Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene97045.t1 | XP_003595580.2 | 70.7 | 396 | 82 | 9 | 1 | 388 | 1 | 370 | 6.20E-138 | 500.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene97045.t1 | Q2HRQ4 | 70.7 | 396 | 82 | 9 | 1 | 388 | 1 | 370 | 4.5e-138 | 500.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene97045.t1 | TF | MADS-M-type |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene97045.t1 | MTR_2g049630 | 75.253 | 396 | 64 | 9 | 1 | 388 | 1 | 370 | 0.0 | 545 |
MS.gene97045.t1 | MTR_2g049610 | 62.882 | 229 | 70 | 6 | 4 | 225 | 2 | 222 | 2.71e-87 | 265 |
MS.gene97045.t1 | MTR_2g049530 | 67.188 | 192 | 59 | 1 | 1 | 188 | 1 | 192 | 8.79e-87 | 262 |
MS.gene97045.t1 | MTR_4g107170 | 44.595 | 222 | 103 | 7 | 1 | 214 | 1 | 210 | 3.09e-53 | 178 |
MS.gene97045.t1 | MTR_4g045977 | 33.252 | 412 | 160 | 16 | 4 | 382 | 2 | 331 | 6.14e-44 | 157 |
MS.gene97045.t1 | MTR_1g115290 | 48.252 | 143 | 63 | 3 | 40 | 172 | 2 | 143 | 6.27e-34 | 124 |
MS.gene97045.t1 | MTR_6g018920 | 38.312 | 154 | 90 | 2 | 4 | 153 | 2 | 154 | 2.27e-28 | 114 |
MS.gene97045.t1 | MTR_1g114730 | 38.312 | 154 | 90 | 2 | 4 | 153 | 2 | 154 | 3.21e-27 | 111 |
MS.gene97045.t1 | MTR_6g005440 | 33.708 | 178 | 108 | 3 | 4 | 177 | 2 | 173 | 5.27e-27 | 110 |
MS.gene97045.t1 | MTR_6g005450 | 32.828 | 198 | 115 | 3 | 4 | 184 | 2 | 198 | 8.64e-26 | 107 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 82 sgRNAs with CRISPR-Local
Find 88 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGGTGAAGGTGTGGAGTTTA+AGG | 0.200238 | 2.2:-37619845 | MS.gene97045:CDS |
AGATTCAAGCTTGCAATAAA+AGG | 0.235091 | 2.2:-37620326 | MS.gene97045:CDS |
CAATCAGAGAAACAATAATT+TGG | 0.236694 | 2.2:-37620682 | MS.gene97045:CDS |
ATGAGTAACAATCCAGATTT+TGG | 0.240718 | 2.2:-37619583 | MS.gene97045:CDS |
AAGTGATGAAACTAGTTTCT+TGG | 0.301809 | 2.2:-37620277 | MS.gene97045:CDS |
CATCATGCATGCCCTCAAAT+TGG | 0.311938 | 2.2:+37619947 | None:intergenic |
CACTTTGGAAATCTCAGTTT+CGG | 0.321791 | 2.2:+37620449 | None:intergenic |
CACAATCTCTTTGTGCACTT+TGG | 0.338528 | 2.2:+37620434 | None:intergenic |
TTAGATATATATTGCCTTTG+AGG | 0.360079 | 2.2:+37620246 | None:intergenic |
TTGTCAGTACGGCCAAAATC+TGG | 0.361644 | 2.2:+37619571 | None:intergenic |
GAATGGCTTGCTAAACTTGA+TGG | 0.361953 | 2.2:-37620081 | MS.gene97045:CDS |
ACTTCACAAATTCACCGAAT+TGG | 0.365814 | 2.2:+37620193 | None:intergenic |
ACTTTCATTGGCATTCTAGA+TGG | 0.373255 | 2.2:-37620351 | MS.gene97045:CDS |
CTTGCTAAACTTGATGGAAT+TGG | 0.393389 | 2.2:-37620075 | MS.gene97045:CDS |
TTAGCAAGCCATTCTTGAAC+AGG | 0.402628 | 2.2:+37620090 | None:intergenic |
