96777.t1 MTR_1g076150 62.500 104 36 1 7 107 39 142 1.52e-37 136
MS.gene96777.t1 MTR_7g115650 72.152 79 22 0 8 86 40 118 2.04e-37 134
MS.gene96777.t1 MTR_4g485530 66.667 87 29 0 8 94 40 126 2.95e-37 133
MS.gene96777.t1 MTR_1g043050 79.221 77 16 0 8 84 40 116 1.97e-36 133
MS.gene96777.t1 MTR_1g043080 76.623 77 18 0 8 84 40 116 2.73e-36 132
MS.gene96777.t1 MTR_2g097910 64.835 91 31 1 12 102 52 141 2.76e-35 132
MS.gene96777.t1 MTR_2g089450 72.152 79 22 0 8 86 40 118 3.32e-35 129
MS.gene96777.t1 MTR_8g017440 60.000 95 38 0 8 102 40 134 5.65e-35 131
MS.gene96777.t1 MTR_7g096930 75.325 77 19 0 8 84 40 116 5.97e-35 130
MS.gene96777.t1 MTR_8g027345 64.211 95 32 1 8 100 40 134 1.24e-34 129
MS.gene96777.t1 MTR_0251s0050 71.429 77 22 0 8 84 41 117 2.77e-34 128
MS.gene96777.t1 MTR_2g099740 65.116 86 30 0 8 93 40 125 3.45e-34 130
MS.gene96777.t1 MTR_7g010210 70.886 79 23 0 8 86 40 118 7.61e-34 128
MS.gene96777.t1 MTR_0008s0390 57.843 102 39 1 8 109 41 138 8.85e-34 126
MS.gene96777.t1 MTR_7g010210 70.886 79 23 0 8 86 40 118 1.03e-33 126
MS.gene96777.t1 MTR_4g125520 74.026 77 20 0 8 84 40 116 1.04e-33 127
MS.gene96777.t1 MTR_3g028740 76.712 73 17 0 12 84 54 126 1.09e-33 128
MS.gene96777.t1 MTR_8g017340 64.706 85 30 0 8 92 41 125 1.31e-33 130
MS.gene96777.t1 MTR_8g017540 58.947 95 39 0 8 102 86 180 1.62e-33 129
MS.gene96777.t1 MTR_3g039990 68.750 80 25 0 8 87 41 120 1.75e-33 127
MS.gene96777.t1 MTR_7g117730 71.429 77 22 0 8 84 40 116 1.90e-33 125
MS.gene96777.t1 MTR_2g034790 68.831 77 24 0 8 84 40 116 2.64e-33 127
MS.gene96777.t1 MTR_2g089420 56.604 106 31 2 8 98 39 144 3.87e-33 129
MS.gene96777.t1 MTR_1g100667 62.637 91 33 1 8 98 41 130 5.61e-33 124
MS.gene96777.t1 MTR_7g087130 65.517 87 28 1 8 92 40 126 6.02e-33 126
MS.gene96777.t1 MTR_2g067420 71.622 74 21 0 6 79 40 113 6.20e-33 125
MS.gene96777.t1 MTR_4g121460 65.060 83 29 0 2 84 34 116 7.08e-33 125
MS.gene96777.t1 MTR_8g017350 63.529 85 31 0 8 92 41 125 8.24e-33 129
MS.gene96777.t1 MTR_8g017500 55.556 99 44 0 8 106 40 138 8.32e-33 125
MS.gene96777.t1 MTR_8g017390 56.436 101 44 0 8 108 41 141 1.29e-32 127
MS.gene96777.t1 MTR_0140s0030 67.089 79 26 0 8 86 41 119 1.60e-32 124
MS.gene96777.t1 MTR_0489s0020 67.089 79 26 0 8 86 41 119 1.60e-32 124
MS.gene96777.t1 MTR_8g098860 64.557 79 28 0 8 86 40 118 3.46e-32 123
MS.gene96777.t1 MTR_0008s0470 68.421 76 24 0 8 83 41 116 4.77e-32 122
MS.gene96777.t1 MTR_0197s0010 55.102 98 44 0 2 99 23 120 7.36e-32 120
MS.gene96777.t1 MTR_4g100720 68.354 79 25 0 13 91 46 124 7.75e-32 118
MS.gene96777.t1 MTR_1g017000 64.935 77 27 0 8 84 41 117 1.32e-31 120
MS.gene96777.t1 MTR_3g045430 59.551 89 36 0 8 96 41 129 2.96e-31 120
MS.gene96777.t1 MTR_4g057635 61.538 91 34 1 8 98 41 130 3.05e-31 121
MS.gene96777.t1 MTR_5g014990 67.532 77 25 0 8 84 41 117 6.01e-31 120
MS.gene96777.t1 MTR_6g012180 73.611 72 19 0 8 79 40 111 6.75e-31 120
MS.gene96777.t1 MTR_5g010020 69.014 71 22 0 8 78 40 110 1.27e-30 119
MS.gene96777.t1 MTR_1g045610 63.415 82 30 0 2 83 43 124 3.88e-30 116
MS.gene96777.t1 MTR_7g102110 59.341 91 36 1 8 98 41 130 4.06e-30 117
MS.gene96777.t1 MTR_1g073170 62.195 82 31 0 2 83 42 123 4.47e-30 116
MS.gene96777.t1 MTR_1g017140 65.385 78 27 0 7 84 40 117 4.78e-30 118
MS.gene96777.t1 MTR_6g055910 54.128 109 46 2 1 106 32 139 5.15e-30 117
MS.gene96777.t1 MTR_0008s0280 64.000 75 27 0 8 82 40 114 5.88e-30 115
MS.gene96777.t1 MTR_3g103570 64.935 77 27 0 8 84 41 117 7.06e-30 117
MS.gene96777.t1 MTR_8g020490 69.333 75 23 0 12 86 40 114 9.22e-30 115
MS.gene96777.t1 MTR_6g055910 58.511 94 38 1 13 106 18 110 1.14e-29 115
MS.gene96777.t1 MTR_4g063100 65.753 73 25 0 11 83 9 81 1.77e-29 114
MS.gene96777.t1 MTR_0063s0090 64.865 74 26 0 8 81 40 113 1.81e-29 114
MS.gene96777.t1 MTR_3g052450 57.955 88 36 1 2 89 62 148 3.14e-29 119
MS.gene96777.t1 MTR_4g063100 63.158 76 28 0 8 83 35 110 3.26e-29 114
MS.gene96777.t1 MTR_1g062940 63.636 77 28 0 8 84 34 110 4.85e-29 112
MS.gene96777.t1 MTR_8g042410 59.091 88 35 1 2 89 59 145 6.21e-29 118
MS.gene96777.t1 MTR_3g011610 59.091 88 35 1 2 89 59 145 8.75e-29 117
MS.gene96777.t1 MTR_3g052430 57.955 88 36 1 2 89 63 149 1.37e-28 117
MS.gene96777.t1 MTR_5g079120 53.061 98 45 1 2 98 83 180 2.74e-28 112
MS.gene96777.t1 MTR_2g095520 69.014 71 22 0 8 78 41 111 2.76e-28 113
MS.gene96777.t1 MTR_1g110460 53.191 94 44 0 2 95 48 141 5.26e-28 112
MS.gene96777.t1 MTR_2g096380 46.491 114 58 1 11 121 18 131 5.74e-28 109
MS.gene96777.t1 MTR_6g090405 61.538 78 30 0 8 85 41 118 9.46e-28 110
MS.gene96777.t1 MTR_5g079290 57.143 84 36 0 2 85 39 122 9.66e-28 110
MS.gene96777.t1 MTR_2g096380 45.299 117 61 1 8 121 34 150 1.09e-27 109
MS.gene96777.t1 MTR_7g035075 60.759 79 31 0 8 86 42 120 1.34e-27 108
MS.gene96777.t1 MTR_5g079220 58.333 84 35 0 2 85 43 126 2.29e-27 109
MS.gene96777.t1 MTR_1g086530 52.222 90 43 0 8 97 61 150 2.95e-27 109
MS.gene96777.t1 MTR_4g128670 66.197 71 24 0 8 78 41 111 3.33e-27 110
MS.gene96777.t1 MTR_4g097570 67.143 70 23 0 8 77 41 110 4.67e-27 108
MS.gene96777.t1 MTR_1g021230 62.162 74 28 0 10 83 87 160 6.29e-27 111
MS.gene96777.t1 MTR_6g006030 57.500 80 34 0 8 87 42 121 1.00e-26 105
MS.gene96777.t1 MTR_5g078800 59.036 83 34 0 2 84 29 111 1.13e-26 107
MS.gene96777.t1 MTR_7g109320 59.140 93 38 0 2 94 34 126 1.61e-26 108
