AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene96951

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene96951.t1 MTR_7g098250 98.773 489 6 0 1 489 1 489 0.0 996
MS.gene96951.t1 MTR_1g080330 44.656 421 177 11 72 489 21 388 1.45e-95 294
MS.gene96951.t1 MTR_7g115530 52.381 315 124 8 128 437 97 390 1.84e-89 280
MS.gene96951.t1 MTR_1g080330 48.495 299 116 7 72 369 21 282 6.19e-79 248
MS.gene96951.t1 MTR_7g115530 54.065 246 92 5 128 369 97 325 6.29e-75 239
MS.gene96951.t1 MTR_7g115530 51.351 222 87 5 128 345 97 301 1.02e-60 201
MS.gene96951.t1 MTR_7g093030 53.125 160 74 1 257 416 207 365 6.26e-56 191
MS.gene96951.t1 MTR_1g053835 59.441 143 56 2 252 394 248 388 7.01e-55 189
MS.gene96951.t1 MTR_7g115530 48.636 220 92 5 128 343 97 299 5.92e-54 185
MS.gene96951.t1 MTR_2g027860 64.493 138 46 2 262 396 49 186 6.23e-52 179
MS.gene96951.t1 MTR_7g088070 56.129 155 63 2 241 395 33 182 2.91e-51 176
MS.gene96951.t1 MTR_7g088070 53.797 158 66 2 241 395 33 186 7.13e-50 172
MS.gene96951.t1 MTR_7g115530 47.692 195 81 5 128 318 97 274 2.35e-44 157
MS.gene96951.t1 MTR_6g032990 52.667 150 53 3 258 390 38 186 2.49e-44 160
MS.gene96951.t1 MTR_7g115530 46.970 198 83 6 128 321 97 276 3.93e-43 154
MS.gene96951.t1 MTR_2g086450 48.148 162 64 3 249 390 32 193 1.76e-39 147
MS.gene96951.t1 MTR_5g027440 50.355 141 58 2 262 390 25 165 7.25e-37 137
MS.gene96951.t1 MTR_5g041350 43.537 147 67 2 258 390 11 155 9.41e-37 139
MS.gene96951.t1 MTR_4g081710 46.575 146 63 3 258 390 13 156 4.52e-36 137
MS.gene96951.t1 MTR_2g027800 45.890 146 76 2 258 403 35 177 9.54e-35 132
MS.gene96951.t1 MTR_6g444980 47.407 135 62 2 262 390 35 166 8.85e-34 131
MS.gene96951.t1 MTR_1g053800 44.966 149 76 2 248 391 158 305 9.78e-34 130
MS.gene96951.t1 MTR_7g068600 50.355 141 55 4 253 384 4 138 9.93e-34 127
MS.gene96951.t1 MTR_6g444980 47.692 130 59 2 262 385 35 161 1.18e-32 127
MS.gene96951.t1 MTR_2g027800 41.615 161 75 3 258 403 35 191 1.59e-32 126
MS.gene96951.t1 MTR_1g090670 33.068 251 140 8 246 479 28 267 2.69e-31 122
MS.gene96951.t1 MTR_7g093030 57.303 89 37 1 257 345 207 294 5.58e-31 121
MS.gene96951.t1 MTR_1g053830 52.500 80 38 0 252 331 8 87 3.20e-26 102
MS.gene96951.t1 MTR_7g093010 38.125 160 93 2 229 387 185 339 8.34e-25 105
MS.gene96951.t1 MTR_1g087470 73.333 60 16 0 364 423 78 137 4.24e-21 90.1
MS.gene96951.t1 MTR_2g023580 48.352 91 46 1 251 341 44 133 5.28e-20 89.4
MS.gene96951.t1 MTR_0223s0040 67.857 56 18 0 263 318 19 74 1.59e-19 89.0
MS.gene96951.t1 MTR_1g112370 66.071 56 19 0 263 318 23 78 2.74e-19 89.4
MS.gene96951.t1 MTR_1g021520 62.121 66 25 0 263 328 127 192 7.12e-19 87.4
MS.gene96951.t1 MTR_2g084230 67.857 56 18 0 263 318 98 153 7.47e-19 87.8
MS.gene96951.t1 MTR_7g069660 64.286 56 20 0 263 318 72 127 9.17e-19 88.2
MS.gene96951.t1 MTR_2g084230 67.857 56 18 0 263 318 98 153 9.61e-19 88.2
MS.gene96951.t1 MTR_8g066310 52.439 82 37 1 250 329 161 242 1.23e-18 87.8
MS.gene96951.t1 MTR_8g086410 66.071 56 19 0 263 318 112 167 1.26e-18 88.6
MS.gene96951.t1 MTR_8g086410 66.071 56 19 0 263 318 110 165 1.27e-18 88.6
MS.gene96951.t1 MTR_8g086410 58.108 74 28 2 263 334 112 184 1.67e-18 88.2
MS.gene96951.t1 MTR_2g016220 67.857 56 18 0 263 318 90 145 1.87e-18 87.4
MS.gene96951.t1 MTR_2g016220 67.857 56 18 0 263 318 90 145 1.97e-18 87.4
MS.gene96951.t1 MTR_3g450310 56.140 57 25 0 262 318 19 75 2.77e-18 84.0
MS.gene96951.t1 MTR_5g019390 88.372 43 5 0 369 411 16 58 2.95e-18 79.3
MS.gene96951.t1 MTR_6g071625 57.534 73 29 1 263 333 203 275 4.13e-18 86.3
MS.gene96951.t1 MTR_3g064840 50.000 86 43 0 263 348 275 360 1.11e-17 85.9
MS.gene96951.t1 MTR_5g029470 61.905 63 24 0 256 318 213 275 1.92e-17 84.7
MS.gene96951.t1 MTR_2g016220 58.209 67 27 1 263 329 90 155 6.04e-17 82.8
MS.gene96951.t1 MTR_4g113140 47.727 88 44 1 253 338 226 313 1.00e-14 76.6
MS.gene96951.t1 MTR_1g090670 30.542 203 113 8 294 479 1 192 1.59e-14 73.2
MS.gene96951.t1 MTR_4g021790 50.000 70 34 1 262 331 168 236 3.60e-14 73.2
MS.gene96951.t1 MTR_2g450070 58.621 58 23 1 258 315 209 265 4.51e-14 75.1
MS.gene96951.t1 MTR_2g450070 58.621 58 23 1 258 315 209 265 4.86e-14 75.1
MS.gene96951.t1 MTR_4g086835 53.846 65 30 0 262 326 274 338 2.08e-13 72.4
MS.gene96951.t1 MTR_4g021855 40.594 101 51 3 253 345 159 258 3.23e-13 70.9
MS.gene96951.t1 MTR_5g054300 46.988 83 44 0 238 320 174 256 3.40e-13 71.2
MS.gene96951.t1 MTR_4g121020 44.792 96 44 3 258 345 107 201 6.25e-13 71.2
MS.gene96951.t1 MTR_1g093080 43.902 82 44 1 262 341 211 292 6.89e-13 70.5
MS.gene96951.t1 MTR_4g121020 44.792 96 44 3 258 345 211 305 7.26e-13 71.2
MS.gene96951.t1 MTR_4g121020 44.792 96 44 3 258 345 211 305 7.32e-13 71.2
MS.gene96951.t1 MTR_4g021760 44.565 92 48 3 253 342 160 250 1.02e-12 69.3
MS.gene96951.t1 MTR_1g032570 53.968 63 28 1 258 320 127 188 1.13e-12 70.5
MS.gene96951.t1 MTR_1g032570 53.968 63 28 1 258 320 196 257 1.28e-12 70.5
MS.gene96951.t1 MTR_3g106220 53.968 63 28 1 258 320 194 255 2.97e-12 69.3
MS.gene96951.t1 MTR_1g013170 51.471 68 32 1 258 325 187 253 3.04e-12 68.9
MS.gene96951.t1 MTR_5g017980 52.239 67 31 1 259 324 190 256 3.61e-12 67.8
MS.gene96951.t1 MTR_4g086835 53.030 66 30 1 262 327 274 338 3.67e-12 68.6
MS.gene96951.t1 MTR_4g064730 39.080 87 52 1 229 315 98 183 3.70e-12 67.8
MS.gene96951.t1 MTR_4g131600 45.570 79 41 2 258 336 197 273 4.88e-12 68.6
MS.gene96951.t1 MTR_4g131580 46.835 79 40 2 258 336 196 272 5.59e-12 68.6
MS.gene96951.t1 MTR_4g131570 51.562 64 30 1 258 321 199 261 8.85e-12 67.8
MS.gene96951.t1 MTR_4g098870 56.140 57 24 1 262 318 310 365 1.12e-11 67.4
MS.gene96951.t1 MTR_7g089010 55.556 54 23 1 262 315 91 143 1.13e-11 65.9
MS.gene96951.t1 MTR_4g098870 59.259 54 21 1 262 315 330 382 1.14e-11 67.4
MS.gene96951.t1 MTR_4g098870 59.259 54 21 1 262 315 330 382 1.24e-11 67.4
MS.gene96951.t1 MTR_4g098870 59.259 54 21 1 262 315 310 362 1.27e-11 67.4
MS.gene96951.t1 MTR_4g098870 59.259 54 21 1 262 315 349 401 1.31e-11 67.4
MS.gene96951.t1 MTR_5g014040 35.593 118 61 3 214 318 251 366 1.89e-11 66.6
MS.gene96951.t1 MTR_5g017980 52.239 67 30 2 259 324 190 255 6.17e-11 63.9
MS.gene96951.t1 MTR_5g017980 52.239 67 30 2 259 324 189 254 6.19e-11 63.9
MS.gene96951.t1 MTR_5g014040 34.167 120 64 3 214 320 251 368 8.24e-11 64.7
MS.gene96951.t1 MTR_5g014040 34.167 120 64 3 214 320 211 328 9.29e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene96951.t1 AT4G28610 47.439 449 167 18 1 440 1 389 7.70e-109 329
MS.gene96951.t1 AT5G29000 47.208 394 177 11 18 404 5 374 1.42e-94 293
MS.gene96951.t1 AT5G29000 50.145 345 142 10 67 404 10 331 1.21e-92 286
MS.gene96951.t1 AT5G29000 50.145 345 142 10 67 404 10 331 1.21e-92 286
MS.gene96951.t1 AT3G04450 49.851 335 144 11 67 393 14 332 4.18e-84 265
MS.gene96951.t1 AT3G04450 49.851 335 144 11 67 393 14 332 4.18e-84 265
MS.gene96951.t1 AT3G04450 49.851 335 144 11 67 393 54 372 1.69e-83 265
MS.gene96951.t1 AT2G20400 48.289 263 114 6 139 391 110 360 2.35e-61 206
MS.gene96951.t1 AT2G20400 48.106 264 114 7 139 391 110 361 1.36e-59 201
MS.gene96951.t1 AT5G29000 40.379 317 163 8 18 330 5 299 2.01e-54 185
MS.gene96951.t1 AT5G06800 56.173 162 70 1 232 393 162 322 2.13e-54 187
MS.gene96951.t1 AT2G01060 64.085 142 49 2 257 396 10 151 3.13e-53 181
