AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene97065

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene97065.t1 MTR_4g033295 95.028 181 6 2 1 179 1 180 2.66e-124 349
MS.gene97065.t1 MTR_4g033295 95.556 180 5 2 1 178 1 179 4.35e-124 348
MS.gene97065.t1 MTR_4g033295 94.904 157 5 2 1 155 1 156 2.65e-105 301
MS.gene97065.t1 MTR_4g065870 82.090 67 12 0 112 178 350 416 4.22e-32 120
MS.gene97065.t1 MTR_4g065870 75.000 76 17 1 105 178 341 416 4.94e-32 120
MS.gene97065.t1 MTR_3g028520 75.000 76 17 1 105 178 308 383 1.25e-31 119
MS.gene97065.t1 MTR_3g027650 75.000 76 17 1 105 178 308 383 1.25e-31 119
MS.gene97065.t1 MTR_3g027650 75.000 76 17 1 105 178 308 383 1.29e-31 119
MS.gene97065.t1 MTR_1g052470 70.513 78 21 1 103 178 282 359 1.83e-31 118
MS.gene97065.t1 MTR_8g036235 71.053 76 20 1 105 178 302 377 5.75e-30 114
MS.gene97065.t1 MTR_2g098310 73.684 76 18 1 105 178 318 393 1.53e-29 113
MS.gene97065.t1 MTR_2g098310 73.684 76 18 1 105 178 318 393 2.14e-29 113
MS.gene97065.t1 MTR_7g092540 69.737 76 21 1 105 178 229 304 4.37e-29 110
MS.gene97065.t1 MTR_7g092540 69.737 76 21 1 105 178 229 304 6.40e-29 110
MS.gene97065.t1 MTR_1g116790 63.750 80 29 0 99 178 247 326 8.87e-29 110
MS.gene97065.t1 MTR_2g098310 50.450 111 18 2 105 178 318 428 8.49e-23 95.1
MS.gene97065.t1 MTR_3g027650 81.132 53 8 1 105 155 308 360 1.03e-21 91.7
MS.gene97065.t1 MTR_8g036235 77.358 53 10 1 105 155 302 354 4.34e-20 87.4
MS.gene97065.t1 MTR_4g065870 77.358 53 10 1 105 155 341 393 4.65e-20 87.4
MS.gene97065.t1 MTR_2g098310 77.358 53 10 1 105 155 318 370 4.45e-19 84.7
MS.gene97065.t1 MTR_4g131160 61.905 63 23 1 116 178 198 259 3.16e-18 82.0
MS.gene97065.t1 MTR_4g131160 61.905 63 23 1 116 178 195 256 3.28e-18 82.0
MS.gene97065.t1 MTR_3g498825 59.677 62 25 0 117 178 147 208 4.87e-17 78.2
MS.gene97065.t1 MTR_1g080890 58.730 63 25 1 116 178 192 253 2.22e-16 76.6
MS.gene97065.t1 MTR_1g017350 58.065 62 26 0 117 178 260 321 6.68e-16 75.5
MS.gene97065.t1 MTR_1g017350 58.065 62 26 0 117 178 260 321 6.84e-16 75.5
MS.gene97065.t1 MTR_1g017350 58.065 62 26 0 117 178 260 321 6.87e-16 75.5
MS.gene97065.t1 MTR_1g017350 58.065 62 26 0 117 178 260 321 7.02e-16 75.5
MS.gene97065.t1 MTR_5g048860 56.452 62 27 0 117 178 365 426 8.03e-15 72.8
MS.gene97065.t1 MTR_8g065740 54.839 62 28 0 117 178 305 366 8.85e-15 72.4
MS.gene97065.t1 MTR_8g099880 54.839 62 28 0 117 178 145 206 9.23e-15 72.0
MS.gene97065.t1 MTR_6g052280 72.727 44 12 0 112 155 49 92 1.03e-14 68.2
MS.gene97065.t1 MTR_3g116770 54.839 62 28 0 117 178 191 252 1.47e-14 71.6
MS.gene97065.t1 MTR_8g012290 44.444 90 50 0 117 206 291 380 1.49e-14 72.0
MS.gene97065.t1 MTR_3g116770 54.839 62 28 0 117 178 191 252 1.49e-14 71.6
MS.gene97065.t1 MTR_8g012290 44.444 90 50 0 117 206 291 380 1.50e-14 72.0
