AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene96865

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene96865.t1 MTR_7g062120 96.097 743 28 1 1 743 1 742 0.0 1487
MS.gene96865.t1 MTR_4g064160 48.401 688 328 8 61 743 21 686 0.0 617
MS.gene96865.t1 MTR_2g097410 45.152 722 335 15 54 743 51 743 0.0 561
MS.gene96865.t1 MTR_4g064150 45.207 699 327 17 60 743 78 735 0.0 544
MS.gene96865.t1 MTR_2g097467 44.461 677 308 12 69 743 46 656 0.0 542
MS.gene96865.t1 MTR_2g097473 44.591 684 297 16 69 743 46 656 0.0 534
MS.gene96865.t1 MTR_4g064120 44.135 682 297 17 67 743 26 628 1.19e-180 530
MS.gene96865.t1 MTR_2g097463 43.271 691 307 16 64 743 41 657 4.28e-180 530
MS.gene96865.t1 MTR_4g064180 43.255 682 303 16 67 743 26 628 6.70e-176 518
MS.gene96865.t1 MTR_4g064200 52.132 516 231 7 238 743 143 652 5.94e-175 516
MS.gene96865.t1 MTR_2g097310 49.883 429 204 5 322 743 216 640 2.02e-152 458
MS.gene96865.t1 MTR_2g097350 52.972 387 176 3 359 743 260 642 2.08e-149 450
MS.gene96865.t1 MTR_2g097390 50.119 419 198 5 332 743 229 643 8.49e-146 441
MS.gene96865.t1 MTR_2g097380 49.185 368 152 5 378 743 229 563 2.29e-125 385
MS.gene96865.t1 MTR_5g097480 32.976 373 249 1 369 741 173 544 3.95e-66 229
MS.gene96865.t1 MTR_2g026250 29.867 375 261 2 368 741 223 596 1.32e-60 215
MS.gene96865.t1 MTR_4g133660 30.481 374 258 2 368 740 170 542 4.09e-60 212
MS.gene96865.t1 MTR_1g029420 31.806 371 252 1 371 741 223 592 8.53e-60 213
MS.gene96865.t1 MTR_3g056110 30.053 376 256 4 369 741 171 542 5.21e-59 209
MS.gene96865.t1 MTR_2g082090 30.645 372 257 1 369 740 208 578 2.89e-58 208
MS.gene96865.t1 MTR_7g027190 29.684 475 286 10 284 741 230 673 5.64e-57 206
MS.gene96865.t1 MTR_5g094450 29.949 394 262 7 358 741 143 532 8.36e-57 203
MS.gene96865.t1 MTR_3g089055 29.650 371 260 1 371 741 201 570 5.26e-55 199
MS.gene96865.t1 MTR_3g089055 29.650 371 260 1 371 741 196 565 5.62e-55 198
MS.gene96865.t1 MTR_4g104020 29.610 385 248 6 370 741 146 520 3.98e-50 184
MS.gene96865.t1 MTR_3g065980 30.612 392 236 8 368 741 167 540 1.92e-47 177
MS.gene96865.t1 MTR_7g074650 30.055 366 242 5 377 742 442 793 8.22e-47 179
MS.gene96865.t1 MTR_8g442410 30.326 399 244 8 363 743 145 527 1.33e-46 174
MS.gene96865.t1 MTR_4g076140 26.402 428 250 4 373 741 48 469 3.96e-43 163
MS.gene96865.t1 MTR_3g022830 27.446 419 245 7 374 741 26 436 1.84e-40 154
MS.gene96865.t1 MTR_2g034260 28.316 392 259 10 364 741 201 584 4.35e-38 150
MS.gene96865.t1 MTR_2g089100 28.293 410 245 10 370 743 49 445 2.03e-37 146
MS.gene96865.t1 MTR_2g034250 26.904 394 263 9 364 741 201 585 2.02e-36 145
MS.gene96865.t1 MTR_7g109580 29.563 389 241 10 368 741 184 554 5.47e-36 144
MS.gene96865.t1 MTR_4g076020 27.778 378 228 9 377 743 88 431 5.77e-36 141
MS.gene96865.t1 MTR_4g102790 24.935 385 269 7 369 742 288 663 3.51e-35 142
MS.gene96865.t1 MTR_4g097080 26.247 381 265 8 371 742 131 504 1.58e-34 138
MS.gene96865.t1 MTR_1g096030 28.141 398 239 14 373 741 80 459 1.90e-34 137
MS.gene96865.t1 MTR_1g069725 27.033 418 265 14 343 740 65 462 1.04e-33 135
MS.gene96865.t1 MTR_2g034280 25.897 390 269 8 364 741 194 575 1.42e-32 134
MS.gene96865.t1 MTR_1g086970 26.667 390 258 13 368 741 101 478 8.57e-32 130
MS.gene96865.t1 MTR_4g077760 24.368 435 309 9 315 741 133 555 5.76e-31 129
MS.gene96865.t1 MTR_5g015490 26.234 385 262 6 373 742 114 491 1.58e-30 126
MS.gene96865.t1 MTR_3g072710 27.688 372 229 10 392 740 145 499 2.27e-27 117
MS.gene96865.t1 MTR_7g057230 26.621 293 194 6 458 740 375 656 5.37e-26 114
MS.gene96865.t1 MTR_5g009080 30.556 216 140 3 373 584 56 265 1.13e-24 108
MS.gene96865.t1 MTR_5g009080 29.252 147 104 0 595 741 332 478 2.04e-16 83.2
MS.gene96865.t1 MTR_6g047750 24.346 382 260 11 374 741 296 662 3.93e-24 108
MS.gene96865.t1 MTR_5g058860 24.750 400 255 12 370 740 114 496 1.81e-23 105
MS.gene96865.t1 MTR_5g015950 21.905 420 279 8 370 743 32 448 2.46e-23 104
MS.gene96865.t1 MTR_3g053270 21.905 420 279 8 370 743 32 448 2.46e-23 104
MS.gene96865.t1 MTR_4g095500 24.286 420 267 10 370 743 56 470 3.30e-23 103
MS.gene96865.t1 MTR_8g093070 25.750 400 252 16 361 743 127 498 1.29e-22 102
MS.gene96865.t1 MTR_2g099110 27.667 300 203 5 373 667 74 364 1.56e-22 101
MS.gene96865.t1 MTR_8g020840 24.747 396 253 14 373 741 171 548 2.72e-18 89.4
MS.gene96865.t1 MTR_0092s0100 22.222 378 262 6 374 741 376 731 1.52e-15 81.3
MS.gene96865.t1 MTR_0092s0100 22.222 378 262 6 374 741 373 728 1.65e-15 81.3