MS.gene96951.t1 AT5G06800 54.491 167 70 2 232 393 162 327 4.04e-52 181
MS.gene96951.t1 AT3G13040 54.348 184 72 4 251 429 233 409 5.43e-50 177
MS.gene96951.t1 AT3G13040 54.348 184 72 4 251 429 233 409 5.43e-50 177
MS.gene96951.t1 AT3G13040 54.348 184 72 4 251 429 233 409 5.43e-50 177
MS.gene96951.t1 AT3G04450 42.182 275 134 11 67 332 54 312 3.73e-46 163
MS.gene96951.t1 AT3G24120 53.793 145 55 3 262 394 41 185 4.06e-44 157
MS.gene96951.t1 AT4G13640 53.103 145 56 2 262 394 37 181 2.72e-43 155
MS.gene96951.t1 AT3G24120 52.703 148 55 4 262 394 41 188 5.55e-42 152
MS.gene96951.t1 AT4G13640 52.027 148 56 3 262 394 37 184 3.07e-41 149
MS.gene96951.t1 AT3G04030 50.676 148 58 2 258 390 41 188 1.10e-40 150
MS.gene96951.t1 AT5G18240 44.000 200 83 5 240 415 26 220 4.52e-40 149
MS.gene96951.t1 AT5G18240 44.000 200 83 5 240 415 26 220 4.52e-40 149
MS.gene96951.t1 AT1G69580 47.799 159 62 3 251 390 23 179 1.43e-39 146
MS.gene96951.t1 AT1G69580 46.875 160 63 3 251 390 23 180 3.85e-39 145
MS.gene96951.t1 AT3G04030 50.000 148 58 3 258 390 41 187 3.76e-38 144
MS.gene96951.t1 AT1G79430 48.201 139 63 3 262 394 34 169 1.12e-37 142
MS.gene96951.t1 AT5G18240 43.500 200 82 6 240 415 26 218 6.24e-37 140
MS.gene96951.t1 AT3G04030 47.973 148 56 3 258 390 41 182 4.39e-35 135
MS.gene96951.t1 AT5G18240 42.000 200 81 6 240 415 26 214 2.52e-34 133
MS.gene96951.t1 AT5G18240 42.000 200 81 6 240 415 26 214 2.52e-34 133
MS.gene96951.t1 AT2G01060 63.725 102 35 2 297 396 1 102 4.08e-33 126
MS.gene96951.t1 AT5G45580 44.371 151 66 4 262 394 7 157 6.29e-33 126
MS.gene96951.t1 AT5G45580 44.371 151 66 4 262 394 23 173 9.72e-33 126
MS.gene96951.t1 AT3G12730 42.553 141 73 2 262 394 23 163 6.47e-31 120
MS.gene96951.t1 AT5G06800 53.125 96 45 0 232 327 162 257 1.83e-26 108
MS.gene96951.t1 AT3G04030 45.536 112 46 2 294 390 1 112 2.02e-20 92.4
MS.gene96951.t1 AT2G42660 59.091 66 27 0 263 328 51 116 2.24e-20 90.9
MS.gene96951.t1 AT1G79430 42.056 107 53 3 294 394 1 104 2.29e-20 91.7
MS.gene96951.t1 AT1G14600 69.643 56 17 0 263 318 24 79 7.08e-20 89.7
MS.gene96951.t1 AT5G42630 45.455 110 47 2 227 329 69 172 1.59e-19 87.8
MS.gene96951.t1 AT2G02060 71.698 53 15 0 263 315 30 82 3.44e-19 87.4
MS.gene96951.t1 AT2G02060 71.698 53 15 0 263 315 30 82 3.44e-19 87.4
MS.gene96951.t1 AT5G42630 45.455 110 47 2 227 329 69 172 3.67e-19 87.8
MS.gene96951.t1 AT1G32240 43.925 107 54 1 223 329 180 280 8.48e-19 88.2
MS.gene96951.t1 AT2G38300 55.714 70 31 0 263 332 55 124 8.79e-19 87.8
MS.gene96951.t1 AT4G17695 55.844 77 32 1 252 326 154 230 9.26e-19 87.8
MS.gene96951.t1 AT1G32240 43.925 107 54 1 223 329 180 280 1.18e-18 88.2
MS.gene96951.t1 AT5G16560 60.274 73 26 2 263 332 220 292 1.21e-18 88.2
MS.gene96951.t1 AT4G04605 69.811 53 16 0 263 315 15 67 1.24e-18 85.1
MS.gene96951.t1 AT2G40260 66.071 56 19 0 263 318 83 138 1.91e-18 87.8
MS.gene96951.t1 AT2G06020 54.386 57 26 0 262 318 86 142 1.37e-15 77.8
MS.gene96951.t1 AT3G04030 41.964 112 44 3 294 390 1 106 3.32e-15 77.0
MS.gene96951.t1 AT2G03500 52.778 72 34 0 253 324 224 295 5.25e-15 77.4
MS.gene96951.t1 AT4G04580 52.381 63 30 0 263 325 15 77 1.58e-14 72.0
MS.gene96951.t1 AT1G25550 60.000 60 24 0 262 321 209 268 2.95e-14 74.3
MS.gene96951.t1 AT5G18240 36.986 146 60 5 294 415 1 138 3.02e-14 73.9
MS.gene96951.t1 AT1G68670 52.941 68 32 0 262 329 215 282 2.00e-13 72.0
MS.gene96951.t1 AT3G12730 34.862 109 63 2 294 394 1 109 2.12e-13 68.9
MS.gene96951.t1 AT4G37180 51.351 74 35 1 243 315 190 263 2.84e-13 71.6
MS.gene96951.t1 AT4G37180 55.385 65 28 1 252 315 206 270 3.20e-13 71.6
MS.gene96951.t1 AT3G62670 56.452 62 23 1 258 315 207 268 4.58e-13 71.2
MS.gene96951.t1 AT5G59570 47.692 65 33 1 251 315 130 193 5.66e-13 70.1
MS.gene96951.t1 AT5G59570 47.692 65 33 1 251 315 130 193 5.66e-13 70.1
MS.gene96951.t1 AT3G16857 59.322 59 23 1 262 320 167 224 6.46e-13 71.6
MS.gene96951.t1 AT3G16857 59.322 59 23 1 262 320 237 294 7.92e-13 71.2
MS.gene96951.t1 AT3G16857 59.322 59 23 1 262 320 237 294 8.08e-13 71.2
MS.gene96951.t1 AT5G44190 50.769 65 31 1 254 318 139 202 1.11e-12 70.1
MS.gene96951.t1 AT5G44190 50.769 65 31 1 254 318 139 202 1.34e-12 69.3
MS.gene96951.t1 AT2G40970 45.455 77 37 2 244 320 91 162 1.98e-12 67.8
MS.gene96951.t1 AT1G49560 49.315 73 37 0 252 324 182 254 2.02e-12 68.9
MS.gene96951.t1 AT4G04555 51.786 56 27 0 263 318 15 70 3.16e-12 63.5
MS.gene96951.t1 AT5G05090 55.556 54 23 1 262 315 81 133 3.24e-12 67.4
MS.gene96951.t1 AT3G10760 55.556 54 23 1 262 315 105 157 3.35e-12 68.2
MS.gene96951.t1 AT3G46640 55.556 54 23 1 262 315 144 196 4.28e-12 67.8
MS.gene96951.t1 AT3G46640 55.556 54 23 1 262 315 144 196 4.28e-12 67.8
MS.gene96951.t1 AT3G46640 55.556 54 23 1 262 315 144 196 4.68e-12 67.4
MS.gene96951.t1 AT5G58080 59.259 54 21 1 262 315 194 246 6.59e-12 68.6
MS.gene96951.t1 AT3G25790 56.364 55 24 0 267 321 201 255 6.79e-12 67.4
MS.gene96951.t1 AT2G20570 53.125 64 29 1 255 318 146 208 1.58e-11 66.6
MS.gene96951.t1 AT1G25550 60.784 51 20 0 262 312 209 259 2.47e-11 64.7
MS.gene96951.t1 AT1G49190 45.205 73 34 2 262 328 215 287 3.77e-11 65.5
MS.gene96951.t1 AT4G37180 53.226 62 28 1 252 312 199 260 4.34e-11 63.9
MS.gene96951.t1 AT1G13300 49.206 63 32 0 262 324 181 243 5.47e-11 64.3

Find 121 sgRNAs with CRISPR-Local

Find 376 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTGTTCATGCAGCCGTTTC+TGG 0.141434 7.4:-12096349 None:intergenic
ACGATACTTTGACTTCTAAT+TGG 0.176459 7.4:+12093492 MS.gene96951:CDS
ATCTGGTGTTGAGCCATTTA+AGG 0.223957 7.4:+12098161 MS.gene96951:CDS
CTTAGAAGCTTGTTGAGATT+TGG 0.249037 7.4:-12098364 None:intergenic
TGACTTGCAATGGTCCATTT+TGG 0.253593 7.4:-12098268 None:intergenic
TTACCGTATTCTTCAAATAA+TGG 0.301607 7.4:+12093260 MS.gene96951:CDS
TCTGGGGTATGTCTCCTCTA+AGG 0.303816 7.4:-12093018 None:intergenic
CAAATCTCAACAAGCTTCTA+AGG 0.304177 7.4:+12098365 MS.gene96951:CDS
GCTGATGATGATGCCTTAAA+TGG 0.316466 7.4:-12098174 None:intergenic
CGGTTGCGAATCAGAAAATC+TGG 0.320603 7.4:-12093036 None:intergenic
CATCTGTCCTTTGACGCTTA+GGG 0.327736 7.4:-12098425 None:intergenic
TCATCTGTCCTTTGACGCTT+AGG 0.327888 7.4:-12098426 None:intergenic
CAACAACTTCCAGCTCTATC+TGG 0.330349 7.4:+12093717 MS.gene96951:CDS
TCATGTTAAAAGCCACTTAC+AGG 0.337959 7.4:+12094010 MS.gene96951:CDS
TGAATTGGAAGCATCCAAAA+TGG 0.350129 7.4:+12098254 MS.gene96951:CDS
CCCTATGTTATTCAGTTGTT+GGG 0.355160 7.4:-12092952 None:intergenic
GAGCGGTGCCTGCAATATTA+TGG 0.356005 7.4:+12093406 MS.gene96951:CDS
CTCGGTGGCCATAATATTGC+AGG 0.370683 7.4:-12093414 None:intergenic
TGTCCATCCAACACCCTTAG+AGG 0.370709 7.4:+12093004 MS.gene96951:CDS
TCCCTATGTTATTCAGTTGT+TGG 0.377389 7.4:-12092953 None:intergenic
TTGTGAAGATGACTTTGAAA+TGG 0.383554 7.4:-12093664 None:intergenic
ATGAGCTTCAGCACACCCTT+AGG 0.390446 7.4:-12093963 None:intergenic
TGAGCTTCACGAGGCATTTG+TGG 0.391511 7.4:+12093815 MS.gene96951:CDS
TGGAAGTTGTTGGTGACCTT+GGG 0.401493 7.4:-12093706 None:intergenic
AAAATGGACCATTGCAAGTC+AGG 0.405684 7.4:+12098270 MS.gene96951:CDS
CTGAATAACATAGGGATGTC+TGG 0.407302 7.4:+12092960 MS.gene96951:CDS
TAGAGACGAAATATCTTCAA+TGG 0.411601 7.4:-12094911 None:intergenic
TGCAGGCACCGCTCTCTACT+TGG 0.420513 7.4:-12093397 None:intergenic