MS.gene96777.t1 MTR_0247s0040 61.842 76 29 0 6 81 33 108 1.71e-26 104
MS.gene96777.t1 MTR_5g078910 55.952 84 37 0 2 85 29 112 1.72e-26 107
MS.gene96777.t1 MTR_1g086510 55.056 89 40 0 2 90 43 131 2.18e-26 106
MS.gene96777.t1 MTR_0193s0090 54.348 92 41 1 6 97 33 123 2.45e-26 105
MS.gene96777.t1 MTR_4g097570 67.647 68 22 0 10 77 44 111 2.68e-26 107
MS.gene96777.t1 MTR_7g017260 56.977 86 35 1 2 85 47 132 6.73e-26 105
MS.gene96777.t1 MTR_5g078930 61.250 80 31 0 2 81 31 110 9.16e-26 103
MS.gene96777.t1 MTR_0001s0360 55.952 84 37 0 2 85 29 112 1.06e-25 104
MS.gene96777.t1 MTR_8g060940 59.494 79 32 0 2 80 29 107 1.27e-25 103
MS.gene96777.t1 MTR_5g078860 56.627 83 36 0 2 84 29 111 1.44e-25 105
MS.gene96777.t1 MTR_5g078950 57.500 80 34 0 2 81 29 108 7.57e-25 102
MS.gene96777.t1 MTR_2g088170 59.091 88 35 1 2 89 51 137 8.52e-25 105
MS.gene96777.t1 MTR_1g083630 53.659 82 37 1 8 89 40 120 2.84e-23 101
MS.gene96777.t1 MTR_5g088080 43.925 107 56 3 8 113 40 143 3.20e-23 97.8
MS.gene96777.t1 MTR_5g088150 43.925 107 56 3 8 113 40 143 3.20e-23 97.8
MS.gene96777.t1 MTR_5g488210 43.925 107 56 3 8 113 40 143 3.20e-23 97.8
MS.gene96777.t1 MTR_5g088640 43.925 107 56 3 8 113 40 143 3.35e-23 98.2
MS.gene96777.t1 MTR_5g488170 44.660 103 53 3 12 113 44 143 6.40e-23 96.7
MS.gene96777.t1 MTR_4g128190 43.810 105 58 1 12 115 30 134 7.20e-23 96.3
MS.gene96777.t1 MTR_2g033170 51.042 96 47 0 2 97 46 141 8.06e-23 98.2
MS.gene96777.t1 MTR_5g062790 49.412 85 41 2 8 91 37 120 2.88e-22 96.3
MS.gene96777.t1 MTR_8g006470 54.667 75 32 2 14 87 44 117 1.27e-21 94.0
MS.gene96777.t1 MTR_4g123040 50.000 96 48 0 2 97 46 141 8.71e-21 92.0
MS.gene96777.t1 MTR_4g019370 51.899 79 34 1 16 94 71 145 4.31e-20 90.5
MS.gene96777.t1 MTR_3g101290 58.824 68 28 0 16 83 70 137 5.10e-20 88.2
MS.gene96777.t1 MTR_5g088610 42.593 108 59 3 8 113 37 143 7.57e-20 90.1
MS.gene96777.t1 MTR_5g016510 46.154 91 48 1 16 105 38 128 7.77e-20 89.4
MS.gene96777.t1 MTR_5g007300 73.469 49 13 0 8 56 92 140 2.99e-19 83.6
MS.gene96777.t1 MTR_4g029540 46.535 101 48 4 14 111 44 141 3.34e-19 87.4
MS.gene96777.t1 MTR_3g463400 49.351 77 37 1 10 86 162 236 9.33e-19 87.8
MS.gene96777.t1 MTR_5g070020 49.351 77 37 1 10 86 151 225 2.26e-18 85.9
MS.gene96777.t1 MTR_7g451170 33.577 137 75 2 16 152 224 344 3.36e-18 85.9
MS.gene96777.t1 MTR_7g061330 53.623 69 32 0 16 84 146 214 5.21e-18 85.9
MS.gene96777.t1 MTR_7g461410 53.623 69 32 0 16 84 146 214 5.21e-18 85.9
MS.gene96777.t1 MTR_4g094982 41.509 106 55 2 16 114 38 143 6.74e-18 83.2
MS.gene96777.t1 MTR_7g061330 53.623 69 32 0 16 84 110 178 7.43e-18 85.5
MS.gene96777.t1 MTR_6g015455 41.935 93 54 0 16 108 38 130 8.27e-18 85.9
MS.gene96777.t1 MTR_4g105660 45.679 81 42 1 6 86 205 283 2.23e-17 83.6
MS.gene96777.t1 MTR_6g074860 42.105 95 54 1 16 110 37 130 1.26e-16 79.0
MS.gene96777.t1 MTR_3g077650 37.500 96 53 1 16 111 214 302 2.41e-16 80.5
MS.gene96777.t1 MTR_7g037260 43.662 71 40 0 16 86 178 248 3.01e-16 79.7
MS.gene96777.t1 MTR_1g057980 50.794 63 31 0 16 78 113 175 3.10e-16 79.0
MS.gene96777.t1 MTR_5g049190 46.479 71 38 0 16 86 52 122 3.56e-16 77.8
MS.gene96777.t1 MTR_4g082040 48.000 75 37 1 10 84 134 206 3.80e-16 79.7
MS.gene96777.t1 MTR_4g088015 43.662 71 40 0 16 86 254 324 3.96e-16 79.7
MS.gene96777.t1 MTR_5g082910 52.308 65 31 0 16 80 52 116 6.20e-16 77.8
MS.gene96777.t1 MTR_5g041570 46.667 75 38 1 10 84 163 235 6.23e-16 79.3
MS.gene96777.t1 MTR_6g027340 43.902 82 45 1 16 97 49 129 8.09e-16 75.9
MS.gene96777.t1 MTR_3g110028 47.826 69 36 0 16 84 118 186 9.11e-16 79.3
MS.gene96777.t1 MTR_7g035350 50.794 63 31 0 16 78 258 320 1.09e-15 78.6
MS.gene96777.t1 MTR_6g027360 44.318 88 46 2 10 97 107 191 1.26e-15 77.0
MS.gene96777.t1 MTR_1g026870 36.283 113 63 1 16 119 118 230 5.00e-15 77.0
MS.gene96777.t1 MTR_7g450950 46.032 63 34 0 16 78 190 252 7.85e-15 75.1
MS.gene96777.t1 MTR_6g027370 47.059 68 36 0 16 83 132 199 1.19e-14 74.7
MS.gene96777.t1 MTR_7g086960 47.059 68 36 0 16 83 122 189 9.40e-14 72.0
MS.gene96777.t1 MTR_6g055910 50.725 69 33 1 38 106 2 69 1.24e-13 69.7
MS.gene96777.t1 MTR_1g085880 47.368 76 39 1 8 82 40 115 1.72e-13 68.9
MS.gene96777.t1 MTR_1g085770 47.368 76 39 1 8 82 40 115 5.01e-13 69.3
MS.gene96777.t1 MTR_5g010650 48.387 62 32 0 16 77 143 204 7.61e-13 70.1
MS.gene96777.t1 MTR_7g061550 41.463 82 46 1 14 93 41 122 7.64e-13 69.3
MS.gene96777.t1 MTR_4g063100 62.791 43 16 0 41 83 4 46 9.54e-13 66.6
MS.gene96777.t1 MTR_7g037130 41.270 63 37 0 16 78 178 240 1.28e-12 68.6
MS.gene96777.t1 MTR_3g089045 45.946 74 38 1 10 83 45 116 1.74e-12 67.8
MS.gene96777.t1 MTR_2g096380 39.286 84 48 1 41 121 4 87 3.65e-12 64.7
MS.gene96777.t1 MTR_5g007310 73.529 34 9 0 67 100 7 40 2.12e-11 63.5
MS.gene96777.t1 MTR_0023s0210 52.941 51 24 0 6 56 33 83 5.05e-11 58.9
MS.gene96777.t1 MTR_5g038910 41.538 65 38 0 19 83 62 126 8.13e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene96777.t1 AT3G01140 41.304 368 137 11 8 366 40 337 1.89e-69 222
MS.gene96777.t1 AT3G01140 41.304 368 137 11 8 366 83 380 7.35e-69 221
MS.gene96777.t1 AT5G15310 73.469 147 37 2 8 154 40 184 2.41e-68 216
MS.gene96777.t1 AT5G15310 73.469 147 37 2 8 154 40 184 3.37e-68 218
MS.gene96777.t1 AT5G15310 73.469 147 37 2 8 154 40 184 3.68e-68 218