MS.gene96865.t1 MTR_4g026485 20.976 410 274 11 349 741 248 624 3.11e-14 76.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene96865.t1 AT2G37650 52.639 682 269 11 72 742 64 702 0.0 661
MS.gene96865.t1 AT2G37650 52.639 682 269 11 72 742 76 714 0.0 661
MS.gene96865.t1 AT1G07530 45.548 775 369 18 8 743 7 767 0.0 604
MS.gene96865.t1 AT2G29060 45.468 684 282 14 70 742 53 656 0.0 562
MS.gene96865.t1 AT2G29060 45.918 686 313 13 70 742 53 693 0.0 561
MS.gene96865.t1 AT2G29065 45.581 577 270 10 179 743 86 630 5.27e-158 472
MS.gene96865.t1 AT1G07520 40.594 707 352 16 51 743 43 695 5.73e-156 469
MS.gene96865.t1 AT1G07520 40.594 707 352 16 51 743 44 696 6.44e-156 469
MS.gene96865.t1 AT5G59450 47.569 473 235 6 276 743 136 600 2.91e-153 459
MS.gene96865.t1 AT1G07520 45.848 554 253 12 204 743 11 531 7.38e-152 453
MS.gene96865.t1 AT1G07520 45.848 554 253 12 204 743 11 531 7.38e-152 453
MS.gene96865.t1 AT3G46600 51.880 399 189 2 347 743 184 581 4.72e-143 432
MS.gene96865.t1 AT3G46600 43.182 88 41 2 43 121 19 106 5.92e-11 66.2
MS.gene96865.t1 AT3G46600 51.880 399 189 2 347 743 152 549 5.74e-143 431
MS.gene96865.t1 AT3G46600 53.209 374 174 1 370 743 1 373 4.47e-141 419
MS.gene96865.t1 AT4G17230 33.867 375 247 1 368 742 153 526 2.15e-64 224
MS.gene96865.t1 AT4G17230 33.867 375 247 1 368 742 153 526 2.15e-64 224
MS.gene96865.t1 AT1G50600 32.976 373 249 1 369 741 155 526 3.00e-63 220
MS.gene96865.t1 AT5G48150 31.818 374 253 2 369 741 118 490 4.11e-63 219
MS.gene96865.t1 AT5G48150 31.818 374 253 2 369 741 118 490 4.11e-63 219
MS.gene96865.t1 AT5G48150 31.818 374 253 2 369 741 118 490 4.11e-63 219
MS.gene96865.t1 AT5G48150 31.818 374 253 2 369 741 118 490 4.11e-63 219
MS.gene96865.t1 AT1G50600 32.976 373 249 1 369 741 226 597 1.36e-62 220
MS.gene96865.t1 AT1G50600 32.976 373 249 1 369 741 230 601 1.90e-62 220
MS.gene96865.t1 AT2G04890 31.099 373 249 2 369 741 49 413 1.08e-60 210
MS.gene96865.t1 AT1G21450 29.765 383 260 4 365 741 214 593 5.26e-54 196
MS.gene96865.t1 AT1G14920 32.987 385 225 11 368 741 167 529 2.95e-49 182
MS.gene96865.t1 AT3G03450 31.362 389 235 9 368 743 178 547 6.38e-49 181
MS.gene96865.t1 AT3G54220 29.952 414 270 7 335 742 252 651 1.96e-47 179
MS.gene96865.t1 AT1G66350 32.615 371 227 10 374 741 156 506 6.60e-47 174
MS.gene96865.t1 AT2G01570 31.771 384 231 12 368 741 219 581 1.37e-46 175
MS.gene96865.t1 AT5G17490 29.793 386 239 9 368 743 155 518 3.34e-44 167
MS.gene96865.t1 AT1G50420 24.942 429 256 5 373 741 57 479 1.58e-41 159
MS.gene96865.t1 AT5G66770 27.493 371 253 8 377 741 224 584 1.61e-40 157
MS.gene96865.t1 AT5G41920 27.737 411 265 10 343 741 10 400 2.06e-35 139
MS.gene96865.t1 AT4G37650 25.255 392 266 8 372 742 145 530 1.77e-34 139
MS.gene96865.t1 AT3G50650 25.070 359 252 5 391 741 193 542 1.32e-32 133
MS.gene96865.t1 AT5G52510 24.870 386 264 7 371 741 266 640 1.54e-32 134
MS.gene96865.t1 AT1G63100 26.606 327 228 5 369 691 273 591 6.81e-30 126
MS.gene96865.t1 AT1G63100 26.606 327 228 5 369 691 248 566 7.62e-30 126
MS.gene96865.t1 AT1G55580 24.879 414 260 9 370 741 41 445 5.81e-26 112
MS.gene96865.t1 AT3G49950 26.531 392 260 10 370 742 27 409 5.35e-23 102
MS.gene96865.t1 AT4G08250 24.714 437 301 12 320 740 52 476 2.07e-20 95.9
MS.gene96865.t1 AT3G13840 25.408 429 270 15 332 741 113 510 4.08e-20 95.1

Find 152 sgRNAs with CRISPR-Local

Find 185 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAAATCTTAAAGGGTATTT+TGG 0.117928 7.3:-43165786 MS.gene96865:CDS
TGATTAGTCCTTTATAAATT+TGG 0.135271 7.3:+43164515 None:intergenic
TTCATTCACGGTATTGTTAA+TGG 0.176706 7.3:-43163980 MS.gene96865:CDS
CTTTCTTTGTTACTCGATTT+AGG 0.193366 7.3:-43163943 MS.gene96865:CDS
ACCTTGCAGCTTGCCCTTTC+CGG 0.197040 7.3:-43164447 MS.gene96865:CDS
TTTGATCAAAGTATAGAATT+TGG 0.228289 7.3:-43165690 MS.gene96865:CDS
ACTTTCCACAACCTGGTTTC+AGG 0.235016 7.3:-43164255 MS.gene96865:CDS
TTTCTTTGTTACTCGATTTA+GGG 0.239290 7.3:-43163942 MS.gene96865:CDS
ATGATGGATCAAAATCTTAA+AGG 0.262809 7.3:-43165795 MS.gene96865:CDS
AACAAAGAAAGGAGCATTAA+AGG 0.262853 7.3:+43163955 None:intergenic
CAGAATCAAAGATTTGAAAA+TGG 0.277754 7.3:-43165717 MS.gene96865:CDS
AAGTACCCGGTTTCGCCATT+AGG 0.291862 7.3:-43165447 MS.gene96865:CDS
AGACAGCACTCAAACGCTTT+TGG 0.293613 7.3:-43164607 MS.gene96865:CDS
ATAGACTTTGGTATCCTCTA+TGG 0.301006 7.3:-43164355 MS.gene96865:CDS
ACGTTCCTGCTTCATAGTTT+AGG 0.305136 7.3:-43164856 MS.gene96865:CDS
CATCCTTATGGAAGAAGATA+TGG 0.310452 7.3:-43165547 MS.gene96865:CDS
