AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene96858

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene96858.t1 MTR_7g062220 85.174 317 13 1 1 283 1 317 0.0 550
MS.gene96858.t1 MTR_5g043880 41.509 159 74 5 90 239 124 272 1.95e-25 102
MS.gene96858.t1 MTR_4g094588 71.930 57 16 0 90 146 178 234 3.27e-23 97.4
MS.gene96858.t1 MTR_7g109800 38.272 162 74 6 90 238 145 293 1.21e-22 95.1
MS.gene96858.t1 MTR_2g033820 52.941 85 29 1 90 163 203 287 1.42e-22 96.3
MS.gene96858.t1 MTR_1g086790 66.667 57 19 0 90 146 158 214 4.86e-22 94.0
MS.gene96858.t1 MTR_1g015140 64.912 57 20 0 90 146 102 158 1.07e-21 89.4
MS.gene96858.t1 MTR_5g091390 66.667 57 19 0 90 146 157 213 2.55e-21 91.7
MS.gene96858.t1 MTR_8g092140 64.912 57 20 0 90 146 160 216 3.66e-21 89.7
MS.gene96858.t1 MTR_3g104750 63.158 57 21 0 90 146 104 160 4.09e-21 87.8
MS.gene96858.t1 MTR_5g042920 36.842 152 77 2 1 146 238 376 6.86e-21 92.0
MS.gene96858.t1 MTR_5g042920 59.322 59 23 1 89 147 150 207 8.87e-15 74.3
MS.gene96858.t1 MTR_3g031220 64.912 57 20 0 90 146 365 421 9.23e-21 92.0
MS.gene96858.t1 MTR_3g031220 59.649 57 22 1 90 146 198 253 1.14e-14 73.9
MS.gene96858.t1 MTR_3g095040 59.322 59 24 0 88 146 116 174 9.66e-21 88.2
MS.gene96858.t1 MTR_7g028415 61.404 57 22 0 90 146 93 149 1.08e-20 87.0
MS.gene96858.t1 MTR_7g028710 61.404 57 22 0 90 146 93 149 1.08e-20 87.0
MS.gene96858.t1 MTR_5g094430 63.158 57 21 0 90 146 252 308 1.13e-20 91.3
MS.gene96858.t1 MTR_5g094430 57.895 57 23 1 90 146 88 143 1.73e-13 70.5
MS.gene96858.t1 MTR_5g094430 63.158 57 21 0 90 146 230 286 1.29e-20 91.3
MS.gene96858.t1 MTR_5g094430 57.895 57 23 1 90 146 66 121 2.23e-13 70.1
MS.gene96858.t1 MTR_3g095080 64.912 57 20 0 90 146 144 200 1.32e-20 88.2
MS.gene96858.t1 MTR_3g095080 64.912 57 20 0 90 146 168 224 1.34e-20 88.6
MS.gene96858.t1 MTR_5g094430 63.158 57 21 0 90 146 364 420 1.38e-20 91.7
MS.gene96858.t1 MTR_5g094430 57.895 57 23 1 90 146 200 255 2.01e-13 70.5
MS.gene96858.t1 MTR_3g056100 63.158 57 21 0 90 146 415 471 2.01e-20 91.3
MS.gene96858.t1 MTR_3g056100 45.882 85 38 2 69 146 215 298 1.14e-13 71.2
MS.gene96858.t1 MTR_3g056100 63.158 57 21 0 90 146 402 458 2.01e-20 91.3
MS.gene96858.t1 MTR_3g056100 45.882 85 38 2 69 146 215 298 1.19e-13 71.2
MS.gene96858.t1 MTR_3g056100 63.158 57 21 0 90 146 258 314 2.23e-20 90.5
MS.gene96858.t1 MTR_3g056100 45.882 85 38 2 69 146 71 154 1.58e-13 70.5
MS.gene96858.t1 MTR_3g056100 63.158 57 21 0 90 146 271 327 2.33e-20 90.5
MS.gene96858.t1 MTR_3g056100 45.882 85 38 2 69 146 71 154 1.57e-13 70.5
MS.gene96858.t1 MTR_7g079010 63.158 57 21 0 90 146 141 197 2.50e-20 87.4
MS.gene96858.t1 MTR_4g122530 61.017 59 23 0 90 148 208 266 6.69e-20 89.0
MS.gene96858.t1 MTR_3g009470 46.226 106 44 3 90 189 495 593 9.73e-20 89.4
MS.gene96858.t1 MTR_3g009470 51.429 70 33 1 81 150 271 339 3.15e-14 73.2
MS.gene96858.t1 MTR_5g074400 36.054 147 75 2 90 236 420 547 1.02e-19 89.4
MS.gene96858.t1 MTR_5g074400 63.158 57 20 1 90 146 243 298 5.17e-16 78.2
MS.gene96858.t1 MTR_7g011820 61.017 59 23 0 88 146 408 466 1.31e-19 88.6
MS.gene96858.t1 MTR_7g011820 56.667 60 21 2 89 146 227 283 3.29e-13 69.7
MS.gene96858.t1 MTR_8g007270 43.925 107 56 1 44 146 104 210 2.33e-19 84.7
MS.gene96858.t1 MTR_4g082580 59.322 59 24 0 88 146 276 334 4.34e-19 86.7
MS.gene96858.t1 MTR_4g082580 54.386 57 26 0 90 146 145 201 1.55e-14 73.6
MS.gene96858.t1 MTR_8g092010 55.932 59 26 0 88 146 106 164 4.77e-19 82.8
MS.gene96858.t1 MTR_5g097490 58.333 60 25 0 87 146 249 308 8.41e-19 85.9
MS.gene96858.t1 MTR_7g100510 47.674 86 42 2 61 146 335 417 1.65e-18 85.1
MS.gene96858.t1 MTR_7g100510 58.929 56 22 1 91 146 190 244 1.53e-13 70.5
MS.gene96858.t1 MTR_1g009613 44.444 90 44 3 61 146 232 319 1.73e-18 84.3
MS.gene96858.t1 MTR_4g130900 48.684 76 38 1 72 146 340 415 2.04e-18 85.1
MS.gene96858.t1 MTR_7g071120 59.649 57 23 0 90 146 324 380 4.54e-18 84.3
MS.gene96858.t1 MTR_7g071120 61.017 59 18 2 90 146 166 221 8.99e-16 77.4
MS.gene96858.t1 MTR_1g070455 49.367 79 36 2 76 150 276 354 1.02e-17 82.4
MS.gene96858.t1 MTR_4g013260 59.649 57 23 0 90 146 336 392 1.50e-17 82.8
MS.gene96858.t1 MTR_4g013260 59.649 57 23 0 90 146 184 240 3.70e-17 81.6
MS.gene96858.t1 MTR_3g106060 36.290 124 72 4 54 174 105 224 2.19e-17 80.5
MS.gene96858.t1 MTR_7g080020 57.895 57 24 0 90 146 493 549 2.48e-17 82.4
MS.gene96858.t1 MTR_7g080020 54.839 62 27 1 85 146 275 335 2.45e-13 70.5
MS.gene96858.t1 MTR_7g080000 57.895 57 24 0 90 146 432 488 2.78e-17 82.0
MS.gene96858.t1 MTR_7g080000 53.571 56 25 1 91 146 235 289 1.84e-11 64.7
MS.gene96858.t1 MTR_8g096730 50.877 57 28 0 90 146 70 126 3.31e-17 77.0
MS.gene96858.t1 MTR_7g109600 57.576 66 27 1 82 146 45 110 3.89e-17 79.3
MS.gene96858.t1 MTR_1g013760 49.333 75 37 1 91 164 141 215 4.74e-17 79.7
MS.gene96858.t1 MTR_4g127040 46.667 75 36 2 76 146 228 302 8.74e-17 79.3
MS.gene96858.t1 MTR_3g108960 43.373 83 43 2 72 150 293 375 9.51e-17 80.1
MS.gene96858.t1 MTR_0117s0040 43.182 88 44 3 65 146 44 131 1.29e-16 77.8
MS.gene96858.t1 MTR_8g087000 50.633 79 37 2 73 150 60 137 1.58e-16 77.4
MS.gene96858.t1 MTR_8g087000 46.739 92 46 3 61 150 46 136 1.79e-16 77.4
MS.gene96858.t1 MTR_8g028565 48.718 78 37 2 72 148 139 214 2.01e-16 78.6
MS.gene96858.t1 MTR_6g053200 44.872 78 42 1 70 146 310 387 2.90e-16 79.0
MS.gene96858.t1 MTR_5g016610 45.570 79 39 2 72 146 178 256 3.14e-16 77.0
