AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene96987

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene96987.t1 MTR_7g097090 98.625 291 4 0 1 291 1 291 0.0 602
MS.gene96987.t1 MTR_1g069805 76.792 293 48 8 1 291 1 275 4.49e-158 441
MS.gene96987.t1 MTR_2g064470 62.893 159 50 3 6 159 7 161 2.40e-69 217
MS.gene96987.t1 MTR_3g109340 43.426 251 124 5 9 246 21 266 8.42e-63 202
MS.gene96987.t1 MTR_3g109340 43.254 252 124 5 9 246 21 267 2.28e-62 201
MS.gene96987.t1 MTR_2g078700 56.250 160 64 1 8 161 21 180 1.80e-59 194
MS.gene96987.t1 MTR_1g008740 46.829 205 100 3 2 197 5 209 1.05e-58 191
MS.gene96987.t1 MTR_1g008740 46.829 205 100 3 2 197 19 223 1.19e-58 191
MS.gene96987.t1 MTR_4g108760 55.844 154 60 3 10 157 17 168 3.96e-57 187
MS.gene96987.t1 MTR_3g116070 39.016 305 139 9 10 279 23 315 1.44e-56 186
MS.gene96987.t1 MTR_6g084430 56.000 150 62 2 10 157 5 152 7.96e-56 183
MS.gene96987.t1 MTR_6g012670 47.236 199 81 5 10 196 20 206 9.45e-56 183
MS.gene96987.t1 MTR_5g021710 55.195 154 62 4 8 156 6 157 1.65e-55 183
MS.gene96987.t1 MTR_7g085260 42.593 270 113 9 10 240 17 283 1.93e-55 184
MS.gene96987.t1 MTR_3g435150 46.890 209 99 6 10 211 16 219 2.24e-55 181
MS.gene96987.t1 MTR_4g036030 43.379 219 110 5 8 216 5 219 1.64e-54 180
MS.gene96987.t1 MTR_3g070030 42.149 242 119 8 10 237 19 253 2.18e-54 180
MS.gene96987.t1 MTR_6g032770 53.503 157 67 2 10 160 18 174 4.35e-54 180
MS.gene96987.t1 MTR_4g101680 41.597 238 109 8 8 231 5 226 1.21e-53 179
MS.gene96987.t1 MTR_4g035590 48.649 185 77 4 8 176 6 188 2.43e-53 177
MS.gene96987.t1 MTR_8g076110 49.143 175 79 5 8 174 4 176 3.49e-53 176
MS.gene96987.t1 MTR_1g096430 42.373 236 121 6 5 228 2 234 4.90e-53 176
MS.gene96987.t1 MTR_5g012080 52.564 156 65 4 8 156 5 158 7.49e-53 176
MS.gene96987.t1 MTR_2g064090 50.588 170 75 3 9 171 5 172 2.09e-52 175
MS.gene96987.t1 MTR_6g477900 52.903 155 65 3 8 156 4 156 1.18e-51 170
MS.gene96987.t1 MTR_2g080010 50.307 163 66 2 10 157 15 177 1.96e-51 172
MS.gene96987.t1 MTR_7g085220 48.780 164 69 3 10 158 8 171 3.05e-51 172
MS.gene96987.t1 MTR_4g089135 46.369 179 69 2 10 161 15 193 5.80e-51 171
MS.gene96987.t1 MTR_3g064580 54.777 157 62 3 8 157 4 158 3.94e-50 176
MS.gene96987.t1 MTR_4g081870 44.886 176 86 4 8 175 7 179 4.92e-50 166
MS.gene96987.t1 MTR_8g094580 46.667 180 84 3 10 181 7 182 2.48e-49 165
MS.gene96987.t1 MTR_7g011130 38.372 258 122 7 13 237 22 275 3.46e-49 167
MS.gene96987.t1 MTR_2g062730 51.634 153 68 4 9 156 9 160 6.33e-49 166
MS.gene96987.t1 MTR_5g076850 55.769 156 61 4 8 157 4 157 7.07e-49 172
MS.gene96987.t1 MTR_3g096920 48.824 170 74 4 10 170 7 172 1.26e-48 164
MS.gene96987.t1 MTR_3g088110 49.091 165 74 2 10 167 7 168 1.33e-48 163
MS.gene96987.t1 MTR_7g005280 50.000 156 73 2 10 163 15 167 1.48e-48 162
MS.gene96987.t1 MTR_7g100990 35.739 291 137 7 10 276 11 275 2.85e-48 164
MS.gene96987.t1 MTR_2157s0010 47.531 162 71 3 10 157 8 169 3.53e-48 161
MS.gene96987.t1 MTR_5g014300 49.123 171 79 4 7 169 3 173 5.58e-48 163
MS.gene96987.t1 MTR_5g041940 46.452 155 73 2 10 156 3 155 6.34e-48 160
MS.gene96987.t1 MTR_2g093810 43.000 200 101 3 9 195 13 212 1.33e-47 162
MS.gene96987.t1 MTR_8g024480 34.050 279 152 6 8 263 13 282 1.52e-46 162
MS.gene96987.t1 MTR_2g079990 48.171 164 75 3 1 156 3 164 3.74e-46 159
MS.gene96987.t1 MTR_7g011120 45.614 171 76 3 13 170 11 177 2.56e-45 155
MS.gene96987.t1 MTR_8g059170 48.701 154 71 2 9 156 13 164 8.29e-45 155
MS.gene96987.t1 MTR_8g467490 40.828 169 87 1 2 157 6 174 1.15e-43 153
MS.gene96987.t1 MTR_3g096920 55.039 129 53 2 10 137 7 131 2.30e-43 151
MS.gene96987.t1 MTR_0036s0150 50.000 152 68 4 12 157 7 156 3.11e-43 155
MS.gene96987.t1 MTR_4g098630 48.148 162 73 4 7 159 3 162 2.19e-42 148
MS.gene96987.t1 MTR_2g079990 51.064 141 63 2 1 137 3 141 4.37e-42 149
MS.gene96987.t1 MTR_5g040420 41.772 158 80 1 12 157 16 173 5.08e-42 149
MS.gene96987.t1 MTR_1g090720 47.500 160 70 3 9 156 41 198 5.71e-42 150
MS.gene96987.t1 MTR_3g070040 37.657 239 124 8 14 237 12 240 1.10e-41 147
MS.gene96987.t1 MTR_6g011860 42.857 161 78 3 10 157 15 174 4.45e-41 146
MS.gene96987.t1 MTR_3g093040 41.270 189 101 4 9 189 107 293 1.08e-40 143
MS.gene96987.t1 MTR_1g090723 48.366 153 70 4 12 157 10 160 1.90e-40 149
MS.gene96987.t1 MTR_1g090723 50.000 152 68 5 12 157 10 159 2.00e-40 148
MS.gene96987.t1 MTR_1g090723 50.000 152 68 5 12 157 10 159 2.28e-40 148
MS.gene96987.t1 MTR_3g096140 45.695 151 74 3 12 156 9 157 1.09e-39 140
MS.gene96987.t1 MTR_4g134460 46.104 154 78 3 12 162 56 207 2.04e-39 143
MS.gene96987.t1 MTR_3g096140 45.695 151 74 3 12 156 9 157 4.99e-39 140
MS.gene96987.t1 MTR_5g069030 48.077 156 73 3 10 159 25 178 1.05e-38 144
MS.gene96987.t1 MTR_3g093050 46.497 157 76 3 9 159 21 175 2.28e-38 142
MS.gene96987.t1 MTR_3g093050 46.497 157 76 3 9 159 21 175 3.51e-38 142
MS.gene96987.t1 MTR_8g063550 43.137 153 79 3 10 156 6 156 1.92e-37 135
MS.gene96987.t1 MTR_8g063550 43.137 153 79 3 10 156 6 156 3.44e-37 137
MS.gene96987.t1 MTR_5g090970 40.881 159 80 2 12 156 20 178 7.20e-37 133
MS.gene96987.t1 MTR_8g063550 43.137 153 79 3 10 156 6 156 8.93e-37 136
MS.gene96987.t1 MTR_4g075980 42.953 149 79 3 12 157 17 162 1.45e-36 132
MS.gene96987.t1 MTR_1g097300 45.395 152 75 3 12 157 21 170 3.55e-36 136
MS.gene96987.t1 MTR_8g023840 46.259 147 74 4 10 153 11 155 4.00e-36 133
MS.gene96987.t1 MTR_5g090970 40.881 159 79 3 12 156 20 177 6.54e-35 128
MS.gene96987.t1 MTR_2g068880 42.331 163 76 4 12 156 24 186 8.24e-35 128
MS.gene96987.t1 MTR_2g068920 40.244 164 80 3 12 157 23 186 1.49e-34 127