ATTGCTTCTCAAACATCATC+TGG 0.427142 7.4:-12098134 None:intergenic
TTTGAGAAGCAATGCAAATC+TGG 0.429240 7.4:+12098144 MS.gene96951:CDS
CCAATGGAAACAGTGCTTCA+TGG 0.436394 7.4:+12093315 MS.gene96951:CDS
CAGATAGAGCTGGAAGTTGT+TGG 0.437915 7.4:-12093716 None:intergenic
TTTGGTAGGAGAGTCTTTCA+TGG 0.441273 7.4:-12098229 None:intergenic
GTCATTGAGTAACATGGCTT+CGG 0.445080 7.4:+12093232 MS.gene96951:CDS
TGAGCTTCAGCACACCCTTA+GGG 0.446411 7.4:-12093962 None:intergenic
AGTCCATCGCATTCGTGGCT+TGG 0.450820 7.4:-12093790 None:intergenic
GGTCCATTATTTGAAGAATA+CGG 0.453015 7.4:-12093263 None:intergenic
AGAAGCTTGTTGAGATTTGG+AGG 0.454821 7.4:-12098361 None:intergenic
AGAGACGAAATATCTTCAAT+GGG 0.455908 7.4:-12094910 None:intergenic
TTTGACGCTTAGGGGCTTGA+GGG 0.457431 7.4:-12098416 None:intergenic
GTTGTTGGTGACCTTGGGAT+TGG 0.458647 7.4:-12093701 None:intergenic
TGCGAATAGAAGAGCAAGGC+AGG 0.459388 7.4:+12098106 MS.gene96951:CDS
CTGGAAGTTGTTGGTGACCT+TGG 0.461134 7.4:-12093707 None:intergenic
CCATGAAGCACTGTTTCCAT+TGG 0.464624 7.4:-12093315 None:intergenic
TCAACAAAATGCAGAAATAC+AGG 0.466152 7.4:+12094098 MS.gene96951:intron
ACAAATGCCTCGTGAAGCTC+AGG 0.468546 7.4:-12093813 None:intergenic
TATCGTCATCACTGATTAGC+TGG 0.473545 7.4:-12093475 None:intergenic
TACTTGGTTATTATCAATTG+AGG 0.476017 7.4:-12093381 None:intergenic
GCAGAATTTGCTGAGGAAGA+TGG 0.480337 7.4:-12093762 None:intergenic
CTTTGACGCTTAGGGGCTTG+AGG 0.481559 7.4:-12098417 None:intergenic
TATGTCTCCTCTAAGGGTGT+TGG 0.482313 7.4:-12093011 None:intergenic
TGAAGATCGTTAGAATATCC+AGG 0.483197 7.4:-12093152 None:intergenic
TGATTCGCAACCGACTTATG+TGG 0.483864 7.4:+12093046 MS.gene96951:CDS
GTACTACCATTAGCTTGATC+AGG 0.485584 7.4:-12098294 None:intergenic
TTATTTGAAGAATACGGTAA+TGG 0.489486 7.4:-12093257 None:intergenic
TTCTAAGCGAAATGATTGGC+AGG 0.490400 7.4:+12093442 MS.gene96951:CDS
TCAGCCATTGAAAATCCATC+TGG 0.492315 7.4:+12098192 MS.gene96951:CDS
TAATGTGTTGATGTTGTAGA+AGG 0.498623 7.4:-12093290 None:intergenic
TCAGGAGTCCATCGCATTCG+TGG 0.504175 7.4:-12093795 None:intergenic
TCAGGACCTGATCAAGCTAA+TGG 0.505420 7.4:+12098288 MS.gene96951:CDS
AGAAATCAAGAAAACTAGGC+AGG 0.510355 7.4:-12093349 None:intergenic
GATCTTTCAATTGAGAAAGC+AGG 0.512244 7.4:-12092924 None:intergenic
GCTGGAAGCAGTTGAGAAGC+TGG 0.513069 7.4:+12098335 MS.gene96951:CDS
CTGAAGCTCATGAAAGTTGA+AGG 0.515183 7.4:+12093975 MS.gene96951:CDS
CACGGTTGAGGAAAGCTCGC+TGG 0.521650 7.4:+12098317 MS.gene96951:CDS
ATAAGTTCTAGTGGAGCAGT+TGG 0.527402 7.4:+12093110 MS.gene96951:CDS
TTCTACAGGAGCTACCCCTA+AGG 0.528407 7.4:+12093947 MS.gene96951:intron
TAATGGTAGTACCACGGTTG+AGG 0.529038 7.4:+12098305 MS.gene96951:CDS
AGCGAAATGATTGGCAGGAG+TGG 0.533310 7.4:+12093447 MS.gene96951:CDS
CTCAAGCCCCTAAGCGTCAA+AGG 0.535629 7.4:+12098418 MS.gene96951:CDS
TGCAGATGGAGGTCCAGAAA+CGG 0.542705 7.4:+12096336 MS.gene96951:CDS
ATCTGTCCTTTGACGCTTAG+GGG 0.544083 7.4:-12098424 None:intergenic
GCAGAGAAATCAAGAAAACT+AGG 0.544687 7.4:-12093353 None:intergenic
GATCAGGTCCTGACTTGCAA+TGG 0.546117 7.4:-12098278 None:intergenic
TATTCAAGATCTTGAGCCAA+AGG 0.548434 7.4:+12093535 MS.gene96951:CDS
GAAATCAAGAAAACTAGGCA+GGG 0.552022 7.4:-12093348 None:intergenic
TCAAGTCATATAAGTTCTAG+TGG 0.552138 7.4:+12093101 MS.gene96951:CDS
GCGAAATGATTGGCAGGAGT+GGG 0.552812 7.4:+12093448 MS.gene96951:CDS
CTGGGGTATGTCTCCTCTAA+GGG 0.553089 7.4:-12093017 None:intergenic
ACATCAACACATTATTCCAA+TGG 0.565212 7.4:+12093299 MS.gene96951:CDS
GCCCAACAACTGAATAACAT+AGG 0.567171 7.4:+12092951 MS.gene96951:CDS
TAAGTTCTAGTGGAGCAGTT+GGG 0.568512 7.4:+12093111 MS.gene96951:CDS
GGATGGACAGACAACGATGA+AGG 0.572042 7.4:-12092990 None:intergenic
CCCAACAACTGAATAACATA+GGG 0.575884 7.4:+12092952 MS.gene96951:CDS
AAATGGTACATACCTGTAAG+TGG 0.579249 7.4:-12094022 None:intergenic
TTCGCAGTCATTGAGTAACA+TGG 0.580455 7.4:+12093226 MS.gene96951:CDS
TATGTACCTTCAGATGACTC+TGG 0.581225 7.4:-12094136 None:intergenic
GGAAGCTCTACGACTGCAGA+TGG 0.586016 7.4:+12096322 MS.gene96951:CDS
ACGGCTGCATGAACAGCTTG+AGG 0.587387 7.4:+12096355 MS.gene96951:CDS
TCTCCTCTAAGGGTGTTGGA+TGG 0.587533 7.4:-12093007 None:intergenic
GGCTGTTGCAGAATTTGCTG+AGG 0.587897 7.4:-12093769 None:intergenic
GAAGATCGTTAGAATATCCA+GGG 0.589349 7.4:-12093151 None:intergenic
TGACAGTGGTATTGAGATCA+CGG 0.590168 7.4:+12096301 MS.gene96951:intron
GGTTGCGAATCAGAAAATCT+GGG 0.593485 7.4:-12093035 None:intergenic
TCTACAGGAGCTACCCCTAA+GGG 0.595403 7.4:+12093948 MS.gene96951:intron
AAATCAAGAAAACTAGGCAG+GGG 0.598415 7.4:-12093347 None:intergenic
GAGGCTGTCAATCAACTTGG+TGG 0.598508 7.4:+12093837 MS.gene96951:CDS
GTATTCTTCAAATAATGGAC+CGG 0.599927 7.4:+12093265 MS.gene96951:CDS
CAGCCAAGCCACGAATGCGA+TGG 0.603901 7.4:+12093787 MS.gene96951:CDS
AGGCTGTCAATCAACTTGGT+GGG 0.604087 7.4:+12093838 MS.gene96951:CDS
GCTTCACGAGGCATTTGTGG+AGG 0.611503 7.4:+12093818 MS.gene96951:CDS
GTGGAGGCTGTCAATCAACT+TGG 0.611778 7.4:+12093834 MS.gene96951:CDS
GAGCTTCAGCACACCCTTAG+GGG 0.611866 7.4:-12093961 None:intergenic
ATTTCGCTTAGAAAACTCCT+CGG 0.613155 7.4:-12093432 None:intergenic
GTTGATGTTGTAGAAGGTAC+CGG 0.613506 7.4:-12093284 None:intergenic
CTATCTGGAGAAAATCATGT+TGG 0.628306 7.4:+12093732 MS.gene96951:CDS
TCGGCAGGACACCAATCCCA+AGG 0.630813 7.4:+12093690 MS.gene96951:CDS
TATAGACCAGAGTCATCTGA+AGG 0.642332 7.4:+12094130 MS.gene96951:CDS
GTGTCAGAAGACACTCCAGA+TGG 0.648683 7.4:-12098207 None:intergenic
CAGCGAGCTTTCCTCAACCG+TGG 0.657234 7.4:-12098316 None:intergenic
GATAATAACCAAGTAGAGAG+CGG 0.662017 7.4:+12093389 MS.gene96951:CDS
ATGGACTCCTGAGCTTCACG+AGG 0.664112 7.4:+12093806 MS.gene96951:CDS
AGCTCTACGACTGCAGATGG+AGG 0.664727 7.4:+12096325 MS.gene96951:CDS
GCTTCTCAAACATCATCTGG+AGG 0.671425 7.4:-12098131 None:intergenic
TCGCTTAGAAAACTCCTCGG+TGG 0.696184 7.4:-12093429 None:intergenic
CAGTTGCGAATAGAAGAGCA+AGG 0.699827 7.4:+12098102 MS.gene96951:CDS
GTTGCGAATCAGAAAATCTG+GGG 0.701465 7.4:-12093034 None:intergenic
CTGCAATATTATGGCCACCG+AGG 0.705670 7.4:+12093415 MS.gene96951:CDS
GAGACGAAATATCTTCAATG+GGG 0.720068 7.4:-12094909 None:intergenic
TCAAGCTAATGGTAGTACCA+CGG 0.727330 7.4:+12098299 MS.gene96951:CDS
AAGATCGTTAGAATATCCAG+GGG 0.749204 7.4:-12093150 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAAAAAAAAAAAAAAAA+AGG - chr7.4:12097000-12097019 None:intergenic 0.0%
!! TAAAAAAAAAAAAAAAAAAA+GGG - chr7.4:12096999-12097018 None:intergenic 0.0%
!! AAAAAAAAAAAAAAAAAAGG+GGG - chr7.4:12096997-12097016 None:intergenic 10.0%
!!! TCGTTTTTTTTTTTTTTTAA+TGG + chr7.4:12096541-12096560 MS.gene96951:intron 10.0%
!!! TTGTTTTTTAATAAAAAAAC+GGG + chr7.4:12096819-12096838 MS.gene96951:intron 10.0%
!! AACAGATAAACAAAAAATTA+TGG + chr7.4:12095998-12096017 MS.gene96951:intron 15.0%
!! AATTTATTTAAGAAACATGT+TGG + chr7.4:12093610-12093629 MS.gene96951:intron 15.0%
!! ACAGATAAACAAAAAATTAT+GGG + chr7.4:12095999-12096018 MS.gene96951:intron 15.0%
!! ATTTATCATCTATAACTTAA+TGG + chr7.4:12096503-12096522 MS.gene96951:intron 15.0%
!! ATTTATTTAAGAAACATGTT+GGG + chr7.4:12093611-12093630 MS.gene96951:intron 15.0%
!! TATGTAAAAAAGAATTTGAA+TGG + chr7.4:12094389-12094408 MS.gene96951:intron 15.0%
!!! TAAGATTTTCTATTTTCTTT+CGG - chr7.4:12095664-12095683 None:intergenic 15.0%
!! AAAGGAAGTAGAATAATATT+CGG + chr7.4:12096787-12096806 MS.gene96951:intron 20.0%