MS.gene96858.t1 MTR_4g094908 36.719 128 54 3 46 146 196 323 3.23e-16 77.8
MS.gene96858.t1 MTR_2g105060 52.632 57 26 1 91 146 95 151 4.69e-16 76.3
MS.gene96858.t1 MTR_2g105060 52.632 57 26 1 91 146 170 226 5.53e-16 77.0
MS.gene96858.t1 MTR_1g077780 54.237 59 27 0 88 146 60 118 8.63e-16 73.2
MS.gene96858.t1 MTR_1g099600 53.968 63 28 1 85 146 180 242 1.04e-15 76.3
MS.gene96858.t1 MTR_2g032030 55.556 63 27 1 85 146 262 324 1.25e-15 76.6
MS.gene96858.t1 MTR_3g090860 44.554 101 47 3 51 144 92 190 1.35e-15 76.3
MS.gene96858.t1 MTR_6g086555 55.172 58 25 1 90 146 206 263 1.49e-15 76.6
MS.gene96858.t1 MTR_1g078260 56.897 58 24 1 90 146 247 304 1.58e-15 76.6
MS.gene96858.t1 MTR_2g024380 40.367 109 57 4 57 158 216 323 2.00e-15 76.3
MS.gene96858.t1 MTR_2g032030 55.556 63 27 1 85 146 262 324 2.40e-15 76.3
MS.gene96858.t1 MTR_4g107970 58.621 58 23 1 90 146 178 235 2.67e-15 75.9
MS.gene96858.t1 MTR_2g016770 54.098 61 27 1 91 150 36 96 2.80e-15 73.6
MS.gene96858.t1 MTR_4g107970 58.621 58 23 1 90 146 255 312 3.32e-15 75.9
MS.gene96858.t1 MTR_2g016770 54.098 61 27 1 91 150 28 88 3.68e-15 72.8
MS.gene96858.t1 MTR_2g088000 54.839 62 27 1 90 150 349 410 3.75e-15 75.9
MS.gene96858.t1 MTR_8g099350 57.377 61 23 1 87 144 129 189 4.45e-15 74.7
MS.gene96858.t1 MTR_7g009730 36.000 125 65 4 23 146 166 276 4.50e-15 75.5
MS.gene96858.t1 MTR_3g053330 54.098 61 27 1 91 150 252 312 5.67e-15 75.1
MS.gene96858.t1 MTR_7g117200 44.211 95 45 3 57 144 82 175 7.15e-15 73.9
MS.gene96858.t1 MTR_8g098945 53.226 62 28 1 86 146 125 186 8.13e-15 73.2
MS.gene96858.t1 MTR_4g132430 56.897 58 24 1 90 146 127 184 8.29e-15 73.9
MS.gene96858.t1 MTR_3g031220 59.649 57 22 1 90 146 198 253 8.46e-15 73.9
MS.gene96858.t1 MTR_4g094412 47.222 72 36 2 76 146 221 291 8.70e-15 74.3
MS.gene96858.t1 MTR_7g079040 33.537 164 87 6 88 240 152 304 9.00e-15 73.6
MS.gene96858.t1 MTR_4g094412 47.222 72 36 2 76 146 230 300 9.42e-15 74.3
MS.gene96858.t1 MTR_2g083870 57.895 57 23 1 91 146 81 137 1.21e-14 72.4
MS.gene96858.t1 MTR_4g132430 56.897 58 24 1 90 146 261 318 1.44e-14 73.9
MS.gene96858.t1 MTR_2g023930 56.140 57 24 1 91 146 306 362 2.56e-14 73.2
MS.gene96858.t1 MTR_7g110720 56.667 60 25 1 88 146 187 246 2.63e-14 72.8
MS.gene96858.t1 MTR_7g110720 56.667 60 25 1 88 146 214 273 2.63e-14 72.8
MS.gene96858.t1 MTR_4g007060 52.632 57 26 1 91 146 129 185 2.90e-14 71.6
MS.gene96858.t1 MTR_3g009470 51.429 70 33 1 81 150 271 339 3.04e-14 72.8
MS.gene96858.t1 MTR_5g067680 52.542 59 25 1 90 145 202 260 3.12e-14 72.4
MS.gene96858.t1 MTR_4g007060 52.632 57 26 1 91 146 163 219 3.47e-14 72.0
MS.gene96858.t1 MTR_8g067635 47.368 76 39 1 72 146 331 406 8.65e-14 71.6
MS.gene96858.t1 MTR_1g013790 50.877 57 27 1 91 146 102 158 1.09e-13 69.7
MS.gene96858.t1 MTR_2g024350 53.333 60 27 1 88 146 6 65 1.11e-13 69.3
MS.gene96858.t1 MTR_8g067650 53.333 60 27 1 88 146 337 396 5.57e-13 68.9
MS.gene96858.t1 MTR_2g045360 52.632 57 26 1 91 146 212 268 6.67e-13 68.6
MS.gene96858.t1 MTR_8g027860 44.737 76 35 2 76 144 118 193 4.11e-12 65.9
MS.gene96858.t1 MTR_8g069935 49.153 59 29 1 89 146 330 388 5.84e-12 65.9
MS.gene96858.t1 MTR_5g074200 50.000 58 28 1 90 147 220 276 9.15e-12 64.7
MS.gene96858.t1 MTR_2g075610 50.000 60 27 1 88 144 27 86 1.57e-11 62.4
MS.gene96858.t1 MTR_4g049760 50.877 57 27 1 91 146 291 347 1.85e-11 64.7
MS.gene96858.t1 MTR_8g005750 53.448 58 24 1 90 144 103 160 2.09e-11 63.5
MS.gene96858.t1 MTR_0002s1250 51.724 58 25 1 90 144 111 168 2.47e-11 63.2
MS.gene96858.t1 MTR_2g075750 50.000 60 27 1 88 144 26 85 3.55e-11 61.2
MS.gene96858.t1 MTR_2g075700 49.231 65 30 1 88 149 142 206 5.72e-11 62.4
MS.gene96858.t1 MTR_3g093830 52.632 57 24 1 91 144 128 184 6.71e-11 62.0
MS.gene96858.t1 MTR_7g073430 51.724 58 25 1 90 144 122 179 6.93e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene96858.t1 AT5G43290 46.277 188 84 7 63 241 87 266 2.82e-42 146
MS.gene96858.t1 AT1G69310 41.558 154 74 4 90 240 147 287 2.61e-28 110
MS.gene96858.t1 AT1G69310 41.558 154 74 4 90 240 147 287 2.61e-28 110
MS.gene96858.t1 AT1G69310 41.558 154 74 4 90 240 147 287 2.61e-28 110
MS.gene96858.t1 AT5G49520 32.597 181 100 3 90 251 221 398 6.00e-24 100
MS.gene96858.t1 AT4G39410 43.697 119 63 1 52 166 181 299 3.05e-23 97.1
MS.gene96858.t1 AT1G69310 38.961 154 74 5 90 240 147 283 8.67e-23 95.5
MS.gene96858.t1 AT2G47260 66.102 59 20 0 90 148 174 232 1.01e-22 96.3
MS.gene96858.t1 AT4G18170 68.421 57 18 0 90 146 172 228 4.06e-22 94.4
MS.gene96858.t1 AT1G64000 64.912 57 20 0 90 146 114 170 7.30e-22 90.9
MS.gene96858.t1 AT1G29860 34.591 159 76 3 90 237 136 277 2.45e-21 91.3
MS.gene96858.t1 AT5G46350 66.667 57 19 0 90 146 183 239 2.70e-21 92.0
MS.gene96858.t1 AT2G03340 62.712 59 22 0 88 146 413 471 4.40e-21 93.2
MS.gene96858.t1 AT2G03340 60.345 58 22 1 89 146 249 305 8.03e-15 74.7
MS.gene96858.t1 AT1G13960 62.712 59 22 0 88 146 254 312 4.54e-21 92.0
MS.gene96858.t1 AT1G13960 62.069 58 21 1 89 146 75 131 2.98e-15 75.5
MS.gene96858.t1 AT2G04880 63.077 65 24 0 90 154 283 347 5.11e-21 92.8
MS.gene96858.t1 AT2G04880 67.500 40 13 0 90 129 111 150 1.28e-11 65.1
MS.gene96858.t1 AT1G13960 62.712 59 22 0 88 146 407 465 6.04e-21 92.8
MS.gene96858.t1 AT1G13960 62.069 58 21 1 89 146 228 284 2.35e-15 76.3
MS.gene96858.t1 AT2G04880 63.077 65 24 0 90 154 307 371 7.07e-21 92.4