MS.gene96987.t1 MTR_8g093580 41.176 153 82 3 10 156 6 156 1.84e-34 130
MS.gene96987.t1 MTR_2g086880 42.353 170 90 5 7 175 15 177 2.12e-34 130
MS.gene96987.t1 MTR_8g099750 41.290 155 80 3 8 153 12 164 2.47e-34 124
MS.gene96987.t1 MTR_2g086880 42.604 169 88 5 7 171 15 178 2.58e-34 131
MS.gene96987.t1 MTR_8g023860 43.537 147 78 4 10 153 12 156 2.55e-33 126
MS.gene96987.t1 MTR_3g098810 41.718 163 81 3 8 158 12 172 7.22e-33 121
MS.gene96987.t1 MTR_2g086690 41.401 157 78 5 11 154 5 160 2.29e-31 117
MS.gene96987.t1 MTR_4g094302 34.831 178 96 3 10 176 11 179 2.97e-31 115
MS.gene96987.t1 MTR_3g096140 43.066 137 70 3 26 156 2 136 5.46e-31 118
MS.gene96987.t1 MTR_8g023900 41.667 168 85 6 4 160 182 347 1.03e-30 120
MS.gene96987.t1 MTR_8g023900 37.634 186 108 5 6 184 8 192 2.48e-28 113
MS.gene96987.t1 MTR_3g098810 46.212 132 67 2 8 137 12 141 1.39e-30 113
MS.gene96987.t1 MTR_4g052620 38.365 159 81 5 10 154 5 160 2.65e-30 115
MS.gene96987.t1 MTR_8g023880 36.232 207 104 8 5 191 2 200 1.35e-29 113
MS.gene96987.t1 MTR_8g094580 44.697 132 61 3 58 181 1 128 3.16e-29 111
MS.gene96987.t1 MTR_4g094302 42.188 128 66 1 10 137 11 130 1.33e-28 107
MS.gene96987.t1 MTR_7g105170 35.366 164 90 5 10 158 4 166 2.85e-28 109
MS.gene96987.t1 MTR_8g023930 39.869 153 87 4 10 159 24 174 9.69e-28 112
MS.gene96987.t1 MTR_7g070140 53.750 80 37 0 65 144 19 98 2.00e-25 98.6
MS.gene96987.t1 MTR_8g093790 37.500 152 77 5 8 159 8 141 1.11e-21 90.1
MS.gene96987.t1 MTR_7g070150 50.725 69 33 1 101 168 1 69 7.51e-19 80.1
MS.gene96987.t1 MTR_3g096400 29.545 176 82 6 8 158 5 163 2.00e-16 76.6
MS.gene96987.t1 MTR_7g083330 30.968 155 86 6 7 158 15 151 2.20e-16 76.3
MS.gene96987.t1 MTR_7g083370 33.784 148 82 5 1 141 1 139 2.22e-16 74.7
MS.gene96987.t1 MTR_7g083360 29.932 147 97 4 1 145 1 143 6.52e-14 68.6
MS.gene96987.t1 MTR_2g014680 29.480 173 103 6 9 165 52 221 8.67e-13 67.8
MS.gene96987.t1 MTR_4g088245 28.977 176 106 6 9 168 67 239 1.53e-11 64.3
MS.gene96987.t1 MTR_5g053430 28.994 169 96 7 9 159 57 219 2.41e-11 64.3
MS.gene96987.t1 MTR_5g053430 28.994 169 96 7 9 159 57 219 2.53e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene96987.t1 AT4G28530 73.143 175 31 2 1 159 1 175 3.09e-93 280
MS.gene96987.t1 AT1G56010 47.009 234 100 5 6 231 15 232 1.20e-64 206
MS.gene96987.t1 AT3G12977 57.051 156 60 3 6 156 14 167 1.67e-61 196
MS.gene96987.t1 AT1G76420 56.688 157 65 1 9 162 21 177 2.58e-61 197
MS.gene96987.t1 AT2G24430 54.902 153 66 1 9 158 15 167 2.38e-60 194
MS.gene96987.t1 AT2G24430 54.902 153 66 1 9 158 15 167 2.38e-60 194
MS.gene96987.t1 AT4G28530 54.286 175 27 3 1 159 1 138 1.15e-58 190
MS.gene96987.t1 AT5G53950 55.844 154 62 1 10 157 17 170 3.58e-58 191
MS.gene96987.t1 AT3G18400 56.291 151 61 3 10 157 5 153 4.36e-58 189
MS.gene96987.t1 AT5G61430 57.143 154 58 3 10 157 16 167 4.49e-58 189
MS.gene96987.t1 AT5G07680 56.494 154 59 3 10 157 3 154 5.99e-58 188
MS.gene96987.t1 AT5G07680 56.494 154 59 3 10 157 17 168 9.16e-58 188
MS.gene96987.t1 AT4G36160 48.718 195 90 6 5 194 5 194 1.65e-56 186
MS.gene96987.t1 AT4G36160 48.718 195 90 6 5 194 5 194 1.65e-56 186
MS.gene96987.t1 AT4G36160 48.718 195 90 6 5 194 9 198 2.09e-56 186
MS.gene96987.t1 AT2G18060 46.875 192 92 5 8 194 7 193 1.14e-55 184
MS.gene96987.t1 AT2G18060 46.875 192 92 5 8 194 7 193 1.14e-55 184
MS.gene96987.t1 AT3G15170 50.617 162 74 1 10 165 20 181 2.22e-55 181
MS.gene96987.t1 AT5G39610 55.556 153 60 3 10 156 20 170 2.57e-55 181
MS.gene96987.t1 AT1G71930 41.975 243 111 6 6 243 5 222 4.47e-55 181
MS.gene96987.t1 AT1G71930 41.975 243 111 6 6 243 5 222 4.47e-55 181
MS.gene96987.t1 AT5G18270 55.556 153 61 3 10 156 21 172 1.38e-54 180
MS.gene96987.t1 AT5G18270 55.556 153 61 3 10 156 21 172 1.67e-54 180
MS.gene96987.t1 AT3G29035 48.936 188 74 4 10 191 24 195 3.05e-54 179
MS.gene96987.t1 AT1G12260 53.247 154 65 3 8 156 5 156 6.04e-54 179
MS.gene96987.t1 AT3G04060 54.902 153 62 3 10 156 20 171 7.20e-54 178
MS.gene96987.t1 AT1G12260 53.247 154 65 3 8 156 5 156 8.62e-54 180
MS.gene96987.t1 AT4G10350 46.535 202 82 6 8 185 7 206 8.75e-54 178
MS.gene96987.t1 AT5G66300 52.830 159 67 4 4 156 6 162 1.32e-53 176
MS.gene96987.t1 AT3G04070 47.368 171 76 2 1 157 1 171 3.66e-53 177
MS.gene96987.t1 AT1G33280 49.727 183 81 5 8 181 6 186 4.53e-53 176
MS.gene96987.t1 AT1G62700 52.597 154 66 3 8 156 5 156 1.30e-52 177
MS.gene96987.t1 AT1G62700 52.597 154 66 3 8 156 5 156 1.30e-52 177
MS.gene96987.t1 AT5G62380 52.147 163 71 4 8 165 5 165 1.64e-51 172
MS.gene96987.t1 AT5G62380 52.147 163 71 4 8 165 5 165 1.64e-51 172
MS.gene96987.t1 AT3G03200 53.846 156 63 3 8 156 4 157 2.45e-51 176
MS.gene96987.t1 AT3G17730 52.258 155 66 3 8 156 4 156 3.75e-51 169
MS.gene96987.t1 AT5G17260 52.564 156 65 3 8 156 4 157 6.75e-51 174
MS.gene96987.t1 AT3G04070 43.316 187 76 2 1 157 1 187 9.98e-51 171
MS.gene96987.t1 AT1G54330 55.629 151 62 3 9 156 5 153 5.03e-50 167
MS.gene96987.t1 AT3G15510 41.117 197 100 3 14 195 21 216 4.33e-49 167
MS.gene96987.t1 AT1G79580 51.974 152 68 3 9 156 16 166 1.07e-48 166
MS.gene96987.t1 AT1G79580 51.974 152 68 3 9 156 16 166 1.07e-48 166
MS.gene96987.t1 AT1G79580 51.974 152 68 3 9 156 16 166 1.07e-48 166
MS.gene96987.t1 AT1G79580 51.974 152 68 3 9 156 16 166 1.07e-48 166
MS.gene96987.t1 AT1G79580 51.974 152 68 3 9 156 16 166 1.07e-48 166
MS.gene96987.t1 AT1G61110 47.486 179 74 4 1 160 4 181 1.51e-48 164
MS.gene96987.t1 AT1G01720 43.590 195 97 3 10 196 7 196 2.89e-48 162
MS.gene96987.t1 AT1G65910 53.125 160 67 3 8 161 4 161 2.98e-48 170
MS.gene96987.t1 AT1G32770 45.181 166 72 3 8 156 14 177 5.78e-48 164