GCTAATAAGTTTCTCCCTAA+TGG 0.314940 7.3:-43165108 MS.gene96865:CDS
GAAAGAGGCCATTTCCATTA+GGG 0.330219 7.3:+43165094 None:intergenic
CGATGGCCTTGAGGCACGTT+TGG 0.343289 7.3:-43164551 MS.gene96865:CDS
GAAGCTCAATTTCCTCATAA+TGG 0.346990 7.3:-43165291 MS.gene96865:CDS
TGAAAGAGGCCATTTCCATT+AGG 0.351396 7.3:+43165093 None:intergenic
AGTACCCGGTTTCGCCATTA+GGG 0.358310 7.3:-43165446 MS.gene96865:CDS
AATCTTTGATTCTGAAGAAC+AGG 0.366185 7.3:+43165726 None:intergenic
ATACCGTGAATGAATATATT+CGG 0.372722 7.3:+43163989 None:intergenic
TTACCGTGGTAGAAACTTGC+TGG 0.375708 7.3:-43164074 MS.gene96865:CDS
TTACATCAATAACATCCTTA+TGG 0.377855 7.3:-43165559 MS.gene96865:CDS
TATCGTGCCTCGCGAGGATT+GGG 0.380868 7.3:-43163876 MS.gene96865:CDS
CTTCCATATCTTCTTCCATA+AGG 0.384242 7.3:+43165544 None:intergenic
AGACTTTGAGGTTTCCCTAA+TGG 0.384783 7.3:+43165432 None:intergenic
TTTCCTTGAAAACCATTATG+AGG 0.391556 7.3:+43165279 None:intergenic
GGTTTCCCTAATGGCGAAAC+CGG 0.392314 7.3:+43165441 None:intergenic
GGCCTTGAGGCACGTTTGGC+TGG 0.393996 7.3:-43164547 MS.gene96865:CDS
ACAGGAAGCCAAATTTATAA+AGG 0.398179 7.3:-43164523 MS.gene96865:CDS
TGATGGATCAAAATCTTAAA+GGG 0.398790 7.3:-43165794 MS.gene96865:CDS
CGAAGTTTCGGCGGTCCTCC+TGG 0.408211 7.3:+43164292 None:intergenic
TTTGTTGCGTTCAACTATGA+TGG 0.408586 7.3:-43164881 MS.gene96865:CDS
TCGTTTACGCACTTTCTTGT+TGG 0.408613 7.3:-43163598 MS.gene96865:CDS
AGACAAAACTAGTCATCTTC+CGG 0.409694 7.3:+43164428 None:intergenic
GTGTGGATGCTTCCTTCCCT+TGG 0.410286 7.3:+43164966 None:intergenic
GCAAAGATTGATTCCTCAAC+TGG 0.410610 7.3:+43165748 None:intergenic
TGCCATTGCCTGTATGTCTC+TGG 0.414792 7.3:+43163770 None:intergenic
GTTTCACTACTAAGACTTTG+AGG 0.420199 7.3:+43165420 None:intergenic
GTTTCCGCGCAAAGAATTGT+TGG 0.420942 7.3:+43165320 None:intergenic
ATTCCTGTGATCCGAAGTTT+CGG 0.426274 7.3:+43164280 None:intergenic
TTCTTTGCGCGGAAACTTGA+AGG 0.433816 7.3:-43165313 MS.gene96865:CDS
AAGTTTCTCCCTAATGGAAA+TGG 0.436441 7.3:-43165102 MS.gene96865:CDS
CAATCTTGAGTTCCTCAAGC+TGG 0.440153 7.3:+43164128 None:intergenic
GCTATGGCATTATACTCAAA+TGG 0.441312 7.3:+43164169 None:intergenic
GTATCGTGCCTCGCGAGGAT+TGG 0.444992 7.3:-43163877 MS.gene96865:CDS
TATAGAAACCGGTTCGCGCT+TGG 0.446581 7.3:-43164218 MS.gene96865:CDS
GAAAGATGAACTATCGGTTA+AGG 0.447378 7.3:-43165025 MS.gene96865:CDS
TAGAGAGGCCAGAGACATAC+AGG 0.447934 7.3:-43163778 MS.gene96865:CDS
AAGTACTGTGGAAGGGACTC+TGG 0.450411 7.3:-43165214 MS.gene96865:CDS
GAGGCACGTTTGGCTGGTAC+AGG 0.458499 7.3:-43164541 MS.gene96865:CDS
AAAGAGCAGTGGAGAAAGTA+AGG 0.458900 7.3:-43163691 MS.gene96865:CDS
GACTATCTTAGTTGTCAAGC+AGG 0.459173 7.3:+43163572 None:intergenic
AGGGTCCATGTTATAGACTT+TGG 0.460977 7.3:-43164367 MS.gene96865:CDS
AAATCCTCAGTTTGATAAGA+AGG 0.464246 7.3:-43164018 MS.gene96865:CDS
AACTAGTCATCTTCCGGAAA+GGG 0.465913 7.3:+43164434 None:intergenic
ATACGCTGCCAAGCGCGAAC+CGG 0.466569 7.3:+43164210 None:intergenic
TTCTCCGGACAGTGATCTAC+AGG 0.473673 7.3:-43165190 MS.gene96865:CDS
ATCGAGGTCGTTGTTGAAGA+AGG 0.474514 7.3:+43165639 None:intergenic
CTAAATCGAGTAACAAAGAA+AGG 0.477974 7.3:+43163944 None:intergenic
GTAGCTTTCGATGTATTACT+TGG 0.479635 7.3:+43164766 None:intergenic
GTTGAAGAAGGTGTGTAATC+AGG 0.485043 7.3:+43165651 None:intergenic
CAGGAGGACCGCCGAAACTT+CGG 0.485753 7.3:-43164291 MS.gene96865:CDS
GGTTATTACAAGGTTGGAAA+GGG 0.487158 7.3:-43163625 MS.gene96865:CDS
GCAAGTGGTTATTACAAGGT+TGG 0.488276 7.3:-43163631 MS.gene96865:CDS
GTTTCTATAATTCTCTCTGC+AGG 0.493560 7.3:+43164232 None:intergenic
GAAAGTCTTTGTATGAAAGT+AGG 0.500451 7.3:+43164322 None:intergenic
CATCGAAAGCTACGACTAGT+AGG 0.501175 7.3:-43164756 MS.gene96865:CDS
CTCTCTGCAGGCCTGAAACC+AGG 0.501776 7.3:+43164244 None:intergenic
CAAATTCGTATTCTTAGAGC+CGG 0.503523 7.3:-43163749 MS.gene96865:CDS
TTTGTATGAAAGTAGGCCAT+TGG 0.503852 7.3:+43164329 None:intergenic
AAACCGAATATATTCATTCA+CGG 0.506223 7.3:-43163992 MS.gene96865:CDS
GTATCCTCTATGGTTTCCAA+TGG 0.508744 7.3:-43164345 MS.gene96865:CDS
GCAGAGAGAATTATAGAAAC+CGG 0.512723 7.3:-43164229 MS.gene96865:CDS
GGAAGGGACTCTGGATTCTC+CGG 0.514892 7.3:-43165205 MS.gene96865:CDS
TGGTTATTACAAGGTTGGAA+AGG 0.521643 7.3:-43163626 MS.gene96865:CDS
GCAGGCCTGAAACCAGGTTG+TGG 0.523298 7.3:+43164250 None:intergenic
AGCTTGTGAAGGTTGTGAGA+GGG 0.527661 7.3:-43163801 MS.gene96865:CDS
CATCTCCTAAACTATGAAGC+AGG 0.528029 7.3:+43164851 None:intergenic
CCGCCGAAACTTCGGATCAC+AGG 0.530115 7.3:-43164283 MS.gene96865:CDS