MS.gene96777.t1 AT3G61250 69.231 130 36 1 8 137 40 165 1.78e-57 189
MS.gene96777.t1 AT4G21440 78.261 92 20 0 8 99 40 131 2.97e-49 169
MS.gene96777.t1 AT4G05100 78.889 90 19 0 8 97 41 130 8.78e-49 167
MS.gene96777.t1 AT5G54230 82.222 90 16 0 8 97 40 129 1.77e-48 166
MS.gene96777.t1 AT5G10280 57.857 140 52 2 7 146 39 171 8.69e-48 165
MS.gene96777.t1 AT4G28110 64.167 120 43 0 8 127 40 159 1.03e-47 163
MS.gene96777.t1 AT3G02940 74.468 94 24 0 7 100 39 132 1.13e-47 164
MS.gene96777.t1 AT5G16770 75.532 94 23 0 7 100 39 132 1.19e-47 164
MS.gene96777.t1 AT5G16770 75.532 94 23 0 7 100 39 132 1.19e-47 164
MS.gene96777.t1 AT3G02940 75.269 93 23 0 8 100 40 132 2.38e-47 164
MS.gene96777.t1 AT3G02940 75.269 93 23 0 8 100 40 132 2.38e-47 164
MS.gene96777.t1 AT5G16770 75.532 94 23 0 7 100 39 132 2.77e-47 164
MS.gene96777.t1 AT5G16770 75.532 94 23 0 7 100 39 132 2.77e-47 164
MS.gene96777.t1 AT5G65230 75.269 93 23 0 7 99 39 131 4.23e-47 162
MS.gene96777.t1 AT1G34670 75.269 93 23 0 7 99 39 131 9.05e-46 160
MS.gene96777.t1 AT4G17785 67.890 109 34 1 8 115 41 149 2.66e-45 159
MS.gene96777.t1 AT4G17785 67.890 109 34 1 8 115 41 149 3.47e-45 159
MS.gene96777.t1 AT5G61420 72.632 95 26 0 2 96 34 128 5.68e-45 159
MS.gene96777.t1 AT5G07700 68.317 101 32 0 2 102 34 134 1.66e-44 157
MS.gene96777.t1 AT5G07700 68.317 101 32 0 2 102 34 134 1.66e-44 157
MS.gene96777.t1 AT4G12350 73.684 95 21 1 6 96 34 128 4.47e-44 154
MS.gene96777.t1 AT5G07690 70.526 95 28 0 2 96 34 128 2.17e-43 154
MS.gene96777.t1 AT4G34990 64.486 107 34 1 8 114 40 142 3.10e-43 151
MS.gene96777.t1 AT1G18570 72.340 94 26 0 2 95 35 128 4.67e-43 153
MS.gene96777.t1 AT5G26660 76.404 89 21 0 8 96 40 128 6.00e-43 153
MS.gene96777.t1 AT4G22680 71.579 95 23 1 6 96 34 128 9.60e-43 150
MS.gene96777.t1 AT5G60890 70.526 95 28 0 2 96 34 128 1.32e-42 150
MS.gene96777.t1 AT4G38620 43.750 176 97 1 8 181 40 215 2.13e-42 149
MS.gene96777.t1 AT1G74430 74.157 89 23 0 8 96 40 128 2.29e-42 149
MS.gene96777.t1 AT1G74080 66.346 104 35 0 2 105 34 137 2.70e-42 150
MS.gene96777.t1 AT5G62320 72.727 88 24 0 8 95 48 135 3.22e-42 148
MS.gene96777.t1 AT5G56110 73.034 89 24 0 8 96 40 128 3.32e-42 150
MS.gene96777.t1 AT5G16600 72.632 95 22 1 6 96 34 128 5.20e-42 150
MS.gene96777.t1 AT1G57560 65.000 100 35 0 8 107 40 139 7.38e-42 148
MS.gene96777.t1 AT1G57560 70.787 89 26 0 8 96 40 128 1.48e-41 148
MS.gene96777.t1 AT5G26660 76.471 85 20 0 12 96 13 97 1.56e-41 148
MS.gene96777.t1 AT1G66230 68.000 100 27 1 8 102 40 139 1.96e-41 147
MS.gene96777.t1 AT1G09540 71.910 89 25 0 8 96 40 128 4.78e-41 148
MS.gene96777.t1 AT1G18710 68.817 93 29 0 8 100 40 132 5.42e-41 145
MS.gene96777.t1 AT4G01680 75.000 88 22 0 8 95 40 127 2.69e-40 143
MS.gene96777.t1 AT3G13540 70.787 89 26 0 8 96 51 139 2.90e-40 143
MS.gene96777.t1 AT1G35515 67.742 93 30 0 2 94 34 126 3.29e-40 142
MS.gene96777.t1 AT4G09460 70.455 88 26 0 8 95 40 127 4.71e-40 142
MS.gene96777.t1 AT1G22640 68.182 88 28 0 8 95 40 127 5.23e-40 142
MS.gene96777.t1 AT4G01680 75.000 88 22 0 8 95 40 127 6.91e-40 144
MS.gene96777.t1 AT2G16720 69.318 88 27 0 8 95 40 127 1.18e-39 142
MS.gene96777.t1 AT5G14340 57.658 111 44 1 4 111 45 155 2.84e-39 141
MS.gene96777.t1 AT4G01680 76.471 85 20 0 11 95 55 139 9.93e-39 142
MS.gene96777.t1 AT2G31180 79.747 79 16 0 8 86 40 118 5.53e-38 137
MS.gene96777.t1 AT1G06180 81.818 77 14 0 8 84 40 116 5.99e-38 137
MS.gene96777.t1 AT3G12720 64.368 87 31 0 8 94 50 136 2.38e-37 137
MS.gene96777.t1 AT3G23250 63.366 101 36 1 7 106 39 139 3.38e-36 133
MS.gene96777.t1 AT5G62470 51.538 130 57 3 8 137 40 163 9.87e-36 134
MS.gene96777.t1 AT3G47600 49.624 133 64 2 7 137 33 164 1.24e-35 133
MS.gene96777.t1 AT1G16490 73.077 78 21 0 8 85 42 119 2.16e-35 131
MS.gene96777.t1 AT3G47600 50.000 132 63 2 8 137 40 170 2.60e-35 132
MS.gene96777.t1 AT5G12870 71.250 80 23 0 8 87 46 125 6.03e-35 130
MS.gene96777.t1 AT1G56160 75.641 78 19 0 8 85 42 119 6.65e-35 130
MS.gene96777.t1 AT5G15310 64.078 103 35 2 52 154 5 105 3.24e-34 127
MS.gene96777.t1 AT1G79180 54.962 131 44 3 8 138 42 157 3.90e-34 128
MS.gene96777.t1 AT3G28470 67.416 89 29 0 8 96 40 128 4.52e-34 128
MS.gene96777.t1 AT5G62470 51.538 130 56 4 8 137 40 162 5.80e-34 129
MS.gene96777.t1 AT3G12820 70.886 79 23 0 8 86 42 120 1.09e-33 125
MS.gene96777.t1 AT1G63910 53.211 109 45 2 8 116 40 142 1.65e-33 128
MS.gene96777.t1 AT1G74650 71.250 80 23 0 8 87 40 119 1.95e-33 127
MS.gene96777.t1 AT3G28910 67.470 83 27 0 8 90 40 122 3.48e-33 126
MS.gene96777.t1 AT3G13890 68.831 77 24 0 8 84 40 116 7.40e-33 126
MS.gene96777.t1 AT5G14750 67.532 77 25 0 8 84 44 120 7.50e-33 122
MS.gene96777.t1 AT1G08810 66.265 83 28 0 8 90 40 122 4.30e-32 122
MS.gene96777.t1 AT1G79180 54.762 126 42 3 13 138 80 190 5.66e-32 123
MS.gene96777.t1 AT2G26960 42.331 163 83 6 13 170 53 209 6.78e-32 125
MS.gene96777.t1 AT5G35550 71.429 77 22 0 8 84 42 118 9.67e-32 120
MS.gene96777.t1 AT5G49330 67.532 77 25 0 8 84 40 116 1.13e-31 122
MS.gene96777.t1 AT3G08500 73.973 73 19 0 12 84 62 134 1.44e-31 122
MS.gene96777.t1 AT5G40330 66.234 77 26 0 8 84 40 116 1.45e-31 119
MS.gene96777.t1 AT3G62610 59.783 92 37 0 2 93 34 125 1.86e-31 122
MS.gene96777.t1 AT3G49690 68.831 77 24 0 8 84 41 117 2.71e-31 120
MS.gene96777.t1 AT5G35550 70.130 77 23 0 8 84 45 121 3.62e-31 119