MS.gene97065.t1 MTR_7g053410 54.839 62 28 0 117 178 317 378 1.56e-14 72.0
MS.gene97065.t1 MTR_7g053410 54.839 62 28 0 117 178 317 378 1.58e-14 71.6
MS.gene97065.t1 MTR_4g070320 53.226 62 29 0 117 178 143 204 9.80e-14 68.9
MS.gene97065.t1 MTR_1g018090 57.143 63 26 1 116 178 273 334 3.16e-13 67.8
MS.gene97065.t1 MTR_8g062240 48.387 62 32 0 117 178 151 212 1.84e-12 65.1
MS.gene97065.t1 MTR_5g037250 46.774 62 33 0 117 178 112 173 3.86e-12 63.5
MS.gene97065.t1 MTR_3g103030 52.381 63 29 1 116 178 228 289 4.34e-12 64.3
MS.gene97065.t1 MTR_5g005110 45.977 87 41 3 92 178 204 284 5.00e-12 63.9
MS.gene97065.t1 MTR_7g092510 48.387 62 32 0 117 178 173 234 1.77e-11 62.4
MS.gene97065.t1 MTR_1g070870 54.321 81 32 2 116 192 119 198 4.49e-11 61.2
MS.gene97065.t1 MTR_1g070870 54.321 81 32 2 116 192 122 201 4.85e-11 60.8
MS.gene97065.t1 MTR_1g059270 45.161 62 34 0 117 178 160 221 9.83e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene97065.t1 AT1G35460 42.601 223 68 6 11 178 25 242 5.44e-41 140
MS.gene97065.t1 AT4G09180 45.304 181 64 4 10 179 90 246 5.95e-36 127
MS.gene97065.t1 AT2G42280 80.000 70 14 0 109 178 271 340 9.26e-32 118
MS.gene97065.t1 AT2G42280 80.000 70 14 0 109 178 271 340 1.00e-31 118
MS.gene97065.t1 AT1G51140 71.622 74 21 0 105 178 292 365 1.77e-31 118
MS.gene97065.t1 AT2G43140 73.239 71 19 0 108 178 125 195 3.77e-30 110
MS.gene97065.t1 AT2G43140 73.239 71 19 0 108 178 222 292 1.77e-29 111
MS.gene97065.t1 AT1G05805 65.385 78 24 1 105 179 268 345 6.28e-28 108
MS.gene97065.t1 AT1G35460 39.000 200 62 6 11 155 25 219 6.93e-28 105
MS.gene97065.t1 AT2G24260 63.492 63 22 1 116 178 34 95 4.35e-19 82.8
MS.gene97065.t1 AT2G24260 63.492 63 22 1 116 178 137 198 2.24e-18 82.4
MS.gene97065.t1 AT4G30980 61.905 63 23 1 116 178 129 190 3.21e-18 81.3
MS.gene97065.t1 AT4G30980 61.905 63 23 1 116 178 177 238 5.94e-18 81.3
MS.gene97065.t1 AT5G58010 51.899 79 33 2 116 190 98 175 6.23e-18 80.5
MS.gene97065.t1 AT4G34530 51.163 86 39 1 104 189 159 241 1.08e-16 77.4
MS.gene97065.t1 AT5G50915 58.065 62 26 0 117 178 136 197 5.71e-16 74.7
MS.gene97065.t1 AT5G50915 58.065 62 26 0 117 178 136 197 5.71e-16 74.7
MS.gene97065.t1 AT5G50915 58.065 62 26 0 117 178 136 197 7.82e-16 74.3
MS.gene97065.t1 AT5G50915 58.065 62 26 0 117 178 136 197 7.82e-16 74.3
MS.gene97065.t1 AT1G10120 58.065 62 26 0 117 178 206 267 2.34e-15 73.9
MS.gene97065.t1 AT1G10120 58.065 62 26 0 117 178 206 267 2.34e-15 73.9
MS.gene97065.t1 AT1G26260 52.055 73 33 1 106 178 192 262 2.51e-15 73.9
MS.gene97065.t1 AT1G26260 52.055 73 33 1 106 178 163 233 2.80e-15 73.6
MS.gene97065.t1 AT1G26260 52.055 73 33 1 106 178 214 284 3.16e-15 73.6
MS.gene97065.t1 AT1G26260 52.055 73 33 1 106 178 214 284 3.16e-15 73.6
MS.gene97065.t1 AT1G26260 52.055 73 33 1 106 178 214 284 3.16e-15 73.6