GGAATAGACTTTCCACAACC+TGG 0.535328 7.3:-43164262 MS.gene96865:CDS
TCAGAAAATTCACACTCCTC+AGG 0.542538 7.3:+43165594 None:intergenic
AGTTCATCTTTCATCACTCT+AGG 0.543252 7.3:+43165036 None:intergenic
GATAGCAAGTGGTTATTACA+AGG 0.548641 7.3:-43163635 MS.gene96865:CDS
CTGTGGTAGTCGACAGTCCA+AGG 0.548946 7.3:-43164045 MS.gene96865:CDS
TATGGTACTTGTGTTGATGA+TGG 0.553757 7.3:-43165363 MS.gene96865:CDS
TTGGCTCATATATTTGCCGA+TGG 0.554111 7.3:-43164568 MS.gene96865:CDS
AATTCACACTCCTCAGGAGA+AGG 0.554993 7.3:+43165600 None:intergenic
TGAAAGTATCGTGCCTCGCG+AGG 0.557299 7.3:-43163882 MS.gene96865:CDS
TGGAGATGGAAATCAGCGGT+TGG 0.560835 7.3:-43164587 MS.gene96865:CDS
AGTGTAAGAAGTACTGTGGA+AGG 0.562912 7.3:-43165222 MS.gene96865:CDS
CTTGAGTTCCTCAAGCTGGA+TGG 0.564439 7.3:+43164132 None:intergenic
AAGCTACGACTAGTAGGAAA+GGG 0.568799 7.3:-43164750 MS.gene96865:CDS
TGTTCTTTGTGCACAAGCTG+TGG 0.571979 7.3:-43164674 MS.gene96865:CDS
AAACTAGTCATCTTCCGGAA+AGG 0.572499 7.3:+43164433 None:intergenic
GAAACCTGTAGATCACTGTC+CGG 0.574131 7.3:+43165186 None:intergenic
CTCCACTGCTCTTTCTACCG+TGG 0.574565 7.3:+43163700 None:intergenic
GGCCAGAGACATACAGGCAA+TGG 0.575120 7.3:-43163772 MS.gene96865:CDS
TCCGGAAAGGGCAAGCTGCA+AGG 0.577684 7.3:+43164446 None:intergenic
TTCCTCATGTGTCGAAATCG+AGG 0.578452 7.3:+43165623 None:intergenic
GTTTCAAAAGGGTGTTGAGG+AGG 0.582089 7.3:-43165130 MS.gene96865:CDS
CAAACGTGCCTCAAGGCCAT+CGG 0.583143 7.3:+43164552 None:intergenic
CTTTGTTACTCGATTTAGGG+AGG 0.585134 7.3:-43163939 MS.gene96865:CDS
TACCAGCCAAACGTGCCTCA+AGG 0.585310 7.3:+43164545 None:intergenic
ATGGACCCTCATTGAACTTG+CGG 0.586513 7.3:+43164381 None:intergenic
AGTGATGAAAGATGAACTAT+CGG 0.587276 7.3:-43165031 MS.gene96865:CDS
CAAAGACTTTCATTACGACC+AGG 0.587494 7.3:-43164310 MS.gene96865:CDS
TAGCTTGTGAAGGTTGTGAG+AGG 0.587556 7.3:-43163802 MS.gene96865:CDS
AAAGCTACGACTAGTAGGAA+AGG 0.590220 7.3:-43164751 MS.gene96865:CDS
AAATTCGTATTCTTAGAGCC+GGG 0.595644 7.3:-43163748 MS.gene96865:CDS
ATGGGACACCATCCAGCTTG+AGG 0.596627 7.3:-43164140 MS.gene96865:CDS
TGATCCTTCTTATCAAACTG+AGG 0.602637 7.3:+43164014 None:intergenic
TAGGCCATTGGAAACCATAG+AGG 0.604324 7.3:+43164341 None:intergenic
AAGGTTGTGAGAGGGTAGAG+AGG 0.605831 7.3:-43163793 MS.gene96865:CDS
ATCATAGTTGAACGCAACAA+AGG 0.606015 7.3:+43164883 None:intergenic
AGTAGTGAAACTGATGGTGT+TGG 0.608255 7.3:-43165408 MS.gene96865:CDS
AAACTTGCTGGATGAATCTG+TGG 0.612156 7.3:-43164062 MS.gene96865:CDS
TTTACCAACAATTCTTTGCG+CGG 0.613278 7.3:-43165324 MS.gene96865:CDS
TTGAATGTTATAGCTTGTGA+AGG 0.613935 7.3:-43163812 MS.gene96865:CDS
GTTTCCCTAATGGCGAAACC+GGG 0.614634 7.3:+43165442 None:intergenic
CCTGTGATCCGAAGTTTCGG+CGG 0.615573 7.3:+43164283 None:intergenic
AATCTGCCGCAAGTTCAATG+AGG 0.619310 7.3:-43164387 MS.gene96865:CDS
ATCTGCCGCAAGTTCAATGA+GGG 0.620148 7.3:-43164386 MS.gene96865:CDS
TAATCGACGAAGATAGCAAG+TGG 0.622111 7.3:-43163646 MS.gene96865:CDS
GTGTAAGAAGTACTGTGGAA+GGG 0.623721 7.3:-43165221 MS.gene96865:CDS
TATATTTGCCGATGGCCTTG+AGG 0.628661 7.3:-43164560 MS.gene96865:CDS
TAAGGACGAGAAGGATGAGA+GGG 0.633129 7.3:-43165007 MS.gene96865:CDS
TGCCTCGCGAGGATTGGGAA+AGG 0.638817 7.3:-43163871 MS.gene96865:CDS
TTAAGGACGAGAAGGATGAG+AGG 0.641254 7.3:-43165008 MS.gene96865:CDS
ACGACTAGTAGGAAAGGGCG+AGG 0.643128 7.3:-43164745 MS.gene96865:CDS
GCAGTTTCAAAAGGGTGTTG+AGG 0.643820 7.3:-43165133 MS.gene96865:CDS
AGTCTTAGTAGTGAAACTGA+TGG 0.650092 7.3:-43165414 MS.gene96865:CDS
ACATGAGGAACCTTCTCCTG+AGG 0.651054 7.3:-43165610 MS.gene96865:CDS
CGTCGATTACAAAATCCTTG+TGG 0.652977 7.3:+43163660 None:intergenic
CAACAAATGAGATCCAGTTG+AGG 0.654653 7.3:-43165761 MS.gene96865:CDS
ATGTCTACTTCTCCTCCGTG+TGG 0.655238 7.3:+43164949 None:intergenic
ATCCTTTCCCAATCCTCGCG+AGG 0.655939 7.3:+43163869 None:intergenic
ACTATCGGTTAAGGACGAGA+AGG 0.656821 7.3:-43165016 MS.gene96865:CDS
AAATAGTGTAAGAAGTACTG+TGG 0.657910 7.3:-43165226 MS.gene96865:CDS
TCTTTGTGCACAAGCTGTGG+CGG 0.664334 7.3:-43164671 MS.gene96865:CDS
AAGGGAAGGAAGCATCCACA+CGG 0.668895 7.3:-43164964 MS.gene96865:CDS
AACCACGGTAGAAAGAGCAG+TGG 0.669300 7.3:-43163702 MS.gene96865:CDS
GGATACCAAAGTCTATAACA+TGG 0.671335 7.3:+43164362 None:intergenic
CATCCAGCAAGTTTCTACCA+CGG 0.681365 7.3:+43164071 None:intergenic
GAAGAAGGTGTGTAATCAGG+TGG 0.694631 7.3:+43165654 None:intergenic
AGTAAGGTCTAGCTACCACA+AGG 0.698237 7.3:-43163675 MS.gene96865:CDS
GACCTCGATTTCGACACATG+AGG 0.702383 7.3:-43165625 MS.gene96865:CDS
AGACTTTCATTACGACCAGG+AGG 0.714994 7.3:-43164307 MS.gene96865:CDS