MS.gene96777.t1 AT2G47460 62.651 83 31 0 2 84 34 116 4.34e-31 121
MS.gene96777.t1 AT5G14750 67.532 77 22 1 8 84 13 86 5.32e-31 116
MS.gene96777.t1 AT5G57620 66.667 78 26 0 7 84 40 117 7.68e-31 120
MS.gene96777.t1 AT3G27920 62.821 78 29 0 8 85 42 119 9.46e-31 117
MS.gene96777.t1 AT3G13890 62.651 83 31 0 2 84 43 125 1.26e-30 120
MS.gene96777.t1 AT5G65790 67.532 77 25 0 8 84 41 117 1.33e-30 120
MS.gene96777.t1 AT5G55020 63.636 88 31 1 2 89 48 134 3.79e-30 121
MS.gene96777.t1 AT3G12820 70.423 71 21 0 16 86 2 72 3.86e-30 114
MS.gene96777.t1 AT5G40350 47.458 118 53 1 2 119 39 147 3.88e-30 115
MS.gene96777.t1 AT5G52600 60.215 93 28 1 13 96 45 137 4.00e-30 115
MS.gene96777.t1 AT5G40350 49.074 108 46 1 12 119 4 102 7.66e-30 113
MS.gene96777.t1 AT4G37780 62.338 77 29 0 8 84 41 117 1.96e-29 115
MS.gene96777.t1 AT4G13480 63.415 82 30 0 2 83 28 109 2.74e-29 114
MS.gene96777.t1 AT5G06100 59.091 88 35 1 2 89 54 140 3.84e-29 117
MS.gene96777.t1 AT5G52260 69.737 76 23 0 8 83 40 115 5.02e-29 114
MS.gene96777.t1 AT5G23000 64.935 77 27 0 8 84 41 117 5.48e-29 115
MS.gene96777.t1 AT3G24310 65.789 76 26 0 8 83 46 121 7.65e-29 113
MS.gene96777.t1 AT3G01530 53.000 100 44 1 8 107 53 149 7.92e-29 111
MS.gene96777.t1 AT5G06100 59.091 88 35 1 2 89 54 140 8.56e-29 117
MS.gene96777.t1 AT5G06100 59.091 88 35 1 2 89 54 140 8.56e-29 117
MS.gene96777.t1 AT5G06100 59.091 88 35 1 2 89 54 140 8.56e-29 117
MS.gene96777.t1 AT5G06100 59.091 88 35 1 2 89 54 140 8.56e-29 117
MS.gene96777.t1 AT4G26930 65.789 76 25 1 14 89 53 127 1.05e-28 115
MS.gene96777.t1 AT1G25340 54.255 94 43 0 2 95 40 133 1.27e-28 113
MS.gene96777.t1 AT2G32460 56.383 94 40 1 2 95 28 120 1.98e-28 115
MS.gene96777.t1 AT2G32460 56.383 94 40 1 2 95 40 132 2.02e-28 116
MS.gene96777.t1 AT3G53200 66.667 72 24 0 12 83 8 79 2.15e-28 110
MS.gene96777.t1 AT5G59780 63.158 76 28 0 8 83 36 111 2.28e-28 111
MS.gene96777.t1 AT3G30210 65.333 75 26 0 8 82 55 129 2.42e-28 112
MS.gene96777.t1 AT3G46130 63.158 76 28 0 8 83 37 112 2.88e-28 111
MS.gene96777.t1 AT5G59780 65.278 72 25 0 12 83 19 90 2.98e-28 110
MS.gene96777.t1 AT3G46130 65.278 72 25 0 12 83 19 90 5.15e-28 110
MS.gene96777.t1 AT3G11440 60.000 80 31 1 10 89 71 149 6.33e-28 114
MS.gene96777.t1 AT2G36890 57.955 88 37 0 7 94 40 127 8.50e-28 111
MS.gene96777.t1 AT3G53200 64.474 76 27 0 8 83 37 112 9.20e-28 109
MS.gene96777.t1 AT4G25560 64.474 76 27 0 8 83 38 113 1.01e-27 110
MS.gene96777.t1 AT1G22640 65.217 69 24 0 27 95 2 70 1.07e-27 108
MS.gene96777.t1 AT3G46130 66.197 71 24 0 13 83 10 80 1.11e-27 108
MS.gene96777.t1 AT3G27810 46.957 115 53 2 8 114 48 162 1.11e-27 108
MS.gene96777.t1 AT3G11440 55.682 88 38 1 2 89 63 149 1.29e-27 114
MS.gene96777.t1 AT3G11440 55.682 88 38 1 2 89 63 149 1.29e-27 114
MS.gene96777.t1 AT3G11440 55.682 88 38 1 2 89 63 149 1.29e-27 114
MS.gene96777.t1 AT1G48000 54.167 96 44 0 2 97 54 149 1.30e-27 109
MS.gene96777.t1 AT3G27810 46.429 112 52 2 11 114 2 113 1.47e-27 107
MS.gene96777.t1 AT2G36890 57.955 88 37 0 7 94 81 168 1.51e-27 111
MS.gene96777.t1 AT1G66370 59.756 82 33 0 2 83 30 111 2.00e-27 108
MS.gene96777.t1 AT2G47190 56.627 83 36 0 8 90 48 130 2.08e-27 109
MS.gene96777.t1 AT1G68320 54.545 88 40 0 8 95 47 134 5.02e-27 108
MS.gene96777.t1 AT1G71030 58.442 77 32 0 19 95 5 81 5.91e-27 105
MS.gene96777.t1 AT1G71030 58.442 77 32 0 19 95 19 95 8.12e-27 105
MS.gene96777.t1 AT3G48920 55.682 88 36 1 1 85 36 123 1.33e-26 107
MS.gene96777.t1 AT1G25340 57.692 78 33 0 18 95 51 128 1.78e-25 104
MS.gene96777.t1 AT1G25340 57.692 78 33 0 18 95 51 128 3.77e-25 104
MS.gene96777.t1 AT1G18960 50.000 88 42 1 9 96 36 121 6.56e-25 103
MS.gene96777.t1 AT1G66380 67.123 73 24 0 11 83 6 78 7.32e-25 97.8
MS.gene96777.t1 AT1G66380 62.195 82 31 0 2 83 30 111 1.41e-24 98.2
MS.gene96777.t1 AT3G23250 60.494 81 31 1 27 106 2 82 1.53e-24 100
MS.gene96777.t1 AT3G06490 52.083 96 46 0 2 97 41 136 3.28e-24 102
MS.gene96777.t1 AT1G56650 60.976 82 32 0 2 83 30 111 1.79e-23 98.2
MS.gene96777.t1 AT1G66390 59.756 82 33 0 2 83 30 111 6.97e-23 96.7
MS.gene96777.t1 AT5G49620 50.000 96 48 0 2 97 48 143 3.78e-22 95.9
MS.gene96777.t1 AT5G14750 67.241 58 19 0 27 84 2 59 6.04e-22 91.3
MS.gene96777.t1 AT5G14750 67.241 58 19 0 27 84 2 59 6.04e-22 91.3
MS.gene96777.t1 AT2G26950 50.000 82 40 1 8 89 44 124 1.04e-21 95.9
MS.gene96777.t1 AT3G60460 57.333 75 30 2 14 87 45 118 1.39e-21 94.4
MS.gene96777.t1 AT5G61420 79.167 48 10 0 49 96 2 49 9.42e-20 88.6
MS.gene96777.t1 AT3G09230 55.072 69 31 0 16 84 88 156 4.84e-19 88.2
MS.gene96777.t1 AT5G67300 45.977 87 45 1 16 102 39 123 5.41e-19 87.0
MS.gene96777.t1 AT5G49620 43.636 110 48 1 2 97 48 157 8.60e-19 86.7
MS.gene96777.t1 AT2G39880 57.353 68 29 0 16 83 83 150 9.55e-19 87.0
MS.gene96777.t1 AT4G37260 50.685 73 36 0 16 88 46 118 2.97e-18 85.1
MS.gene96777.t1 AT2G25230 47.945 73 38 0 16 88 59 131 9.24e-18 82.0
MS.gene96777.t1 AT3G55730 51.389 72 35 0 16 87 89 160 1.75e-17 83.6
MS.gene96777.t1 AT2G23290 51.429 70 34 0 16 85 46 115 1.89e-17 82.4
MS.gene96777.t1 AT4G18770 46.479 71 38 0 16 86 250 320 2.02e-17 83.6
MS.gene96777.t1 AT5G40360 49.275 69 34 1 16 84 191 258 3.03e-17 82.4
MS.gene96777.t1 AT4G28110 55.556 72 32 0 56 127 4 75 6.61e-17 79.0