MS.gene96987.t1 AT5G08790 43.750 192 96 2 10 192 7 195 8.35e-48 161
MS.gene96987.t1 AT3G61910 41.463 205 96 4 8 190 9 211 4.32e-47 160
MS.gene96987.t1 AT1G69490 46.497 157 74 2 8 156 7 161 5.64e-47 159
MS.gene96987.t1 AT2G46770 44.379 169 72 3 8 156 14 180 5.99e-47 161
MS.gene96987.t1 AT1G52890 46.199 171 86 2 9 175 13 181 6.18e-47 160
MS.gene96987.t1 AT3G15500 48.780 164 74 3 1 156 1 162 1.05e-46 159
MS.gene96987.t1 AT4G27410 48.485 165 75 4 1 157 1 163 1.06e-46 159
MS.gene96987.t1 AT5G46590 41.784 213 109 5 8 213 4 208 1.76e-46 158
MS.gene96987.t1 AT5G63790 49.359 156 67 2 10 156 50 202 2.45e-46 158
MS.gene96987.t1 AT5G63790 49.359 156 67 2 10 156 60 212 2.98e-46 158
MS.gene96987.t1 AT3G10480 50.318 157 69 3 7 156 24 178 3.87e-46 161
MS.gene96987.t1 AT4G35580 45.050 202 101 4 9 202 8 207 4.21e-46 162
MS.gene96987.t1 AT4G35580 45.050 202 101 4 9 202 8 207 4.84e-46 162
MS.gene96987.t1 AT4G35580 45.050 202 101 4 9 202 8 207 5.23e-46 162
MS.gene96987.t1 AT3G10490 47.531 162 76 3 2 156 19 178 1.03e-45 154
MS.gene96987.t1 AT1G77450 48.428 159 70 3 7 156 5 160 1.11e-45 155
MS.gene96987.t1 AT5G04410 49.677 155 70 3 9 157 8 160 1.44e-45 162
MS.gene96987.t1 AT1G33060 43.842 203 105 4 9 205 23 222 3.95e-45 162
MS.gene96987.t1 AT1G33060 43.842 203 105 4 9 205 23 222 4.14e-45 162
MS.gene96987.t1 AT3G10480 51.282 156 68 4 7 156 24 177 5.43e-45 158
MS.gene96987.t1 AT3G10490 47.531 162 76 3 2 156 19 178 1.32e-44 157
MS.gene96987.t1 AT5G13180 35.484 248 138 4 10 253 14 243 3.69e-44 151
MS.gene96987.t1 AT3G10500 49.032 155 71 3 9 157 8 160 8.25e-44 157
MS.gene96987.t1 AT1G56010 46.961 181 73 4 58 231 1 165 1.63e-43 149
MS.gene96987.t1 AT5G39820 35.169 236 109 4 12 208 22 252 2.02e-43 151
MS.gene96987.t1 AT5G46590 40.385 208 108 4 8 213 4 197 2.89e-43 149
MS.gene96987.t1 AT4G27410 45.055 182 73 6 1 157 1 180 4.57e-43 150
MS.gene96987.t1 AT4G17980 48.428 159 70 3 8 156 4 160 5.58e-43 148
MS.gene96987.t1 AT4G17980 47.826 161 72 3 8 158 4 162 7.16e-43 149
MS.gene96987.t1 AT1G32510 46.667 165 76 3 6 158 2 166 1.00e-42 148
MS.gene96987.t1 AT2G33480 46.795 156 76 3 10 163 15 165 1.99e-41 144
MS.gene96987.t1 AT2G33480 46.203 158 76 3 10 163 15 167 4.32e-41 143
MS.gene96987.t1 AT2G02450 41.436 181 85 4 12 174 53 230 5.42e-41 146
MS.gene96987.t1 AT2G02450 41.436 181 85 4 12 174 53 230 9.65e-41 146
MS.gene96987.t1 AT1G26870 40.741 162 81 2 10 157 16 176 1.08e-40 146
MS.gene96987.t1 AT3G12977 60.748 107 35 3 55 156 10 114 1.93e-40 140
MS.gene96987.t1 AT2G43000 43.312 157 80 3 12 162 20 173 2.92e-40 141
MS.gene96987.t1 AT5G24590 47.742 155 74 3 8 156 11 164 4.50e-40 145
MS.gene96987.t1 AT3G10480 42.105 190 68 4 7 156 24 211 6.43e-40 146
MS.gene96987.t1 AT3G49530 44.231 156 80 3 9 158 12 166 4.97e-39 141
MS.gene96987.t1 AT3G49530 44.805 154 78 3 9 156 12 164 1.56e-38 141
MS.gene96987.t1 AT2G27300 46.259 147 73 3 8 153 12 153 1.59e-38 138
MS.gene96987.t1 AT1G52880 43.860 171 74 4 14 169 21 184 2.84e-38 137
MS.gene96987.t1 AT5G09330 44.444 153 77 3 10 156 6 156 1.05e-37 139
MS.gene96987.t1 AT5G09330 44.444 153 77 3 10 156 6 156 1.05e-37 139
MS.gene96987.t1 AT5G09330 44.444 153 77 3 10 156 6 156 1.05e-37 139
MS.gene96987.t1 AT5G09330 44.444 153 77 3 10 156 6 156 1.05e-37 139
MS.gene96987.t1 AT5G09330 44.444 153 77 3 10 156 6 156 1.05e-37 139
MS.gene96987.t1 AT2G17040 42.857 147 82 2 12 157 8 153 8.53e-37 132
MS.gene96987.t1 AT1G34180 41.401 157 84 3 7 157 13 167 9.02e-37 136
MS.gene96987.t1 AT5G61430 59.434 106 35 3 58 157 1 104 9.81e-37 132
MS.gene96987.t1 AT1G34180 42.105 152 80 3 12 157 18 167 3.68e-36 136
MS.gene96987.t1 AT4G10350 46.452 155 57 6 55 185 7 159 7.98e-36 130
MS.gene96987.t1 AT1G34190 42.105 152 80 3 12 157 18 167 1.39e-35 134
MS.gene96987.t1 AT1G34180 38.462 169 84 3 7 157 13 179 1.22e-34 130
MS.gene96987.t1 AT1G34180 39.024 164 80 3 12 157 18 179 5.05e-34 130
MS.gene96987.t1 AT3G12910 43.636 165 73 5 12 157 23 186 9.50e-34 125
MS.gene96987.t1 AT1G32870 44.937 158 75 4 8 157 8 161 1.75e-33 128
MS.gene96987.t1 AT1G32870 44.937 158 75 4 8 157 8 161 1.90e-33 128
MS.gene96987.t1 AT5G64060 39.869 153 84 3 10 156 6 156 2.81e-33 125
MS.gene96987.t1 AT1G32870 44.937 158 75 4 8 157 44 197 3.21e-33 128
MS.gene96987.t1 AT5G04395 42.384 151 73 2 1 137 19 169 3.81e-32 117
MS.gene96987.t1 AT5G22290 38.012 171 95 5 4 168 10 175 6.17e-32 121
MS.gene96987.t1 AT3G44290 40.559 143 79 3 12 153 16 153 1.52e-30 115
MS.gene96987.t1 AT3G44290 40.559 143 79 3 12 153 16 153 7.15e-30 115
MS.gene96987.t1 AT3G44350 35.648 216 116 8 6 205 1 209 1.39e-29 112
MS.gene96987.t1 AT4G01550 36.598 194 104 6 13 200 7 187 4.26e-29 115
MS.gene96987.t1 AT5G64530 32.418 182 91 4 10 171 3 172 3.06e-26 102
MS.gene96987.t1 AT3G44350 41.912 136 73 3 6 136 1 135 3.53e-26 101
MS.gene96987.t1 AT2G33480 48.077 104 48 2 64 163 9 110 1.03e-25 101
MS.gene96987.t1 AT4G01520 37.013 154 89 6 11 158 5 156 3.60e-24 99.8
MS.gene96987.t1 AT5G22380 37.013 154 84 5 13 154 8 160 4.45e-24 97.8
MS.gene96987.t1 AT4G01540 36.842 152 88 6 13 158 7 156 4.92e-23 98.2
MS.gene96987.t1 AT4G01540 36.842 152 88 6 13 158 7 156 4.98e-23 97.8
MS.gene96987.t1 AT4G01540 36.842 152 88 6 13 158 7 156 5.62e-23 98.2
MS.gene96987.t1 AT4G01540 36.842 152 88 6 13 158 7 156 5.74e-23 98.6
MS.gene96987.t1 AT1G02230 36.364 154 90 5 11 159 4 154 1.20e-22 96.7
MS.gene96987.t1 AT5G64530 36.719 128 69 2 10 137 3 118 1.68e-22 91.7
MS.gene96987.t1 AT2G18060 56.944 72 27 3 87 156 1 70 3.53e-22 94.0
MS.gene96987.t1 AT3G04420 33.333 150 93 4 11 156 4 150 5.10e-21 90.9