GAAACAGGAGGCAAACTAAC+AGG | 0.403384 | 2.2:+37619883 | None:intergenic |
GAACAACTCAAAACTTTCAT+TGG | 0.406346 | 2.2:-37620363 | MS.gene97045:CDS |
AGACTTCAAAGGATCATAGA+TGG | 0.414281 | 2.2:+37619906 | None:intergenic |
TTGATTGTATATGATGGTTA+TGG | 0.415733 | 2.2:-37620612 | MS.gene97045:CDS |
AATGGCTGAACCTGGAGAAT+TGG | 0.416289 | 2.2:-37619818 | MS.gene97045:CDS |
TTCAAATTCAAACCAATTTG+AGG | 0.423199 | 2.2:-37619959 | MS.gene97045:CDS |
GAATCTTGTGGCGTAGTCAT+TGG | 0.433592 | 2.2:+37620579 | None:intergenic |
TGTGAAGTTGGATGATGAAA+TGG | 0.438732 | 2.2:-37620178 | MS.gene97045:CDS |
ACTTGATGGAATTGGTGAAA+TGG | 0.440564 | 2.2:-37620067 | MS.gene97045:CDS |
TCAAATTGGTTTGAATTTGA+AGG | 0.443439 | 2.2:+37619961 | None:intergenic |
CCTTCCATGTTCATGAAGCA+TGG | 0.443974 | 2.2:+37620387 | None:intergenic |
TCAAATTCAAACCAATTTGA+GGG | 0.445030 | 2.2:-37619958 | MS.gene97045:CDS |
AGTTGGTTAGTCGACGAAAC+AGG | 0.451962 | 2.2:+37619868 | None:intergenic |
TGTGGAGTTTAAGGATCTAA+TGG | 0.457159 | 2.2:-37619836 | MS.gene97045:CDS |
TCACCATCATCTAGTTTACT+AGG | 0.464092 | 2.2:+37619742 | None:intergenic |
AAATGAAGAAGATGCAACTT+TGG | 0.464893 | 2.2:-37619614 | MS.gene97045:CDS |
CAAATTGGTTTGAATTTGAA+GGG | 0.468080 | 2.2:+37619962 | None:intergenic |
TGGGCAAACCTGTTCAAGAA+TGG | 0.474989 | 2.2:-37620098 | MS.gene97045:CDS |
GAGAATTGGCTGATCAAGAA+TGG | 0.477671 | 2.2:-37619804 | MS.gene97045:CDS |
ATTCGGTGAATTTGTGAAGT+TGG | 0.481270 | 2.2:-37620190 | MS.gene97045:CDS |
TTCATCACCTTCATCTTGAC+TGG | 0.485286 | 2.2:+37619699 | None:intergenic |
TCTTGATCAGCCAATTCTCC+AGG | 0.485314 | 2.2:+37619808 | None:intergenic |
ATGAAGCATGGGTGCCAAGT+TGG | 0.489072 | 2.2:+37620399 | None:intergenic |
CTTCCATGTTCATGAAGCAT+GGG | 0.496644 | 2.2:+37620388 | None:intergenic |
CAAAGTGAAACTAACCAATT+CGG | 0.502707 | 2.2:-37620207 | MS.gene97045:CDS |
TACAAAGATCTTTGATGTGA+AGG | 0.505626 | 2.2:-37620499 | MS.gene97045:CDS |
TCATGTTGATGTGCAACAAA+GGG | 0.515172 | 2.2:-37620034 | MS.gene97045:CDS |
CAATTTGAGGGCATGCATGA+TGG | 0.516426 | 2.2:-37619946 | MS.gene97045:CDS |
GCAGAAATGGGACGTGCTCG+TGG | 0.524261 | 2.2:-37620756 | None:intergenic |
AAATGGCTGAACCTAGAGAA+TGG | 0.526305 | 2.2:-37620161 | MS.gene97045:CDS |
TACGAGCAACAAAAGATTGA+GGG | 0.530722 | 2.2:-37620528 | MS.gene97045:CDS |
GCTTGCTTGATTGTATATGA+TGG | 0.536036 | 2.2:-37620618 | MS.gene97045:CDS |
GCACCCATGCTTCATGAACA+TGG | 0.536937 | 2.2:-37620391 | MS.gene97045:CDS |
TGAAGAAGATGCAACTTTGG+AGG | 0.540963 | 2.2:-37619611 | MS.gene97045:CDS |
ACTCCACACCTTCACCAAGT+TGG | 0.544036 | 2.2:+37619851 | None:intergenic |
ATACGAGCAACAAAAGATTG+AGG | 0.544317 | 2.2:-37620529 | MS.gene97045:CDS |