MS.gene96777.t1 AT3G50060 47.436 78 40 1 16 93 39 115 7.15e-17 80.9
MS.gene96777.t1 AT5G02320 49.275 69 35 0 16 84 160 228 1.20e-16 81.6
MS.gene96777.t1 AT5G02320 49.275 69 35 0 16 84 160 228 1.20e-16 81.6
MS.gene96777.t1 AT3G27785 47.887 71 37 0 16 86 222 292 1.32e-16 81.3
MS.gene96777.t1 AT5G02320 49.275 69 35 0 16 84 100 168 1.48e-16 81.3
MS.gene96777.t1 AT5G58850 50.725 69 32 1 10 78 134 200 1.93e-16 80.9
MS.gene96777.t1 AT1G69560 48.000 75 37 1 10 84 136 208 1.94e-16 79.7
MS.gene96777.t1 AT1G69560 48.000 75 37 1 10 84 152 224 2.12e-16 80.1
MS.gene96777.t1 AT1G26780 48.000 75 37 1 10 84 127 199 4.67e-16 79.0
MS.gene96777.t1 AT1G17950 50.000 74 35 1 10 83 34 105 4.96e-16 77.4
MS.gene96777.t1 AT1G26780 48.649 74 36 1 10 83 127 198 5.33e-16 77.8
MS.gene96777.t1 AT3G09370 50.000 68 34 0 16 83 168 235 1.28e-15 78.6
MS.gene96777.t1 AT5G11050 45.946 74 38 1 10 83 134 205 1.30e-15 78.2
MS.gene96777.t1 AT3G09370 50.000 68 34 0 16 83 163 230 1.30e-15 78.6
MS.gene96777.t1 AT3G09370 50.000 68 34 0 16 83 176 243 1.66e-15 78.2
MS.gene96777.t1 AT4G32730 46.377 69 37 0 16 84 120 188 3.44e-15 77.8
MS.gene96777.t1 AT4G32730 46.377 69 37 0 16 84 120 188 3.53e-15 77.8
MS.gene96777.t1 AT4G32730 46.377 69 37 0 16 84 120 188 3.53e-15 77.8
MS.gene96777.t1 AT4G32730 46.377 69 37 0 16 84 120 188 3.53e-15 77.8
MS.gene96777.t1 AT4G32730 46.377 69 37 0 16 84 120 188 3.53e-15 77.8
MS.gene96777.t1 AT1G74650 76.190 42 10 0 46 87 2 43 4.80e-15 74.7
MS.gene96777.t1 AT4G33450 45.588 68 37 0 16 83 52 119 6.05e-15 74.3
MS.gene96777.t1 AT3G28910 68.889 45 14 0 46 90 2 46 1.07e-14 73.6
MS.gene96777.t1 AT1G73410 50.000 68 34 0 16 83 39 106 2.35e-14 72.4
MS.gene96777.t1 AT1G73410 50.000 68 34 0 16 83 39 106 3.27e-14 71.2
MS.gene96777.t1 AT3G29020 36.634 101 53 2 16 105 98 198 3.49e-14 72.0
MS.gene96777.t1 AT5G11510 44.928 69 38 0 16 84 114 182 3.80e-14 74.7
MS.gene96777.t1 AT5G11510 44.928 69 38 0 16 84 114 182 3.80e-14 74.7
MS.gene96777.t1 AT5G11510 44.928 69 38 0 16 84 114 182 3.80e-14 74.7
MS.gene96777.t1 AT5G40430 39.726 73 44 0 16 88 86 158 4.54e-14 72.0
MS.gene96777.t1 AT5G11510 44.928 69 38 0 16 84 114 182 4.70e-14 74.3
MS.gene96777.t1 AT5G11510 44.928 69 38 0 16 84 114 182 4.94e-14 73.9
MS.gene96777.t1 AT3G29020 36.364 99 52 2 16 103 100 198 6.98e-14 72.0
MS.gene96777.t1 AT5G17800 44.286 70 39 0 14 83 124 193 1.23e-13 71.6
MS.gene96777.t1 AT5G59780 65.116 43 15 0 41 83 4 46 1.76e-13 68.6
MS.gene96777.t1 AT4G00540 45.833 72 39 0 16 87 139 210 2.29e-13 71.2
MS.gene96777.t1 AT1G74430 57.692 52 22 0 45 96 8 59 2.54e-13 68.6
MS.gene96777.t1 AT3G46130 65.116 43 15 0 41 83 4 46 2.73e-13 68.6
MS.gene96777.t1 AT4G00540 45.833 72 39 0 16 87 137 208 2.78e-13 71.2
MS.gene96777.t1 AT4G25560 64.444 45 16 0 39 83 3 47 3.11e-13 68.9
MS.gene96777.t1 AT1G22640 67.500 40 13 0 56 95 16 55 7.22e-13 67.0
MS.gene96777.t1 AT5G39700 43.662 71 39 1 16 86 89 158 2.38e-12 65.5
MS.gene96777.t1 AT5G14340 51.923 52 24 1 49 99 2 53 4.22e-12 64.7
MS.gene96777.t1 AT2G02820 42.647 68 39 0 16 83 63 130 1.91e-11 65.5
MS.gene96777.t1 AT2G02820 42.647 68 39 0 16 83 63 130 1.97e-11 65.9
MS.gene96777.t1 AT2G02820 44.615 65 36 0 19 83 66 130 2.63e-11 64.7
MS.gene96777.t1 AT1G66380 55.932 59 26 0 2 60 30 88 3.46e-11 60.1
MS.gene96777.t1 AT2G37630 40.580 69 41 0 14 82 38 106 3.56e-11 64.3
MS.gene96777.t1 AT1G14350 43.077 65 37 0 19 83 61 125 4.47e-11 64.3
MS.gene96777.t1 AT1G14350 43.077 65 37 0 19 83 61 125 4.47e-11 64.3

Find 74 sgRNAs with CRISPR-Local

Find 122 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTTGAACTTTCAGTTTAT+TGG 0.159060 4.3:+28186812 None:intergenic
ATTTCATTGTCTGTTCTTCT+TGG 0.170863 4.3:+28187029 None:intergenic
ATTCAACTTCATGCCCTTCT+TGG 0.237204 4.3:-28187855 MS.gene96777:CDS
CCAGGTGAATGATCCTGTTT+TGG 0.246738 4.3:+28186936 None:intergenic
TCATTGGTGTTGTTGGTTAA+AGG 0.270364 4.3:+28186441 None:intergenic
TGAAGAACATTTGTTGAAAT+AGG 0.280127 4.3:+28186249 None:intergenic
TCGAGGAGAATAAGCATTAT+TGG 0.289886 4.3:-28186176 MS.gene96777:CDS
AAGAGGAAAGTTTAGTTTGC+AGG 0.291765 4.3:-28187892 MS.gene96777:CDS
GTTATTGTTTGAGTCATCTT+TGG 0.317182 4.3:+28186641 None:intergenic
TCAGCAAGATGATGATATTA+TGG 0.317696 4.3:-28186328 MS.gene96777:CDS
ATCATCATCATTGGTGTTGT+TGG 0.339289 4.3:+28186434 None:intergenic
GGAAGTAAACTTTGATTGAA+TGG 0.339722 4.3:+28186462 None:intergenic
CATTATTGGAATAGCATACT+TGG 0.366602 4.3:-28186162 MS.gene96777:CDS
ACTGAGGTTAGCTGAGTCTT+TGG 0.373102 4.3:+28186893 None:intergenic
ATGAACTTTGCCATGCTTTG+AGG 0.375041 4.3:+28186688 None:intergenic
AAAGGAAGCAAGGTTGTTCC+AGG 0.376507 4.3:+28186540 None:intergenic
TTGGAATAGCATACTTGGTT+TGG 0.378256 4.3:-28186157 MS.gene96777:CDS
TCAATATTATTGTTTGTCAT+AGG 0.380905 4.3:+28186486 None:intergenic
TACTGAGAAGTGGAACTTCC+AGG 0.387490 4.3:+28186918 None:intergenic
TCTTTGGTTGTTGATGTTGT+TGG 0.388915 4.3:+28186657 None:intergenic
CCAATGATGATGATGAGATA+TGG 0.393529 4.3:-28186425 MS.gene96777:CDS
TTCATGCCCTTCTTGGAAAC+AGG 0.394656 4.3:-28187848 MS.gene96777:intron
AAGAATTTGGTCATGGAAGC+TGG 0.395565 4.3:-28188107 None:intergenic
CGTGCATTGCCTGCCAAAGC+TGG 0.405442 4.3:-28188084 MS.gene96777:CDS
TCAAAGCATGGCAAAGTTCA+TGG 0.411605 4.3:-28186686 MS.gene96777:CDS
CCATATCTCATCATCATCAT+TGG 0.411752 4.3:+28186425 None:intergenic