MS.gene96987.t1 AT3G04420 33.333 150 93 4 11 156 4 150 1.25e-20 90.5
MS.gene96987.t1 AT3G10490 53.165 79 30 2 83 156 2 78 8.26e-19 85.5
MS.gene96987.t1 AT3G10490 53.165 79 30 2 83 156 2 78 8.26e-19 85.5
MS.gene96987.t1 AT1G01010 33.750 160 91 6 13 161 6 161 2.62e-18 84.7
MS.gene96987.t1 AT2G43000 42.857 98 47 3 71 162 1 95 1.03e-17 79.7
MS.gene96987.t1 AT1G02250 32.432 148 92 4 11 153 4 148 2.49e-17 81.6
MS.gene96987.t1 AT5G50820 37.226 137 62 5 10 137 17 138 1.74e-16 76.3
MS.gene96987.t1 AT1G02220 31.008 129 80 4 11 135 4 127 3.28e-16 78.6
MS.gene96987.t1 AT3G04430 35.507 138 75 5 16 141 6 141 3.24e-15 73.2
MS.gene96987.t1 AT3G56530 27.815 151 102 4 9 154 51 199 2.45e-14 72.4
MS.gene96987.t1 AT5G14000 30.827 133 86 3 7 137 12 140 5.08e-13 65.9
MS.gene96987.t1 AT5G14000 25.581 172 121 4 7 175 12 179 2.05e-12 65.5
MS.gene96987.t1 AT1G28470 31.325 166 95 7 9 158 76 238 3.15e-12 66.2
MS.gene96987.t1 AT3G55210 26.994 163 103 4 6 154 7 167 3.33e-12 65.9
MS.gene96987.t1 AT5G22290 42.500 80 41 3 89 168 2 76 5.49e-12 64.7
MS.gene96987.t1 AT4G29230 29.319 191 101 10 10 172 47 231 3.39e-11 63.9
MS.gene96987.t1 AT4G29230 29.319 191 101 10 10 172 48 232 3.46e-11 63.9
MS.gene96987.t1 AT4G29230 29.016 193 103 10 8 172 46 232 5.77e-11 63.2

Find 70 sgRNAs with CRISPR-Local

Find 210 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTAACCGTGCTATTATTATT+TGG 0.209937 7.4:-12564245 None:intergenic
CTGAAGCCACACCATCTTCT+AGG 0.277699 7.4:-12564334 None:intergenic
CACAAATGAGGAAGTTCTTA+AGG 0.329369 7.4:+12560311 MS.gene96987:CDS
ACAAACAGAGCAACTATATC+TGG 0.343800 7.4:+12562881 MS.gene96987:CDS
ATGGTATTTCTTTAGCTTCC+GGG 0.345420 7.4:+12562832 MS.gene96987:CDS
GAGCAACTATATCTGGATAT+TGG 0.349161 7.4:+12562888 MS.gene96987:CDS
GCTCCAAATGGTATCAAAAC+AGG 0.356435 7.4:+12563001 MS.gene96987:CDS
TCATCATGGAAGAATTGTTT+TGG 0.356600 7.4:-12564193 None:intergenic
TGTGAACCATGGCAGCTTCC+AGG 0.356905 7.4:+12560363 MS.gene96987:CDS
ATTCTTGTGGAACATGGATT+TGG 0.363780 7.4:+12564301 MS.gene96987:CDS
TCTGGATATTGGAAAGCAAC+TGG 0.367759 7.4:+12562899 MS.gene96987:CDS
GAGATGATGACATCAAAGTT+AGG 0.374943 7.4:-12564082 None:intergenic
CCTACAACCTCTTGTGTGAT+TGG 0.380585 7.4:-12562944 None:intergenic
TTATCCAAGTGATGAGGAAT+TGG 0.381621 7.4:+12560263 MS.gene96987:CDS
GAATTGTTGTGTGTTGAGTT+TGG 0.385310 7.4:-12564036 None:intergenic
TCCAAAGGTGATGATGGATA+TGG 0.397088 7.4:+12564278 MS.gene96987:CDS
AATGGTATTTCTTTAGCTTC+CGG 0.397370 7.4:+12562831 MS.gene96987:CDS
TATAGCCACTAGGGATGGTT+TGG 0.417138 7.4:-12564115 None:intergenic
GGGATGGTTTGGTAATTTGT+TGG 0.418314 7.4:-12564104 None:intergenic
TAAATCCAGTTGCATATTTG+CGG 0.420581 7.4:-12562856 None:intergenic
TCCATATCCATCATCACCTT+TGG 0.424892 7.4:-12564279 None:intergenic
GAAAGACATTGGTGTTCTAT+AGG 0.425789 7.4:+12562972 MS.gene96987:CDS
CTTGGATGCAATAAGATTTG+AGG 0.438363 7.4:+12564358 MS.gene96987:CDS
CGGGACCGCAAATATGCAAC+TGG 0.444721 7.4:+12562851 MS.gene96987:CDS
TTTGTTGATCACAGGAGGAC+TGG 0.451819 7.4:+12563955 MS.gene96987:intron
CAGTTGCATATTTGCGGTCC+CGG 0.454823 7.4:-12562850 None:intergenic
CCAATCACACAAGAGGTTGT+AGG 0.461134 7.4:+12562944 MS.gene96987:CDS
ATTAGTTCCAAAGGTGATGA+TGG 0.463352 7.4:+12564272 MS.gene96987:CDS
CACACCAATTCCTCATCACT+TGG 0.483760 7.4:-12560267 None:intergenic
CTTGGATAAAATCGAAATCC+AGG 0.488698 7.4:-12560249 None:intergenic
TTGTTGATCACAGGAGGACT+GGG 0.497348 7.4:+12563956 MS.gene96987:intron
ACAAATGAGGAAGTTCTTAA+GGG 0.506795 7.4:+12560312 MS.gene96987:CDS
CTGTTTCACGAGAATATTGA+AGG 0.508957 7.4:-12564220 None:intergenic
AGATGATGACATCAAAGTTA+GGG 0.519573 7.4:-12564081 None:intergenic
CAATCACACAAGAGGTTGTA+GGG 0.525240 7.4:+12562945 MS.gene96987:CDS
ATAGGAGCTTCACTACCTCC+TGG 0.533290 7.4:+12560231 MS.gene96987:CDS
CTGGATATTGGAAAGCAACT+GGG 0.545781 7.4:+12562900 MS.gene96987:CDS
TAAATGATGAAGTGTTGTCA+TGG 0.547733 7.4:-12564162 None:intergenic
AGATGGTGTGGCTTCAGACT+TGG 0.547899 7.4:+12564340 MS.gene96987:CDS
TATATACCTGGAAGCTGCCA+TGG 0.548318 7.4:-12560369 None:intergenic
CAAGTTTGTTATAGCCACTA+GGG 0.549346 7.4:-12564124 None:intergenic
GAAGAAAATAGCCTAGAAGA+TGG 0.553895 7.4:+12564323 MS.gene96987:CDS
CAAAGCTTAATGCAAATGAA+TGG 0.555762 7.4:+12562813 MS.gene96987:CDS
ATATGGATTCTTGTGGAACA+TGG 0.561084 7.4:+12564295 MS.gene96987:CDS
AAATGATGAAGTGTTGTCAT+GGG 0.565391 7.4:-12564161 None:intergenic
GACACCACACATGCCTCCTA+AGG 0.568201 7.4:+12563051 MS.gene96987:CDS
TTTGTTATAGCCACTAGGGA+TGG 0.575379 7.4:-12564120 None:intergenic
GTTACTCAAATTAGTTCCAA+AGG 0.576717 7.4:+12564263 MS.gene96987:CDS
GTCATGGGTTTGAGAGACAT+AGG 0.581509 7.4:+12560213 None:intergenic
AGCAACTGGGAAAGATCGTA+TGG 0.583285 7.4:+12562913 MS.gene96987:CDS
TCAAGTTTGTTATAGCCACT+AGG 0.587656 7.4:-12564125 None:intergenic
TATAGGAATAGAGCTCCAAA+TGG 0.588028 7.4:+12562989 MS.gene96987:CDS
TGAGGTTGATAATGATAATG+TGG 0.588693 7.4:+12564376 MS.gene96987:CDS
TGTAGGGATGAGAAAGACAT+TGG 0.588790 7.4:+12562961 MS.gene96987:CDS
GATGACATCAAAGTTAGGGA+TGG 0.596756 7.4:-12564077 None:intergenic
CTCCAAATGGTATCAAAACA+GGG 0.600706 7.4:+12563002 MS.gene96987:CDS
GACATCAAAGTTAGGGATGG+AGG 0.613884 7.4:-12564074 None:intergenic
ATATTGAAGGAGATTCATCA+TGG 0.619903 7.4:-12564207 None:intergenic
CTCACCTTAGGAGGCATGTG+TGG 0.621337 7.4:-12563055 None:intergenic
AAATAGCCTAGAAGATGGTG+TGG 0.624894 7.4:+12564328 MS.gene96987:CDS
GCCATGGTTCACATATGTGA+AGG 0.625702 7.4:-12560353 None:intergenic
ATGATGGATATGGATTCTTG+TGG 0.648298 7.4:+12564288 MS.gene96987:CDS
AGATCCAAATAATAATAGCA+CGG 0.654615 7.4:+12564241 MS.gene96987:CDS
GTTAGATCCAATCACACAAG+AGG 0.657130 7.4:+12562937 MS.gene96987:CDS