!! AACAATACATAACAAAATAG+AGG - chr7.4:12094981-12095000 None:intergenic 20.0%
!! AACCAAAATATTGTATACAA+AGG - chr7.4:12094458-12094477 None:intergenic 20.0%
!! AAGCACATAAAAAATAATTG+AGG - chr7.4:12093925-12093944 None:intergenic 20.0%
!! AATCTAATCAATCAATCTAA+AGG + chr7.4:12095383-12095402 MS.gene96951:intron 20.0%
!! ACCAAAATATTGTATACAAA+GGG - chr7.4:12094457-12094476 None:intergenic 20.0%
!! ATCATGTAATTACACAAATA+AGG - chr7.4:12094840-12094859 None:intergenic 20.0%
!! ATGATATATGCATAATTACT+AGG - chr7.4:12095960-12095979 None:intergenic 20.0%
!! CTAATAAAAGATTAGACTAA+AGG - chr7.4:12094695-12094714 None:intergenic 20.0%
!! CTACATTTCAAACAATATTA+CGG - chr7.4:12097928-12097947 None:intergenic 20.0%
!! CTATAAAAGCAATAAATAAG+TGG + chr7.4:12096926-12096945 MS.gene96951:intron 20.0%
!! TATTTGAATATAAGCATTCA+AGG - chr7.4:12094071-12094090 None:intergenic 20.0%
!! TGTTAGTATGTTAATTGTTA+TGG + chr7.4:12096568-12096587 MS.gene96951:intron 20.0%
!! TTATGTATTGTTGTATTTCT+AGG + chr7.4:12094989-12095008 MS.gene96951:intron 20.0%
!! TTGACAAAATGTTATCTTTA+TGG - chr7.4:12097698-12097717 None:intergenic 20.0%
!!! AAATAAAATGTCACTTAATC+TGG + chr7.4:12097459-12097478 MS.gene96951:intron 20.0%
!!! AATAAAATGTCACTTAATCT+GGG + chr7.4:12097460-12097479 MS.gene96951:intron 20.0%
!!! CTATATTTGACTTCTTTAAA+GGG + chr7.4:12095094-12095113 MS.gene96951:intron 20.0%
!!! TATATTTGACTTCTTTAAAG+GGG + chr7.4:12095095-12095114 MS.gene96951:intron 20.0%
!!! TCTATATTTGACTTCTTTAA+AGG + chr7.4:12095093-12095112 MS.gene96951:intron 20.0%
!!! TGATAAATTTCTAAAAGTGA+TGG - chr7.4:12096491-12096510 None:intergenic 20.0%
!!! TTTTAGAAGTAGTAAGATTT+TGG - chr7.4:12097299-12097318 None:intergenic 20.0%
! AAAAGCAATAAATAAGTGGA+TGG + chr7.4:12096930-12096949 MS.gene96951:intron 25.0%
! AAAGAATTAAGACCTTACTT+TGG - chr7.4:12093893-12093912 None:intergenic 25.0%
! AAAGCAATAAATAAGTGGAT+GGG + chr7.4:12096931-12096950 MS.gene96951:intron 25.0%
! AAATACTTGTAGGATTTACT+CGG + chr7.4:12096693-12096712 MS.gene96951:intron 25.0%
! AAGTCTTAAATTGTTGTCTA+TGG + chr7.4:12094424-12094443 MS.gene96951:intron 25.0%
! AATGCACATTTCGTTTATTT+GGG + chr7.4:12097398-12097417 MS.gene96951:intron 25.0%
! AATTCTACAGTAAACTTTAC+AGG - chr7.4:12094257-12094276 None:intergenic 25.0%
! AATTGCCTTTATTAAGTAGA+TGG + chr7.4:12094273-12094292 MS.gene96951:intron 25.0%
! AGTGTGAATAAAATACTTGT+AGG + chr7.4:12096683-12096702 MS.gene96951:intron 25.0%
! ATATGCATGTGCATTTAAAA+CGG + chr7.4:12095187-12095206 MS.gene96951:intron 25.0%
! ATATTACTAGCTAGGATAAT+TGG - chr7.4:12095511-12095530 None:intergenic 25.0%
! CAAAAAAAAATGTCTTGAAG+AGG - chr7.4:12097795-12097814 None:intergenic 25.0%
! CATTAAAAAAGTTCACTGTT+AGG - chr7.4:12094744-12094763 None:intergenic 25.0%
! CTTTGAATCTAACACAAAAA+GGG - chr7.4:12098075-12098094 None:intergenic 25.0%
! GAAACTATATAGATAAAGTG+AGG - chr7.4:12097150-12097169 None:intergenic 25.0%
! GAACAGCATATAAAACATTT+AGG - chr7.4:12095343-12095362 None:intergenic 25.0%
! GGGAAAAAAGAAAATATTCA+AGG - chr7.4:12097831-12097850 None:intergenic 25.0%
! GGTAAAAATTTAATAGCCAA+TGG - chr7.4:12094236-12094255 None:intergenic 25.0%
! GTGAATAAATTCAACGAAAA+TGG + chr7.4:12096748-12096767 MS.gene96951:intron 25.0%
! TAAATTCCAAGTTTCTCATA+TGG - chr7.4:12094339-12094358 None:intergenic 25.0%
! TAATGCACATTTCGTTTATT+TGG + chr7.4:12097397-12097416 MS.gene96951:intron 25.0%
! TACTTGGTTATTATCAATTG+AGG - chr7.4:12093384-12093403 None:intergenic 25.0%
! TATCATCTGTTAATCTGATA+AGG + chr7.4:12095974-12095993 MS.gene96951:intron 25.0%
! TATTATTCTACTTCCTTTAC+AGG - chr7.4:12096785-12096804 None:intergenic 25.0%
! TCCATGTCTCTATTTATAAA+AGG + chr7.4:12095832-12095851 MS.gene96951:intron 25.0%
! TCTTTGAATCTAACACAAAA+AGG - chr7.4:12098076-12098095 None:intergenic 25.0%
! TGATTGATTAGATTAGATGT+TGG - chr7.4:12095377-12095396 None:intergenic 25.0%
! TGTATAATTGTAGATACTTG+TGG + chr7.4:12097566-12097585 MS.gene96951:intron 25.0%
! TGTCTATTACATAATAGAAC+TGG + chr7.4:12097053-12097072 MS.gene96951:intron 25.0%
! TTACCGTATTCTTCAAATAA+TGG + chr7.4:12093260-12093279 MS.gene96951:CDS 25.0%
! TTATTTGAAGAATACGGTAA+TGG - chr7.4:12093260-12093279 None:intergenic 25.0%
! TTTGAATCTAACACAAAAAG+GGG - chr7.4:12098074-12098093 None:intergenic 25.0%
!! AAAGTCATCTTCACAATTTT+CGG + chr7.4:12093671-12093690 MS.gene96951:CDS 25.0%
!! AGTATTTTATTCACACTAGT+TGG - chr7.4:12096680-12096699 None:intergenic 25.0%
!! ATATTTGACTTCTTTAAAGG+GGG + chr7.4:12095096-12095115 MS.gene96951:intron 25.0%
!! CAAATTTTTGCATATCAGTT+AGG + chr7.4:12094194-12094213 MS.gene96951:intron 25.0%
!! CAATTTCTTAGACAACATTT+TGG + chr7.4:12095025-12095044 MS.gene96951:intron 25.0%
!! CTTTTATTAGATTTGCGTAT+TGG + chr7.4:12094705-12094724 MS.gene96951:intron 25.0%
!! GGAAATCATTTTCTCAAAAA+TGG - chr7.4:12094544-12094563 None:intergenic 25.0%
!! GTATTTTATTCACACTAGTT+GGG - chr7.4:12096679-12096698 None:intergenic 25.0%
!! TATTTTATTCACACTAGTTG+GGG - chr7.4:12096678-12096697 None:intergenic 25.0%
!! TCATTCTCTTTTACAAATCA+AGG - chr7.4:12097767-12097786 None:intergenic 25.0%
!! TCCTTTTATAAATAGAGACA+TGG - chr7.4:12095836-12095855 None:intergenic 25.0%
!! TCTTTTACAAATCAAGGAAT+GGG - chr7.4:12097761-12097780 None:intergenic 25.0%
!! TTGTCAGATTTTCTGTTAAT+TGG + chr7.4:12094299-12094318 MS.gene96951:intron 25.0%
!!! ACCATTTATTTTCCAATGAA+CGG + chr7.4:12095229-12095248 MS.gene96951:intron 25.0%
!!! AGTGAACTTTTTTAATGAAC+GGG + chr7.4:12094747-12094766 MS.gene96951:intron 25.0%
!!! ATATTTGGTTTTCTTGTAGT+GGG + chr7.4:12095277-12095296 MS.gene96951:intron 25.0%
!!! ATTATGAAAGATACTGATTC+AGG + chr7.4:12095626-12095645 MS.gene96951:intron 25.0%
!!! CAGTGAACTTTTTTAATGAA+CGG + chr7.4:12094746-12094765 MS.gene96951:intron 25.0%
!!! CATTTTTGGATAAACTGATT+AGG + chr7.4:12097866-12097885 MS.gene96951:intron 25.0%
!!! TACAATTTGTTGAATACTGT+TGG + chr7.4:12094861-12094880 MS.gene96951:intron 25.0%
AAGAGCCATCTACTTAATAA+AGG - chr7.4:12094281-12094300 None:intergenic 30.0%
ACATCAACACATTATTCCAA+TGG + chr7.4:12093299-12093318 MS.gene96951:CDS 30.0%
ACCGTTCATTGGAAAATAAA+TGG - chr7.4:12095233-12095252 None:intergenic 30.0%
ACGCAGTAGTTAAAATTCAA+GGG - chr7.4:12094565-12094584 None:intergenic 30.0%
AGAGACGAAATATCTTCAAT+GGG - chr7.4:12094913-12094932 None:intergenic 30.0%
ATGCACATTTCGTTTATTTG+GGG + chr7.4:12097399-12097418 MS.gene96951:intron 30.0%
CAAAAATTTGTCCATGCAAA+AGG - chr7.4:12094184-12094203 None:intergenic 30.0%
CTAGAATGATATTACTAGCT+AGG - chr7.4:12095519-12095538 None:intergenic 30.0%
CTTTATGCATATGGCATTTA+GGG + chr7.4:12097948-12097967 MS.gene96951:intron 30.0%
GAGCATTACTCTATATTTCA+AGG - chr7.4:12094818-12094837 None:intergenic 30.0%
GAGTAAAATGCTAGAAAAGT+AGG + chr7.4:12096044-12096063 MS.gene96951:intron 30.0%
GGTCCATTATTTGAAGAATA+CGG - chr7.4:12093266-12093285 None:intergenic 30.0%
GGTTATGAGAATATGACATT+TGG - chr7.4:12097187-12097206 None:intergenic 30.0%
GTAATGAAAACCTTAACCTT+TGG - chr7.4:12093554-12093573 None:intergenic 30.0%
TAACTACTGCGTAATTAGTT+GGG + chr7.4:12094573-12094592 MS.gene96951:intron 30.0%
TACGCAGTAGTTAAAATTCA+AGG - chr7.4:12094566-12094585 None:intergenic 30.0%
TAGAGACGAAATATCTTCAA+TGG - chr7.4:12094914-12094933 None:intergenic 30.0%