MS.gene96858.t1 AT2G04880 67.500 40 13 0 90 129 111 150 1.14e-11 65.1
MS.gene96858.t1 AT5G41570 63.158 57 21 0 90 146 98 154 7.63e-21 87.8
MS.gene96858.t1 AT5G13080 61.404 57 22 0 90 146 67 123 2.30e-20 85.5
MS.gene96858.t1 AT5G07100 63.158 57 21 0 90 146 141 197 3.25e-20 87.0
MS.gene96858.t1 AT5G07100 39.450 109 48 2 86 194 20 110 1.05e-14 72.0
MS.gene96858.t1 AT5G07100 63.158 57 21 0 90 146 141 197 3.25e-20 87.0
MS.gene96858.t1 AT5G07100 39.450 109 48 2 86 194 20 110 1.05e-14 72.0
MS.gene96858.t1 AT5G07100 63.158 57 21 0 90 146 141 197 3.25e-20 87.0
MS.gene96858.t1 AT5G07100 39.450 109 48 2 86 194 20 110 1.05e-14 72.0
MS.gene96858.t1 AT5G07100 63.158 57 21 0 90 146 141 197 3.25e-20 87.0
MS.gene96858.t1 AT5G07100 39.450 109 48 2 86 194 20 110 1.05e-14 72.0
MS.gene96858.t1 AT3G62340 64.912 57 20 0 90 146 118 174 4.27e-20 87.8
MS.gene96858.t1 AT2G46130 63.158 57 21 0 90 146 30 86 5.31e-20 83.6
MS.gene96858.t1 AT3G01080 47.312 93 46 2 54 146 311 400 8.44e-20 89.0
MS.gene96858.t1 AT3G01080 59.649 57 22 1 90 146 205 260 1.69e-13 70.5
MS.gene96858.t1 AT3G01080 47.312 93 46 2 54 146 273 362 8.73e-20 89.0
MS.gene96858.t1 AT3G01080 58.621 58 23 1 89 146 166 222 2.06e-13 70.1
MS.gene96858.t1 AT3G01970 59.649 57 23 0 90 146 65 121 8.95e-20 84.0
MS.gene96858.t1 AT5G07100 63.158 57 21 0 90 146 234 290 9.74e-20 87.4
MS.gene96858.t1 AT5G07100 39.450 109 48 2 86 194 113 203 1.14e-14 73.2
MS.gene96858.t1 AT5G56270 63.158 57 21 0 90 146 487 543 1.17e-19 89.4
MS.gene96858.t1 AT5G56270 57.576 66 27 1 85 150 268 332 1.85e-16 79.7
MS.gene96858.t1 AT2G44745 63.793 58 21 0 90 147 145 202 3.49e-19 84.3
MS.gene96858.t1 AT5G26170 57.895 57 24 0 90 146 113 169 3.90e-19 82.8
MS.gene96858.t1 AT4G26640 61.404 57 22 0 90 146 205 261 5.73e-19 86.3
MS.gene96858.t1 AT4G26640 59.322 59 23 1 88 146 33 90 4.10e-14 72.0
MS.gene96858.t1 AT4G26640 61.404 57 22 0 90 146 205 261 5.73e-19 86.3
MS.gene96858.t1 AT4G26640 59.322 59 23 1 88 146 33 90 4.10e-14 72.0
MS.gene96858.t1 AT4G26640 61.404 57 22 0 90 146 205 261 5.73e-19 86.3
MS.gene96858.t1 AT4G26640 59.322 59 23 1 88 146 33 90 4.10e-14 72.0
MS.gene96858.t1 AT4G26640 61.404 57 22 0 90 146 205 261 5.73e-19 86.3
MS.gene96858.t1 AT4G26640 59.322 59 23 1 88 146 33 90 4.10e-14 72.0
MS.gene96858.t1 AT4G26640 61.404 57 22 0 90 146 341 397 6.29e-19 86.7
MS.gene96858.t1 AT4G26640 59.322 59 23 1 88 146 169 226 3.60e-14 72.8
MS.gene96858.t1 AT4G26640 61.404 57 22 0 90 146 381 437 6.75e-19 86.7
MS.gene96858.t1 AT4G26640 59.322 59 23 1 88 146 209 266 3.59e-14 72.8
MS.gene96858.t1 AT4G26640 61.404 57 22 0 90 146 309 365 6.87e-19 86.7
MS.gene96858.t1 AT4G26640 59.322 59 23 1 88 146 137 194 3.90e-14 72.4
MS.gene96858.t1 AT2G38470 61.404 57 22 0 90 146 362 418 3.54e-18 84.7
MS.gene96858.t1 AT2G38470 62.069 58 21 1 89 146 183 239 6.64e-16 77.8
MS.gene96858.t1 AT2G25000 47.191 89 36 3 69 146 72 160 4.55e-18 81.3
MS.gene96858.t1 AT2G25000 47.191 89 36 3 69 146 72 160 4.55e-18 81.3
MS.gene96858.t1 AT5G64810 54.386 57 26 0 90 146 110 166 6.39e-18 80.1
MS.gene96858.t1 AT4G30935 46.835 79 41 1 69 146 309 387 7.18e-18 83.6
MS.gene96858.t1 AT4G30935 36.641 131 73 4 23 146 96 223 5.76e-12 65.9
MS.gene96858.t1 AT4G31550 50.667 75 33 2 76 146 229 303 8.14e-18 82.4
MS.gene96858.t1 AT4G31550 50.667 75 33 2 76 146 228 302 8.22e-18 82.4
MS.gene96858.t1 AT2G25000 47.191 89 36 3 69 146 94 182 8.24e-18 81.3
MS.gene96858.t1 AT1G55600 54.098 61 28 0 90 150 307 367 8.35e-18 83.6
MS.gene96858.t1 AT4G31800 54.237 59 26 1 91 148 112 170 9.11e-18 80.9
MS.gene96858.t1 AT2G21900 54.386 57 26 0 90 146 109 165 9.31e-18 80.1
MS.gene96858.t1 AT2G25000 47.191 89 36 3 69 146 115 203 9.53e-18 81.3
MS.gene96858.t1 AT2G30250 62.500 56 21 0 91 146 329 384 1.02e-17 82.8
MS.gene96858.t1 AT2G30250 56.140 57 24 1 90 146 166 221 1.18e-12 67.8
MS.gene96858.t1 AT4G31800 54.237 59 26 1 91 148 177 235 1.70e-17 81.3
MS.gene96858.t1 AT2G23320 46.835 79 38 2 72 146 219 297 1.80e-17 81.3
MS.gene96858.t1 AT2G37260 57.895 57 24 0 90 146 267 323 3.03e-17 80.9
MS.gene96858.t1 AT2G37260 35.065 154 71 6 91 240 84 212 1.50e-14 73.2
MS.gene96858.t1 AT2G37260 57.895 57 24 0 90 146 269 325 3.17e-17 80.9
MS.gene96858.t1 AT2G37260 35.065 154 71 6 91 240 86 214 1.61e-14 73.2
MS.gene96858.t1 AT2G37260 57.895 57 24 0 90 146 349 405 3.22e-17 81.6
MS.gene96858.t1 AT2G37260 35.065 154 71 6 91 240 166 294 1.47e-14 73.6
MS.gene96858.t1 AT5G28650 49.367 79 36 2 72 146 241 319 3.79e-17 80.5
MS.gene96858.t1 AT4G26440 56.897 58 25 0 90 147 372 429 3.94e-17 81.6
MS.gene96858.t1 AT4G26440 46.154 91 33 2 90 180 178 252 2.68e-16 79.0
MS.gene96858.t1 AT2G30590 48.101 79 37 2 76 150 296 374 9.36e-17 79.7
MS.gene96858.t1 AT5G52830 60.000 60 23 1 88 146 163 222 1.09e-16 79.3
MS.gene96858.t1 AT3G04670 48.101 79 37 2 72 146 241 319 1.23e-16 79.0
MS.gene96858.t1 AT2G24570 49.333 75 34 2 76 146 226 300 3.19e-16 77.8
MS.gene96858.t1 AT1G80840 32.450 151 84 4 6 146 61 203 5.36e-16 77.0
MS.gene96858.t1 AT1G68150 43.182 88 48 2 60 146 206 292 7.02e-16 77.4
MS.gene96858.t1 AT4G01250 48.718 78 37 2 72 148 112 187 8.89e-16 76.3
MS.gene96858.t1 AT2G34830 55.556 63 27 1 85 146 219 281 1.20e-15 77.0
MS.gene96858.t1 AT2G34830 55.556 63 27 1 85 146 210 272 1.20e-15 77.0
MS.gene96858.t1 AT1G29280 57.895 57 23 1 91 146 75 131 1.29e-15 75.1