AATGATGAAGTGTTGTCATG+GGG 0.659787 7.4:-12564160 None:intergenic
ATGATGAAGTGTTGTCATGG+GGG 0.660202 7.4:-12564159 None:intergenic
ACCTTCACATATGTGAACCA+TGG 0.672346 7.4:+12560352 MS.gene96987:CDS
AATTACCAAACCATCCCTAG+TGG 0.692848 7.4:+12564110 MS.gene96987:CDS
CAAATGGTATCAAAACAGGG+TGG 0.731036 7.4:+12563005 MS.gene96987:CDS
GGATAAAATCGAAATCCAGG+AGG 0.731687 7.4:-12560246 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATGTTAAAAAAAAAAATCTA+AGG + chr7.4:12563786-12563805 MS.gene96987:intron 10.0%
!! TGTTAAAAAAAAAAATCTAA+GGG + chr7.4:12563787-12563806 MS.gene96987:intron 10.0%
!! TTTCAAATAACAAAATTAAT+TGG + chr7.4:12561964-12561983 MS.gene96987:intron 10.0%
!!! AAATAGCTTTTTAATTTTTA+TGG - chr7.4:12562033-12562052 None:intergenic 10.0%
!!! AGAACTTATTTTATTTAATA+TGG - chr7.4:12563541-12563560 None:intergenic 10.0%
!!! ATCAAAAGTATAAAAATTAA+GGG + chr7.4:12563180-12563199 MS.gene96987:intron 10.0%
!!! TTTAAGATAGATAAAAAAAT+TGG + chr7.4:12561594-12561613 MS.gene96987:intron 10.0%
!!! TTTTATATGAAAAAAATACA+GGG - chr7.4:12561428-12561447 None:intergenic 10.0%
!!! TTTTTATATGAAAAAAATAC+AGG - chr7.4:12561429-12561448 None:intergenic 10.0%
!! AAAAAAAAAAAATTGAAGGA+AGG + chr7.4:12562001-12562020 MS.gene96987:intron 15.0%
!! CATTCAATAAATAAAGTAAT+AGG + chr7.4:12560895-12560914 MS.gene96987:intron 15.0%
!! TATGACAAATGAAAAATAAA+AGG + chr7.4:12563832-12563851 MS.gene96987:intron 15.0%
!! TTTATATGAAAAAAATACAG+GGG - chr7.4:12561427-12561446 None:intergenic 15.0%
!!! ATTGGATTTTTTTTTTTGAA+GGG - chr7.4:12561388-12561407 None:intergenic 15.0%
!!! CACATATATTTTTGTTAATT+AGG + chr7.4:12563925-12563944 MS.gene96987:intron 15.0%
!!! CATCAAAAGTATAAAAATTA+AGG + chr7.4:12563179-12563198 MS.gene96987:intron 15.0%
!!! TTAATAATTTGTTTGATTTC+TGG + chr7.4:12560492-12560511 MS.gene96987:intron 15.0%
!!! TTTGCTACTAATTTTTTTAA+AGG - chr7.4:12562462-12562481 None:intergenic 15.0%
!! AAGTAAAAATTCATTCGTAT+TGG + chr7.4:12563580-12563599 MS.gene96987:intron 20.0%
!! AATTATCTGAATTATCTTCA+TGG + chr7.4:12560448-12560467 MS.gene96987:intron 20.0%
!! AGAATACAAGAAAAATAGAA+AGG + chr7.4:12560824-12560843 MS.gene96987:intron 20.0%
!! CTAAGAATAATATTACTGTA+TGG - chr7.4:12561309-12561328 None:intergenic 20.0%
!! GAATACAAGAAAAATAGAAA+GGG + chr7.4:12560825-12560844 MS.gene96987:intron 20.0%
!! TATGGATAAAGAAGAAAAAA+GGG + chr7.4:12563371-12563390 MS.gene96987:intron 20.0%
!! TTTCCATATTTAGCAAAATA+TGG - chr7.4:12560735-12560754 None:intergenic 20.0%
!!! AGATAATATTTATCCTTTTG+CGG + chr7.4:12561160-12561179 MS.gene96987:intron 20.0%
!!! ATTTGGAACTTGAAAAAAAT+TGG + chr7.4:12562563-12562582 MS.gene96987:intron 20.0%
!!! GATTGGATTTTTTTTTTTGA+AGG - chr7.4:12561389-12561408 None:intergenic 20.0%
!!! GTTTTTAAATGATTGAATGT+TGG + chr7.4:12563483-12563502 MS.gene96987:intron 20.0%
!!! TCTCTTTTTTTATATACGTA+CGG + chr7.4:12562321-12562340 MS.gene96987:intron 20.0%
!!! TTGGATTTTTTTTTTTGAAG+GGG - chr7.4:12561387-12561406 None:intergenic 20.0%
!!! TTTTCTTCTTTCAGTTAAAA+CGG + chr7.4:12561113-12561132 MS.gene96987:intron 20.0%
!!! TTTTTTCTTTTAACCATGAT+TGG + chr7.4:12562132-12562151 MS.gene96987:intron 20.0%
!!! TTTTTTTTAACATGCGAAAA+TGG - chr7.4:12563779-12563798 None:intergenic 20.0%
! AAAAAAATTGAAGGAAGGTA+TGG + chr7.4:12562006-12562025 MS.gene96987:intron 25.0%
! AAAAAGAGAAATTCTTGTGT+AGG - chr7.4:12562310-12562329 None:intergenic 25.0%
! AAGTTCTATTAGTTAGTTGT+TGG + chr7.4:12563554-12563573 MS.gene96987:intron 25.0%
! AATACATAAAAACTCACCTT+AGG - chr7.4:12563070-12563089 None:intergenic 25.0%
! ACAAGACAACTATATACAAA+AGG - chr7.4:12561004-12561023 None:intergenic 25.0%
! AGAAGAAAAATGATGAGATA+AGG - chr7.4:12561102-12561121 None:intergenic 25.0%
! AGAATACTAACTGCAAATAA+TGG + chr7.4:12562161-12562180 MS.gene96987:intron 25.0%
! AGATCCAAATAATAATAGCA+CGG + chr7.4:12564241-12564260 MS.gene96987:CDS 25.0%
! ATAATATCATCCATCTTCTA+TGG + chr7.4:12563353-12563372 MS.gene96987:intron 25.0%
! ATCTTAAACGTAAAACTGAA+GGG - chr7.4:12561582-12561601 None:intergenic 25.0%
! ATTAATTGATGTAGATTTGC+TGG + chr7.4:12560964-12560983 MS.gene96987:intron 25.0%
! CTATGGATAAAGAAGAAAAA+AGG + chr7.4:12563370-12563389 MS.gene96987:intron 25.0%
! GAAATGAGATAATAGTAAGA+AGG + chr7.4:12562410-12562429 MS.gene96987:intron 25.0%
! GCATAATTAACATATATACC+TGG - chr7.4:12560384-12560403 None:intergenic 25.0%
! TAAAAATTCATTCGTATTGG+TGG + chr7.4:12563583-12563602 MS.gene96987:intron 25.0%
! TATCTTAAACGTAAAACTGA+AGG - chr7.4:12561583-12561602 None:intergenic 25.0%
! TGTTTGTAAGAATGATAGTT+AGG - chr7.4:12562086-12562105 None:intergenic 25.0%
! TTACAAAAAGATCACAAATG+AGG + chr7.4:12560299-12560318 MS.gene96987:CDS 25.0%
! TTCAAAATTTGTAACCACTA+TGG + chr7.4:12562509-12562528 MS.gene96987:intron 25.0%
! TTTATGAGAAATTCTTGTGT+AGG + chr7.4:12562054-12562073 MS.gene96987:intron 25.0%
! TTTCCTATATTTCATCATGA+GGG - chr7.4:12561831-12561850 None:intergenic 25.0%
!! AAAAGGTTACCTTAATTTGA+TGG + chr7.4:12563849-12563868 MS.gene96987:intron 25.0%
!! TTTTCCTATATTTCATCATG+AGG - chr7.4:12561832-12561851 None:intergenic 25.0%
!!! AATCTAAGAAAGTGTTCTTT+TGG - chr7.4:12560766-12560785 None:intergenic 25.0%
!!! CTCTTACTTTTTATTTTACC+CGG - chr7.4:12561941-12561960 None:intergenic 25.0%
!!! CTCTTTTTTTATATACGTAC+GGG + chr7.4:12562322-12562341 MS.gene96987:intron 25.0%
!!! CTTTCTCTCTTATTTTCTTT+TGG - chr7.4:12560795-12560814 None:intergenic 25.0%
!!! TCTTACTTTTTATTTTACCC+GGG - chr7.4:12561940-12561959 None:intergenic 25.0%
!!! TTTGAGTTCTATTTTCTACA+AGG + chr7.4:12561059-12561078 MS.gene96987:intron 25.0%