TATGCATAATTACTAGGAAC+AGG - chr7.4:12095954-12095973 None:intergenic 30.0%
TCAACAAAATGCAGAAATAC+AGG + chr7.4:12094098-12094117 MS.gene96951:intron 30.0%
TTAACTACTGCGTAATTAGT+TGG + chr7.4:12094572-12094591 MS.gene96951:intron 30.0%
TTGAATCTAACACAAAAAGG+GGG - chr7.4:12098073-12098092 None:intergenic 30.0%
TTTCCATTCATCATTGATGT+CGG + chr7.4:12095450-12095469 MS.gene96951:intron 30.0%
! ACGATACTTTGACTTCTAAT+TGG + chr7.4:12093492-12093511 MS.gene96951:CDS 30.0%
! AGATCTTTTTCCACATAAGT+CGG - chr7.4:12093059-12093078 None:intergenic 30.0%
! AGGATTTGTTTGTTTCTTCT+TGG + chr7.4:12097886-12097905 MS.gene96951:intron 30.0%
! AGTGTTTTTCATTAGGTGAA+AGG - chr7.4:12093187-12093206 None:intergenic 30.0%
! AGTTTTCTAAGCGAAATGAT+TGG + chr7.4:12093438-12093457 MS.gene96951:CDS 30.0%
! ATTTTATTCACACTAGTTGG+GGG - chr7.4:12096677-12096696 None:intergenic 30.0%
! CTCTTTTACAAATCAAGGAA+TGG - chr7.4:12097762-12097781 None:intergenic 30.0%
! GAATATGACATTTGGTGAAA+AGG - chr7.4:12097179-12097198 None:intergenic 30.0%
! GCCCTTTGTATACAATATTT+TGG + chr7.4:12094453-12094472 MS.gene96951:intron 30.0%
! GGATTTGTTTGTTTCTTCTT+GGG + chr7.4:12097887-12097906 MS.gene96951:intron 30.0%
! GTATTATAATGCCTTTTGCA+TGG + chr7.4:12094170-12094189 MS.gene96951:intron 30.0%
! GTGTTTTTCATTAGGTGAAA+GGG - chr7.4:12093186-12093205 None:intergenic 30.0%
! TAATGTGTTGATGTTGTAGA+AGG - chr7.4:12093293-12093312 None:intergenic 30.0%
! TAGACATTGACTATGCATTT+AGG - chr7.4:12097039-12097058 None:intergenic 30.0%
! TATGTCTCTATGTAAGCTTT+TGG + chr7.4:12096171-12096190 MS.gene96951:intron 30.0%
! TATTTTCTTTTTTCCCCTTC+TGG + chr7.4:12097835-12097854 MS.gene96951:intron 30.0%
! TCAAGTCATATAAGTTCTAG+TGG + chr7.4:12093101-12093120 MS.gene96951:CDS 30.0%
! TTGTGAAGATGACTTTGAAA+TGG - chr7.4:12093667-12093686 None:intergenic 30.0%
! TTTTATGTGCTTCTTTCTAC+AGG + chr7.4:12093933-12093952 MS.gene96951:intron 30.0%
!! ACTCATTTTGTTTCTTTAGG+CGG + chr7.4:12093635-12093654 MS.gene96951:intron 30.0%
!! ATTATGGGTGTTTTCAAGAT+TGG + chr7.4:12096014-12096033 MS.gene96951:intron 30.0%
!! GAAATGTAGCTTTATGCATA+TGG + chr7.4:12097939-12097958 MS.gene96951:intron 30.0%
!! GGAACTCATTTTGTTTCTTT+AGG + chr7.4:12093632-12093651 MS.gene96951:intron 30.0%
!! GTATTCTTCAAATAATGGAC+CGG + chr7.4:12093265-12093284 MS.gene96951:CDS 30.0%
!! TGGACATTTTTAATTAGAGC+AGG - chr7.4:12095913-12095932 None:intergenic 30.0%
!!! CATATTTGGTTTTCTTGTAG+TGG + chr7.4:12095276-12095295 MS.gene96951:intron 30.0%
!!! CTTCTAGAGTGTTTTTCATT+AGG - chr7.4:12093194-12093213 None:intergenic 30.0%
!!! GGTCATTTGTTTTGTTTGAA+GGG + chr7.4:12095471-12095490 MS.gene96951:intron 30.0%
AAAAATGTCCTGATTCCAGA+AGG - chr7.4:12097853-12097872 None:intergenic 35.0%
AAAATGTCCTGATTCCAGAA+GGG - chr7.4:12097852-12097871 None:intergenic 35.0%
AAATCAAGAAAACTAGGCAG+GGG - chr7.4:12093350-12093369 None:intergenic 35.0%
AAATGGTACATACCTGTAAG+TGG - chr7.4:12094025-12094044 None:intergenic 35.0%
AAATGGTTTACCCTTACATG+AGG - chr7.4:12094527-12094546 None:intergenic 35.0%
AAGATCGTTAGAATATCCAG+GGG - chr7.4:12093153-12093172 None:intergenic 35.0%
ACACAGACATGAATAGTGAT+TGG + chr7.4:12096253-12096272 MS.gene96951:intron 35.0%
ACCATTTGCTTTATCTTCCA+AGG + chr7.4:12094038-12094057 MS.gene96951:intron 35.0%
AGAAATCAAGAAAACTAGGC+AGG - chr7.4:12093352-12093371 None:intergenic 35.0%
AGAACAAAAACGTCTTACAG+TGG + chr7.4:12095726-12095745 MS.gene96951:intron 35.0%
ATGTCCAACTAATTCCTAGT+TGG + chr7.4:12095926-12095945 MS.gene96951:intron 35.0%
ATTGCTTCTCAAACATCATC+TGG - chr7.4:12098137-12098156 None:intergenic 35.0%
ATTTCGCTTAGAAAACTCCT+CGG - chr7.4:12093435-12093454 None:intergenic 35.0%
CAAAACTCTTTGACTCTCTT+CGG - chr7.4:12094635-12094654 None:intergenic 35.0%
CAAATCTCAACAAGCTTCTA+AGG + chr7.4:12098365-12098384 MS.gene96951:CDS 35.0%
CAGCAGATGAGATAACTTTA+CGG - chr7.4:12095604-12095623 None:intergenic 35.0%
CATCAATAAAGTCTACAGCA+AGG + chr7.4:12096081-12096100 MS.gene96951:intron 35.0%
CCCAACAACTGAATAACATA+GGG + chr7.4:12092952-12092971 MS.gene96951:CDS 35.0%
CCCTATGTTATTCAGTTGTT+GGG - chr7.4:12092955-12092974 None:intergenic 35.0%
CTAAGTTATATGGATCAGGA+AGG + chr7.4:12096106-12096125 MS.gene96951:intron 35.0%
CTATCTGGAGAAAATCATGT+TGG + chr7.4:12093732-12093751 MS.gene96951:CDS 35.0%
CTCACATTAAGTGGTGTTTA+AGG + chr7.4:12096888-12096907 MS.gene96951:intron 35.0%
CTCTCCTACCAAAAATGAAT+TGG + chr7.4:12098239-12098258 MS.gene96951:CDS 35.0%
CTGTATCAGATCATGTGAAA+AGG - chr7.4:12098047-12098066 None:intergenic 35.0%
GAAATCAAGAAAACTAGGCA+GGG - chr7.4:12093351-12093370 None:intergenic 35.0%
GAAGATCGTTAGAATATCCA+GGG - chr7.4:12093154-12093173 None:intergenic 35.0%
GAGACATGGAATGTAAGAAA+AGG - chr7.4:12095822-12095841 None:intergenic 35.0%
GAGACGAAATATCTTCAATG+GGG - chr7.4:12094912-12094931 None:intergenic 35.0%
GATAATAACCAAGTAGAGAG+CGG + chr7.4:12093389-12093408 MS.gene96951:CDS 35.0%
GATCTTTCAATTGAGAAAGC+AGG - chr7.4:12092927-12092946 None:intergenic 35.0%
GCAAAGTTATAACCGTTCAT+TGG - chr7.4:12095244-12095263 None:intergenic 35.0%
GCAACAGTAGGTAACATATT+TGG + chr7.4:12095262-12095281 MS.gene96951:intron 35.0%
GCAGAGAAATCAAGAAAACT+AGG - chr7.4:12093356-12093375 None:intergenic 35.0%
GCTTTATGCATATGGCATTT+AGG + chr7.4:12097947-12097966 MS.gene96951:intron 35.0%
GGTTATAACTTTGCAACAGT+AGG + chr7.4:12095250-12095269 MS.gene96951:intron 35.0%
TATTCAAGATCTTGAGCCAA+AGG + chr7.4:12093535-12093554 MS.gene96951:CDS 35.0%
TCATGTTAAAAGCCACTTAC+AGG + chr7.4:12094010-12094029 MS.gene96951:CDS 35.0%
TCCCTATGTTATTCAGTTGT+TGG - chr7.4:12092956-12092975 None:intergenic 35.0%
TCCTTGGAAGATAAAGCAAA+TGG - chr7.4:12094042-12094061 None:intergenic 35.0%
TGAAGATCGTTAGAATATCC+AGG - chr7.4:12093155-12093174 None:intergenic 35.0%
TGAATCTAACACAAAAAGGG+GGG - chr7.4:12098072-12098091 None:intergenic 35.0%
TGCACATTTCGTTTATTTGG+GGG + chr7.4:12097400-12097419 MS.gene96951:intron 35.0%
TGTCCAACTAATTCCTAGTT+GGG + chr7.4:12095927-12095946 MS.gene96951:intron 35.0%
TTAGAACTCAATGATCAAGC+TGG - chr7.4:12097256-12097275 None:intergenic 35.0%
TTGCATATCAGTTAGGACAT+AGG + chr7.4:12094201-12094220 MS.gene96951:intron 35.0%
TTTGAGAAGCAATGCAAATC+TGG + chr7.4:12098144-12098163 MS.gene96951:CDS 35.0%
TTTGCTCCATATGAGAAACT+TGG + chr7.4:12094330-12094349 MS.gene96951:intron 35.0%
! AAAGGCATGACAACTATAAG+AGG - chr7.4:12098029-12098048 None:intergenic 35.0%
! ATTTGTTGAATACTGTTGGC+AGG + chr7.4:12094865-12094884 MS.gene96951:intron 35.0%
! CTTACAGTGGTATCTTTTCT+AGG + chr7.4:12095739-12095758 MS.gene96951:intron 35.0%
! CTTGCTGTAGACTTTATTGA+TGG - chr7.4:12096083-12096102 None:intergenic 35.0%
! GGATGCTTCCAATTCATTTT+TGG - chr7.4:12098250-12098269 None:intergenic 35.0%
! GTTGTTGTGTGTAAGCTTTT+TGG + chr7.4:12096211-12096230 MS.gene96951:intron 35.0%
! TTAGATGTTGGTAAAAGCTC+AGG - chr7.4:12095365-12095384 None:intergenic 35.0%
! TTTTATTCACACTAGTTGGG+GGG - chr7.4:12096676-12096695 None:intergenic 35.0%
! TTTTGTTCTTGACACAGTTC+AGG - chr7.4:12095775-12095794 None:intergenic 35.0%
!! CAGCAAGGTTCTAAGTTATA+TGG + chr7.4:12096096-12096115 MS.gene96951:intron 35.0%
!! CTTAGAAGCTTGTTGAGATT+TGG - chr7.4:12098367-12098386 None:intergenic 35.0%
!! GGTTCTAAGTTATATGGATC+AGG + chr7.4:12096102-12096121 MS.gene96951:intron 35.0%