MS.gene96858.t1 AT4G24240 46.667 75 36 2 76 146 264 338 2.32e-15 75.5
MS.gene96858.t1 AT2G46400 48.148 81 34 2 72 144 81 161 3.80e-15 74.3
MS.gene96858.t1 AT1G30650 40.426 94 55 1 54 146 181 274 4.92e-15 75.1
MS.gene96858.t1 AT5G15130 56.897 58 24 1 90 146 227 284 5.34e-15 75.1
MS.gene96858.t1 AT5G15130 56.897 58 24 1 90 146 185 242 5.69e-15 75.1
MS.gene96858.t1 AT3G58710 59.649 57 22 1 91 146 72 128 9.47e-15 72.8
MS.gene96858.t1 AT3G58710 59.649 57 22 1 91 146 71 127 9.93e-15 72.8
MS.gene96858.t1 AT2G46130 56.140 57 21 1 90 146 30 82 1.12e-14 68.9
MS.gene96858.t1 AT5G45050 46.429 84 42 2 66 146 1126 1209 1.35e-14 74.3
MS.gene96858.t1 AT5G45050 46.429 84 42 2 66 146 1154 1237 1.39e-14 74.3
MS.gene96858.t1 AT5G45050 46.429 84 42 2 66 146 1015 1098 1.80e-14 73.9
MS.gene96858.t1 AT4G23550 55.000 60 26 1 88 146 138 197 1.91e-14 72.4
MS.gene96858.t1 AT2G40740 56.897 58 22 1 90 144 173 230 2.79e-14 72.0
MS.gene96858.t1 AT2G40740 56.897 58 22 1 90 144 182 239 3.27e-14 71.6
MS.gene96858.t1 AT4G04450 53.125 64 29 1 91 153 199 262 3.48e-14 72.4
MS.gene96858.t1 AT1G18860 45.783 83 42 3 65 146 216 296 3.97e-14 72.8
MS.gene96858.t1 AT1G62300 57.895 57 23 1 91 146 313 369 5.48e-14 72.4
MS.gene96858.t1 AT4G04450 57.895 57 23 1 91 146 293 349 5.86e-14 72.0
MS.gene96858.t1 AT4G22070 57.895 57 23 1 91 146 298 354 8.04e-14 71.6
MS.gene96858.t1 AT4G22070 57.895 57 23 1 91 146 298 354 8.04e-14 71.6
MS.gene96858.t1 AT4G22070 57.895 57 23 1 91 146 298 354 8.04e-14 71.6
MS.gene96858.t1 AT4G22070 57.895 57 23 1 91 146 298 354 8.04e-14 71.6
MS.gene96858.t1 AT3G01080 59.649 57 22 1 90 146 205 260 8.69e-14 70.9
MS.gene96858.t1 AT4G01720 55.172 58 25 1 90 146 239 296 5.47e-13 69.3
MS.gene96858.t1 AT4G11070 36.000 125 72 2 23 144 47 166 5.75e-13 68.2
MS.gene96858.t1 AT4G11070 36.000 125 72 2 23 144 79 198 9.01e-13 67.8
MS.gene96858.t1 AT5G24110 53.448 58 24 1 90 144 113 170 1.68e-12 67.0
MS.gene96858.t1 AT1G66560 49.153 59 27 1 90 145 103 161 3.60e-12 65.5
MS.gene96858.t1 AT5G01900 41.121 107 48 5 91 182 111 217 9.83e-12 64.3
MS.gene96858.t1 AT4G23810 50.820 61 27 1 87 144 155 215 1.49e-11 64.3
MS.gene96858.t1 AT2G40750 50.000 58 26 1 90 144 152 209 1.69e-11 64.3
MS.gene96858.t1 AT1G69810 49.153 59 28 2 90 146 203 261 2.07e-11 64.3
MS.gene96858.t1 AT1G69810 49.153 59 28 2 90 146 145 203 2.77e-11 63.5
MS.gene96858.t1 AT1G66550 44.444 63 32 1 90 149 103 165 4.86e-11 62.0
MS.gene96858.t1 AT1G66550 44.444 63 32 1 90 149 108 170 6.01e-11 62.0

Find 78 sgRNAs with CRISPR-Local

Find 190 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATGAACTTCACTTGCTTTA+TGG 0.118410 7.3:-43029853 None:intergenic
CCTCCAGCATCATGGACTTC+TGG 0.222940 7.3:+43030091 MS.gene96858:CDS
TTGTGTACGGTCCAATAAAA+TGG 0.226460 7.3:-43029939 None:intergenic
CTTCACTTGCTTTATGGTCT+TGG 0.238976 7.3:-43029847 None:intergenic
TCAAGAGTTTACCTAGGATT+TGG 0.255247 7.3:-43027784 None:intergenic
AGCCCAATCTAGTAATTCTT+TGG 0.285857 7.3:+43029904 MS.gene96858:CDS
AGAAAATAATGTCTTCTAAT+TGG 0.303170 7.3:+43027230 MS.gene96858:CDS
AATTACTAGATTGGGCTTCA+TGG 0.316924 7.3:-43029898 None:intergenic
TCACTATCTACATTGTTTGT+AGG 0.321367 7.3:-43030031 None:intergenic
GATTGTCCCACTATGAAATA+AGG 0.327297 7.3:-43029761 None:intergenic
TTCACTTGCTTTATGGTCTT+GGG 0.328292 7.3:-43029846 None:intergenic
CAAGAGTTTACCTAGGATTT+GGG 0.328816 7.3:-43027783 None:intergenic
GGATATAGGTGGAGGAAGTA+TGG 0.340368 7.3:+43027739 MS.gene96858:CDS
ATATGGTGCCATTCATGTTT+AGG 0.340857 7.3:+43030005 MS.gene96858:CDS
TTCCAAAGAATTACTAGATT+GGG 0.346671 7.3:-43029906 None:intergenic
AGAAGGGTTGCTTGAAGATA+TGG 0.390745 7.3:+43029988 MS.gene96858:CDS
TGCTTATCCTTATTTCATAG+TGG 0.391267 7.3:+43029754 MS.gene96858:CDS
AAATGAACCTATTAAAAGCT+TGG 0.401637 7.3:-43027366 None:intergenic
TGGACTTCTTCATTGGTGGA+TGG 0.401908 7.3:-43029799 None:intergenic
GTTCCAAAGAATTACTAGAT+TGG 0.406024 7.3:-43029907 None:intergenic
GCTTCTTAGCACCACACCTT+GGG 0.406138 7.3:-43029664 None:intergenic
CTCCATCATTGTCTTTGACA+TGG 0.406707 7.3:-43027209 None:intergenic
CACTATCTACATTGTTTGTA+GGG 0.407160 7.3:-43030030 None:intergenic
TAAGTGATTATGAGAGTGTC+AGG 0.409746 7.3:-43029710 None:intergenic
GCCTTGGACTTCTTCATTGG+TGG 0.411270 7.3:-43029803 None:intergenic
TGAAGAATCATGACTTAAGT+TGG 0.411681 7.3:-43027338 None:intergenic
ACTTTGAAAATCAAATGCTT+TGG 0.412320 7.3:+43027697 MS.gene96858:CDS
GTAGCCTTGGACTTCTTCAT+TGG 0.412428 7.3:-43029806 None:intergenic
GATACGGTCCAAGAAAATTT+CGG 0.416624 7.3:+43029962 MS.gene96858:CDS
GGACTTCTTCATTGGTGGAT+GGG 0.423548 7.3:-43029798 None:intergenic
GGCAATGGGTTGGGTGATGA+TGG 0.433026 7.3:+43027718 MS.gene96858:CDS
GAGAGTGTCAGGGTCTTCAT+TGG 0.440141 7.3:-43029699 None:intergenic
AAATCAAATGCTTTGGCAAT+GGG 0.442693 7.3:+43027704 MS.gene96858:CDS
TCCACCTCTTGTTATGCAGT+TGG 0.445677 7.3:+43030124 MS.gene96858:CDS
TCCTTGTGAAGAGGTAGCCT+TGG 0.445914 7.3:-43029819 None:intergenic
AGGAGAAATGTGTGAGGAGA+AGG 0.447017 7.3:-43030071 None:intergenic
GGTTGGGTGATGATGGATAT+AGG 0.450448 7.3:+43027725 MS.gene96858:CDS
TCAGAGTTTCTATATTAGAA+AGG 0.451303 7.3:+43027647 MS.gene96858:intron
CAAGAAAATTTCGGCTCAGA+AGG 0.452520 7.3:+43029971 MS.gene96858:CDS
AAAATCAAATGCTTTGGCAA+TGG 0.453326 7.3:+43027703 MS.gene96858:CDS
AAATGCTTTGGCAATGGGTT+GGG 0.461090 7.3:+43027709 MS.gene96858:CDS
TGTGTACGGTCCAATAAAAT+GGG 0.485883 7.3:-43029938 None:intergenic