!!! TTTTATTTTTGTGTGTAACC+CGG + chr7.4:12561919-12561938 MS.gene96987:intron 25.0%
AAAAATAGAAAGGGATGGAA+AGG + chr7.4:12560834-12560853 MS.gene96987:intron 30.0%
AAATACACGCCATCAAATTA+AGG - chr7.4:12563861-12563880 None:intergenic 30.0%
ACAAATGAGGAAGTTCTTAA+GGG + chr7.4:12560312-12560331 MS.gene96987:CDS 30.0%
ACAAGAAAAATAGAAAGGGA+TGG + chr7.4:12560829-12560848 MS.gene96987:intron 30.0%
ACATCAAGAATGAAACATGA+AGG + chr7.4:12563432-12563451 MS.gene96987:intron 30.0%
AGATGATGACATCAAAGTTA+GGG - chr7.4:12564084-12564103 None:intergenic 30.0%
ATACTAACTGCAAATAATGG+TGG + chr7.4:12562164-12562183 MS.gene96987:intron 30.0%
CAAAGCTTAATGCAAATGAA+TGG + chr7.4:12562813-12562832 MS.gene96987:CDS 30.0%
CATCAAGAATGAAACATGAA+GGG + chr7.4:12563433-12563452 MS.gene96987:intron 30.0%
GCATGAAATTAACACATGAT+GGG - chr7.4:12562776-12562795 None:intergenic 30.0%
GTTACTCAAATTAGTTCCAA+AGG + chr7.4:12564263-12564282 MS.gene96987:CDS 30.0%
GTTGTTGTCTATATAGTTGT+TGG + chr7.4:12562719-12562738 MS.gene96987:intron 30.0%
GTTTGTAAGAATGATACGTT+AGG + chr7.4:12562278-12562297 MS.gene96987:intron 30.0%
TAAATCCAGTTGCATATTTG+CGG - chr7.4:12562859-12562878 None:intergenic 30.0%
TAGAGAGTCATATCAAAGAA+AGG - chr7.4:12561748-12561767 None:intergenic 30.0%
TCTTCTTTATCCATAGAAGA+TGG - chr7.4:12563366-12563385 None:intergenic 30.0%
TGAGATAATAGTAAGAAGGA+AGG + chr7.4:12562414-12562433 MS.gene96987:intron 30.0%
TGCATGAAATTAACACATGA+TGG - chr7.4:12562777-12562796 None:intergenic 30.0%
TTCCTATATTTCATCATGAG+GGG - chr7.4:12561830-12561849 None:intergenic 30.0%
! AAATTTTTGTTGATCACAGG+AGG + chr7.4:12563950-12563969 MS.gene96987:intron 30.0%
! AATGGTATTTCTTTAGCTTC+CGG + chr7.4:12562831-12562850 MS.gene96987:CDS 30.0%
! ACTTTGTATTTTACCGCAAA+AGG - chr7.4:12561176-12561195 None:intergenic 30.0%
! CTAATGCCAATTTTGTGTAA+GGG + chr7.4:12563616-12563635 MS.gene96987:intron 30.0%
! CTGCCATATTTTGCTAAATA+TGG + chr7.4:12560729-12560748 MS.gene96987:intron 30.0%
! GTAACCGTGCTATTATTATT+TGG - chr7.4:12564248-12564267 None:intergenic 30.0%
! GTCAAATTTTTGTTGATCAC+AGG + chr7.4:12563947-12563966 MS.gene96987:intron 30.0%
! GTGAAATAACCTATGTTTTG+AGG - chr7.4:12560609-12560628 None:intergenic 30.0%
! TAATGCCAATTTTGTGTAAG+GGG + chr7.4:12563617-12563636 MS.gene96987:intron 30.0%
! TCATCATGGAAGAATTGTTT+TGG - chr7.4:12564196-12564215 None:intergenic 30.0%
! TTTCTTTTAACCATGATTGG+TGG + chr7.4:12562135-12562154 MS.gene96987:intron 30.0%
!! AAATGATGAAGTGTTGTCAT+GGG - chr7.4:12564164-12564183 None:intergenic 30.0%
!! TAAATGATGAAGTGTTGTCA+TGG - chr7.4:12564165-12564184 None:intergenic 30.0%
!! TGAGGTTGATAATGATAATG+TGG + chr7.4:12564376-12564395 MS.gene96987:CDS 30.0%
!!! AATAACCTATGTTTTGAGGT+TGG - chr7.4:12560605-12560624 None:intergenic 30.0%
!!! AATTTGATGGCGTGTATTTT+TGG + chr7.4:12563862-12563881 MS.gene96987:intron 30.0%
!!! ATGGAAGAATTGTTTTGGTT+TGG - chr7.4:12564191-12564210 None:intergenic 30.0%
!!! CTCTTATTTTCTTTTGGTTG+TGG - chr7.4:12560789-12560808 None:intergenic 30.0%
!!! TTTATTTTTGTGTGTAACCC+GGG + chr7.4:12561920-12561939 MS.gene96987:intron 30.0%
AAAATCCAATCATTGCAGCA+AGG + chr7.4:12561398-12561417 MS.gene96987:intron 35.0%
AACAACACGTGACTAAGTTA+AGG - chr7.4:12562705-12562724 None:intergenic 35.0%
AACAACTAGAGACAGAACAA+AGG - chr7.4:12560670-12560689 None:intergenic 35.0%
ACAAACAGAGCAACTATATC+TGG + chr7.4:12562881-12562900 MS.gene96987:CDS 35.0%
ACATAAAAACTCACCTTAGG+AGG - chr7.4:12563067-12563086 None:intergenic 35.0%
ACCACATTGGCAAAATGATA+GGG - chr7.4:12563094-12563113 None:intergenic 35.0%
ATATGGATTCTTGTGGAACA+TGG + chr7.4:12564295-12564314 MS.gene96987:CDS 35.0%
ATCAACACTGCTGTCTTTAA+CGG + chr7.4:12561673-12561692 MS.gene96987:intron 35.0%
ATGAACCCCTTACACAAAAT+TGG - chr7.4:12563625-12563644 None:intergenic 35.0%
ATTAGTTCCAAAGGTGATGA+TGG + chr7.4:12564272-12564291 MS.gene96987:CDS 35.0%
ATTCTTGTGGAACATGGATT+TGG + chr7.4:12564301-12564320 MS.gene96987:CDS 35.0%
CACAAATGAGGAAGTTCTTA+AGG + chr7.4:12560311-12560330 MS.gene96987:CDS 35.0%
CACTAGTATGTGGTAAGATT+TGG + chr7.4:12562546-12562565 MS.gene96987:intron 35.0%
CTCCAAATGGTATCAAAACA+GGG + chr7.4:12563002-12563021 MS.gene96987:CDS 35.0%
CTGTTTCACGAGAATATTGA+AGG - chr7.4:12564223-12564242 None:intergenic 35.0%
CTTGGATAAAATCGAAATCC+AGG - chr7.4:12560252-12560271 None:intergenic 35.0%
CTTGGATGCAATAAGATTTG+AGG + chr7.4:12564358-12564377 MS.gene96987:CDS 35.0%
GAAGAAAATAGCCTAGAAGA+TGG + chr7.4:12564323-12564342 MS.gene96987:CDS 35.0%
GAATACCAACCTCAAAACAT+AGG + chr7.4:12560597-12560616 MS.gene96987:intron 35.0%
GAATTGTTGTGTGTTGAGTT+TGG - chr7.4:12564039-12564058 None:intergenic 35.0%
GAGATGATGACATCAAAGTT+AGG - chr7.4:12564085-12564104 None:intergenic 35.0%
GAGCAACTATATCTGGATAT+TGG + chr7.4:12562888-12562907 MS.gene96987:CDS 35.0%
GTACGAAAGACACAAACAAA+AGG - chr7.4:12560567-12560586 None:intergenic 35.0%
GTCATATGTCTATTGTGTGT+TGG - chr7.4:12562617-12562636 None:intergenic 35.0%
TAGCAAATACTTCCCTAACT+TGG + chr7.4:12562475-12562494 MS.gene96987:intron 35.0%
TATAGGAATAGAGCTCCAAA+TGG + chr7.4:12562989-12563008 MS.gene96987:CDS 35.0%
TGTCATGAAACACTAGTATG+TGG + chr7.4:12562536-12562555 MS.gene96987:intron 35.0%
TTATCCAAGTGATGAGGAAT+TGG + chr7.4:12560263-12560282 MS.gene96987:CDS 35.0%
TTGTCAGATCAAGTTCATGA+AGG - chr7.4:12560703-12560722 None:intergenic 35.0%
TTTCATGACATCAACCATAG+TGG - chr7.4:12562526-12562545 None:intergenic 35.0%
! ATGGTATTTCTTTAGCTTCC+GGG + chr7.4:12562832-12562851 MS.gene96987:CDS 35.0%
! GAAAGACATTGGTGTTCTAT+AGG + chr7.4:12562972-12562991 MS.gene96987:CDS 35.0%
! GCTAATGCCAATTTTGTGTA+AGG + chr7.4:12563615-12563634 MS.gene96987:intron 35.0%