!! TGAATTGGAAGCATCCAAAA+TGG + chr7.4:12098254-12098273 MS.gene96951:CDS 35.0%
!!! CGGTCATTTGTTTTGTTTGA+AGG + chr7.4:12095470-12095489 MS.gene96951:intron 35.0%
!!! GAGAATGTAGCTTTTGAAAC+TGG + chr7.4:12095411-12095430 MS.gene96951:intron 35.0%
!!! GCTTCCAATTCATTTTTGGT+AGG - chr7.4:12098246-12098265 None:intergenic 35.0%
!!! TTCTGGAATCAGGACATTTT+TGG + chr7.4:12097852-12097871 MS.gene96951:intron 35.0%
AAAATGGACCATTGCAAGTC+AGG + chr7.4:12098270-12098289 MS.gene96951:CDS 40.0%
AAATGTCCTGATTCCAGAAG+GGG - chr7.4:12097851-12097870 None:intergenic 40.0%
AACACCACTTAATGTGAGAC+AGG - chr7.4:12096886-12096905 None:intergenic 40.0%
AACCATTGCATCATTGACAG+TGG + chr7.4:12096287-12096306 MS.gene96951:intron 40.0%
ACAACAACCACAACAACCAA+GGG - chr7.4:12096199-12096218 None:intergenic 40.0%
ACACCACTTAATGTGAGACA+GGG - chr7.4:12096885-12096904 None:intergenic 40.0%
ACATAGGATGAGGAAACCAT+TGG + chr7.4:12094217-12094236 MS.gene96951:intron 40.0%
AGAGACGAGCGAATTTCAAT+TGG - chr7.4:12097638-12097657 None:intergenic 40.0%
AGATCTTGAGCCAAAGGTTA+AGG + chr7.4:12093541-12093560 MS.gene96951:intron 40.0%
ATCAGTTAGGACATAGGATG+AGG + chr7.4:12094207-12094226 MS.gene96951:intron 40.0%
ATCTTCCAACTCTGAATCAG+TGG + chr7.4:12095690-12095709 MS.gene96951:intron 40.0%
ATTCAGAGTTGGAAGATGGT+GGG - chr7.4:12095687-12095706 None:intergenic 40.0%
CGTAAAGTTATCTCATCTGC+TGG + chr7.4:12095602-12095621 MS.gene96951:intron 40.0%
CTAAAATAGCGAGCTTTGCT+GGG + chr7.4:12097313-12097332 MS.gene96951:intron 40.0%
CTCGGATTATCTACTTCAAC+TGG + chr7.4:12096711-12096730 MS.gene96951:intron 40.0%
CTCTTTCTCACTCCAAAGTA+AGG + chr7.4:12093878-12093897 MS.gene96951:intron 40.0%
CTGAAGCTCATGAAAGTTGA+AGG + chr7.4:12093975-12093994 MS.gene96951:CDS 40.0%
CTGAATAACATAGGGATGTC+TGG + chr7.4:12092960-12092979 MS.gene96951:CDS 40.0%
GCATTCAAGGAAACAATCCT+TGG - chr7.4:12094058-12094077 None:intergenic 40.0%
GCCCAACAACTGAATAACAT+AGG + chr7.4:12092951-12092970 MS.gene96951:CDS 40.0%
GGTTGCGAATCAGAAAATCT+GGG - chr7.4:12093038-12093057 None:intergenic 40.0%
GTCATTGAGTAACATGGCTT+CGG + chr7.4:12093232-12093251 MS.gene96951:CDS 40.0%
GTCCAACTAATTCCTAGTTG+GGG + chr7.4:12095928-12095947 MS.gene96951:intron 40.0%
GTCTAAACACAGTGTCTTAG+TGG + chr7.4:12096847-12096866 MS.gene96951:intron 40.0%
GTTGCGAATCAGAAAATCTG+GGG - chr7.4:12093037-12093056 None:intergenic 40.0%
TAAAATAGCGAGCTTTGCTG+GGG + chr7.4:12097314-12097333 MS.gene96951:intron 40.0%
TAAATTGCACCCCTCTTTAG+AGG + chr7.4:12095309-12095328 MS.gene96951:intron 40.0%
TACCACTGTCAATGATGCAA+TGG - chr7.4:12096292-12096311 None:intergenic 40.0%
TATAGACCAGAGTCATCTGA+AGG + chr7.4:12094130-12094149 MS.gene96951:CDS 40.0%
TATGTACCTTCAGATGACTC+TGG - chr7.4:12094139-12094158 None:intergenic 40.0%
TCAAGCTAATGGTAGTACCA+CGG + chr7.4:12098299-12098318 MS.gene96951:CDS 40.0%
TCAGCCATTGAAAATCCATC+TGG + chr7.4:12098192-12098211 MS.gene96951:CDS 40.0%
TCTTCCAACTCTGAATCAGT+GGG + chr7.4:12095691-12095710 MS.gene96951:intron 40.0%
TGACCGACATCAATGATGAA+TGG - chr7.4:12095456-12095475 None:intergenic 40.0%
TGAGTTAAGGGTTAAGGAGT+TGG - chr7.4:12096634-12096653 None:intergenic 40.0%
TGTTGTGTGTGTTAGTGACT+TGG - chr7.4:12095551-12095570 None:intergenic 40.0%
TTCGCAGTCATTGAGTAACA+TGG + chr7.4:12093226-12093245 MS.gene96951:CDS 40.0%
TTCTAAGCGAAATGATTGGC+AGG + chr7.4:12093442-12093461 MS.gene96951:CDS 40.0%
TTTGGTAGGAGAGTCTTTCA+TGG - chr7.4:12098232-12098251 None:intergenic 40.0%
! ACGGTTTGAGTTAAGGGTTA+AGG - chr7.4:12096640-12096659 None:intergenic 40.0%
! ACTGATTCAGAGTTGGAAGA+TGG - chr7.4:12095691-12095710 None:intergenic 40.0%
! AGCTCAAACGGTTTGAGTTA+AGG - chr7.4:12096647-12096666 None:intergenic 40.0%
! AGGAAATGACTCCTCTAAAG+AGG - chr7.4:12095323-12095342 None:intergenic 40.0%
! ATAAGTTCTAGTGGAGCAGT+TGG + chr7.4:12093110-12093129 MS.gene96951:CDS 40.0%
! ATCTGGTGTTGAGCCATTTA+AGG + chr7.4:12098161-12098180 MS.gene96951:CDS 40.0%
! CATATGTTTTCATCTTCCCC+TGG + chr7.4:12093134-12093153 MS.gene96951:CDS 40.0%
! CGAAGAGAGTCAAAGAGTTT+TGG + chr7.4:12094633-12094652 MS.gene96951:intron 40.0%
! GAAATGACTCCTCTAAAGAG+GGG - chr7.4:12095321-12095340 None:intergenic 40.0%
! GACGTTTTTGTTCTTGACCA+TGG - chr7.4:12095720-12095739 None:intergenic 40.0%
! GCTCAAACGGTTTGAGTTAA+GGG - chr7.4:12096646-12096665 None:intergenic 40.0%
! GCTGATGATGATGCCTTAAA+TGG - chr7.4:12098177-12098196 None:intergenic 40.0%
! GGAAATGACTCCTCTAAAGA+GGG - chr7.4:12095322-12095341 None:intergenic 40.0%
! GGAATGAAACTAGCCTGTAA+AGG + chr7.4:12096769-12096788 MS.gene96951:intron 40.0%
! GTACTACCATTAGCTTGATC+AGG - chr7.4:12098297-12098316 None:intergenic 40.0%
! GTTGATGTTGTAGAAGGTAC+CGG - chr7.4:12093287-12093306 None:intergenic 40.0%
! GTTTGTTTCTTCTTGGGTCA+TGG + chr7.4:12097893-12097912 MS.gene96951:intron 40.0%
! TAAGTTCTAGTGGAGCAGTT+GGG + chr7.4:12093111-12093130 MS.gene96951:CDS 40.0%
! TATCGTCATCACTGATTAGC+TGG - chr7.4:12093478-12093497 None:intergenic 40.0%
! TCATCTTCACAATTTTCGGC+AGG + chr7.4:12093675-12093694 MS.gene96951:CDS 40.0%
! TCTAAAATAGCGAGCTTTGC+TGG + chr7.4:12097312-12097331 MS.gene96951:intron 40.0%
! TGACAGTGGTATTGAGATCA+CGG + chr7.4:12096301-12096320 MS.gene96951:intron 40.0%
! TGATTTTCTCCAGATAGAGC+TGG - chr7.4:12093729-12093748 None:intergenic 40.0%
! TTTTGGATCCTCGTTTGAAC+AGG - chr7.4:12097282-12097301 None:intergenic 40.0%
!! AGAAGCTTGTTGAGATTTGG+AGG - chr7.4:12098364-12098383 None:intergenic 40.0%
!! CACTCCAGATGGATTTTCAA+TGG - chr7.4:12098199-12098218 None:intergenic 40.0%
!! CATTTTGTTTCTTTAGGCGG+TGG + chr7.4:12093638-12093657 MS.gene96951:intron 40.0%
!! TGACTTGCAATGGTCCATTT+TGG - chr7.4:12098271-12098290 None:intergenic 40.0%
!!! AGCTTTTGAAACTGGACATG+TGG + chr7.4:12095419-12095438 MS.gene96951:intron 40.0%
!!! GGATCAGGAAGGTACTTTTT+GGG + chr7.4:12096117-12096136 MS.gene96951:intron 40.0%
!!! TAGTTTTTTTCCTCCTTGCC+AGG + chr7.4:12096591-12096610 MS.gene96951:intron 40.0%
!!! TGGATCAGGAAGGTACTTTT+TGG + chr7.4:12096116-12096135 MS.gene96951:intron 40.0%
!!! TTTTTTCCCCTTCTGGAATC+AGG + chr7.4:12097842-12097861 MS.gene96951:intron 40.0%
AAAGTGAGGAGACTACGACT+TGG - chr7.4:12097136-12097155 None:intergenic 45.0%
AACACAGTGTCTTAGTGGCA+AGG + chr7.4:12096852-12096871 MS.gene96951:intron 45.0%
AAGTGAGGAGACTACGACTT+GGG - chr7.4:12097135-12097154 None:intergenic 45.0%
AGGCTGTCAATCAACTTGGT+GGG + chr7.4:12093838-12093857 MS.gene96951:CDS 45.0%
ATCTGTCCTTTGACGCTTAG+GGG - chr7.4:12098427-12098446 None:intergenic 45.0%
CAACAACCACAACAACCAAG+GGG - chr7.4:12096198-12096217 None:intergenic 45.0%
CAACAACTTCCAGCTCTATC+TGG + chr7.4:12093717-12093736 MS.gene96951:CDS 45.0%
CACAACAACCACAACAACCA+AGG - chr7.4:12096200-12096219 None:intergenic 45.0%
CAGATAGAGCTGGAAGTTGT+TGG - chr7.4:12093719-12093738 None:intergenic 45.0%
CAGTTGCGAATAGAAGAGCA+AGG + chr7.4:12098102-12098121 MS.gene96951:CDS 45.0%
CATCTGTCCTTTGACGCTTA+GGG - chr7.4:12098428-12098447 None:intergenic 45.0%
CCAATGGAAACAGTGCTTCA+TGG + chr7.4:12093315-12093334 MS.gene96951:CDS 45.0%
CCTTACATGAGGACAGTGAA+GGG - chr7.4:12094516-12094535 None:intergenic 45.0%
CCTTCACTGTCCTCATGTAA+GGG + chr7.4:12094514-12094533 MS.gene96951:intron 45.0%
CGGTTGCGAATCAGAAAATC+TGG - chr7.4:12093039-12093058 None:intergenic 45.0%
GACAGTGAAGGGACAAAGAA+AGG - chr7.4:12094505-12094524 None:intergenic 45.0%