CTTGCTTTATGGTCTTGGGT+TGG 0.490234 7.3:-43029842 None:intergenic
GCTTATCCTTATTTCATAGT+GGG 0.490566 7.3:+43029755 MS.gene96858:CDS
CTTGGACCGTATCTTGTGTA+CGG 0.501432 7.3:-43029952 None:intergenic
CTTAGCACCACACCTTGGGT+TGG 0.505309 7.3:-43029660 None:intergenic
TCAAGAATAGCCCAAATCCT+AGG 0.505398 7.3:+43027773 MS.gene96858:CDS
TGCATAACAAGAGGTGGAAG+TGG 0.506302 7.3:-43030119 None:intergenic
TCATGAAGGTCAGAATATAC+AGG 0.507774 7.3:+43029871 MS.gene96858:CDS
GTAGGGTTCCTAAACATGAA+TGG 0.515606 7.3:-43030013 None:intergenic
AAACCAGAAGTCCATGATGC+TGG 0.516277 7.3:-43030094 None:intergenic
GAACAAACAGGAGTTACTAT+AGG 0.522580 7.3:+43029633 MS.gene96858:intron
ACTCTCATAATCACTTATGA+AGG 0.527480 7.3:+43029716 MS.gene96858:CDS
CAAATGCTTTGGCAATGGGT+TGG 0.534026 7.3:+43027708 MS.gene96858:CDS
ATTGGACCGTACACAAGATA+CGG 0.536511 7.3:+43029946 MS.gene96858:CDS
TGCTTCTTAGCACCACACCT+TGG 0.538042 7.3:-43029665 None:intergenic
ATATTAATAATTTAAACACT+AGG 0.538963 7.3:-43030154 None:intergenic
ACATTTCTCCTCCAGCATCA+TGG 0.539032 7.3:+43030083 MS.gene96858:CDS
ATCCATGTCAAAGACAATGA+TGG 0.541467 7.3:+43027207 MS.gene96858:CDS
TTGGGTTGGTCCTTGTGAAG+AGG 0.546121 7.3:-43029828 None:intergenic
AAGGTGTGGTGCTAAGAAGC+AGG 0.570713 7.3:+43029667 MS.gene96858:CDS
AAGGATAAGCAAAGTGCAAG+TGG 0.571322 7.3:-43029742 None:intergenic
GCCAACTGCATAACAAGAGG+TGG 0.583245 7.3:-43030125 None:intergenic
AAGAAAATTTCGGCTCAGAA+GGG 0.589966 7.3:+43029972 MS.gene96858:CDS
AAAGCAAGTGAAGTTCATGA+AGG 0.612429 7.3:+43029857 MS.gene96858:CDS
TCATGTGGCAACATAAGAAG+AGG 0.619719 7.3:-43027298 None:intergenic
TCCAAGGCTACCTCTTCACA+AGG 0.631287 7.3:+43029818 MS.gene96858:CDS
AATGTCTTCTAATTGGTCAG+AGG 0.638714 7.3:+43027237 MS.gene96858:CDS
AGGTGCACCAACCCAAGGTG+TGG 0.643144 7.3:+43029653 MS.gene96858:CDS
ACTATAGGTGCACCAACCCA+AGG 0.643448 7.3:+43029648 MS.gene96858:CDS
TAAGCCAACTGCATAACAAG+AGG 0.657613 7.3:-43030128 None:intergenic
GTGATGATGGATATAGGTGG+AGG 0.658043 7.3:+43027731 MS.gene96858:CDS
CCAGAAGTCCATGATGCTGG+AGG 0.662453 7.3:-43030091 None:intergenic
TGGGTGATGATGGATATAGG+TGG 0.667370 7.3:+43027728 MS.gene96858:CDS
ACTTCAGATACTCTCTCATG+TGG 0.678108 7.3:-43027313 None:intergenic
TCCACCAATGAAGAAGTCCA+AGG 0.685535 7.3:+43029802 MS.gene96858:CDS
AAGTGATTATGAGAGTGTCA+GGG 0.690845 7.3:-43029709 None:intergenic
TGCTGGAGGAGAAATGTGTG+AGG 0.705817 7.3:-43030077 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATTTTGATATGATAAAAT+AGG - chr7.3:43028225-43028244 None:intergenic 10.0%
!! AAGAAAATATATAAAAGTGA+AGG - chr7.3:43027837-43027856 None:intergenic 15.0%
!! GATAATGAAATACTATTTAA+AGG - chr7.3:43028622-43028641 None:intergenic 15.0%
!! TGAAAAAATTTACTATTTGT+GGG - chr7.3:43028487-43028506 None:intergenic 15.0%
!! TTCATTTCAAATATTTATTC+AGG + chr7.3:43027382-43027401 MS.gene96858:intron 15.0%
!! TTGAAAAAATTTACTATTTG+TGG - chr7.3:43028488-43028507 None:intergenic 15.0%
!!! AATACTTCAACTTTTTTTTT+TGG + chr7.3:43027488-43027507 MS.gene96858:intron 15.0%
!!! ATAGTAAATTTTTTCAATGT+TGG + chr7.3:43028491-43028510 MS.gene96858:intron 15.0%
!!! ATTTTGCACTTTTATTTTTA+AGG - chr7.3:43029397-43029416 None:intergenic 15.0%
!!! TATAAAATTTGAAACTTTCA+AGG - chr7.3:43028791-43028810 None:intergenic 15.0%
!!! TTTTGCACTTTTATTTTTAA+GGG - chr7.3:43029396-43029415 None:intergenic 15.0%
!! AACATAACATAAGGTTTATA+AGG - chr7.3:43028357-43028376 None:intergenic 20.0%
!! AATCTTCTCAAATTAGTTAA+GGG - chr7.3:43029563-43029582 None:intergenic 20.0%
!! AATGAGTTATACATACAAAA+GGG + chr7.3:43029367-43029386 MS.gene96858:intron 20.0%
!! AGAAAATAATGTCTTCTAAT+TGG + chr7.3:43027230-43027249 MS.gene96858:CDS 20.0%
!! CAACAAATTCAAATTCATTT+AGG - chr7.3:43028134-43028153 None:intergenic 20.0%
!! TAATCTTCTCAAATTAGTTA+AGG - chr7.3:43029564-43029583 None:intergenic 20.0%
!! TTGATGAAAATTGTTGAAAT+TGG - chr7.3:43027459-43027478 None:intergenic 20.0%
!!! AGAGAGTTTTAAATATTCTA+AGG + chr7.3:43028568-43028587 MS.gene96858:intron 20.0%
!!! ATCACTACTCTTATTTTTAA+GGG - chr7.3:43029159-43029178 None:intergenic 20.0%
!!! CATTTTAAGATAACAAAATG+AGG - chr7.3:43028431-43028450 None:intergenic 20.0%
!!! GATAAAAAGTTGAATGTTTT+AGG - chr7.3:43028764-43028783 None:intergenic 20.0%
!!! TAAATAAGCTTTGTTTGAAA+AGG - chr7.3:43027961-43027980 None:intergenic 20.0%
!!! TATCACTACTCTTATTTTTA+AGG - chr7.3:43029160-43029179 None:intergenic 20.0%
!!! TCTTTTACATGTAATGTAAT+GGG + chr7.3:43027810-43027829 MS.gene96858:intron 20.0%
!!! TTCTTTTACATGTAATGTAA+TGG + chr7.3:43027809-43027828 MS.gene96858:intron 20.0%
!!! TTTATAGTTTGCATATCAAT+TGG + chr7.3:43028681-43028700 MS.gene96858:intron 20.0%
!!! TTTTCATTGGTCAAAAATAA+TGG + chr7.3:43029230-43029249 MS.gene96858:intron 20.0%
!!! TTTTTAAACCAATCATACTA+TGG - chr7.3:43029465-43029484 None:intergenic 20.0%
!!! TTTTTTTTCTCTCTTTTCAT+TGG + chr7.3:43029217-43029236 MS.gene96858:intron 20.0%
! AAATGAACCTATTAAAAGCT+TGG - chr7.3:43027369-43027388 None:intergenic 25.0%
! AATTACACACATCAAATAAG+TGG - chr7.3:43027609-43027628 None:intergenic 25.0%
! ACAATTCTAATGTGTACTTA+AGG + chr7.3:43029104-43029123 MS.gene96858:intron 25.0%
! AGTATTATAGTCATTCAGTT+AGG - chr7.3:43028898-43028917 None:intergenic 25.0%
! ATATGCAAACTATAAAAGTG+TGG - chr7.3:43028677-43028696 None:intergenic 25.0%
! ATCAAATAAGTGGACAAAAT+TGG - chr7.3:43027599-43027618 None:intergenic 25.0%
! ATGAGCAATTGTAATTATCT+TGG - chr7.3:43028325-43028344 None:intergenic 25.0%