MS.gene97065.t1 AT1G26260 52.055 73 33 1 106 178 214 284 3.16e-15 73.6
MS.gene97065.t1 AT1G18400 53.226 62 29 0 117 178 145 206 1.04e-14 70.9
MS.gene97065.t1 AT1G68920 54.839 62 28 0 117 178 302 363 1.22e-14 72.0
MS.gene97065.t1 AT1G68920 54.839 62 28 0 117 178 303 364 1.28e-14 72.0
MS.gene97065.t1 AT1G68920 54.839 62 28 0 117 178 303 364 1.28e-14 72.0
MS.gene97065.t1 AT1G68920 54.839 62 28 0 117 178 303 364 1.28e-14 72.0
MS.gene97065.t1 AT1G18400 53.226 62 29 0 117 178 145 206 1.41e-14 70.9
MS.gene97065.t1 AT3G07340 54.839 62 28 0 117 178 258 319 2.26e-14 71.2
MS.gene97065.t1 AT1G73830 53.226 62 29 0 117 178 147 208 2.35e-14 70.1
MS.gene97065.t1 AT3G07340 54.839 62 28 0 117 178 258 319 2.38e-14 71.2
MS.gene97065.t1 AT1G73830 53.226 62 29 0 117 178 147 208 2.53e-14 70.1
MS.gene97065.t1 AT1G25330 54.839 62 28 0 117 178 104 165 5.39e-14 68.6
MS.gene97065.t1 AT5G48560 53.226 62 29 0 117 178 301 362 8.96e-14 69.7
MS.gene97065.t1 AT5G48560 53.226 62 29 0 117 178 301 362 9.57e-14 69.7
MS.gene97065.t1 AT2G14760 57.143 63 26 1 116 178 236 297 2.82e-13 67.8
MS.gene97065.t1 AT2G18300 47.945 73 35 1 117 189 185 254 3.31e-13 67.4
MS.gene97065.t1 AT2G18300 47.945 73 35 1 117 189 185 254 3.41e-13 67.4
MS.gene97065.t1 AT4G33880 57.143 63 26 1 116 178 265 326 3.78e-13 67.4
MS.gene97065.t1 AT2G18300 47.945 73 35 1 117 189 185 254 3.87e-13 67.4
MS.gene97065.t1 AT5G43175 50.746 67 32 1 112 178 127 192 5.61e-13 65.9
MS.gene97065.t1 AT3G23690 51.613 62 30 0 117 178 191 252 5.65e-13 67.0
MS.gene97065.t1 AT1G27740 52.239 67 31 1 112 178 162 227 5.91e-13 66.2
MS.gene97065.t1 AT4G36540 50.000 62 31 0 117 178 141 202 9.77e-13 65.9
MS.gene97065.t1 AT4G36540 50.000 62 31 0 117 178 141 202 1.03e-12 65.9
MS.gene97065.t1 AT3G57800 51.613 62 30 0 117 178 204 265 1.93e-12 65.5
MS.gene97065.t1 AT2G42300 51.613 62 30 0 117 178 185 246 1.98e-12 64.7
MS.gene97065.t1 AT2G42300 50.000 64 32 0 115 178 183 246 2.03e-12 65.1
MS.gene97065.t1 AT1G59640 48.387 62 32 0 117 178 136 197 3.01e-12 64.3
MS.gene97065.t1 AT1G59640 48.387 62 32 0 117 178 136 197 4.27e-12 64.3
MS.gene97065.t1 AT5G62610 43.548 62 35 0 117 178 153 214 9.60e-11 60.1
MS.gene97065.t1 AT5G62610 43.548 62 35 0 117 178 153 214 9.60e-11 60.1

Find 42 sgRNAs with CRISPR-Local

Find 312 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTAGGGATGCAACCTGTTTC+TGG 0.121390 4.4:+70152495 None:intergenic
AGCTAAACCTTATCCATATT+TGG 0.165931 4.4:-70154323 None:intergenic
TCAAGAACTTGTGCCAAATA+TGG 0.285178 4.4:+70154310 MS.gene97065:CDS
CATAGCAATTGACCTTAAAA+TGG 0.333387 4.4:+70154053 MS.gene97065:CDS
GAGTAATAATCAGATAAATA+TGG 0.336738 4.4:-70152702 None:intergenic
CCTGTTTCTGGCGGTGGTGG+TGG 0.399011 4.4:+70152507 MS.gene97065:CDS
TCTAATAACAACGTTGCTGC+TGG 0.406148 4.4:+70152651 MS.gene97065:CDS