ATCATGTTGATGTGCAACAA+AGG | 0.544586 | 2.2:-37620035 | MS.gene97045:CDS |
AGAGAATGGACTGGTCAACT+TGG | 0.545153 | 2.2:-37620147 | MS.gene97045:CDS |
CACTGCTCACACACAACGCA+TGG | 0.545176 | 2.2:-37619992 | MS.gene97045:CDS |
AGTTGACCAGTCCATTCTCT+AGG | 0.550305 | 2.2:+37620150 | None:intergenic |
AAGGATCTAATGGCTGAACC+TGG | 0.553969 | 2.2:-37619826 | MS.gene97045:CDS |
CCATGCTTCATGAACATGGA+AGG | 0.556845 | 2.2:-37620387 | MS.gene97045:CDS |
GATCATAGATGGGTTGCCAT+TGG | 0.557839 | 2.2:+37619917 | None:intergenic |
AGAAGATGCAACTTTGGAGG+AGG | 0.563842 | 2.2:-37619608 | MS.gene97045:CDS |
GCTCCTAGTAAACTAGATGA+TGG | 0.572128 | 2.2:-37619745 | MS.gene97045:CDS |
GACTTCAAAGGATCATAGAT+GGG | 0.573080 | 2.2:+37619907 | None:intergenic |
GAAGATGCAACTTTGGAGGA+GGG | 0.576564 | 2.2:-37619607 | MS.gene97045:CDS |
GTCAAGATGATGTGTTTGCA+TGG | 0.582853 | 2.2:-37619660 | MS.gene97045:CDS |
GTATATGATGGTTATGGTGA+TGG | 0.584410 | 2.2:-37620606 | MS.gene97045:CDS |
CATGCTTCATGAACATGGAA+GGG | 0.587977 | 2.2:-37620386 | MS.gene97045:CDS |
ATGCTTCATGAACATGGAAG+GGG | 0.592915 | 2.2:-37620385 | MS.gene97045:CDS |
TCTTGGATAGCATTCCTCAA+AGG | 0.601149 | 2.2:-37620260 | MS.gene97045:CDS |
AAGTGGACCAGTCAAGATGA+AGG | 0.603388 | 2.2:-37619706 | MS.gene97045:CDS |
CAGAAATGGGACGTGCTCGT+GGG | 0.609001 | 2.2:-37620755 | None:intergenic |
AAGATGCAACTTTGGAGGAG+GGG | 0.609694 | 2.2:-37619606 | MS.gene97045:CDS |
GTTTCGTCGACTAACCAACT+TGG | 0.615554 | 2.2:-37619865 | MS.gene97045:CDS |
CACAAGATTCGACAATTGTA+CGG | 0.618314 | 2.2:-37620566 | MS.gene97045:CDS |
TGATGAAAATGTATCCAACT+TGG | 0.619935 | 2.2:-37620413 | MS.gene97045:CDS |
TAACCAACTTGGTGAAGGTG+TGG | 0.620796 | 2.2:-37619854 | MS.gene97045:CDS |
CGTACAATTGTCGAATCTTG+TGG | 0.622061 | 2.2:+37620567 | None:intergenic |
ACATTCAAGATGATAGAGCT+CGG | 0.622638 | 2.2:-37620716 | MS.gene97045:CDS |
GCTGAACCTAGAGAATGGAC+TGG | 0.629743 | 2.2:-37620156 | MS.gene97045:CDS |
TCGACTAACCAACTTGGTGA+AGG | 0.633986 | 2.2:-37619859 | MS.gene97045:CDS |
AAACTAACAGGAGACTTCAA+AGG | 0.635174 | 2.2:+37619895 | None:intergenic |
TGGTCAACTTGGTGAACATG+AGG | 0.636156 | 2.2:-37620136 | MS.gene97045:CDS |
GTGATGATGATACTATGAAG+TGG | 0.657295 | 2.2:-37619723 | MS.gene97045:CDS |
TGGTTAGTCGACGAAACAGG+AGG | 0.703043 | 2.2:+37619871 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
! | CAATCAGAGAAACAATAATT+TGG | - | chr2.2:37619623-37619642 | MS.gene97045:CDS | 25.0% |
! | TCAAATTCAAACCAATTTGA+GGG | - | chr2.2:37620347-37620366 | MS.gene97045:CDS | 25.0% |
! | TTAGATATATATTGCCTTTG+AGG | + | chr2.2:37620062-37620081 | None:intergenic | 25.0% |
! | TTCAAATTCAAACCAATTTG+AGG | - | chr2.2:37620346-37620365 | MS.gene97045:CDS | 25.0% |