! ATTGTTGAAATTGGTTACTA+TGG - chr7.3:43027450-43027469 None:intergenic 25.0%
! CAAACAAGTAACATAACATA+AGG - chr7.3:43028366-43028385 None:intergenic 25.0%
! CAATGAGTTATACATACAAA+AGG + chr7.3:43029366-43029385 MS.gene96858:intron 25.0%
! GATGAAAAACAAACATTTAG+AGG + chr7.3:43028186-43028205 MS.gene96858:intron 25.0%
! GTATTTAGGAAAGATTTGAA+AGG - chr7.3:43028517-43028536 None:intergenic 25.0%
! TAAGGCATATATATAGTACT+TGG + chr7.3:43027912-43027931 MS.gene96858:intron 25.0%
! TACTATATATATGCCTTAAC+AGG - chr7.3:43027910-43027929 None:intergenic 25.0%
! TATCTTAAAATGTAAGTCGT+TGG + chr7.3:43028439-43028458 MS.gene96858:intron 25.0%
! TCAAAATATAAGTCACTAGA+TGG + chr7.3:43028236-43028255 MS.gene96858:intron 25.0%
! TCAGAGTTTCTATATTAGAA+AGG + chr7.3:43027647-43027666 MS.gene96858:intron 25.0%
! TTACTCATTAATCCTATAGT+CGG - chr7.3:43028651-43028670 None:intergenic 25.0%
! TTCCAAAGAATTACTAGATT+GGG - chr7.3:43029909-43029928 None:intergenic 25.0%
! TTTATCAACCATAGTATGAT+TGG + chr7.3:43029454-43029473 MS.gene96858:intron 25.0%
!! AATTTGAAACTTTCAAGGTT+TGG - chr7.3:43028786-43028805 None:intergenic 25.0%
!! ACTTGCATGGTAATTTTATT+AGG + chr7.3:43027514-43027533 MS.gene96858:intron 25.0%
!! ACTTTGAAAATCAAATGCTT+TGG + chr7.3:43027697-43027716 MS.gene96858:CDS 25.0%
!! CACATTAGAATTGTCAATTT+TGG - chr7.3:43029098-43029117 None:intergenic 25.0%
!! CATCAATAATGCATCATTTT+TGG - chr7.3:43028170-43028189 None:intergenic 25.0%
!! CTAGACACTATCAATTTTAT+AGG - chr7.3:43028043-43028062 None:intergenic 25.0%
!! CTTTTACATGTAATGTAATG+GGG + chr7.3:43027811-43027830 MS.gene96858:intron 25.0%
!! TATGCAAACTATAAAAGTGT+GGG - chr7.3:43028676-43028695 None:intergenic 25.0%
!! TCTAAAAAATGCTGCTTAAA+AGG + chr7.3:43028838-43028857 MS.gene96858:intron 25.0%
!! TTCAACAATTTTCATCAACA+AGG + chr7.3:43027461-43027480 MS.gene96858:intron 25.0%
!!! ATTACAAATTTTTTATGCCG+TGG + chr7.3:43029611-43029630 MS.gene96858:intron 25.0%
!!! GAATTTGTTGTAGTAGTAAA+AGG + chr7.3:43028144-43028163 MS.gene96858:intron 25.0%
!!! TTTTTTTTGGTTAACTTGCA+TGG + chr7.3:43027501-43027520 MS.gene96858:intron 25.0%
AAAATCAAATGCTTTGGCAA+TGG + chr7.3:43027703-43027722 MS.gene96858:CDS 30.0%
AAATCAAATGCTTTGGCAAT+GGG + chr7.3:43027704-43027723 MS.gene96858:CDS 30.0%
AAGAGCAGAATTCACTTAAA+AGG + chr7.3:43029038-43029057 MS.gene96858:intron 30.0%
ACTCTCATAATCACTTATGA+AGG + chr7.3:43029716-43029735 MS.gene96858:CDS 30.0%
ACTTAAATTGCATGACTAGT+AGG + chr7.3:43028269-43028288 MS.gene96858:intron 30.0%
AGCAATTGTAATTATCTTGG+AGG - chr7.3:43028322-43028341 None:intergenic 30.0%
ATATGCAACTGTACTATAGT+CGG - chr7.3:43028729-43028748 None:intergenic 30.0%
ATTATCTTCAAACCGACTAT+AGG + chr7.3:43028636-43028655 MS.gene96858:intron 30.0%
CACTATCTACATTGTTTGTA+GGG - chr7.3:43030033-43030052 None:intergenic 30.0%
GCAATTGTAATTATCTTGGA+GGG - chr7.3:43028321-43028340 None:intergenic 30.0%
GTTCCAAAGAATTACTAGAT+TGG - chr7.3:43029910-43029929 None:intergenic 30.0%
TATATATGCCTTAACAGGAT+TGG - chr7.3:43027905-43027924 None:intergenic 30.0%
TCACTATCTACATTGTTTGT+AGG - chr7.3:43030034-43030053 None:intergenic 30.0%
TGAAGAATCATGACTTAAGT+TGG - chr7.3:43027341-43027360 None:intergenic 30.0%
! ACTCATTTCACCCATTTTAT+TGG + chr7.3:43029928-43029947 MS.gene96858:CDS 30.0%
! AGCATTTTCAATATCTGAGA+TGG - chr7.3:43027413-43027432 None:intergenic 30.0%
! ATGCAAACTATAAAAGTGTG+GGG - chr7.3:43028675-43028694 None:intergenic 30.0%
! CAAAAGACCAAGCTTTTAAT+AGG + chr7.3:43027359-43027378 MS.gene96858:CDS 30.0%
! GCTTATCCTTATTTCATAGT+GGG + chr7.3:43029755-43029774 MS.gene96858:CDS 30.0%
! TGCTTATCCTTATTTCATAG+TGG + chr7.3:43029754-43029773 MS.gene96858:CDS 30.0%
! TGTCATATGCTTGTTAGATT+TGG + chr7.3:43027562-43027581 MS.gene96858:intron 30.0%
!! TTTTCAATATCTGAGATGGT+AGG - chr7.3:43027409-43027428 None:intergenic 30.0%
AAAGCAAGTGAAGTTCATGA+AGG + chr7.3:43029857-43029876 MS.gene96858:CDS 35.0%
AAGAAAATTTCGGCTCAGAA+GGG + chr7.3:43029972-43029991 MS.gene96858:CDS 35.0%
AATGTCTTCTAATTGGTCAG+AGG + chr7.3:43027237-43027256 MS.gene96858:CDS 35.0%
AATTACTAGATTGGGCTTCA+TGG - chr7.3:43029901-43029920 None:intergenic 35.0%
ACAAAACCTACTACTAGCAT+TGG - chr7.3:43029132-43029151 None:intergenic 35.0%
AGAAAGTCAAGAGTTTACCT+AGG - chr7.3:43027793-43027812 None:intergenic 35.0%
AGCCCAATCTAGTAATTCTT+TGG + chr7.3:43029904-43029923 MS.gene96858:CDS 35.0%
ATCCATGTCAAAGACAATGA+TGG + chr7.3:43027207-43027226 MS.gene96858:CDS 35.0%
CAAAACCTACTACTAGCATT+GGG - chr7.3:43029131-43029150 None:intergenic 35.0%
CAAGAGTTTACCTAGGATTT+GGG - chr7.3:43027786-43027805 None:intergenic 35.0%
CAATACACGTGCAAGTATTT+AGG - chr7.3:43028531-43028550 None:intergenic 35.0%
CATGAACTTCACTTGCTTTA+TGG - chr7.3:43029856-43029875 None:intergenic 35.0%
CTAACAAGCATATGACAAGT+TGG - chr7.3:43027559-43027578 None:intergenic 35.0%
GAACAAACAGGAGTTACTAT+AGG + chr7.3:43029633-43029652 MS.gene96858:intron 35.0%
GAGAGAAAGTTGTCATAAAG+TGG + chr7.3:43029299-43029318 MS.gene96858:intron 35.0%
GATACGGTCCAAGAAAATTT+CGG + chr7.3:43029962-43029981 MS.gene96858:CDS 35.0%
GATTGTCCCACTATGAAATA+AGG - chr7.3:43029764-43029783 None:intergenic 35.0%
TCAAGAGTTTACCTAGGATT+TGG - chr7.3:43027787-43027806 None:intergenic 35.0%
TCATGAAGGTCAGAATATAC+AGG + chr7.3:43029871-43029890 MS.gene96858:CDS 35.0%
TCCTTAAACCAATCCTGTTA+AGG + chr7.3:43027894-43027913 MS.gene96858:intron 35.0%