CCACCACCACCGCCAGAAAC+AGG 0.428262 4.4:-70152507 None:intergenic
ACTTGTGCCAAATATGGATA+AGG 0.429118 4.4:+70154316 MS.gene97065:CDS
GTTTCTGGCGGTGGTGGTGG+TGG 0.448404 4.4:+70152510 MS.gene97065:CDS
TCCAAGGAGTATTGCTGAAA+GGG 0.458068 4.4:+70154137 MS.gene97065:CDS
ACCCTTTCAGCAATACTCCT+TGG 0.458639 4.4:-70154138 None:intergenic
ATGCAACCTGTTTCTGGCGG+TGG 0.482597 4.4:+70152501 MS.gene97065:CDS
CAACCTGTTTCTGGCGGTGG+TGG 0.488753 4.4:+70152504 MS.gene97065:CDS
GTGGTGGTGGTGGTTTGACA+CGG 0.498165 4.4:+70152520 MS.gene97065:CDS
GGATGAGACTCAGGAGTTGA+AGG 0.519475 4.4:-70152681 None:intergenic
GAGGAGAACCGAATAAAAGA+TGG 0.520509 4.4:-70157321 None:intergenic
GATAAATATGGATGAGACTC+AGG 0.521953 4.4:-70152690 None:intergenic
GTTTCTACAGAATCAAATTG+AGG 0.522450 4.4:+70156579 MS.gene97065:CDS
TTGACAGATGTAGGAGTAAG+TGG 0.525544 4.4:-70152729 None:intergenic
CGCTTTGCTCGAATCTTACA+CGG 0.531001 4.4:-70154099 None:intergenic
TTAGCAACATTGACAGATGT+AGG 0.531316 4.4:-70152738 None:intergenic
AACGATTCGAACCAACTCGC+TGG 0.532231 4.4:-70152555 None:intergenic
AAGTAAAGTACCTGAGTGAA+AGG 0.536445 4.4:-70152765 None:intergenic
AACAACGTTGCTGCTGGACA+TGG 0.544808 4.4:+70152657 MS.gene97065:CDS
CGCAGAGATGTTAGATGAGG+CGG 0.558021 4.4:+70156543 MS.gene97065:CDS
ATCCAAGGAGTATTGCTGAA+AGG 0.558668 4.4:+70154136 MS.gene97065:CDS
CGTTTCTACTCAATCCGATC+CGG 0.571659 4.4:-70157273 None:intergenic
TGCTAATAATCCTTTCACTC+AGG 0.579907 4.4:+70152755 MS.gene97065:CDS
TGTAAGATTCGAGCAAAGCG+TGG 0.594947 4.4:+70154102 MS.gene97065:CDS
GTTCTCCTCAACGTTTCAAG+AGG 0.598071 4.4:+70157335 MS.gene97065:CDS
TGTGTGTTTAAAGGGAGTTG+AGG 0.598349 4.4:+70154023 MS.gene97065:intron
TTAACTCAACTCCAGCGAGT+TGG 0.603459 4.4:+70152544 MS.gene97065:CDS
TATAATGGCTAGCACCGGAT+CGG 0.604984 4.4:+70157259 MS.gene97065:intron
GATCACGAGTGTCGCACGAA+CGG 0.609866 4.4:-70157299 None:intergenic
TTGTTGTTATGTAGGTTCGG+AGG 0.614896 4.4:+70154258 MS.gene97065:intron
GTGGATTTGCTACTCATCCA+AGG 0.634120 4.4:+70154121 MS.gene97065:CDS
GGGATGCAACCTGTTTCTGG+CGG 0.639831 4.4:+70152498 None:intergenic
GGTTACCTCTTGAAACGTTG+AGG 0.644821 4.4:-70157340 None:intergenic
TACCGCAGAGATGTTAGATG+AGG 0.658172 4.4:+70156540 MS.gene97065:CDS
CGCCTCATCTAACATCTCTG+CGG 0.686528 4.4:-70156542 None:intergenic
TTAAAGGGAGTTGAGGACAG+TGG 0.694915 4.4:+70154030 MS.gene97065:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AACAAAATATCAATCAATTT+AGG + chr4.4:70153622-70153641 MS.gene97065:intron 15.0%
!! ACAACATAAATTAAATTTGA+AGG + chr4.4:70155528-70155547 MS.gene97065:intron 15.0%
!! ATCTATATAATATACTGATA+TGG + chr4.4:70153843-70153862 MS.gene97065:intron 15.0%
!! TATGTAATAAAAGAAAAGAA+AGG - chr4.4:70154488-70154507 None:intergenic 15.0%
!! TTGTTTAATATAAAATTCTG+AGG - chr4.4:70154881-70154900 None:intergenic 15.0%
!!! AAATAGAACATTTAAAATAG+TGG - chr4.4:70153666-70153685 None:intergenic 15.0%