! | TTGATTGTATATGATGGTTA+TGG | - | chr2.2:37619693-37619712 | MS.gene97045:CDS | 25.0% |
!! | TTCTTCATTTTGTGACAAAA+AGG | + | chr2.2:37620681-37620700 | None:intergenic | 25.0% |
!! | TTTTGCAAACAAGATAAAGA+AGG | - | chr2.2:37619833-37619852 | MS.gene97045:CDS | 25.0% |
!!! | CAAATTGGTTTGAATTTGAA+GGG | + | chr2.2:37620346-37620365 | None:intergenic | 25.0% |
!!! | TCAAATTGGTTTGAATTTGA+AGG | + | chr2.2:37620347-37620366 | None:intergenic | 25.0% |
!!! | TCTGATTTTTCTAGAAAGTT+TGG | - | chr2.2:37619657-37619676 | MS.gene97045:CDS | 25.0% |
AAATGAAGAAGATGCAACTT+TGG | - | chr2.2:37620691-37620710 | MS.gene97045:CDS | 30.0% | |
AGATTCAAGCTTGCAATAAA+AGG | - | chr2.2:37619979-37619998 | MS.gene97045:CDS | 30.0% | |
CAAAGTGAAACTAACCAATT+CGG | - | chr2.2:37620098-37620117 | MS.gene97045:CDS | 30.0% | |
GAACAACTCAAAACTTTCAT+TGG | - | chr2.2:37619942-37619961 | MS.gene97045:CDS | 30.0% | |
TACAAAGATCTTTGATGTGA+AGG | - | chr2.2:37619806-37619825 | MS.gene97045:CDS | 30.0% | |
TGATGAAAATGTATCCAACT+TGG | - | chr2.2:37619892-37619911 | MS.gene97045:CDS | 30.0% | |
! | AAGTGATGAAACTAGTTTCT+TGG | - | chr2.2:37620028-37620047 | MS.gene97045:CDS | 30.0% |
! | ATGAGTAACAATCCAGATTT+TGG | - | chr2.2:37620722-37620741 | MS.gene97045:CDS | 30.0% |
! | GAGGAGTTGAATAATTTTGT+GGG | - | chr2.2:37620188-37620207 | MS.gene97045:CDS | 30.0% |
! | TGAGGAGTTGAATAATTTTG+TGG | - | chr2.2:37620187-37620206 | MS.gene97045:CDS | 30.0% |
AAACTAACAGGAGACTTCAA+AGG | + | chr2.2:37620413-37620432 | None:intergenic | 35.0% | |
ACATTCAAGATGATAGAGCT+CGG | - | chr2.2:37619589-37619608 | MS.gene97045:CDS | 35.0% | |
ACTTCACAAATTCACCGAAT+TGG | + | chr2.2:37620115-37620134 | None:intergenic | 35.0% | |
ACTTGATGGAATTGGTGAAA+TGG | - | chr2.2:37620238-37620257 | MS.gene97045:CDS | 35.0% | |
ACTTTCATTGGCATTCTAGA+TGG | - | chr2.2:37619954-37619973 | MS.gene97045:CDS | 35.0% | |
AGACTTCAAAGGATCATAGA+TGG | + | chr2.2:37620402-37620421 | None:intergenic | 35.0% | |
ATACGAGCAACAAAAGATTG+AGG | - | chr2.2:37619776-37619795 | MS.gene97045:CDS | 35.0% | |
ATCATGTTGATGTGCAACAA+AGG | - | chr2.2:37620270-37620289 | MS.gene97045:CDS | 35.0% | |
CACAAGATTCGACAATTGTA+CGG | - | chr2.2:37619739-37619758 | MS.gene97045:CDS | 35.0% | |
CTTGCTAAACTTGATGGAAT+TGG | - | chr2.2:37620230-37620249 | MS.gene97045:CDS | 35.0% | |
GACTTCAAAGGATCATAGAT+GGG | + | chr2.2:37620401-37620420 | None:intergenic | 35.0% | |
GCTTGCTTGATTGTATATGA+TGG | - | chr2.2:37619687-37619706 | MS.gene97045:CDS | 35.0% | |
GTATATGATGGTTATGGTGA+TGG | - | chr2.2:37619699-37619718 | MS.gene97045:CDS | 35.0% | |