GGAAGGAAGCATCCACACGG+AGG 0.726324 7.3:-43164961 MS.gene96865:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTACTTTTTTGATAATTA+TGG - chr7.3:43164000-43164019 MS.gene96865:CDS 10.0%
!! TAATTGAAAAAGAGATATTT+GGG - chr7.3:43165537-43165556 MS.gene96865:CDS 15.0%
!! CTAATTGAAAAAGAGATATT+TGG - chr7.3:43165536-43165555 MS.gene96865:CDS 20.0%
!! TTTGATCAAAGTATAGAATT+TGG - chr7.3:43163691-43163710 MS.gene96865:CDS 20.0%
!!! AAATCATTTTACGAAGTTAT+AGG - chr7.3:43163907-43163926 MS.gene96865:CDS 20.0%
!!! TGATTAGTCCTTTATAAATT+TGG + chr7.3:43164869-43164888 None:intergenic 20.0%
! AAACCGAATATATTCATTCA+CGG - chr7.3:43165389-43165408 MS.gene96865:CDS 25.0%
! ATAATGCCATAGCAAAAAAA+TGG - chr7.3:43165222-43165241 MS.gene96865:CDS 25.0%
! ATACCGTGAATGAATATATT+CGG + chr7.3:43165395-43165414 None:intergenic 25.0%
! CAGAATCAAAGATTTGAAAA+TGG - chr7.3:43163664-43163683 MS.gene96865:CDS 25.0%
! TAAAAAACAAAACGGGAAAA+AGG - chr7.3:43164659-43164678 MS.gene96865:CDS 25.0%
! TAATGCCATAGCAAAAAAAT+GGG - chr7.3:43165223-43165242 MS.gene96865:CDS 25.0%
! TTACATCAATAACATCCTTA+TGG - chr7.3:43163822-43163841 MS.gene96865:CDS 25.0%
! TTTCTTTGTTACTCGATTTA+GGG - chr7.3:43165439-43165458 MS.gene96865:CDS 25.0%
!! TGATGGATCAAAATCTTAAA+GGG - chr7.3:43163587-43163606 MS.gene96865:CDS 25.0%
!!! ATGATGGATCAAAATCTTAA+AGG - chr7.3:43163586-43163605 MS.gene96865:CDS 25.0%
!!! CAAAATCTTAAAGGGTATTT+TGG - chr7.3:43163595-43163614 MS.gene96865:CDS 25.0%
!!! CAACATCAAAATTTTGAAAG+AGG + chr7.3:43164305-43164324 None:intergenic 25.0%
AAATCCTCAGTTTGATAAGA+AGG - chr7.3:43165363-43165382 MS.gene96865:CDS 30.0%
ACAGGAAGCCAAATTTATAA+AGG - chr7.3:43164858-43164877 MS.gene96865:CDS 30.0%
AGTGATGAAAGATGAACTAT+CGG - chr7.3:43164350-43164369 MS.gene96865:CDS 30.0%
CTAAATCGAGTAACAAAGAA+AGG + chr7.3:43165440-43165459 None:intergenic 30.0%
CTTTCTTTGTTACTCGATTT+AGG - chr7.3:43165438-43165457 MS.gene96865:CDS 30.0%
GAAAGTCTTTGTATGAAAGT+AGG + chr7.3:43165062-43165081 None:intergenic 30.0%
TGAAAAAGAGATATTTGGGA+AGG - chr7.3:43165541-43165560 MS.gene96865:CDS 30.0%
TTCATTCACGGTATTGTTAA+TGG - chr7.3:43165401-43165420 MS.gene96865:CDS 30.0%
TTTCCTTGAAAACCATTATG+AGG + chr7.3:43164105-43164124 None:intergenic 30.0%
! AAACTGAGGATTTTATTCCT+TGG + chr7.3:43165356-43165375 None:intergenic 30.0%
! AATCTTTGATTCTGAAGAAC+AGG + chr7.3:43163658-43163677 None:intergenic 30.0%
! ACCAATTTTGCAGTTTCAAA+AGG - chr7.3:43164239-43164258 MS.gene96865:CDS 30.0%
! CCAATTTTGCAGTTTCAAAA+GGG - chr7.3:43164240-43164259 MS.gene96865:CDS 30.0%
! TCTTTTCTTTTTGGATCCAA+GGG - chr7.3:43164399-43164418 MS.gene96865:CDS 30.0%
! TGTTGGTAAAAATGCTACTA+AGG + chr7.3:43164047-43164066 None:intergenic 30.0%
! TTCTTTTCTTTTTGGATCCA+AGG - chr7.3:43164398-43164417 MS.gene96865:CDS 30.0%
! TTGAATGTTATAGCTTGTGA+AGG - chr7.3:43165569-43165588 MS.gene96865:CDS 30.0%
! TTTCCTCATAATGGTTTTCA+AGG - chr7.3:43164099-43164118 MS.gene96865:CDS 30.0%
!! AAATAGTGTAAGAAGTACTG+TGG - chr7.3:43164155-43164174 MS.gene96865:CDS 30.0%
!! AACAAAGAAAGGAGCATTAA+AGG + chr7.3:43165429-43165448 None:intergenic 30.0%
AAATTCGTATTCTTAGAGCC+GGG - chr7.3:43165633-43165652 MS.gene96865:CDS 35.0%
AAGTTTCTCCCTAATGGAAA+TGG - chr7.3:43164279-43164298 MS.gene96865:CDS 35.0%
AGACAAAACTAGTCATCTTC+CGG + chr7.3:43164956-43164975 None:intergenic 35.0%
AGTCTTAGTAGTGAAACTGA+TGG - chr7.3:43163967-43163986 MS.gene96865:CDS 35.0%
AGTTCATCTTTCATCACTCT+AGG + chr7.3:43164348-43164367 None:intergenic 35.0%
ATAGACTTTGGTATCCTCTA+TGG - chr7.3:43165026-43165045 MS.gene96865:CDS 35.0%
ATCATAGTTGAACGCAACAA+AGG + chr7.3:43164501-43164520 None:intergenic 35.0%
CAAATTCGTATTCTTAGAGC+CGG - chr7.3:43165632-43165651 MS.gene96865:CDS 35.0%
CATCCTTATGGAAGAAGATA+TGG - chr7.3:43163834-43163853 MS.gene96865:CDS 35.0%
CTTCCATATCTTCTTCCATA+AGG + chr7.3:43163840-43163859 None:intergenic 35.0%
GAAGCTCAATTTCCTCATAA+TGG - chr7.3:43164090-43164109 MS.gene96865:CDS 35.0%
GATAGCAAGTGGTTATTACA+AGG - chr7.3:43165746-43165765 MS.gene96865:CDS 35.0%
GCAGAGAGAATTATAGAAAC+CGG - chr7.3:43165152-43165171 MS.gene96865:CDS 35.0%
GCTAATAAGTTTCTCCCTAA+TGG - chr7.3:43164273-43164292 MS.gene96865:CDS 35.0%
GCTATGGCATTATACTCAAA+TGG + chr7.3:43165215-43165234 None:intergenic 35.0%
GGATACCAAAGTCTATAACA+TGG + chr7.3:43165022-43165041 None:intergenic 35.0%
GGTAAAAACAGGTAACAACT+AGG + chr7.3:43165292-43165311 None:intergenic 35.0%
GGTTATTACAAGGTTGGAAA+GGG - chr7.3:43165756-43165775 MS.gene96865:CDS 35.0%