CCTCAGTCACATGGCTCAAT+GGG 0.411999 4.3:-28186877 MS.gene96777:CDS
TGGAGATTCAAGATCATCAT+TGG 0.412198 4.3:+28186581 None:intergenic
TTTGTCATAGGAGCAGAAAC+TGG 0.418271 4.3:+28186498 None:intergenic
ACCTCAGTCACATGGCTCAA+TGG 0.425348 4.3:-28186878 MS.gene96777:CDS
TATTAAATACCAACCAGCTT+TGG 0.425638 4.3:+28188071 None:intergenic
TCTTGGAAGTTGAGCTGCTA+TGG 0.431859 4.3:+28187046 None:intergenic
TACAACTCACAAACCAAAAC+AGG 0.434996 4.3:-28186949 MS.gene96777:CDS
ACATCCACTTTGAACTTCCC+TGG 0.436918 4.3:-28186558 MS.gene96777:CDS
TCAATGGGAAAGTGCTCGTT+TGG 0.449605 4.3:-28186862 MS.gene96777:CDS
ACAATGAAATCAAGAACTAC+TGG 0.450211 4.3:-28187016 MS.gene96777:CDS
CAAGAAAAGACTAACAAGAA+TGG 0.454130 4.3:-28186982 MS.gene96777:CDS
AGAGGAACAGAAAGAGGTAA+AGG 0.463876 4.3:+28186522 None:intergenic
AAGAAAAGACTAACAAGAAT+GGG 0.464161 4.3:-28186981 MS.gene96777:CDS
AATGTTCTTCAAGTTCTTGA+GGG 0.469624 4.3:-28186237 MS.gene96777:CDS
AAAAGTCTTGCAGGTGGCTG+TGG 0.483350 4.3:+28186765 None:intergenic
TATTTACCTGTTTCCAAGAA+GGG 0.499572 4.3:+28187842 None:intergenic
AAATACCAACCAGCTTTGGC+AGG 0.509951 4.3:+28188075 None:intergenic
AAATGTTCTTCAAGTTCTTG+AGG 0.511287 4.3:-28186238 MS.gene96777:CDS
AGAACATTTGTTGAAATAGG+AGG 0.514999 4.3:+28186252 None:intergenic
GAAAGAGCTGCAGACTAAGA+TGG 0.517757 4.3:-28187941 MS.gene96777:CDS
CCAAAACAGGATCATTCACC+TGG 0.519292 4.3:-28186936 MS.gene96777:CDS
ACTGGAAGAGGAACAGAAAG+AGG 0.527531 4.3:+28186516 None:intergenic
TGATGATATTATGGCGGCTG+TGG 0.535815 4.3:-28186319 MS.gene96777:CDS
GTATTTACCTGTTTCCAAGA+AGG 0.550074 4.3:+28187841 None:intergenic
GGAAGTGAAGGTTGAATCAA+TGG 0.554146 4.3:+28186726 None:intergenic
GGGAAGTTCAAAGTGGATGT+TGG 0.558335 4.3:+28186561 None:intergenic
TCAAGACAAGGTGGAAGTGA+AGG 0.564353 4.3:+28186714 None:intergenic
CCCATTGAGCCATGTGACTG+AGG 0.574906 4.3:+28186877 None:intergenic
AGAAAGAGGTAAAGGAAGCA+AGG 0.575341 4.3:+28186530 None:intergenic
GTCTTTGGTGTACTGAGAAG+TGG 0.581157 4.3:+28186908 None:intergenic
CTTGAGGGTGGTGATCAAGA+TGG 0.592637 4.3:-28186222 MS.gene96777:CDS
CTCAGCTAACCTCAGTCACA+TGG 0.592879 4.3:-28186886 MS.gene96777:CDS
GTTCTTCAAGTTCTTGAGGG+TGG 0.594370 4.3:-28186234 MS.gene96777:CDS
CATAACACAGAAGGTGGTCA+TGG 0.605129 4.3:-28186381 MS.gene96777:CDS
ATAGGAGCAGAAACTGGAAG+AGG 0.612587 4.3:+28186504 None:intergenic
CATTGCCTGCCAAAGCTGGT+TGG 0.616050 4.3:-28188080 MS.gene96777:intron
TTAACTAAGCATAACACAGA+AGG 0.617178 4.3:-28186390 MS.gene96777:CDS
GTCTTGATATCCTCAAAGCA+TGG 0.625732 4.3:-28186698 MS.gene96777:CDS
ACTAAGCATAACACAGAAGG+TGG 0.627492 4.3:-28186387 MS.gene96777:CDS
GTGGAAGCATTTAGAGCTAG+CGG 0.641867 4.3:-28186300 MS.gene96777:CDS
TGTTCCAGGGAAGTTCAAAG+TGG 0.664387 4.3:+28186554 None:intergenic
AAGGAAGCAAGGTTGTTCCA+GGG 0.687540 4.3:+28186541 None:intergenic
GAAGCATTTAGAGCTAGCGG+AGG 0.688570 4.3:-28186297 MS.gene96777:CDS
GCAAGATGATGATATTATGG+CGG 0.691629 4.3:-28186325 MS.gene96777:CDS
TTGAGGATATCAAGACAAGG+TGG 0.701426 4.3:+28186705 None:intergenic
TGAATCTGATGATATGAACA+TGG 0.724861 4.3:-28186130 MS.gene96777:CDS
GCTTTGAGGATATCAAGACA+AGG 0.746052 4.3:+28186702 None:intergenic
AATGTGTAACGTGAATCTCG+AGG 0.750691 4.3:-28186193 MS.gene96777:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GAAAAAATAACAATTAATAG+TGG - chr4.3:28186722-28186741 MS.gene96777:CDS 15.0%
!! TCAATATTATTGTTTGTCAT+AGG + chr4.3:28187734-28187753 None:intergenic 20.0%
!! TTTGATGAAATATTGAAACT+AGG + chr4.3:28186611-28186630 None:intergenic 20.0%
!!! GTACTATTACTTTTTTTTAG+TGG - chr4.3:28187002-28187021 MS.gene96777:CDS 20.0%
!!! GTATATGTAGCTTTTATATA+TGG - chr4.3:28186517-28186536 MS.gene96777:CDS 20.0%
! AAAAAAAAACTTCCCAAGTT+AGG + chr4.3:28186462-28186481 None:intergenic 25.0%
! AAAAAAAACTTCCCAAGTTA+GGG + chr4.3:28186461-28186480 None:intergenic 25.0%
! AAGAAAAGACTAACAAGAAT+GGG - chr4.3:28187236-28187255 MS.gene96777:intron 25.0%
! AGTAAGCAATCATTTATATG+TGG + chr4.3:28186427-28186446 None:intergenic 25.0%
! TCTTTGAACTTTCAGTTTAT+TGG + chr4.3:28187408-28187427 None:intergenic 25.0%
!! TGAAGAACATTTGTTGAAAT+AGG + chr4.3:28187971-28187990 None:intergenic 25.0%
!!! AACTTGGGAAGTTTTTTTTT+AGG - chr4.3:28186462-28186481 MS.gene96777:CDS 25.0%
AAAAAGGACATGTTTCTCTT+AGG - chr4.3:28186851-28186870 MS.gene96777:CDS 30.0%
ACAATGAAATCAAGAACTAC+TGG - chr4.3:28187201-28187220 MS.gene96777:intron 30.0%
ATTTCATTGTCTGTTCTTCT+TGG + chr4.3:28187191-28187210 None:intergenic 30.0%
CAAGAAAAGACTAACAAGAA+TGG - chr4.3:28187235-28187254 MS.gene96777:intron 30.0%
CATCACTATGTAATCATCTA+CGG + chr4.3:28187094-28187113 None:intergenic 30.0%
CATTATTGGAATAGCATACT+TGG - chr4.3:28188055-28188074 MS.gene96777:intron 30.0%
GGAAGTAAACTTTGATTGAA+TGG + chr4.3:28187758-28187777 None:intergenic 30.0%
GTTATTGTTTGAGTCATCTT+TGG + chr4.3:28187579-28187598 None:intergenic 30.0%
TATTAAATACCAACCAGCTT+TGG + chr4.3:28186149-28186168 None:intergenic 30.0%
TATTTACCTGTTTCCAAGAA+GGG + chr4.3:28186378-28186397 None:intergenic 30.0%
TCAGCAAGATGATGATATTA+TGG - chr4.3:28187889-28187908 MS.gene96777:CDS 30.0%
TCCAAACGAAAGAAATTTAC+TGG + chr4.3:28186682-28186701 None:intergenic 30.0%
TCCAGTAAATTTCTTTCGTT+TGG - chr4.3:28186678-28186697 MS.gene96777:CDS 30.0%
TGAATCTGATGATATGAACA+TGG - chr4.3:28188087-28188106 MS.gene96777:CDS 30.0%
TTAACTAAGCATAACACAGA+AGG - chr4.3:28187827-28187846 MS.gene96777:intron 30.0%