TACGAGCAACAAAAGATTGA+GGG | - | chr2.2:37619777-37619796 | MS.gene97045:CDS | 35.0% | |
TCATGTTGATGTGCAACAAA+GGG | - | chr2.2:37620271-37620290 | MS.gene97045:CDS | 35.0% | |
TGTGAAGTTGGATGATGAAA+TGG | - | chr2.2:37620127-37620146 | MS.gene97045:CDS | 35.0% | |
TGTGGAGTTTAAGGATCTAA+TGG | - | chr2.2:37620469-37620488 | MS.gene97045:CDS | 35.0% | |
! | ATTCGGTGAATTTGTGAAGT+TGG | - | chr2.2:37620115-37620134 | MS.gene97045:CDS | 35.0% |
! | CACTTTGGAAATCTCAGTTT+CGG | + | chr2.2:37619859-37619878 | None:intergenic | 35.0% |
! | GTGATGATGATACTATGAAG+TGG | - | chr2.2:37620582-37620601 | MS.gene97045:CDS | 35.0% |
! | TCACCATCATCTAGTTTACT+AGG | + | chr2.2:37620566-37620585 | None:intergenic | 35.0% |
!!! | TTGCTCGTATTTTTCAAGCA+TGG | + | chr2.2:37619766-37619785 | None:intergenic | 35.0% |
AAATGGCTGAACCTAGAGAA+TGG | - | chr2.2:37620144-37620163 | MS.gene97045:CDS | 40.0% | |
ATGCTTCATGAACATGGAAG+GGG | - | chr2.2:37619920-37619939 | MS.gene97045:CDS | 40.0% | |
CACAATCTCTTTGTGCACTT+TGG | + | chr2.2:37619874-37619893 | None:intergenic | 40.0% | |
CATGCTTCATGAACATGGAA+GGG | - | chr2.2:37619919-37619938 | MS.gene97045:CDS | 40.0% | |
CGTACAATTGTCGAATCTTG+TGG | + | chr2.2:37619741-37619760 | None:intergenic | 40.0% | |
CTTCCATGTTCATGAAGCAT+GGG | + | chr2.2:37619920-37619939 | None:intergenic | 40.0% | |
GAGAATTGGCTGATCAAGAA+TGG | - | chr2.2:37620501-37620520 | MS.gene97045:CDS | 40.0% | |
GCTCCTAGTAAACTAGATGA+TGG | - | chr2.2:37620560-37620579 | MS.gene97045:CDS | 40.0% | |
GTCAAGATGATGTGTTTGCA+TGG | - | chr2.2:37620645-37620664 | MS.gene97045:CDS | 40.0% | |
TCTTGGATAGCATTCCTCAA+AGG | - | chr2.2:37620045-37620064 | MS.gene97045:CDS | 40.0% | |
TGAAGAAGATGCAACTTTGG+AGG | - | chr2.2:37620694-37620713 | MS.gene97045:CDS | 40.0% | |
TTAGCAAGCCATTCTTGAAC+AGG | + | chr2.2:37620218-37620237 | None:intergenic | 40.0% | |
TTCATCACCTTCATCTTGAC+TGG | + | chr2.2:37620609-37620628 | None:intergenic | 40.0% | |
! | TGCATGATGGCTTTTACCAA+TGG | - | chr2.2:37620372-37620391 | MS.gene97045:CDS | 40.0% |
!! | GAATGGCTTGCTAAACTTGA+TGG | - | chr2.2:37620224-37620243 | MS.gene97045:CDS | 40.0% |
!! | GGAAGAGAGTTTTGTCAGTA+CGG | + | chr2.2:37620748-37620767 | None:intergenic | 40.0% |
AAGGATCTAATGGCTGAACC+TGG | - | chr2.2:37620479-37620498 | MS.gene97045:CDS | 45.0% | |
AAGTGGACCAGTCAAGATGA+AGG | - | chr2.2:37620599-37620618 | MS.gene97045:CDS | 45.0% | |
AATGGCTGAACCTGGAGAAT+TGG | - | chr2.2:37620487-37620506 | MS.gene97045:CDS | 45.0% | |
AGTTGACCAGTCCATTCTCT+AGG | + | chr2.2:37620158-37620177 | None:intergenic | 45.0% | |
CATCATGCATGCCCTCAAAT+TGG | + | chr2.2:37620361-37620380 | None:intergenic | 45.0% | |