GTAGCTTTCGATGTATTACT+TGG + chr7.3:43164618-43164637 None:intergenic 35.0%
GTTTCACTACTAAGACTTTG+AGG + chr7.3:43163964-43163983 None:intergenic 35.0%
GTTTCTATAATTCTCTCTGC+AGG + chr7.3:43165152-43165171 None:intergenic 35.0%
TGATCCTTCTTATCAAACTG+AGG + chr7.3:43165370-43165389 None:intergenic 35.0%
TGGTTATTACAAGGTTGGAA+AGG - chr7.3:43165755-43165774 MS.gene96865:CDS 35.0%
TTTACCAACAATTCTTTGCG+CGG - chr7.3:43164057-43164076 MS.gene96865:CDS 35.0%
TTTGTATGAAAGTAGGCCAT+TGG + chr7.3:43165055-43165074 None:intergenic 35.0%
TTTGTTGCGTTCAACTATGA+TGG - chr7.3:43164500-43164519 MS.gene96865:CDS 35.0%
! AGATGCTAAGACGCATTTTA+CGG - chr7.3:43164548-43164567 MS.gene96865:CDS 35.0%
! GAAAGATGAACTATCGGTTA+AGG - chr7.3:43164356-43164375 MS.gene96865:CDS 35.0%
! GAGAGGGATTCTTTTCTTTT+TGG - chr7.3:43164390-43164409 MS.gene96865:CDS 35.0%
! TATGGTACTTGTGTTGATGA+TGG - chr7.3:43164018-43164037 MS.gene96865:CDS 35.0%
!! AGTTATAGGCAAAAAGTACC+CGG - chr7.3:43163921-43163940 MS.gene96865:CDS 35.0%
!!! CCCTTTTGAAACTGCAAAAT+TGG + chr7.3:43164243-43164262 None:intergenic 35.0%
AAAAGCCTGTTGCAAAAACC+CGG + chr7.3:43165654-43165673 None:intergenic 40.0%
AAACTAGTCATCTTCCGGAA+AGG + chr7.3:43164951-43164970 None:intergenic 40.0%
AAAGAGCAGTGGAGAAAGTA+AGG - chr7.3:43165690-43165709 MS.gene96865:CDS 40.0%
AAAGCTACGACTAGTAGGAA+AGG - chr7.3:43164630-43164649 MS.gene96865:CDS 40.0%
AACTAGTCATCTTCCGGAAA+GGG + chr7.3:43164950-43164969 None:intergenic 40.0%
AAGCTACGACTAGTAGGAAA+GGG - chr7.3:43164631-43164650 MS.gene96865:CDS 40.0%
ACGTTCCTGCTTCATAGTTT+AGG - chr7.3:43164525-43164544 MS.gene96865:CDS 40.0%
AGGGTCCATGTTATAGACTT+TGG - chr7.3:43165014-43165033 MS.gene96865:CDS 40.0%
ATTCCTGTGATCCGAAGTTT+CGG + chr7.3:43165104-43165123 None:intergenic 40.0%
CAAAGACTTTCATTACGACC+AGG - chr7.3:43165071-43165090 MS.gene96865:CDS 40.0%
CAACAAATGAGATCCAGTTG+AGG - chr7.3:43163620-43163639 MS.gene96865:CDS 40.0%
CATCTCCTAAACTATGAAGC+AGG + chr7.3:43164533-43164552 None:intergenic 40.0%
CTTTGTTACTCGATTTAGGG+AGG - chr7.3:43165442-43165461 MS.gene96865:CDS 40.0%
GAAAGAGGCCATTTCCATTA+GGG + chr7.3:43164290-43164309 None:intergenic 40.0%
GCAAGTGGTTATTACAAGGT+TGG - chr7.3:43165750-43165769 MS.gene96865:CDS 40.0%
GGCGAGGTAAAAAACAAAAC+GGG - chr7.3:43164652-43164671 MS.gene96865:CDS 40.0%
GGGCGAGGTAAAAAACAAAA+CGG - chr7.3:43164651-43164670 MS.gene96865:CDS 40.0%
GTATCCTCTATGGTTTCCAA+TGG - chr7.3:43165036-43165055 MS.gene96865:CDS 40.0%
GTTTCTACCACGGTAAAAAC+AGG + chr7.3:43165303-43165322 None:intergenic 40.0%
TAATCGACGAAGATAGCAAG+TGG - chr7.3:43165735-43165754 MS.gene96865:CDS 40.0%
TCAGAAAATTCACACTCCTC+AGG + chr7.3:43163790-43163809 None:intergenic 40.0%
TCGTTTACGCACTTTCTTGT+TGG - chr7.3:43165783-43165802 MS.gene96865:CDS 40.0%
TGAAAGAGGCCATTTCCATT+AGG + chr7.3:43164291-43164310 None:intergenic 40.0%
TTGGCTCATATATTTGCCGA+TGG - chr7.3:43164813-43164832 MS.gene96865:CDS 40.0%
! AGTAGTGAAACTGATGGTGT+TGG - chr7.3:43163973-43163992 MS.gene96865:CDS 40.0%
! CGTCGATTACAAAATCCTTG+TGG + chr7.3:43165724-43165743 None:intergenic 40.0%
! GCAAAGATTGATTCCTCAAC+TGG + chr7.3:43163636-43163655 None:intergenic 40.0%
! GCAACTCATGTGCACTTTTA+TGG + chr7.3:43164743-43164762 None:intergenic 40.0%
! GTTGAAGAAGGTGTGTAATC+AGG + chr7.3:43163733-43163752 None:intergenic 40.0%
! TTCTTTTTGGATCCAAGGGA+AGG - chr7.3:43164403-43164422 MS.gene96865:CDS 40.0%
!! AAACTTGCTGGATGAATCTG+TGG - chr7.3:43165319-43165338 MS.gene96865:CDS 40.0%
!! AGACTTTGAGGTTTCCCTAA+TGG + chr7.3:43163952-43163971 None:intergenic 40.0%
!! AGTGTAAGAAGTACTGTGGA+AGG - chr7.3:43164159-43164178 MS.gene96865:CDS 40.0%
!! CTTTTGGAGATGGAAATCAG+CGG - chr7.3:43164790-43164809 MS.gene96865:CDS 40.0%
!! GTGTAAGAAGTACTGTGGAA+GGG - chr7.3:43164160-43164179 MS.gene96865:CDS 40.0%
!!! GGTGTCCCATTTTTTTGCTA+TGG + chr7.3:43165231-43165250 None:intergenic 40.0%
!!! GTTGTTACCTGTTTTTACCG+TGG - chr7.3:43165293-43165312 MS.gene96865:CDS 40.0%
AATCTGCCGCAAGTTCAATG+AGG - chr7.3:43164994-43165013 MS.gene96865:CDS 45.0%
AATTCACACTCCTCAGGAGA+AGG + chr7.3:43163784-43163803 None:intergenic 45.0%
ACTTTCCACAACCTGGTTTC+AGG - chr7.3:43165126-43165145 MS.gene96865:CDS 45.0%
AGACTTTCATTACGACCAGG+AGG - chr7.3:43165074-43165093 MS.gene96865:CDS 45.0%
AGCTTGTGAAGGTTGTGAGA+GGG - chr7.3:43165580-43165599 MS.gene96865:CDS 45.0%
AGTAAGGTCTAGCTACCACA+AGG - chr7.3:43165706-43165725 MS.gene96865:CDS 45.0%
ATCGAGGTCGTTGTTGAAGA+AGG + chr7.3:43163745-43163764 None:intergenic 45.0%