! TCGATTTTATCCAAGTGATG+AGG + chr7.4:12560257-12560276 MS.gene96987:CDS 35.0%
!! AATGATGAAGTGTTGTCATG+GGG - chr7.4:12564163-12564182 None:intergenic 35.0%
!! ATGATGGATATGGATTCTTG+TGG + chr7.4:12564288-12564307 MS.gene96987:CDS 35.0%
!! CAAGTTTGTTATAGCCACTA+GGG - chr7.4:12564127-12564146 None:intergenic 35.0%
!! TCAAGTTTGTTATAGCCACT+AGG - chr7.4:12564128-12564147 None:intergenic 35.0%
!!! TTTTTTGAAGGGGCAATGAT+TGG - chr7.4:12561377-12561396 None:intergenic 35.0%
AAAACGTAGTTGCACCACAT+TGG - chr7.4:12563107-12563126 None:intergenic 40.0%
AAATAGCCTAGAAGATGGTG+TGG + chr7.4:12564328-12564347 MS.gene96987:CDS 40.0%
AAGTTTCAAGCCTCCAAGTT+AGG - chr7.4:12562491-12562510 None:intergenic 40.0%
AATTACCAAACCATCCCTAG+TGG + chr7.4:12564110-12564129 MS.gene96987:CDS 40.0%
ACCTTCACATATGTGAACCA+TGG + chr7.4:12560352-12560371 MS.gene96987:CDS 40.0%
AGTTTCAAGCCTCCAAGTTA+GGG - chr7.4:12562490-12562509 None:intergenic 40.0%
ATTTCATGCATTGCATGCAG+AGG + chr7.4:12562787-12562806 MS.gene96987:intron 40.0%
CAAATACTTCCCTAACTTGG+AGG + chr7.4:12562478-12562497 MS.gene96987:intron 40.0%
CAAATGGTATCAAAACAGGG+TGG + chr7.4:12563005-12563024 MS.gene96987:CDS 40.0%
CAATCACACAAGAGGTTGTA+GGG + chr7.4:12562945-12562964 MS.gene96987:CDS 40.0%
CACCACATTGGCAAAATGAT+AGG - chr7.4:12563095-12563114 None:intergenic 40.0%
CACGTGACTAAGTTAAGGTA+AGG - chr7.4:12562700-12562719 None:intergenic 40.0%
CTGGATATTGGAAAGCAACT+GGG + chr7.4:12562900-12562919 MS.gene96987:CDS 40.0%
GACTAAGTTAAGGTAAGGTC+AGG - chr7.4:12562695-12562714 None:intergenic 40.0%
GATGACATCAAAGTTAGGGA+TGG - chr7.4:12564080-12564099 None:intergenic 40.0%
GCTCCAAATGGTATCAAAAC+AGG + chr7.4:12563001-12563020 MS.gene96987:CDS 40.0%
GGATAAAATCGAAATCCAGG+AGG - chr7.4:12560249-12560268 None:intergenic 40.0%
GTCCCCTCATGATGAAATAT+AGG + chr7.4:12561825-12561844 MS.gene96987:intron 40.0%
GTGTCAAAAGAAGACGACTA+CGG - chr7.4:12563728-12563747 None:intergenic 40.0%
GTTAGATCCAATCACACAAG+AGG + chr7.4:12562937-12562956 MS.gene96987:CDS 40.0%
TCCATATCCATCATCACCTT+TGG - chr7.4:12564282-12564301 None:intergenic 40.0%
TCTGGATATTGGAAAGCAAC+TGG + chr7.4:12562899-12562918 MS.gene96987:CDS 40.0%
TGTAGGGATGAGAAAGACAT+TGG + chr7.4:12562961-12562980 MS.gene96987:CDS 40.0%
TTGTGTAAGGGGTTCATAGT+TGG + chr7.4:12563628-12563647 MS.gene96987:intron 40.0%
! CTTTTAACCATGATTGGTGG+TGG + chr7.4:12562138-12562157 MS.gene96987:intron 40.0%
! TTTGTTATAGCCACTAGGGA+TGG - chr7.4:12564123-12564142 None:intergenic 40.0%
!! ATGATGAAGTGTTGTCATGG+GGG - chr7.4:12564162-12564181 None:intergenic 40.0%
!! GGGATGGTTTGGTAATTTGT+TGG - chr7.4:12564107-12564126 None:intergenic 40.0%
!! TCCAAAGGTGATGATGGATA+TGG + chr7.4:12564278-12564297 MS.gene96987:CDS 40.0%
!!! CACCCTGTTTTGATACCATT+TGG - chr7.4:12563007-12563026 None:intergenic 40.0%
ACGACTACGGTTTACAACCA+CGG - chr7.4:12563715-12563734 None:intergenic 45.0%
AGCAACTGGGAAAGATCGTA+TGG + chr7.4:12562913-12562932 MS.gene96987:CDS 45.0%
CACACCAATTCCTCATCACT+TGG - chr7.4:12560270-12560289 None:intergenic 45.0%
CCAATCACACAAGAGGTTGT+AGG + chr7.4:12562944-12562963 MS.gene96987:CDS 45.0%
CCTACAACCTCTTGTGTGAT+TGG - chr7.4:12562947-12562966 None:intergenic 45.0%
GAAAGGGATGGAAAGGTAAG+AGG + chr7.4:12560841-12560860 MS.gene96987:intron 45.0%
GACATCAAAGTTAGGGATGG+AGG - chr7.4:12564077-12564096 None:intergenic 45.0%
GCCATGGTTCACATATGTGA+AGG - chr7.4:12560356-12560375 None:intergenic 45.0%
GGAATCCTTGCTGCAATGAT+TGG - chr7.4:12561406-12561425 None:intergenic 45.0%
GGATGGAAAGGTAAGAGGAA+GGG + chr7.4:12560846-12560865 MS.gene96987:intron 45.0%
GTATTCTCCACCACCAATCA+TGG - chr7.4:12562148-12562167 None:intergenic 45.0%
TATAGCCACTAGGGATGGTT+TGG - chr7.4:12564118-12564137 None:intergenic 45.0%
TATATACCTGGAAGCTGCCA+TGG - chr7.4:12560372-12560391 None:intergenic 45.0%
TTGTTGATCACAGGAGGACT+GGG + chr7.4:12563956-12563975 MS.gene96987:intron 45.0%
TTTGTTGATCACAGGAGGAC+TGG + chr7.4:12563955-12563974 MS.gene96987:intron 45.0%
! AATAATGGTGGAGAGAGAGG+AGG + chr7.4:12562176-12562195 MS.gene96987:intron 45.0%
! GCAAATAATGGTGGAGAGAG+AGG + chr7.4:12562173-12562192 MS.gene96987:intron 45.0%
! GCCCTATCATTTTGCCAATG+TGG + chr7.4:12563090-12563109 MS.gene96987:intron 45.0%
! GTCATGAGCTTTGTAGCATG+AGG - chr7.4:12561342-12561361 None:intergenic 45.0%
! GTCGTCTTCTTTTGACACGT+CGG + chr7.4:12563730-12563749 MS.gene96987:intron 45.0%
! TGTTCTTTGTTGCTTGACCG+TGG + chr7.4:12563695-12563714 MS.gene96987:intron 45.0%
!! AAAAAAAAAAAAAAAATTGA+AGG + chr7.4:12561997-12562016 MS.gene96987:intron 5.0%
!! ATAAGAAATTAATATAATAA+AGG - chr7.4:12561555-12561574 None:intergenic 5.0%
!! TAAGAAATTAATATAATAAA+GGG - chr7.4:12561554-12561573 None:intergenic 5.0%
!!! CAATTTTTTTTTTTTTTTTA+TGG - chr7.4:12561996-12562015 None:intergenic 5.0%
!!! TGTTTTATTTTAAAATAATT+TGG - chr7.4:12562233-12562252 None:intergenic 5.0%
AGATGGTGTGGCTTCAGACT+TGG + chr7.4:12564340-12564359 MS.gene96987:CDS 50.0%
ATAGGAGCTTCACTACCTCC+TGG + chr7.4:12560231-12560250 MS.gene96987:CDS 50.0%
CAGTTGCATATTTGCGGTCC+CGG - chr7.4:12562853-12562872 None:intergenic 50.0%
CCAATGCTCAGACAAGCAAG+CGG - chr7.4:12563663-12563682 None:intergenic 50.0%
CTGAAGCCACACCATCTTCT+AGG - chr7.4:12564337-12564356 None:intergenic 50.0%
GGGATGGAAAGGTAAGAGGA+AGG + chr7.4:12560845-12560864 MS.gene96987:intron 50.0%
TCATGCATTGCATGCAGAGG+TGG + chr7.4:12562790-12562809 MS.gene96987:intron 50.0%
!!! TGGCGTGTATTTTTGGCGTG+AGG + chr7.4:12563869-12563888 MS.gene96987:intron 50.0%
CCGCTTGCTTGTCTGAGCAT+TGG + chr7.4:12563660-12563679 MS.gene96987:intron 55.0%
CGGGACCGCAAATATGCAAC+TGG + chr7.4:12562851-12562870 MS.gene96987:CDS 55.0%