TGTGTACGGTCCAATAAAAT+GGG - chr7.3:43029941-43029960 None:intergenic 35.0%
TTAGGCTTAGTTGCATGAAT+TGG + chr7.3:43027532-43027551 MS.gene96858:intron 35.0%
TTCACTTGCTTTATGGTCTT+GGG - chr7.3:43029849-43029868 None:intergenic 35.0%
TTGTGTACGGTCCAATAAAA+TGG - chr7.3:43029942-43029961 None:intergenic 35.0%
! ATTGCATGACTAGTAGGTTT+TGG + chr7.3:43028275-43028294 MS.gene96858:intron 35.0%
! CAGTTAGGAATGAGCATTTT+TGG - chr7.3:43028883-43028902 None:intergenic 35.0%
!! AAGTGATTATGAGAGTGTCA+GGG - chr7.3:43029712-43029731 None:intergenic 35.0%
!! ACTGTACTATAGTCGGTTTT+AGG - chr7.3:43028722-43028741 None:intergenic 35.0%
!! AGGATTAGTTGAGTTGATCA+TGG - chr7.3:43028602-43028621 None:intergenic 35.0%
!! ATATGGTGCCATTCATGTTT+AGG + chr7.3:43030005-43030024 MS.gene96858:CDS 35.0%
!! GTATTTTGGGAAGTTTGGTT+GGG + chr7.3:43028993-43029012 MS.gene96858:intron 35.0%
!! TAAGTGATTATGAGAGTGTC+AGG - chr7.3:43029713-43029732 None:intergenic 35.0%
!!! AAGCAGCATTTTTTAGAAGC+TGG - chr7.3:43028835-43028854 None:intergenic 35.0%
!!! AGGAATGAGCATTTTTGGTT+GGG - chr7.3:43028878-43028897 None:intergenic 35.0%
!!! TAGGAATGAGCATTTTTGGT+TGG - chr7.3:43028879-43028898 None:intergenic 35.0%
AAGGATAAGCAAAGTGCAAG+TGG - chr7.3:43029745-43029764 None:intergenic 40.0%
AATCTTGCGTGAGTTAACTC+AGG + chr7.3:43028946-43028965 MS.gene96858:intron 40.0%
ACTTCAGATACTCTCTCATG+TGG - chr7.3:43027316-43027335 None:intergenic 40.0%
AGAAGGGTTGCTTGAAGATA+TGG + chr7.3:43029988-43030007 MS.gene96858:CDS 40.0%
AGTAACTCCTGTTTGTTCCA+CGG - chr7.3:43029631-43029650 None:intergenic 40.0%
ATTGGACCGTACACAAGATA+CGG + chr7.3:43029946-43029965 MS.gene96858:CDS 40.0%
CAAGAAAATTTCGGCTCAGA+AGG + chr7.3:43029971-43029990 MS.gene96858:CDS 40.0%
CTCCATCATTGTCTTTGACA+TGG - chr7.3:43027212-43027231 None:intergenic 40.0%
CTTCACTTGCTTTATGGTCT+TGG - chr7.3:43029850-43029869 None:intergenic 40.0%
GTAAGTCGTTGGATTGAGAT+CGG + chr7.3:43028450-43028469 MS.gene96858:intron 40.0%
GTAGGGTTCCTAAACATGAA+TGG - chr7.3:43030016-43030035 None:intergenic 40.0%
TAAGCCAACTGCATAACAAG+AGG - chr7.3:43030131-43030150 None:intergenic 40.0%
TCAAGAATAGCCCAAATCCT+AGG + chr7.3:43027773-43027792 MS.gene96858:CDS 40.0%
TCATGTGGCAACATAAGAAG+AGG - chr7.3:43027301-43027320 None:intergenic 40.0%
! AAATGCTTTGGCAATGGGTT+GGG + chr7.3:43027709-43027728 MS.gene96858:CDS 40.0%
! CTTCTGAGCCGAAATTTTCT+TGG - chr7.3:43029973-43029992 None:intergenic 40.0%
! TTTTATGCCGTGGAACAAAC+AGG + chr7.3:43029621-43029640 MS.gene96858:intron 40.0%
!! GCCTTAACAGGATTGGTTTA+AGG - chr7.3:43027898-43027917 None:intergenic 40.0%
!! GGTATTTTGGGAAGTTTGGT+TGG + chr7.3:43028992-43029011 MS.gene96858:intron 40.0%
!!! AGTCGGTTTTAGGTAATCGA+AGG - chr7.3:43028712-43028731 None:intergenic 40.0%
AAACCAGAAGTCCATGATGC+TGG - chr7.3:43030097-43030116 None:intergenic 45.0%
AAGGACCCAATGCTAGTAGT+AGG + chr7.3:43029123-43029142 MS.gene96858:intron 45.0%
ACATTTCTCCTCCAGCATCA+TGG + chr7.3:43030083-43030102 MS.gene96858:CDS 45.0%
ACCTTGCCTAGTGAATCCTT+TGG + chr7.3:43029066-43029085 MS.gene96858:intron 45.0%
AGGAGAAATGTGTGAGGAGA+AGG - chr7.3:43030074-43030093 None:intergenic 45.0%
CAAATGCTTTGGCAATGGGT+TGG + chr7.3:43027708-43027727 MS.gene96858:CDS 45.0%
CCTTGCCTAGTGAATCCTTT+GGG + chr7.3:43029067-43029086 MS.gene96858:intron 45.0%
CTTGGACCGTATCTTGTGTA+CGG - chr7.3:43029955-43029974 None:intergenic 45.0%
GGATATAGGTGGAGGAAGTA+TGG + chr7.3:43027739-43027758 MS.gene96858:CDS 45.0%
TCCACCAATGAAGAAGTCCA+AGG + chr7.3:43029802-43029821 MS.gene96858:CDS 45.0%
TGCATAACAAGAGGTGGAAG+TGG - chr7.3:43030122-43030141 None:intergenic 45.0%
TGGACTTCTTCATTGGTGGA+TGG - chr7.3:43029802-43029821 None:intergenic 45.0%
! CCTAGTGAATCCTTTGGGTT+GGG + chr7.3:43029072-43029091 MS.gene96858:intron 45.0%
! CTTGCTTTATGGTCTTGGGT+TGG - chr7.3:43029845-43029864 None:intergenic 45.0%
! GGACTTCTTCATTGGTGGAT+GGG - chr7.3:43029801-43029820 None:intergenic 45.0%
! GTAGCCTTGGACTTCTTCAT+TGG - chr7.3:43029809-43029828 None:intergenic 45.0%
! TCCACCTCTTGTTATGCAGT+TGG + chr7.3:43030124-43030143 MS.gene96858:CDS 45.0%
!! GGTTGGGTGATGATGGATAT+AGG + chr7.3:43027725-43027744 MS.gene96858:CDS 45.0%
!! GTGATGATGGATATAGGTGG+AGG + chr7.3:43027731-43027750 MS.gene96858:CDS 45.0%
!! TCAATTTTGGCCCAACCCAA+AGG - chr7.3:43029085-43029104 None:intergenic 45.0%
!! TGGGTGATGATGGATATAGG+TGG + chr7.3:43027728-43027747 MS.gene96858:CDS 45.0%
!!! AAGTGACGCAGGGGTATTTT+GGG + chr7.3:43028980-43028999 MS.gene96858:intron 45.0%
!!! CAGGGGTATTTTGGGAAGTT+TGG + chr7.3:43028988-43029007 MS.gene96858:intron 45.0%
!!! GGGAGCGAGCATTTTTAGTT+GGG + chr7.3:43029013-43029032 MS.gene96858:intron 45.0%
!!! TAAGTGACGCAGGGGTATTT+TGG + chr7.3:43028979-43028998 MS.gene96858:intron 45.0%
!!! TGGGAGCGAGCATTTTTAGT+TGG + chr7.3:43029012-43029031 MS.gene96858:intron 45.0%
ACTATAGGTGCACCAACCCA+AGG + chr7.3:43029648-43029667 MS.gene96858:CDS 50.0%
AGGATTCACTAGGCAAGGTG+AGG - chr7.3:43029065-43029084 None:intergenic 50.0%
CCCAAAGGATTCACTAGGCA+AGG - chr7.3:43029070-43029089 None:intergenic 50.0%
CCCAACCCAAAGGATTCACT+AGG - chr7.3:43029075-43029094 None:intergenic 50.0%
GCCAACTGCATAACAAGAGG+TGG - chr7.3:43030128-43030147 None:intergenic 50.0%
GCCTAGTGAATCCTTTGGGT+TGG + chr7.3:43029071-43029090 MS.gene96858:intron 50.0%
GCCTTGGACTTCTTCATTGG+TGG - chr7.3:43029806-43029825 None:intergenic 50.0%
GCTTCTTAGCACCACACCTT+GGG - chr7.3:43029667-43029686 None:intergenic 50.0%