ATCTGCCGCAAGTTCAATGA+GGG - chr7.3:43164995-43165014 MS.gene96865:CDS 45.0%
ATGGACCCTCATTGAACTTG+CGG + chr7.3:43165003-43165022 None:intergenic 45.0%
CAATCTTGAGTTCCTCAAGC+TGG + chr7.3:43165256-43165275 None:intergenic 45.0%
CATCCAGCAAGTTTCTACCA+CGG + chr7.3:43165313-43165332 None:intergenic 45.0%
CATCGAAAGCTACGACTAGT+AGG - chr7.3:43164625-43164644 MS.gene96865:CDS 45.0%
GAAACCTGTAGATCACTGTC+CGG + chr7.3:43164198-43164217 None:intergenic 45.0%
GGAATAGACTTTCCACAACC+TGG - chr7.3:43165119-43165138 MS.gene96865:CDS 45.0%
GTTTCCGCGCAAAGAATTGT+TGG + chr7.3:43164064-43164083 None:intergenic 45.0%
TAAGGACGAGAAGGATGAGA+GGG - chr7.3:43164374-43164393 MS.gene96865:CDS 45.0%
TAGGCCATTGGAAACCATAG+AGG + chr7.3:43165043-43165062 None:intergenic 45.0%
TGTTCTTTGTGCACAAGCTG+TGG - chr7.3:43164707-43164726 MS.gene96865:CDS 45.0%
TTAAGGACGAGAAGGATGAG+AGG - chr7.3:43164373-43164392 MS.gene96865:CDS 45.0%
TTACCGTGGTAGAAACTTGC+TGG - chr7.3:43165307-43165326 MS.gene96865:CDS 45.0%
TTCCTCATGTGTCGAAATCG+AGG + chr7.3:43163761-43163780 None:intergenic 45.0%
TTCTTTGCGCGGAAACTTGA+AGG - chr7.3:43164068-43164087 MS.gene96865:CDS 45.0%
! ACAGGCTTTTGCGAAAACCA+CGG - chr7.3:43165664-43165683 MS.gene96865:CDS 45.0%
! ACTATCGGTTAAGGACGAGA+AGG - chr7.3:43164365-43164384 MS.gene96865:CDS 45.0%
! AGACAGCACTCAAACGCTTT+TGG - chr7.3:43164774-43164793 MS.gene96865:CDS 45.0%
! GAAGAAGGTGTGTAATCAGG+TGG + chr7.3:43163730-43163749 None:intergenic 45.0%
! TAGCTTGTGAAGGTTGTGAG+AGG - chr7.3:43165579-43165598 MS.gene96865:CDS 45.0%
! TATATTTGCCGATGGCCTTG+AGG - chr7.3:43164821-43164840 MS.gene96865:CDS 45.0%
!! CACTCAAACGCTTTTGGAGA+TGG - chr7.3:43164780-43164799 MS.gene96865:CDS 45.0%
!! GCAGTTTCAAAAGGGTGTTG+AGG - chr7.3:43164248-43164267 MS.gene96865:CDS 45.0%
!! GTTTCAAAAGGGTGTTGAGG+AGG - chr7.3:43164251-43164270 MS.gene96865:CDS 45.0%
AACCACGGTAGAAAGAGCAG+TGG - chr7.3:43165679-43165698 MS.gene96865:CDS 50.0%
AAGGTTGTGAGAGGGTAGAG+AGG - chr7.3:43165588-43165607 MS.gene96865:CDS 50.0%
AAGTACCCGGTTTCGCCATT+AGG - chr7.3:43163934-43163953 MS.gene96865:CDS 50.0%
ACATGAGGAACCTTCTCCTG+AGG - chr7.3:43163771-43163790 MS.gene96865:CDS 50.0%
AGTACCCGGTTTCGCCATTA+GGG - chr7.3:43163935-43163954 MS.gene96865:CDS 50.0%
ATGTCTACTTCTCCTCCGTG+TGG + chr7.3:43164435-43164454 None:intergenic 50.0%
CTTGAGTTCCTCAAGCTGGA+TGG + chr7.3:43165252-43165271 None:intergenic 50.0%
GACCTCGATTTCGACACATG+AGG - chr7.3:43163756-43163775 MS.gene96865:CDS 50.0%
GGTTTCCCTAATGGCGAAAC+CGG + chr7.3:43163943-43163962 None:intergenic 50.0%
GTTTCCCTAATGGCGAAACC+GGG + chr7.3:43163942-43163961 None:intergenic 50.0%
TAGAGAGGCCAGAGACATAC+AGG - chr7.3:43165603-43165622 MS.gene96865:CDS 50.0%
TCTTTGTGCACAAGCTGTGG+CGG - chr7.3:43164710-43164729 MS.gene96865:CDS 50.0%
TGCCATTGCCTGTATGTCTC+TGG + chr7.3:43165614-43165633 None:intergenic 50.0%
TGGAGATGGAAATCAGCGGT+TGG - chr7.3:43164794-43164813 MS.gene96865:CDS 50.0%
TTCTCCGGACAGTGATCTAC+AGG - chr7.3:43164191-43164210 MS.gene96865:CDS 50.0%
! AAGTACTGTGGAAGGGACTC+TGG - chr7.3:43164167-43164186 MS.gene96865:CDS 50.0%
! TAGAGCCGGGTTTTTGCAAC+AGG - chr7.3:43165646-43165665 MS.gene96865:CDS 50.0%
!! AAGGGAAGGAAGCATCCACA+CGG - chr7.3:43164417-43164436 MS.gene96865:CDS 50.0%
!! TATAGAAACCGGTTCGCGCT+TGG - chr7.3:43165163-43165182 MS.gene96865:CDS 50.0%
ACCTTGCAGCTTGCCCTTTC+CGG - chr7.3:43164934-43164953 MS.gene96865:CDS 55.0%
ACGACTAGTAGGAAAGGGCG+AGG - chr7.3:43164636-43164655 MS.gene96865:CDS 55.0%
ATCCTTTCCCAATCCTCGCG+AGG + chr7.3:43165515-43165534 None:intergenic 55.0%
ATGGGACACCATCCAGCTTG+AGG - chr7.3:43165241-43165260 MS.gene96865:CDS 55.0%
CAAACGTGCCTCAAGGCCAT+CGG + chr7.3:43164832-43164851 None:intergenic 55.0%
CCTGTGATCCGAAGTTTCGG+CGG + chr7.3:43165101-43165120 None:intergenic 55.0%
CTCCACTGCTCTTTCTACCG+TGG + chr7.3:43165684-43165703 None:intergenic 55.0%
CTGTGGTAGTCGACAGTCCA+AGG - chr7.3:43165336-43165355 MS.gene96865:CDS 55.0%
GGAAGGGACTCTGGATTCTC+CGG - chr7.3:43164176-43164195 MS.gene96865:CDS 55.0%
GGCCAGAGACATACAGGCAA+TGG - chr7.3:43165609-43165628 MS.gene96865:CDS 55.0%
GTGTGGATGCTTCCTTCCCT+TGG + chr7.3:43164418-43164437 None:intergenic 55.0%
TACCAGCCAAACGTGCCTCA+AGG + chr7.3:43164839-43164858 None:intergenic 55.0%
TATCGTGCCTCGCGAGGATT+GGG - chr7.3:43165505-43165524 MS.gene96865:CDS 55.0%
!! TGAAAGTATCGTGCCTCGCG+AGG - chr7.3:43165499-43165518 MS.gene96865:CDS 55.0%
ATACGCTGCCAAGCGCGAAC+CGG + chr7.3:43165174-43165193 None:intergenic 60.0%