! AAATGTTCTTCAAGTTCTTG+AGG - chr4.3:28187979-28187998 MS.gene96777:intron 30.0%
! AACTTTCCTCTTTTTATGTC+TGG + chr4.3:28186317-28186336 None:intergenic 30.0%
! AATGTTCTTCAAGTTCTTGA+GGG - chr4.3:28187980-28187999 MS.gene96777:intron 30.0%
! AGAACATTTGTTGAAATAGG+AGG + chr4.3:28187968-28187987 None:intergenic 30.0%
! TTTTATAAGTTGCACGTGTA+AGG + chr4.3:28186948-28186967 None:intergenic 30.0%
!!! TTCTTGTTAGTCTTTTCTTG+AGG + chr4.3:28187235-28187254 None:intergenic 30.0%
!!! TTTTTTTAGGAGTCCTAACT+TGG - chr4.3:28186475-28186494 MS.gene96777:CDS 30.0%
AAATACGTCAAGACCTTGAA+CGG + chr4.3:28186893-28186912 None:intergenic 35.0%
AGAGACTATAAACAGCATGT+TGG + chr4.3:28186559-28186578 None:intergenic 35.0%
AGCTACATATACTACCATAG+TGG + chr4.3:28186509-28186528 None:intergenic 35.0%
ATTGATTATGTGCACACAGA+TGG - chr4.3:28187144-28187163 MS.gene96777:intron 35.0%
ATTTATATGTGGTCTGCTAC+TGG + chr4.3:28186416-28186435 None:intergenic 35.0%
CATTAATAACTGTAGCAGTG+AGG - chr4.3:28187037-28187056 MS.gene96777:CDS 35.0%
CCATATCTCATCATCATCAT+TGG + chr4.3:28187795-28187814 None:intergenic 35.0%
CTCACTGCTACAGTTATTAA+TGG + chr4.3:28187039-28187058 None:intergenic 35.0%
GCAAGATGATGATATTATGG+CGG - chr4.3:28187892-28187911 MS.gene96777:CDS 35.0%
GTATTTACCTGTTTCCAAGA+AGG + chr4.3:28186379-28186398 None:intergenic 35.0%
TAAAAAGGGCTTCAAAGATG+TGG - chr4.3:28186254-28186273 MS.gene96777:CDS 35.0%
TACAACTCACAAACCAAAAC+AGG - chr4.3:28187268-28187287 MS.gene96777:intron 35.0%
TCGAGGAGAATAAGCATTAT+TGG - chr4.3:28188041-28188060 MS.gene96777:intron 35.0%
TCTTTGGTTGTTGATGTTGT+TGG + chr4.3:28187563-28187582 None:intergenic 35.0%
TGGAGATTCAAGATCATCAT+TGG + chr4.3:28187639-28187658 None:intergenic 35.0%
TTGGAATAGCATACTTGGTT+TGG - chr4.3:28188060-28188079 MS.gene96777:intron 35.0%
TTGTTGAGAAAAAGTCTTGC+AGG + chr4.3:28187464-28187483 None:intergenic 35.0%
! CCAATGATGATGATGAGATA+TGG - chr4.3:28187792-28187811 MS.gene96777:intron 35.0%
! TTCCTCTTTTTATGTCTGGT+CGG + chr4.3:28186313-28186332 None:intergenic 35.0%
!! AAGAGGAAAGTTTAGTTTGC+AGG - chr4.3:28186325-28186344 MS.gene96777:CDS 35.0%
!! ATCATCATCATTGGTGTTGT+TGG + chr4.3:28187786-28187805 None:intergenic 35.0%
!! TCATTGGTGTTGTTGGTTAA+AGG + chr4.3:28187779-28187798 None:intergenic 35.0%
!!! GTTTTGGTTTGTGAGTTGTA+GGG + chr4.3:28187268-28187287 None:intergenic 35.0%
!!! TGTTTTGGTTTGTGAGTTGT+AGG + chr4.3:28187269-28187288 None:intergenic 35.0%
AAGGACATGTTTCTCTTAGG+AGG - chr4.3:28186854-28186873 MS.gene96777:CDS 40.0%
AATGTGTAACGTGAATCTCG+AGG - chr4.3:28188024-28188043 MS.gene96777:intron 40.0%
ACTAAGCATAACACAGAAGG+TGG - chr4.3:28187830-28187849 MS.gene96777:intron 40.0%
ACTAGTACTCTCCCTAACTT+GGG - chr4.3:28186447-28186466 MS.gene96777:CDS 40.0%
ACTTGGAAAGTTGACCACTA+TGG - chr4.3:28186492-28186511 MS.gene96777:CDS 40.0%
AGAAAGAGGTAAAGGAAGCA+AGG + chr4.3:28187690-28187709 None:intergenic 40.0%
AGAGGAACAGAAAGAGGTAA+AGG + chr4.3:28187698-28187717 None:intergenic 40.0%
AGTGGTCAACTTTCCAAGTT+AGG + chr4.3:28186491-28186510 None:intergenic 40.0%
ATGAACTTTGCCATGCTTTG+AGG + chr4.3:28187532-28187551 None:intergenic 40.0%
ATTCAACTTCATGCCCTTCT+TGG - chr4.3:28186362-28186381 MS.gene96777:CDS 40.0%
CTGCTACTGGAAAAGGTAAA+GGG + chr4.3:28186403-28186422 None:intergenic 40.0%
GGAAGTGAAGGTTGAATCAA+TGG + chr4.3:28187494-28187513 None:intergenic 40.0%
GTCTTGATATCCTCAAAGCA+TGG - chr4.3:28187519-28187538 MS.gene96777:intron 40.0%
GTTCAAGGTCTTGACGTATT+TGG - chr4.3:28186892-28186911 MS.gene96777:CDS 40.0%
TACTAGTACTCTCCCTAACT+TGG - chr4.3:28186446-28186465 MS.gene96777:CDS 40.0%
TAGTGGTAAAACGCACTTAG+TGG - chr4.3:28186739-28186758 MS.gene96777:CDS 40.0%
TCAAAGCATGGCAAAGTTCA+TGG - chr4.3:28187531-28187550 MS.gene96777:intron 40.0%
TCTGCTACTGGAAAAGGTAA+AGG + chr4.3:28186404-28186423 None:intergenic 40.0%
TTGAGAAAAAGTCTTGCAGG+TGG + chr4.3:28187461-28187480 None:intergenic 40.0%
TTGAGGATATCAAGACAAGG+TGG + chr4.3:28187515-28187534 None:intergenic 40.0%
TTTGTCATAGGAGCAGAAAC+TGG + chr4.3:28187722-28187741 None:intergenic 40.0%
!! GCTTTGAGGATATCAAGACA+AGG + chr4.3:28187518-28187537 None:intergenic 40.0%
AAAGGAAGCAAGGTTGTTCC+AGG + chr4.3:28187680-28187699 None:intergenic 45.0%
AAGGAAGCAAGGTTGTTCCA+GGG + chr4.3:28187679-28187698 None:intergenic 45.0%
ACATCCACTTTGAACTTCCC+TGG - chr4.3:28187659-28187678 MS.gene96777:intron 45.0%
ACTGGAAGAGGAACAGAAAG+AGG + chr4.3:28187704-28187723 None:intergenic 45.0%
AGCAGTGAGGACTACAGTAT+AGG - chr4.3:28187050-28187069 MS.gene96777:CDS 45.0%
ATAGGAGCAGAAACTGGAAG+AGG + chr4.3:28187716-28187735 None:intergenic 45.0%
ATGTGGTCTGCTACTGGAAA+AGG + chr4.3:28186410-28186429 None:intergenic 45.0%
CATAACACAGAAGGTGGTCA+TGG - chr4.3:28187836-28187855 MS.gene96777:intron 45.0%
CCAAAACAGGATCATTCACC+TGG - chr4.3:28187281-28187300 MS.gene96777:intron 45.0%
CTCCGACCAGACATAAAAAG+AGG - chr4.3:28186308-28186327 MS.gene96777:CDS 45.0%
GAAAGAGCTGCAGACTAAGA+TGG - chr4.3:28186276-28186295 MS.gene96777:CDS 45.0%
GGGAAGTTCAAAGTGGATGT+TGG + chr4.3:28187659-28187678 None:intergenic 45.0%
GGTAAAACGCACTTAGTGGT+GGG - chr4.3:28186743-28186762 MS.gene96777:CDS 45.0%
TACTGAGAAGTGGAACTTCC+AGG + chr4.3:28187302-28187321 None:intergenic 45.0%
TCAAGACAAGGTGGAAGTGA+AGG + chr4.3:28187506-28187525 None:intergenic 45.0%