GAGGAACAAGTGAAATGCCT+TGG - chr7.4:12098010-12098029 None:intergenic 45.0%
GATTCAGAGTTGGAAGATGG+TGG - chr7.4:12095688-12095707 None:intergenic 45.0%
GCTTCTCAAACATCATCTGG+AGG - chr7.4:12098134-12098153 None:intergenic 45.0%
GTTAAGGGTTAAGGAGTTGG+AGG - chr7.4:12096631-12096650 None:intergenic 45.0%
TAATGGTAGTACCACGGTTG+AGG + chr7.4:12098305-12098324 MS.gene96951:CDS 45.0%
TCACATGCATGAACTGTCCA+AGG + chr7.4:12097990-12098009 MS.gene96951:intron 45.0%
TCAGGACCTGATCAAGCTAA+TGG + chr7.4:12098288-12098307 MS.gene96951:CDS 45.0%
TCATCTGTCCTTTGACGCTT+AGG - chr7.4:12098429-12098448 None:intergenic 45.0%
TCTAACCTCCTGTTCAAACG+AGG + chr7.4:12097271-12097290 MS.gene96951:intron 45.0%
TCTGAATCAGTGGGTATCCA+TGG + chr7.4:12095700-12095719 MS.gene96951:intron 45.0%
! AAGGGGGAGATGCATTTTAG+AGG + chr7.4:12095112-12095131 MS.gene96951:intron 45.0%
! AGGGGGAGATGCATTTTAGA+GGG + chr7.4:12095113-12095132 MS.gene96951:intron 45.0%
! ATGTAAGCTTTTGGTCCCCT+TGG + chr7.4:12096180-12096199 MS.gene96951:intron 45.0%
! TATGTCTCCTCTAAGGGTGT+TGG - chr7.4:12093014-12093033 None:intergenic 45.0%
! TGATTCGCAACCGACTTATG+TGG + chr7.4:12093046-12093065 MS.gene96951:CDS 45.0%
!! CCATGAAGCACTGTTTCCAT+TGG - chr7.4:12093318-12093337 None:intergenic 45.0%
!! GATACCCACTGATTCAGAGT+TGG - chr7.4:12095698-12095717 None:intergenic 45.0%
!! GCAGAATTTGCTGAGGAAGA+TGG - chr7.4:12093765-12093784 None:intergenic 45.0%
!! TGGAAGTTGTTGGTGACCTT+GGG - chr7.4:12093709-12093728 None:intergenic 45.0%
!! AAAAAAAAAAAAAAAAAAAG+GGG - chr7.4:12096998-12097017 None:intergenic 5.0%
!!! TTTGTTTTTTAATAAAAAAA+CGG + chr7.4:12096818-12096837 MS.gene96951:intron 5.0%
ACAAATGCCTCGTGAAGCTC+AGG - chr7.4:12093816-12093835 None:intergenic 50.0%
AGCGAAATGATTGGCAGGAG+TGG + chr7.4:12093447-12093466 MS.gene96951:CDS 50.0%
AGTGAGGAGACTACGACTTG+GGG - chr7.4:12097134-12097153 None:intergenic 50.0%
ATGAGCTTCAGCACACCCTT+AGG - chr7.4:12093966-12093985 None:intergenic 50.0%
ATTCACACTAGTTGGGGGGT+TGG - chr7.4:12096672-12096691 None:intergenic 50.0%
CATCAGCTACCTTTGCTCTG+AGG - chr7.4:12097594-12097613 None:intergenic 50.0%
CCCTTACATGAGGACAGTGA+AGG - chr7.4:12094517-12094536 None:intergenic 50.0%
CCCTTCACTGTCCTCATGTA+AGG + chr7.4:12094513-12094532 MS.gene96951:intron 50.0%
CTCGGTGGCCATAATATTGC+AGG - chr7.4:12093417-12093436 None:intergenic 50.0%
CTGCAATATTATGGCCACCG+AGG + chr7.4:12093415-12093434 MS.gene96951:CDS 50.0%
CTGGGGTATGTCTCCTCTAA+GGG - chr7.4:12093020-12093039 None:intergenic 50.0%
CTTGTGGTACCTCAGAGCAA+AGG + chr7.4:12097582-12097601 MS.gene96951:intron 50.0%
GAGCGGTGCCTGCAATATTA+TGG + chr7.4:12093406-12093425 MS.gene96951:CDS 50.0%
GAGGCTGTCAATCAACTTGG+TGG + chr7.4:12093837-12093856 MS.gene96951:CDS 50.0%
GCGAAATGATTGGCAGGAGT+GGG + chr7.4:12093448-12093467 MS.gene96951:CDS 50.0%
GCTCCCTGTCTCACATTAAG+TGG + chr7.4:12096879-12096898 MS.gene96951:intron 50.0%
GGATGGACAGACAACGATGA+AGG - chr7.4:12092993-12093012 None:intergenic 50.0%
GGCCCCAACTAGGAATTAGT+TGG - chr7.4:12095933-12095952 None:intergenic 50.0%
GTGGAGGCTGTCAATCAACT+TGG + chr7.4:12093834-12093853 MS.gene96951:CDS 50.0%
GTGTCAGAAGACACTCCAGA+TGG - chr7.4:12098210-12098229 None:intergenic 50.0%
GTTAAGGAGTTGGAGGTCCA+GGG - chr7.4:12096624-12096643 None:intergenic 50.0%
TCGCTTAGAAAACTCCTCGG+TGG - chr7.4:12093432-12093451 None:intergenic 50.0%
TCTACAGGAGCTACCCCTAA+GGG + chr7.4:12093948-12093967 MS.gene96951:intron 50.0%
TGAATACTGTTGGCAGGAGC+TGG + chr7.4:12094871-12094890 MS.gene96951:intron 50.0%
TGAGCTTCAGCACACCCTTA+GGG - chr7.4:12093965-12093984 None:intergenic 50.0%
TGCAGATGGAGGTCCAGAAA+CGG + chr7.4:12096336-12096355 MS.gene96951:CDS 50.0%
TGCGAATAGAAGAGCAAGGC+AGG + chr7.4:12098106-12098125 MS.gene96951:CDS 50.0%
TGGATCCTCGTTTGAACAGG+AGG - chr7.4:12097279-12097298 None:intergenic 50.0%
TGTCCATCCAACACCCTTAG+AGG + chr7.4:12093004-12093023 MS.gene96951:CDS 50.0%
TTCACACTAGTTGGGGGGTT+GGG - chr7.4:12096671-12096690 None:intergenic 50.0%
TTCTACAGGAGCTACCCCTA+AGG + chr7.4:12093947-12093966 MS.gene96951:intron 50.0%
TTTGACGCTTAGGGGCTTGA+GGG - chr7.4:12098419-12098438 None:intergenic 50.0%
TTTGGTCCCCTTGGTTGTTG+TGG + chr7.4:12096189-12096208 MS.gene96951:intron 50.0%
! GATCAGGTCCTGACTTGCAA+TGG - chr7.4:12098281-12098300 None:intergenic 50.0%
! TCTGGGGTATGTCTCCTCTA+AGG - chr7.4:12093021-12093040 None:intergenic 50.0%
! TGAGCTTCACGAGGCATTTG+TGG + chr7.4:12093815-12093834 MS.gene96951:CDS 50.0%
!! CTGGAAGTTGTTGGTGACCT+TGG - chr7.4:12093710-12093729 None:intergenic 50.0%
!! GGCTGTTGCAGAATTTGCTG+AGG - chr7.4:12093772-12093791 None:intergenic 50.0%
!! GTTGTTGGTGACCTTGGGAT+TGG - chr7.4:12093704-12093723 None:intergenic 50.0%
!! TCTCCTCTAAGGGTGTTGGA+TGG - chr7.4:12093010-12093029 None:intergenic 50.0%
ACGGCTGCATGAACAGCTTG+AGG + chr7.4:12096355-12096374 MS.gene96951:CDS 55.0%
ACTAGGAACAGGCCCCAACT+AGG - chr7.4:12095943-12095962 None:intergenic 55.0%
AGCTCTACGACTGCAGATGG+AGG + chr7.4:12096325-12096344 MS.gene96951:CDS 55.0%
AGTCCATCGCATTCGTGGCT+TGG - chr7.4:12093793-12093812 None:intergenic 55.0%
ATGGACTCCTGAGCTTCACG+AGG + chr7.4:12093806-12093825 MS.gene96951:CDS 55.0%
CTCAAGCCCCTAAGCGTCAA+AGG + chr7.4:12098418-12098437 MS.gene96951:CDS 55.0%
CTTTGACGCTTAGGGGCTTG+AGG - chr7.4:12098420-12098439 None:intergenic 55.0%
GAGCTTCAGCACACCCTTAG+GGG - chr7.4:12093964-12093983 None:intergenic 55.0%
GCTGGAAGCAGTTGAGAAGC+TGG + chr7.4:12098335-12098354 MS.gene96951:CDS 55.0%
GCTGTTCATGCAGCCGTTTC+TGG - chr7.4:12096352-12096371 None:intergenic 55.0%
GGAAGCTCTACGACTGCAGA+TGG + chr7.4:12096322-12096341 MS.gene96951:CDS 55.0%
GGTTAAGGAGTTGGAGGTCC+AGG - chr7.4:12096625-12096644 None:intergenic 55.0%
TCAGGAGTCCATCGCATTCG+TGG - chr7.4:12093798-12093817 None:intergenic 55.0%
TCGCTCGTCTCTCTTTGCTC+TGG + chr7.4:12097646-12097665 MS.gene96951:intron 55.0%
! GCTTCACGAGGCATTTGTGG+AGG + chr7.4:12093818-12093837 MS.gene96951:CDS 55.0%
ACTTGGGGCTGGAGATGCTG+AGG - chr7.4:12097119-12097138 None:intergenic 60.0%
CACGGTTGAGGAAAGCTCGC+TGG + chr7.4:12098317-12098336 MS.gene96951:CDS 60.0%
CAGCCAAGCCACGAATGCGA+TGG + chr7.4:12093787-12093806 MS.gene96951:CDS 60.0%
CAGCGAGCTTTCCTCAACCG+TGG - chr7.4:12098319-12098338 None:intergenic 60.0%
CCAGGGTTCAAGTCCTGGCA+AGG - chr7.4:12096607-12096626 None:intergenic 60.0%
CCTTGCCAGGACTTGAACCC+TGG + chr7.4:12096604-12096623 MS.gene96951:intron 60.0%
GAGGTCCAGGGTTCAAGTCC+TGG - chr7.4:12096612-12096631 None:intergenic 60.0%
GGGGGGTTGGGTAGCTCAAA+CGG - chr7.4:12096659-12096678 None:intergenic 60.0%
GGGTTCAAGTCCTGGCAAGG+AGG - chr7.4:12096604-12096623 None:intergenic 60.0%
TCGGCAGGACACCAATCCCA+AGG + chr7.4:12093690-12093709 MS.gene96951:CDS 60.0%
! AGGAGACTACGACTTGGGGC+TGG - chr7.4:12097130-12097149 None:intergenic 60.0%
! TGCAGGCACCGCTCTCTACT+TGG - chr7.4:12093400-12093419 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr7.4 gene 12092912 12098452 12092912 ID=MS.gene96951
chr7.4 mRNA 12092912 12098452 12092912 ID=MS.gene96951.t1;Parent=MS.gene96951
chr7.4 exon 12092912 12093556 12092912 ID=MS.gene96951.t1.exon1;Parent=MS.gene96951.t1
chr7.4 CDS 12092912 12093556 12092912 ID=cds.MS.gene96951.t1;Parent=MS.gene96951.t1
chr7.4 exon 12093654 12093867 12093654 ID=MS.gene96951.t1.exon2;Parent=MS.gene96951.t1