CAGGAGGACCGCCGAAACTT+CGG - chr7.3:43165090-43165109 MS.gene96865:CDS 60.0%
CCGCCGAAACTTCGGATCAC+AGG - chr7.3:43165098-43165117 MS.gene96865:CDS 60.0%
CTCTCTGCAGGCCTGAAACC+AGG + chr7.3:43165140-43165159 None:intergenic 60.0%
GAGGCACGTTTGGCTGGTAC+AGG - chr7.3:43164840-43164859 MS.gene96865:CDS 60.0%
GCAGGCCTGAAACCAGGTTG+TGG + chr7.3:43165134-43165153 None:intergenic 60.0%
GTATCGTGCCTCGCGAGGAT+TGG - chr7.3:43165504-43165523 MS.gene96865:CDS 60.0%
TCCGGAAAGGGCAAGCTGCA+AGG + chr7.3:43164938-43164957 None:intergenic 60.0%
TGCCTCGCGAGGATTGGGAA+AGG - chr7.3:43165510-43165529 MS.gene96865:CDS 60.0%
! CGATGGCCTTGAGGCACGTT+TGG - chr7.3:43164830-43164849 MS.gene96865:CDS 60.0%
! GCATTTTACGGCTCGTCGCG+AGG - chr7.3:43164560-43164579 MS.gene96865:CDS 60.0%
!! GGAAGGAAGCATCCACACGG+AGG - chr7.3:43164420-43164439 MS.gene96865:CDS 60.0%
CGAAGTTTCGGCGGTCCTCC+TGG + chr7.3:43165092-43165111 None:intergenic 65.0%
GGCCTTGAGGCACGTTTGGC+TGG - chr7.3:43164834-43164853 MS.gene96865:CDS 65.0%


Chromosome Type Strat End Strand Name
chr7.3 gene 43163586 43165817 43163586 ID=MS.gene96865
chr7.3 mRNA 43163586 43165817 43163586 ID=MS.gene96865.t1;Parent=MS.gene96865
chr7.3 exon 43163586 43165817 43163586 ID=MS.gene96865.t1.exon1;Parent=MS.gene96865.t1
chr7.3 CDS 43163586 43165817 43163586 ID=cds.MS.gene96865.t1;Parent=MS.gene96865.t1
Gene Sequence

>MS.gene96865

ATGATGGATCAAAATCTTAAAGGGTATTTTGGTTCAACAAATGAGATCCAGTTGAGGAATCAATCTTTGCCTGTTCTTCAGAATCAAAGATTTGAAAATGGTTTCTTTGATCAAAGTATAGAATTTGGTTCTAATATGATACCACCTGATTACACACCTTCTTCAACAACGACCTCGATTTCGACACATGAGGAACCTTCTCCTGAGGAGTGTGAATTTTCTGATGCTGTTTTGAGTTACATCAATAACATCCTTATGGAAGAAGATATGGAAGATAAAACATGTATGCTTCAAGATTCTTTAGATCTTCAAATTGCTGAGAAATCATTTTACGAAGTTATAGGCAAAAAGTACCCGGTTTCGCCATTAGGGAAACCTCAAAGTCTTAGTAGTGAAACTGATGGTGTTGGAGATAATTACTTTTTTGATAATTATGGTACTTGTGTTGATGATGGTGACCTTAGTAGCATTTTTACCAACAATTCTTTGCGCGGAAACTTGAAGGAAGCTCAATTTCCTCATAATGGTTTTCAAGGAAATAGCATTGCACAATCATCTTATAGCTCGACAAATAGTGTAAGAAGTACTGTGGAAGGGACTCTGGATTCTCCGGACAGTGATCTACAGGTTTCTGATCAGAATAGTGAGAGTCAACCAATTTTGCAGTTTCAAAAGGGTGTTGAGGAGGCTAATAAGTTTCTCCCTAATGGAAATGGCCTCTTTCAAAATTTTGATGTTGCTAAGTATTCGATGCTAGAGCCTAGAGTGATGAAAGATGAACTATCGGTTAAGGACGAGAAGGATGAGAGGGATTCTTTTCTTTTTGGATCCAAGGGAAGGAAGCATCCACACGGAGGAGAAGTAGACATAGAAGAAAATAGAAGCAGCAAGCAAGCAGCGATTTACTCAGAACCTTTGTTGCGTTCAACTATGATGGATACGTTCCTGCTTCATAGTTTAGGAGATGCTAAGACGCATTTTACGGCTCGTCGCGAGGCGTTACAAGTAAAAACAAAGATTATAACATTGCCAAGTAATACATCGAAAGCTACGACTAGTAGGAAAGGGCGAGGTAAAAAACAAAACGGGAAAAAGGAAGTGATTGATTTGAGAACACTGCTTGTTCTTTGTGCACAAGCTGTGGCGGCAGACGACCATAAAAGTGCACATGAGTTGCTAAAGCAGATCAGACAGCACTCAAACGCTTTTGGAGATGGAAATCAGCGGTTGGCTCATATATTTGCCGATGGCCTTGAGGCACGTTTGGCTGGTACAGGAAGCCAAATTTATAAAGGACTAATCAGTAAAAGAACATCTGCTGCTGACTTTCTGAAAGCTTATCATCTATACCTTGCAGCTTGCCCTTTCCGGAAGATGACTAGTTTTGTCTCGAATGTCACTATATTTAAATCTGCCGCAAGTTCAATGAGGGTCCATGTTATAGACTTTGGTATCCTCTATGGTTTCCAATGGCCTACTTTCATACAAAGACTTTCATTACGACCAGGAGGACCGCCGAAACTTCGGATCACAGGAATAGACTTTCCACAACCTGGTTTCAGGCCTGCAGAGAGAATTATAGAAACCGGTTCGCGCTTGGCAGCGTATGCTGAATCTTTTAATGTGCCATTTGAGTATAATGCCATAGCAAAAAAATGGGACACCATCCAGCTTGAGGAACTCAAGATTGAAAAAGATGAATTCCTAGTTGTTACCTGTTTTTACCGTGGTAGAAACTTGCTGGATGAATCTGTGGTAGTCGACAGTCCAAGGAATAAAATCCTCAGTTTGATAAGAAGGATCAAACCGAATATATTCATTCACGGTATTGTTAATGGAGCCTTTAATGCTCCTTTCTTTGTTACTCGATTTAGGGAGGCGTTGTTTCACTTCTCTTCACTTTTCGATATGCTTGAAAGTATCGTGCCTCGCGAGGATTGGGAAAGGATGCTAATTGAAAAAGAGATATTTGGGAAGGAAGCATTGAATGTTATAGCTTGTGAAGGTTGTGAGAGGGTAGAGAGGCCAGAGACATACAGGCAATGGCAAATTCGTATTCTTAGAGCCGGGTTTTTGCAACAGGCTTTTGCGAAAACCACGGTAGAAAGAGCAGTGGAGAAAGTAAGGTCTAGCTACCACAAGGATTTTGTAATCGACGAAGATAGCAAGTGGTTATTACAAGGTTGGAAAGGGCGAATCGTTTACGCACTTTCTTGTTGGAAACCTGCTTGA
Protein sequence

>MS.gene96865.t1

MMDQNLKGYFGSTNEIQLRNQSLPVLQNQRFENGFFDQSIEFGSNMIPPDYTPSSTTTSISTHEEPSPEECEFSDAVLSYINNILMEEDMEDKTCMLQDSLDLQIAEKSFYEVIGKKYPVSPLGKPQSLSSETDGVGDNYFFDNYGTCVDDGDLSSIFTNNSLRGNLKEAQFPHNGFQGNSIAQSSYSSTNSVRSTVEGTLDSPDSDLQVSDQNSESQPILQFQKGVEEANKFLPNGNGLFQNFDVAKYSMLEPRVMKDELSVKDEKDERDSFLFGSKGRKHPHGGEVDIEENRSSKQAAIYSEPLLRSTMMDTFLLHSLGDAKTHFTARREALQVKTKIITLPSNTSKATTSRKGRGKKQNGKKEVIDLRTLLVLCAQAVAADDHKSAHELLKQIRQHSNAFGDGNQRLAHIFADGLEARLAGTGSQIYKGLISKRTSAADFLKAYHLYLAACPFRKMTSFVSNVTIFKSAASSMRVHVIDFGILYGFQWPTFIQRLSLRPGGPPKLRITGIDFPQPGFRPAERIIETGSRLAAYAESFNVPFEYNAIAKKWDTIQLEELKIEKDEFLVVTCFYRGRNLLDESVVVDSPRNKILSLIRRIKPNIFIHGIVNGAFNAPFFVTRFREALFHFSSLFDMLESIVPREDWERMLIEKEIFGKEALNVIACEGCERVERPETYRQWQIRILRAGFLQQAFAKTTVERAVEKVRSSYHKDFVIDEDSKWLLQGWKGRIVYALSCWKPA