TCTTGGAAGTTGAGCTGCTA+TGG + chr4.3:28187174-28187193 None:intergenic 45.0%
TGATGATATTATGGCGGCTG+TGG - chr4.3:28187898-28187917 MS.gene96777:CDS 45.0%
TGGTAAAACGCACTTAGTGG+TGG - chr4.3:28186742-28186761 MS.gene96777:CDS 45.0%
TGTTCCAGGGAAGTTCAAAG+TGG + chr4.3:28187666-28187685 None:intergenic 45.0%
TTCATGCCCTTCTTGGAAAC+AGG - chr4.3:28186369-28186388 MS.gene96777:CDS 45.0%
! AAATACCAACCAGCTTTGGC+AGG + chr4.3:28186145-28186164 None:intergenic 45.0%
! ACTGAGGTTAGCTGAGTCTT+TGG + chr4.3:28187327-28187346 None:intergenic 45.0%
! CCAGGTGAATGATCCTGTTT+TGG + chr4.3:28187284-28187303 None:intergenic 45.0%
! CTCTTTTTATGTCTGGTCGG+AGG + chr4.3:28186310-28186329 None:intergenic 45.0%
! GTCTTTGGTGTACTGAGAAG+TGG + chr4.3:28187312-28187331 None:intergenic 45.0%
! GTTCTTCAAGTTCTTGAGGG+TGG - chr4.3:28187983-28188002 MS.gene96777:intron 45.0%
!! GTGGAAGCATTTAGAGCTAG+CGG - chr4.3:28187917-28187936 MS.gene96777:CDS 45.0%
!! TCAATGGGAAAGTGCTCGTT+TGG - chr4.3:28187355-28187374 MS.gene96777:intron 45.0%
!!! ATAACTTTTTATAATAAAAA+AGG - chr4.3:28186835-28186854 MS.gene96777:CDS 5.0%
!!! ATTTACATTTTTTATAAAAA+GGG - chr4.3:28186240-28186259 MS.gene96777:CDS 5.0%
!!! TATTTACATTTTTTATAAAA+AGG - chr4.3:28186239-28186258 MS.gene96777:CDS 5.0%
AAAAGTCTTGCAGGTGGCTG+TGG + chr4.3:28187455-28187474 None:intergenic 50.0%
ACCTCAGTCACATGGCTCAA+TGG - chr4.3:28187339-28187358 MS.gene96777:intron 50.0%
CAGTGCTACATGTCCGTTCA+AGG - chr4.3:28186877-28186896 MS.gene96777:CDS 50.0%
CCTCAGTCACATGGCTCAAT+GGG - chr4.3:28187340-28187359 MS.gene96777:intron 50.0%
CTCAGCTAACCTCAGTCACA+TGG - chr4.3:28187331-28187350 MS.gene96777:intron 50.0%
CTTGAGGGTGGTGATCAAGA+TGG - chr4.3:28187995-28188014 MS.gene96777:intron 50.0%
! GAAGCATTTAGAGCTAGCGG+AGG - chr4.3:28187920-28187939 MS.gene96777:CDS 50.0%
CATTGCCTGCCAAAGCTGGT+TGG - chr4.3:28186137-28186156 MS.gene96777:CDS 55.0%
CCCATTGAGCCATGTGACTG+AGG + chr4.3:28187343-28187362 None:intergenic 55.0%
!! TGCAGGTGGCTGTGGTTTTG+AGG + chr4.3:28187447-28187466 None:intergenic 55.0%
CGTGCATTGCCTGCCAAAGC+TGG - chr4.3:28186133-28186152 MS.gene96777:CDS 60.0%


Chromosome Type Strat End Strand Name
chr4.3 gene 28186122 28188117 28186122 ID=MS.gene96777
chr4.3 mRNA 28186122 28188117 28186122 ID=MS.gene96777.t1;Parent=MS.gene96777
chr4.3 exon 28188081 28188117 28188081 ID=MS.gene96777.t1.exon1;Parent=MS.gene96777.t1
chr4.3 CDS 28188081 28188117 28188081 ID=cds.MS.gene96777.t1;Parent=MS.gene96777.t1
chr4.3 exon 28187849 28187978 28187849 ID=MS.gene96777.t1.exon2;Parent=MS.gene96777.t1
chr4.3 CDS 28187849 28187978 28187849 ID=cds.MS.gene96777.t1;Parent=MS.gene96777.t1
chr4.3 exon 28186122 28187076 28186122 ID=MS.gene96777.t1.exon3;Parent=MS.gene96777.t1
chr4.3 CDS 28186122 28187076 28186122 ID=cds.MS.gene96777.t1;Parent=MS.gene96777.t1
Gene Sequence

>MS.gene96777

ATGGAAGCTGGCGTGCATTGCCTGCCAAAGCTGGTTGGTATTTAATATATTTTTCTTCAAGATATGCATATGATAATATATGTTTTGTGTATAGTTTATTTTTTTTTTTAACAAGTTTATTTACATTTTTTATAAAAAGGGCTTCAAAGATGTGGAAAGAGCTGCAGACTAAGATGGACTAACTACCTCCGACCAGACATAAAAAGAGGAAAGTTTAGTTTGCAGGAAGAGCAAACTATTATTCAACTTCATGCCCTTCTTGGAAACAGGTAAATACACCCTTTACCTTTTCCAGTAGCAGACCACATATAAATGATTGCTTACTACTAGTACTCTCCCTAACTTGGGAAGTTTTTTTTTAGGAGTCCTAACTTGGAAAGTTGACCACTATGGTAGTATATGTAGCTTTTATATATGGATATATGTTGCAACAACCAACATGCTGTTTATAGTCTCTCAAAAGAGTCTTAACTTAGAACAAAAAGTCCTAGTTTCAATATTTCATCAAAAATCTAAATTTAAGTTTAGAGAATTAAATTATTTCTCTCTCTTAAGATCCAGTAAATTTCTTTCGTTTGGAAAGATAAACACACAAAAATTGAAAAAATAACAATTAATAGTGGTAAAACGCACTTAGTGGTGGGATATATTATCTATTTTTTGTGTATATCTTTCTAAATGACATTAGATATAATCAATATTTTGTATCTATAATAACTTTTTATAATAAAAAAGGACATGTTTCTCTTAGGAGGCAGTGCTACATGTCCGTTCAAGGTCTTGACGTATTTGGTTCTTAAGTTTTGCATTTGATATAACTCATCCTTACACGTGCAACTTATAAAATGAATATGATGTCATTTTTTATTACTCTTTTCAAGTACTATTACTTTTTTTTAGTGGCTTAAATTTTTCCATTAATAACTGTAGCAGTGAGGACTACAGTATAGGAGTACAATTTAACTAACACCGTAGATGATTACATAGTGATGTGTAGATGATTTGAGTATGTTTTTGTTATGATTGATTATGTGCACACAGATGGTCAGCCATAGCAGCTCAACTTCCAAGAAGAACAGACAATGAAATCAAGAACTACTGGAACACACACCTCAAGAAAAGACTAACAAGAATGGGAATAGACCCTACAACTCACAAACCAAAACAGGATCATTCACCTGGAAGTTCCACTTCTCAGTACACCAAAGACTCAGCTAACCTCAGTCACATGGCTCAATGGGAAAGTGCTCGTTTGGAAGCAGAAGCAAGACTTGTTAGAGAAACCAATAAACTGAAAGTTCAAAGACAACTTGAGTTTGAATCCTCAAAACCACAGCCACCTGCAAGACTTTTTCTCAACAAAATCACACCATTGATTCAACCTTCACTTCCACCTTGTCTTGATATCCTCAAAGCATGGCAAAGTTCATGGTCTAAACCAACAACATCAACAACCAAAGATGACTCAAACAATAACAACAACAAAATGCATAGTATGTATGCTATGATGTTATCCAATGATGATCTTGAATCTCCAACATCCACTTTGAACTTCCCTGGAACAACCTTGCTTCCTTTACCTCTTTCTGTTCCTCTTCCAGTTTCTGCTCCTATGACAAACAATAATATTGAACCATTCAATCAAAGTTTACTTCCTTTAACCAACAACACCAATGATGATGATGAGATATGGAAACAATTCAATTTAACTAAGCATAACACAGAAGGTGGTCATGGTCATGATAACAATAACACTATGTTGAACTTTCAGCAAGATGATGATATTATGGCGGCTGTGGAAGCATTTAGAGCTAGCGGAGGATTTGATAATAATATCAATACACCTCCTATTTCAACAAATGTTCTTCAAGTTCTTGAGGGTGGTGATCAAGATGGAAGCATAATGTGTAACGTGAATCTCGAGGAGAATAAGCATTATTGGAATAGCATACTTGGTTTGGTTAATGAATCTGATGATATGAACATGGTCCTATAA
Protein sequence

>MS.gene96777.t1

MEAGVHCLPKLVGLQRCGKSCRLRWTNYLRPDIKRGKFSLQEEQTIIQLHALLGNRWSAIAAQLPRRTDNEIKNYWNTHLKKRLTRMGIDPTTHKPKQDHSPGSSTSQYTKDSANLSHMAQWESARLEAEARLVRETNKLKVQRQLEFESSKPQPPARLFLNKITPLIQPSLPPCLDILKAWQSSWSKPTTSTTKDDSNNNNNKMHSMYAMMLSNDDLESPTSTLNFPGTTLLPLPLSVPLPVSAPMTNNNIEPFNQSLLPLTNNTNDDDEIWKQFNLTKHNTEGGHGHDNNNTMLNFQQDDDIMAAVEAFRASGGFDNNINTPPISTNVLQVLEGGDQDGSIMCNVNLEENKHYWNSILGLVNESDDMNMVL