CCATGCTTCATGAACATGGA+AGG | - | chr2.2:37619918-37619937 | MS.gene97045:CDS | 45.0% | |
CCTTCCATGTTCATGAAGCA+TGG | + | chr2.2:37619921-37619940 | None:intergenic | 45.0% | |
GAAACAGGAGGCAAACTAAC+AGG | + | chr2.2:37620425-37620444 | None:intergenic | 45.0% | |
GAATCTTGTGGCGTAGTCAT+TGG | + | chr2.2:37619729-37619748 | None:intergenic | 45.0% | |
TCTTGATCAGCCAATTCTCC+AGG | + | chr2.2:37620500-37620519 | None:intergenic | 45.0% | |
TGGGCAAACCTGTTCAAGAA+TGG | - | chr2.2:37620207-37620226 | MS.gene97045:CDS | 45.0% | |
TTGTCAGTACGGCCAAAATC+TGG | + | chr2.2:37620737-37620756 | None:intergenic | 45.0% | |
! | AAGATGCAACTTTGGAGGAG+GGG | - | chr2.2:37620699-37620718 | MS.gene97045:CDS | 45.0% |
! | AGAAGATGCAACTTTGGAGG+AGG | - | chr2.2:37620697-37620716 | MS.gene97045:CDS | 45.0% |
! | AGTTGGTTAGTCGACGAAAC+AGG | + | chr2.2:37620440-37620459 | None:intergenic | 45.0% |
! | CAATTTGAGGGCATGCATGA+TGG | - | chr2.2:37620359-37620378 | MS.gene97045:CDS | 45.0% |
! | GAAGATGCAACTTTGGAGGA+GGG | - | chr2.2:37620698-37620717 | MS.gene97045:CDS | 45.0% |
! | GTTTCGTCGACTAACCAACT+TGG | - | chr2.2:37620440-37620459 | MS.gene97045:CDS | 45.0% |
! | TAACCAACTTGGTGAAGGTG+TGG | - | chr2.2:37620451-37620470 | MS.gene97045:CDS | 45.0% |
! | TCGACTAACCAACTTGGTGA+AGG | - | chr2.2:37620446-37620465 | MS.gene97045:CDS | 45.0% |
! | TGGTCAACTTGGTGAACATG+AGG | - | chr2.2:37620169-37620188 | MS.gene97045:CDS | 45.0% |
! | TGGTGAAGGTGTGGAGTTTA+AGG | - | chr2.2:37620460-37620479 | MS.gene97045:CDS | 45.0% |
!! | AGAGAATGGACTGGTCAACT+TGG | - | chr2.2:37620158-37620177 | MS.gene97045:CDS | 45.0% |
!! | GATCATAGATGGGTTGCCAT+TGG | + | chr2.2:37620391-37620410 | None:intergenic | 45.0% |
ACTCCACACCTTCACCAAGT+TGG | + | chr2.2:37620457-37620476 | None:intergenic | 50.0% | |
ATGAAGCATGGGTGCCAAGT+TGG | + | chr2.2:37619909-37619928 | None:intergenic | 50.0% | |
GCACCCATGCTTCATGAACA+TGG | - | chr2.2:37619914-37619933 | MS.gene97045:CDS | 50.0% | |
GCTGAACCTAGAGAATGGAC+TGG | - | chr2.2:37620149-37620168 | MS.gene97045:CDS | 50.0% | |
! | TGGTTAGTCGACGAAACAGG+AGG | + | chr2.2:37620437-37620456 | None:intergenic | 50.0% |
CACTGCTCACACACAACGCA+TGG | - | chr2.2:37620313-37620332 | MS.gene97045:CDS | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.2 | gene | 37619555 | 37620772 | 37619555 | ID=MS.gene97045 |
chr2.2 | mRNA | 37619555 | 37620772 | 37619555 | ID=MS.gene97045.t1;Parent=MS.gene97045 |
chr2.2 | exon | 37619555 | 37620772 | 37619555 | ID=MS.gene97045.t1.exon1;Parent=MS.gene97045.t1 |
chr2.2 | CDS | 37619555 | 37620772 | 37619555 | ID=cds.MS.gene97045.t1;Parent=MS.gene97045.t1 |
Gene Sequence |
Protein sequence |