chr7.4 CDS 12093654 12093867 12093654 ID=cds.MS.gene96951.t1;Parent=MS.gene96951.t1
chr7.4 exon 12093955 12094031 12093955 ID=MS.gene96951.t1.exon3;Parent=MS.gene96951.t1
chr7.4 CDS 12093955 12094031 12093955 ID=cds.MS.gene96951.t1;Parent=MS.gene96951.t1
chr7.4 exon 12094112 12094151 12094112 ID=MS.gene96951.t1.exon4;Parent=MS.gene96951.t1
chr7.4 CDS 12094112 12094151 12094112 ID=cds.MS.gene96951.t1;Parent=MS.gene96951.t1
chr7.4 exon 12094887 12094944 12094887 ID=MS.gene96951.t1.exon5;Parent=MS.gene96951.t1
chr7.4 CDS 12094887 12094944 12094887 ID=cds.MS.gene96951.t1;Parent=MS.gene96951.t1
chr7.4 exon 12096307 12096376 12096307 ID=MS.gene96951.t1.exon6;Parent=MS.gene96951.t1
chr7.4 CDS 12096307 12096376 12096307 ID=cds.MS.gene96951.t1;Parent=MS.gene96951.t1
chr7.4 exon 12098087 12098452 12098087 ID=MS.gene96951.t1.exon7;Parent=MS.gene96951.t1
chr7.4 CDS 12098087 12098452 12098087 ID=cds.MS.gene96951.t1;Parent=MS.gene96951.t1
Gene Sequence

>MS.gene96951

ATGGAAGCTCGTCCTGCTTTCTCAATTGAAAGATCAAGTGCCCAACAACTGAATAACATAGGGATGTCTGGAGCACTTCCTTCATCGTTGTCTGTCCATCCAACACCCTTAGAGGAGACATACCCCAGATTTTCTGATTCGCAACCGACTTATGTGGAAAAAGATCTTAAGACAAAAACTTTTAATCATTCAAGTCATATAAGTTCTAGTGGAGCAGTTGGGCATATGTTTTCATCTTCCCCTGGATATTCTAACGATCTTCATCACTCATCCCTTTCACCTAATGAAAAACACTCTAGAAGTGCTCATTTTATTTCGCAGTCATTGAGTAACATGGCTTCGGTGCCATTACCGTATTCTTCAAATAATGGACCGGTACCTTCTACAACATCAACACATTATTCCAATGGAAACAGTGCTTCATGGCATGCAGATCCCCTGCCTAGTTTTCTTGATTTCTCTGCAAATGCCTCAATTGATAATAACCAAGTAGAGAGCGGTGCCTGCAATATTATGGCCACCGAGGAGTTTTCTAAGCGAAATGATTGGCAGGAGTGGGCTGACCAGCTAATCAGTGATGACGATACTTTGACTTCTAATTGGAATGATCTTCTTGCTGATAATATTCAAGATCTTGAGCCAAAGGTTAAGGTTTTCATTACTCAAATCAGTATTAGCTTGCAGAGTAAATGAATAGCAATTTATTTAAGAAACATGTTGGGAACTCATTTTGTTTCTTTAGGCGGTGGAATCCATTTCAAAGTCATCTTCACAATTTTCGGCAGGACACCAATCCCAAGGTCACCAACAACTTCCAGCTCTATCTGGAGAAAATCATGTTGGTGTTGCTCCATCTTCCTCAGCAAATTCTGCAACAGCCAAGCCACGAATGCGATGGACTCCTGAGCTTCACGAGGCATTTGTGGAGGCTGTCAATCAACTTGGTGGGAGTGAAAGTATGTCTATCTCTTTCTCACTCCAAAGTAAGGTCTTAATTCTTTAAACGTCTGCCTCAATTATTTTTTATGTGCTTCTTTCTACAGGAGCTACCCCTAAGGGTGTGCTGAAGCTCATGAAAGTTGAAGGATTAACTATATATCATGTTAAAAGCCACTTACAGGTATGTACCATTTGCTTTATCTTCCAAGGATTGTTTCCTTGAATGCTTATATTCAAATATGTTGCTTCAACAAAATGCAGAAATACAGGACAGCTAGATATAGACCAGAGTCATCTGAAGGTACATAAGATATGCATTGTATTATAATGCCTTTTGCATGGACAAATTTTTGCATATCAGTTAGGACATAGGATGAGGAAACCATTGGCTATTAAATTTTTACCTGTAAAGTTTACTGTAGAATTGCCTTTATTAAGTAGATGGCTCTTGTCAGATTTTCTGTTAATTGGAAACTTACTTTGCTCCATATGAGAAACTTGGAATTTATGTCAAGTATGCTTTTCGAACATAAGAACATATGTAAAAAAGAATTTGAATGGCGCAAGTGTGTGAAGTCTTAAATTGTTGTCTATGGCTCTTAGCCCTTTGTATACAATATTTTGGTTATCTGTTTTCTTAAAACATTTTTTCCTTTCTTTGTCCCTTCACTGTCCTCATGTAAGGGTAAACCATTTTTGAGAAAATGATTTCCCTTGAATTTTAACTACTGCGTAATTAGTTGGGAAATTGCTAAATATAAATCATCTCTTTATATGAAATCCGAAGAGAGTCAAAGAGTTTTGGATTTTCAAATAATTAGTTAAGTATTAACTATAATTTCCTTTAGTCTAATCTTTTATTAGATTTGCGTATTGGAGATATTATGATACCTAACAGTGAACTTTTTTAATGAACGGGTTTTTGTGCATTTGATGTTTCTAAGTAGTGTGTCTTTATTATCTTCCTTGAAATATAGAGTAATGCTCCTTATTTGTGTAATTACATGATTTACAATTTGTTGAATACTGTTGGCAGGAGCTGGAGAGAAAAAACTAAGCCCCATTGAAGATATTTCGTCTCTAGATTTGAAAACGTAAGTGAACTATCGACTTTTATTTGATGCTAACCTCTATTTTGTTATGTATTGTTGTATTTCTAGGAATATTGATACATCAATTTCTTAGACAACATTTTGGTTCTCTAATATGACTTTGCTAATACAAATATTCAAATTTTAAATATCTATATTTGACTTCTTTAAAGGGGGAGATGCATTTTAGAGGGTAAAGTGCAGAGCGATAAATGTTGATTAGAAATAAGAGATTATGATAAAATATATGCATGTGCATTTAAAACGGTAAAGTTGTTAAAATCTAGACCATTTATTTTCCAATGAACGGTTATAACTTTGCAACAGTAGGTAACATATTTGGTTTTCTTGTAGTGGGTTAGATGTGTAAATTGCACCCCTCTTTAGAGGAGTCATTTCCTAAATGTTTTATATGCTGTTCCTGAGCTTTTACCAACATCTAATCTAATCAATCAATCTAAAGGTAAAAGAGAATGTAGCTTTTGAAACTGGACATGTGGACAGACGTTTTCCATTCATCATTGATGTCGGTCATTTGTTTTGTTTGAAGGGAAAAAGTTGCATGTCCAATTATCCTAGCTAGTAATATCATTCTAGAGATTGACACCAAGTCACTAACACACACAACACTGACATGTAAACTTGCATAGAAATTAGCGCCGTAAAGTTATCTCATCTGCTGGCATTATGAAAGATACTGATTCAGGTATCAAGACTAACCGAAAGAAAATAGAAAATCTTACCCACCATCTTCCAACTCTGAATCAGTGGGTATCCATGGTCAAGAACAAAAACGTCTTACAGTGGTATCTTTTCTAGGAATTCAAGAGCCTGAACTGTGTCAAGAACAAAAATATATCTAATAATCAACTAACTGCCTTTTCTTACATTCCATGTCTCTATTTATAAAAGGATGACTAGTAACTACTACAACGACTCTCAACTACTACAACGACTCTCTTGACAAGCCTGCTCTAATTAAAAATGTCCAACTAATTCCTAGTTGGGGCCTGTTCCTAGTAATTATGCATATATCATCTGTTAATCTGATAAGGTAACAGATAAACAAAAAATTATGGGTGTTTTCAAGATTGGATACTATGAGTAAAATGCTAGAAAAGTAGGATTTTAAGATAATCCATCAATAAAGTCTACAGCAAGGTTCTAAGTTATATGGATCAGGAAGGTACTTTTTGGGAGCAATGCATCAATGCAGATTAAATATTTTTTATGTCTCTATGTAAGCTTTTGGTCCCCTTGGTTGTTGTGGTTGTTGTGTGTAAGCTTTTTGGTCATATTTCATACACAGTAACACAGACATGAATAGTGATTGGTATACTGACTTAACCATTGCATCATTGACAGTGGTATTGAGATCACGGAAGCTCTACGACTGCAGATGGAGGTCCAGAAACGGCTGCATGAACAGCTTGAGGTTTGAATTTATTCTTTTTGTGAATTTTCTTCTGATATGCTCATTTGATTGTTAAAAGATTAGAAATGTGACTTGAAGACTTGTAAGCAAGCTCTATTTTTGTTGCAATTGCCATCACTTTTAGAAATTTATCATCTATAACTTAATGGAATTAGTGTGAATAATCGTTTTTTTTTTTTTTTAATGGCAAATGTTAGTATGTTAATTGTTATGGTAGTTTTTTTCCTCCTTGCCAGGACTTGAACCCTGGACCTCCAACTCCTTAACCCTTAACTCAAACCGTTTGAGCTACCCAACCCCCCAACTAGTGTGAATAAAATACTTGTAGGATTTACTCGGATTATCTACTTCAACTGGTGTTTCTGAGCTTAGTGAATAAATTCAACGAAAATGGAATGAAACTAGCCTGTAAAGGAAGTAGAATAATATTCGGTACTTCTGTTTGTTTTTTAATAAAAAAACGGGTAGTTGTCTAAACACAGTGTCTTAGTGGCAAGGTTATGCTCCCTGTCTCACATTAAGTGGTGTTTAAGGTTTTTTCAGAAGAATCTATAAAAGCAATAAATAAGTGGATGGGTGTAACAATTTTACTAAATCATCGTTATTAACTATTGTTGCCCCCTTTTTTTTTTTTTTTTTTTATCGTTATTAACTATTGTCCTAAATGCATAGTCAATGTCTATTACATAATAGAACTGGCTATTTTGCTTTTGCATTTTAACAAAATAATTTTGAATAGCCTCAGCATCTCCAGCCCCAAGTCGTAGTCTCCTCACTTTATCTATATAGTTTCTACAGTCCTTTTCACCAAATGTCATATTCTCATAACCATTTGCTTCAACAAGCAATGATCGAAAATTTCTGCTTACATTTATTCCAGCTTGATCATTGAGTTCTAACCTCCTGTTCAAACGAGGATCCAAAATCTTACTACTTCTAAAATAGCGAGCTTTGCTGGGGCTTATTAGATCATGATTATGCTCAAGAAATATTTTTGTAATAAGTATAATGATTTGAAAGTAATGCACATTTCGTTTATTTGGGGGAGTAACTAAAAAACTAAAAATTAAGTTTTATTGAAAAAATAAAATGTCACTTAATCTGGGAGCATCTTTACAGTTTAATATATGATAAGTTTAACATGCATTACAAAAATATGAACATCTTTGCAGTCATTAGATTAGTGTCATGTATAATTGTAGATACTTGTGGTACCTCAGAGCAAAGGTAGCTGATGTTGATTCTCTTTGTGCACTTACCAATTGAAATTCGCTCGTCTCTCTTTGCTCTGGAGTATGAATTAAAAATGAGATACTAACCATAAAGATAACATTTTGTCAAAAAAACATCATAAAGATAACATGTTAATTTGTAGTTGATGCCCATTCCTTGATTTGTAAAAGAGAATGATCTATCCTCTTCAAGACATTTTTTTTTGCAAAATATGTAAGCCTTGAATATTTTCTTTTTTCCCCTTCTGGAATCAGGACATTTTTGGATAAACTGATTAGGATTTGTTTGTTTCTTCTTGGGTCATGGAATTAACTTCCGTAATATTGTTTGAAATGTAGCTTTATGCATATGGCATTTAGGGTTATGTTGCTTCTGTCACGTCACATGCATGAACTGTCCAAGGCATTTCACTTGTTCCTCTTATAGTTGTCATGCCTTTTCACATGATCTGATACAGCTCCCCCCTTTTTGTGTTAGATTCAAAGAAATCTACAGTTGCGAATAGAAGAGCAAGGCAGGTACCTCCAGATGATGTTTGAGAAGCAATGCAAATCTGGTGTTGAGCCATTTAAGGCATCATCATCAGCCATTGAAAATCCATCTGGAGTGTCTTCTGACACCATGAAAGACTCTCCTACCAAAAATGAATTGGAAGCATCCAAAATGGACCATTGCAAGTCAGGACCTGATCAAGCTAATGGTAGTACCACGGTTGAGGAAAGCTCGCTGGAAGCAGTTGAGAAGCTGGATACCTCCAAATCTCAACAAGCTTCTAAGGATCTTGAGCAAAATGAAAATGAAGATAGCCCTCAAGCCCCTAAGCGTCAAAGGACAGATGAGTAA
Protein sequence

>MS.gene96951.t1

MEARPAFSIERSSAQQLNNIGMSGALPSSLSVHPTPLEETYPRFSDSQPTYVEKDLKTKTFNHSSHISSSGAVGHMFSSSPGYSNDLHHSSLSPNEKHSRSAHFISQSLSNMASVPLPYSSNNGPVPSTTSTHYSNGNSASWHADPLPSFLDFSANASIDNNQVESGACNIMATEEFSKRNDWQEWADQLISDDDTLTSNWNDLLADNIQDLEPKAVESISKSSSQFSAGHQSQGHQQLPALSGENHVGVAPSSSANSATAKPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRTARYRPESSEGAGEKKLSPIEDISSLDLKTGIEITEALRLQMEVQKRLHEQLEIQRNLQLRIEEQGRYLQMMFEKQCKSGVEPFKASSSAIENPSGVSSDTMKDSPTKNELEASKMDHCKSGPDQANGSTTVEESSLEAVEKLDTSKSQQASKDLEQNENEDSPQAPKRQRTDE