GACACCACACATGCCTCCTA+AGG + chr7.4:12563051-12563070 MS.gene96987:CDS 55.0%
TGTGAACCATGGCAGCTTCC+AGG + chr7.4:12560363-12560382 MS.gene96987:CDS 55.0%
! CTCACCTTAGGAGGCATGTG+TGG - chr7.4:12563058-12563077 None:intergenic 55.0%


Chromosome Type Strat End Strand Name
chr7.4 gene 12560216 12564409 12560216 ID=MS.gene96987
chr7.4 mRNA 12560216 12564409 12560216 ID=MS.gene96987.t1;Parent=MS.gene96987
chr7.4 exon 12560216 12560384 12560216 ID=MS.gene96987.t1.exon1;Parent=MS.gene96987.t1
chr7.4 CDS 12560216 12560384 12560216 ID=cds.MS.gene96987.t1;Parent=MS.gene96987.t1
chr7.4 exon 12562807 12563072 12562807 ID=MS.gene96987.t1.exon2;Parent=MS.gene96987.t1
chr7.4 CDS 12562807 12563072 12562807 ID=cds.MS.gene96987.t1;Parent=MS.gene96987.t1
chr7.4 exon 12563969 12564409 12563969 ID=MS.gene96987.t1.exon3;Parent=MS.gene96987.t1
chr7.4 CDS 12563969 12564409 12563969 ID=cds.MS.gene96987.t1;Parent=MS.gene96987.t1
Gene Sequence

>MS.gene96987

ATGGGTTTGAGAGACATAGGAGCTTCACTACCTCCTGGATTTCGATTTTATCCAAGTGATGAGGAATTGGTGTGTCACTATCTTTACAAAAAGATCACAAATGAGGAAGTTCTTAAGGGTACTTTGATTGAAATTGACCTTCACATATGTGAACCATGGCAGCTTCCAGGTATATATGTTAATTATGCATAATTTTTAAAATATGCTAATTAATTGTGTATATTTATCTATTAATTATCTGAATTATCTTCATGGCTTGATTTAATTTATAGAGTTTTAATAATTTGTTTGATTTCTGGAATTTTTGTTTTGTTTGTCACTGCATGAATTCTTCTCATTTGTTGTTTTCCTTTTGTTTGTGTCTTTCGTACAACAAATATAGAATACCAACCTCAAAACATAGGTTATTTCACATCATAAAAAAAACATAAGTTCTTTGTTTTCTCATAAACCTTTGTTCTGTCTCTAGTTGTTGTGTTGTCTTCCTTCATGAACTTGATCTGACAATCATGTCTGCCATATTTTGCTAAATATGGAAAGTTAAAAACCAAAAGAACACTTTCTTAGATTCCACAACCAAAAGAAAATAAGAGAGAAAGAGAGAGATGAGAATACAAGAAAAATAGAAAGGGATGGAAAGGTAAGAGGAAGGGATCATTATGCATTCAGATGTGTAATGCATTCAATAAATAAAGTAATAGGTTTTTTTTTATAATTTATTAATTACTTTATCTATAAGATATACTTCATTAATTGATGTAGATTTGCTGGTATAATTGTTTTTGCCTTTTGTATATAGTTGTCTTGTACTATAATACATTAATGAAGATGCAAGTGATGTTTTTTGAGTTCTATTTTCTACAAGGTTTCTTCTTGTCTTTTTCCTTATCTCATCATTTTTCTTCTTTCAGTTAAAACGGATTTAAAAAGCAATCAATTTATGAAGATAATATTTATCCTTTTGCGGTAAAATACAAAGTATAAGACAACAAAGATTTACTTTAATTTAATTCACATGAATAATATAATATGATCTAAAAGATTCTGCAGTGTGCACTATCAACGAATCAAAATATACAAACACTATGCACCATACAGTAATATTATTCTTAGATGATAATAACCTCATGCTACAAAGCTCATGACAGTATATTAATTCCAATCATTGCCCCTTCAAAAAAAAAAATCCAATCATTGCAGCAAGGATTCCCCTGTATTTTTTTCATATAAAAAACGTTTTTACTTTTTTCTACATCATATATAATCGTATATATTTTTATTTAAAATATTAATTTATTTATGAGTTGATTTTTTGTCACTTATTTAAATGAGTTTCCCTTTATTATATTAATTTCTTATCAGTCCCTTCAGTTTTACGTTTAAGATAGATAAAAAAATTGGCAACTATTATTATTTAATTGAACAAAGTTGACAAAGTTATACATTTTCATCAAGCAATCAACACTGCTGTCTTTAACGGTTTTATTATTCAATCACATACGTGTATAAATATACATACGCATGAATTACCTTTCTTTGATATGACTCTCTATCTACATGATTATGACTCATTATCATTCATATTATGTTTAGATATGTCATTTTTAGTGTCCCCTCATGATGAAATATAGGAAAAGCTCATTTTTATAAGAGAAATGATTTTTTGCAGTTGACATCAGAATTTTGATGTTGAAATAGTGTCTTTTTATTTTTGTGTGTAACCCGGGTAAAATAAAAAGTAAGAGAGATTTCAAATAACAAAATTAATTGGTATAGTCCATAAAAAAAAAAAAAAAATTGAAGGAAGGTATGGTCCATAAAAATTAAAAAGCTATTTTTTTATGAGAAATTCTTGTGTAGGAACGAACCTAACTATCATTCTTACAAACAACAAATTAAAACATGACACGTCACTTTTTTTTCTTTTAACCATGATTGGTGGTGGAGAATACTAACTGCAAATAATGGTGGAGAGAGAGGAGGAGCAGTTATTTTTCATTTACTTAAATTATTTCCAAATTATTTTAAAATAAAACAATGATGTGTCATGTTTTAATTTGTTGTTTGTAAGAATGATACGTTAGGTTCGTTCCTACACAAGAATTTCTCTTTTTTTATATACGTACGGGACATATACATAATTTTTTCTCAAGATTAATTAGTTCTTATTCATCTACAACATTATGAAAGCATTGAAATGAGATAATAGTAAGAAGGAAGGCTATACATAAATAGAAAATACTCCTTTAAAAAAATTAGTAGCAAATACTTCCCTAACTTGGAGGCTTGAAACTTCAAAATTTGTAACCACTATGGTTGATGTCATGAAACACTAGTATGTGGTAAGATTTGGAACTTGAAAAAAATTGGTGTCATAATTCGTAGATGACATGTGATTCCAACACACAATAGACATATGACATTTATTGTTTCTAAAATTGAACTACTAGACATATTAATTGCATGTACTATCATACCTGACCTTACCTTAACTTAGTCACGTGTTGTTGTCTATATAGTTGTTGGTATTTATTAATTAATGTGTATAAAAAATTGACCCATCATGTGTTAATTTCATGCATTGCATGCAGAGGTGGCAAAGCTTAATGCAAATGAATGGTATTTCTTTAGCTTCCGGGACCGCAAATATGCAACTGGATTTAGAACAAACAGAGCAACTATATCTGGATATTGGAAAGCAACTGGGAAAGATCGTATGGTGTTAGATCCAATCACACAAGAGGTTGTAGGGATGAGAAAGACATTGGTGTTCTATAGGAATAGAGCTCCAAATGGTATCAAAACAGGGTGGATTATGCATGAATTTCGCTTAGAGACACCACACATGCCTCCTAAGGTGAGTTTTTATGTATTGCCCTATCATTTTGCCAATGTGGTGCAACTACGTTTTTATTTTATTTTTTAAAAAAAGTTTTAGTCTCATTTCAAAACATTTAACATATCATCAAAAGTATAAAAATTAAGGGCATCATATACTCTTGACATTGTGAACATGTGAGCTCTGATAATGTGATGTCAAAGTAATTCACAAAGTCATGTGTTTCGCATAAGCAAACTAATTTACATAATACAAGTAATTGTGTTATATAAAAAAACTGCATACTACAATTAATGACATAATATCATCCATCTTCTATGGATAAAGAAGAAAAAAGGGAAAATTATAGCTTCTCAAATACTTCAAAACATTCAACAACATCAAGAATGAAACATGAAGGGTATAAGATACTTTCGACATTGTTGAACGTTTTTAAATGATTGAATGTTGGATACATACATATTCAACAAAAACACTAGTATACCATATTAAATAAAATAAGTTCTATTAGTTAGTTGTTGGATAAAGTAAAAATTCATTCGTATTGGTGGATGAAGACAGCTAATGCCAATTTTGTGTAAGGGGTTCATAGTTGGTTGTTGTGTCCGCTTGCTTGTCTGAGCATTGGTTAGTTAGTTTCTGTTCTTTGTTGCTTGACCGTGGTTGTAAACCGTAGTCGTCTTCTTTTGACACGTCGGCTTCTTTGTTGTTAATATATATTCCATTTTCGCATGTTAAAAAAAAAAATCTAAGGGAAAAATAAAATACTGCATTTTTTATGACAAATGAAAAATAAAAGGTTACCTTAATTTGATGGCGTGTATTTTTGGCGTGAGGATAAAGTTTATTTACGCGTATATTTTCTTGTTTCACATATATTTTTGTTAATTAGGTCAAATTTTTGTTGATCACAGGAGGACTGGGTATTGTGTAGAGTCTTTCACAAAAGCAAAGAAGAGAACAACAACAACAATAATAGTTCCAAACTCAACACACAACAATTCATGTATGAGACAACACCTCCATCCCTAACTTTGATGTCATCATCTCCAACAAATTACCAAACCATCCCTAGTGGCTATAACAAACTTGATTCTTTTTCTTCCCCCATGACAACACTTCATCATTTAAATCCAAACCAAAACAATTCTTCCATGATGAATCTCCTTCAATATTCTCGTGAAACAGATCCAAATAATAATAGCACGGTTACTCAAATTAGTTCCAAAGGTGATGATGGATATGGATTCTTGTGGAACATGGATTTGGAAGAAAATAGCCTAGAAGATGGTGTGGCTTCAGACTTGGATGCAATAAGATTTGAGGTTGATAATGATAATGTGGTCTTACTATAA
Protein sequence

>MS.gene96987.t1

MGLRDIGASLPPGFRFYPSDEELVCHYLYKKITNEEVLKGTLIEIDLHICEPWQLPEVAKLNANEWYFFSFRDRKYATGFRTNRATISGYWKATGKDRMVLDPITQEVVGMRKTLVFYRNRAPNGIKTGWIMHEFRLETPHMPPKEDWVLCRVFHKSKEENNNNNNSSKLNTQQFMYETTPPSLTLMSSSPTNYQTIPSGYNKLDSFSSPMTTLHHLNPNQNNSSMMNLLQYSRETDPNNNSTVTQISSKGDDGYGFLWNMDLEENSLEDGVASDLDAIRFEVDNDNVVLL