GGATTCACTAGGCAAGGTGA+GGG - chr7.3:43029064-43029083 None:intergenic 50.0%
TCCAAGGCTACCTCTTCACA+AGG + chr7.3:43029818-43029837 MS.gene96858:CDS 50.0%
TCCTTGTGAAGAGGTAGCCT+TGG - chr7.3:43029822-43029841 None:intergenic 50.0%
TGCGTGACTTAAGTGACGCA+GGG + chr7.3:43028970-43028989 MS.gene96858:intron 50.0%
TGCTGGAGGAGAAATGTGTG+AGG - chr7.3:43030080-43030099 None:intergenic 50.0%
TGCTTCTTAGCACCACACCT+TGG - chr7.3:43029668-43029687 None:intergenic 50.0%
TTGCGTGACTTAAGTGACGC+AGG + chr7.3:43028969-43028988 MS.gene96858:intron 50.0%
! AAGGTGTGGTGCTAAGAAGC+AGG + chr7.3:43029667-43029686 MS.gene96858:CDS 50.0%
!! GAGAGTGTCAGGGTCTTCAT+TGG - chr7.3:43029702-43029721 None:intergenic 50.0%
!! TTGGGTTGGTCCTTGTGAAG+AGG - chr7.3:43029831-43029850 None:intergenic 50.0%
CCAGAAGTCCATGATGCTGG+AGG - chr7.3:43030094-43030113 None:intergenic 55.0%
CCTCCAGCATCATGGACTTC+TGG + chr7.3:43030091-43030110 MS.gene96858:CDS 55.0%
CTTAGCACCACACCTTGGGT+TGG - chr7.3:43029663-43029682 None:intergenic 55.0%
GCGTGACTTAAGTGACGCAG+GGG + chr7.3:43028971-43028990 MS.gene96858:intron 55.0%
!! GGCAATGGGTTGGGTGATGA+TGG + chr7.3:43027718-43027737 MS.gene96858:CDS 55.0%
AGGTGCACCAACCCAAGGTG+TGG + chr7.3:43029653-43029672 MS.gene96858:CDS 60.0%


Chromosome Type Strat End Strand Name
chr7.3 gene 43027196 43030165 43027196 ID=MS.gene96858
chr7.3 mRNA 43027196 43030165 43027196 ID=MS.gene96858.t1;Parent=MS.gene96858
chr7.3 exon 43027196 43027380 43027196 ID=MS.gene96858.t1.exon1;Parent=MS.gene96858.t1
chr7.3 CDS 43027196 43027380 43027196 ID=cds.MS.gene96858.t1;Parent=MS.gene96858.t1
chr7.3 exon 43027651 43027794 43027651 ID=MS.gene96858.t1.exon2;Parent=MS.gene96858.t1
chr7.3 CDS 43027651 43027794 43027651 ID=cds.MS.gene96858.t1;Parent=MS.gene96858.t1
chr7.3 exon 43029643 43030165 43029643 ID=MS.gene96858.t1.exon3;Parent=MS.gene96858.t1
chr7.3 CDS 43029643 43030165 43029643 ID=cds.MS.gene96858.t1;Parent=MS.gene96858.t1
Gene Sequence

>MS.gene96858

ATGATTGACTCATCCATGTCAAAGACAATGATGGAGAAAATAATGTCTTCTAATTGGTCAGAGGATGATGAACTTTTAAGAGAGCTTTTAGTTGATGAGTCTCCTCTTCTTATGTTGCCACATGAGAGAGTATCTGAAGTAACCAACTTAAGTCATGATTCTTCAAAAGACCAAGCTTTTAATAGGTTCATTTCAAATATTTATTCAGGTCCTACCATCTCAGATATTGAAAATGCTTTGTTAGTTACTAACCATAGTAACCAATTTCAACAATTTTCATCAACAAGGTAAGAATACTTCAACTTTTTTTTTTGGTTAACTTGCATGGTAATTTTATTAGGCTTAGTTGCATGAATTGGACCAACTTGTCATATGCTTGTTAGATTTGGAGAATTGTTTACCAATTTTGTCCACTTATTTGATGTGTGTAATTGTGTTTCATATTTTCATTTCAGAGTTTCTATATTAGAAAGGAGTTTGAGTAAGATTGAGAATAAGTATACTTTGAAAATCAAATGCTTTGGCAATGGGTTGGGTGATGATGGATATAGGTGGAGGAAGTATGGTCAGAAATCAATCAAGAATAGCCCAAATCCTAGGTAAACTCTTGACTTTCTTTTACATGTAATGTAATGGGGCCTTCACTTTTATATATTTTCTTTGTTTTGCTCATTTACTTGTGAATTTTTTTAGATATTTCCTTAAACCAATCCTGTTAAGGCATATATATAGTACTTGGCAATAGTTTTAACTTTTAAACATCCTTTTCAAACAAAGCTTATTTAGTTCAATAAAATAAATACAACTTCAATAGATTATTGAGATACATACAACTATTTACTCACCTATAAAATTGATAGTGTCTAGAAAATTTAGAGTAAAACTTAATCAAGTTGTAGACATGTCACAAGTTATAAATTATATTTATAAAATCTCCTAAATGAATTTGAATTTGTTGTAGTAGTAAAAGGCCAAAAATGATGCATTATTGATGAAAAACAAACATTTAGAGGTTGAATTTTGAGTCCTATTTTATCATATCAAAATATAAGTCACTAGATGGAGATCAAACAACTTAAATTGCATGACTAGTAGGTTTTGGTTACTACAGATAATTCATGACCCTCCAAGATAATTACAATTGCTCATAATATAAATCCTTATAAACCTTATGTTATGTTACTTGTTTGATCTCAATCAAACGACTAACATTTTTTATGTTAAATTTTCAACCTCATTTTGTTATCTTAAAATGTAAGTCGTTGGATTGAGATCGGACGACTCAAATCCCACAAATAGTAAATTTTTTCAATGTTGGCCTTTCAAATCTTTCCTAAATACTTGCACGTGTATTGTAAGTAAGATTGTCTAAAGAGAGTTTTAAATATTCTAAGGCTTCTTTACCATGATCAACTCAACTAATCCTTTAAATAGTATTTCATTATCTTCAAACCGACTATAGGATTAATGAGTAAGCCCCACACTTTTATAGTTTGCATATCAATTGGAAAAGCCTTCGATTACCTAAAACCGACTATAGTACAGTTGCATATCAAATTCAATTACCTAAAACATTCAACTTTTTATCCAAACCTTGAAAGTTTCAAATTTTATAGTAGCAAAAGCAAGCATTAAACCAGCTTCTAAAAAATGCTGCTTAAAAGGAATTATGCTCTTTACCCAACCAAAAATGCTCATTCCTAACTGAATGACTATAATACTCTGCGTGAGTTAACTCACACTAGTTATAAATCTTGCGTGAGTTAACTCAGGTTGCGTGACTTAAGTGACGCAGGGGTATTTTGGGAAGTTTGGTTGGGAGCGAGCATTTTTAGTTGGGTAAAGAGCAGAATTCACTTAAAAGGCCCTCACCTTGCCTAGTGAATCCTTTGGGTTGGGCCAAAATTGACAATTCTAATGTGTACTTAAGGACCCAATGCTAGTAGTAGGTTTTGTAATACCCTTAAAAATAAGAGTAGTGATATTTGAACAACTCATTTTGAACAACTTATGTGACAACTTTTTTTTTCTCTCTTTTCATTGGTCAAAAATAATGGAGAGAGAAAAAAGAAGAGAGAGAATAAGAATATAATGTGAGTATGAGAGAGAAAGTTGTCATAAAGTGGTTGTACAAATATCATTTCTCTTAAAATAATAGTGCAAAATGAATCAATGAGTTATACATACAAAAGGGTAACCCTTAAAAATAAAAGTGCAAAATGAATCAATGAGTTATACATACAAAAGGGTAATAAAAATTTATCAACCATAGTATGATTGGTTTAAAAAATAATTTATATTTACATTTTCTGATTGTTTTAACGTTTTAATATACAAAAAAGTGAAGACAATGATTCAAAGTTGCCCTTAACTAATTTGAGAAGATTAATTTCACAATACAAAATTTAATTTTTCATTACAAATTTTTTATGCCGTGGAACAAACAGGAGTTACTATAGGTGCACCAACCCAAGGTGTGGTGCTAAGAAGCAGGTTGAGAGATCCAATGAAGACCCTGACACTCTCATAATCACTTATGAAGGACTCCACTTGCACTTTGCTTATCCTTATTTCATAGTGGGACAATCACATCAATCTCATTCCCATCCACCAATGAAGAAGTCCAAGGCTACCTCTTCACAAGGACCAACCCAAGACCATAAAGCAAGTGAAGTTCATGAAGGTCAGAATATACAGGAAGTCCATGAAGCCCAATCTAGTAATTCTTTGGAACTCATTTCACCCATTTTATTGGACCGTACACAAGATACGGTCCAAGAAAATTTCGGCTCAGAAGGGTTGCTTGAAGATATGGTGCCATTCATGTTTAGGAACCCTACAAACAATGTAGATAGTGATGATTACTCAAAATTTTCCTTCTCCTCACACATTTCTCCTCCAGCATCATGGACTTCTGGTTTTTCCACTTCCACCTCTTGTTATGCAGTTGGCTTAAATCCTAGTGTTTAA
Protein sequence

>MS.gene96858.t1

MIDSSMSKTMMEKIMSSNWSEDDELLRELLVDESPLLMLPHERVSEVTNLSHDSSKDQAFNRVSILERSLSKIENKYTLKIKCFGNGLGDDGYRWRKYGQKSIKNSPNPRSYYRCTNPRCGAKKQVERSNEDPDTLIITYEGLHLHFAYPYFIVGQSHQSHSHPPMKKSKATSSQGPTQDHKASEVHEGQNIQEVHEAQSSNSLELISPILLDRTQDTVQENFGSEGLLEDMVPFMFRNPTNNVDSDDYSKFSFSSHISPPASWTSGFSTSTSCYAVGLNPSV