!!! AAATTTAGAAAGTACTAATT+GGG + chr4.4:70154715-70154734 MS.gene97065:intron 15.0%
!!! ACTTTGTTTTTCATTTATTT+CGG - chr4.4:70157189-70157208 None:intergenic 15.0%
!!! CTTTTGAATTATCATATTTT+TGG + chr4.4:70156786-70156805 MS.gene97065:intron 15.0%
!! AACAAAAGATAAATAAAGTC+AGG - chr4.4:70155814-70155833 None:intergenic 20.0%
!! AATTATTGACATAATGACAT+TGG + chr4.4:70154682-70154701 MS.gene97065:intron 20.0%
!! ACAAAAGATAAATAAAGTCA+GGG - chr4.4:70155813-70155832 None:intergenic 20.0%
!! ACTATAACATGTTTGTTTAA+TGG + chr4.4:70154360-70154379 MS.gene97065:intron 20.0%
!! ATATTAACATGTGATTTGAT+TGG + chr4.4:70153267-70153286 MS.gene97065:intron 20.0%
!! ATTAAACAAACATGTTATAG+TGG - chr4.4:70154361-70154380 None:intergenic 20.0%
!! ATTCTTTAGATTATAAGTGT+TGG + chr4.4:70153547-70153566 MS.gene97065:intron 20.0%
!! CATAATGCTAATACTAATTT+GGG + chr4.4:70154177-70154196 MS.gene97065:intron 20.0%
!! GAGTAATAATCAGATAAATA+TGG - chr4.4:70152705-70152724 None:intergenic 20.0%
!! TATATAATATACTGATATGG+AGG + chr4.4:70153846-70153865 MS.gene97065:intron 20.0%
!! TATCAAAAATCATAAATGTG+AGG + chr4.4:70155230-70155249 MS.gene97065:intron 20.0%
!! TCATAATGCTAATACTAATT+TGG + chr4.4:70154176-70154195 MS.gene97065:intron 20.0%
!! TTCAATGTAATTATATGTGT+CGG - chr4.4:70152936-70152955 None:intergenic 20.0%
!!! AAAATGGACAAAATTTTAGA+GGG + chr4.4:70154069-70154088 MS.gene97065:CDS 20.0%
!!! AAATTTTATCATCTATATGG+CGG - chr4.4:70157085-70157104 None:intergenic 20.0%
!!! AATTTAGAAAGTACTAATTG+GGG + chr4.4:70154716-70154735 MS.gene97065:intron 20.0%
!!! ACCTGAATAAAAAGTATAAA+AGG - chr4.4:70155144-70155163 None:intergenic 20.0%
!!! AGATAAATCTTTCACATTTT+TGG + chr4.4:70155430-70155449 MS.gene97065:intron 20.0%
!!! AGATGATAAAATTTTGCATT+AGG + chr4.4:70157091-70157110 MS.gene97065:intron 20.0%
!!! ATTTAATTTGTATACGTCAT+TGG + chr4.4:70153163-70153182 MS.gene97065:intron 20.0%
!!! ATTTTCTACTATTGACATAT+TGG + chr4.4:70157143-70157162 MS.gene97065:intron 20.0%
!!! ATTTTTAGTAACGTTTTAGT+AGG + chr4.4:70153227-70153246 MS.gene97065:intron 20.0%
!!! CAAATTTAGAAAGTACTAAT+TGG + chr4.4:70154714-70154733 MS.gene97065:intron 20.0%
!!! CCTGAATAAAAAGTATAAAA+GGG - chr4.4:70155143-70155162 None:intergenic 20.0%
!!! CTAAAATTTTGTCCATTTTA+AGG - chr4.4:70154068-70154087 None:intergenic 20.0%
!!! CTGAATAAAAAGTATAAAAG+GGG - chr4.4:70155142-70155161 None:intergenic 20.0%
!!! CTTTTCTTTTATTACATATG+AGG + chr4.4:70154490-70154509 MS.gene97065:intron 20.0%
!!! GATAAATCTTTCACATTTTT+GGG + chr4.4:70155431-70155450 MS.gene97065:intron 20.0%
!!! GATGATAAAATTTTGCATTA+GGG + chr4.4:70157092-70157111 MS.gene97065:intron 20.0%
!!! GCAAAATTTTATCATCTATA+TGG - chr4.4:70157088-70157107 None:intergenic 20.0%
!!! TAAAATGGACAAAATTTTAG+AGG + chr4.4:70154068-70154087 MS.gene97065:CDS 20.0%
!!! TGTATTTTTGTGTGTTTAAA+GGG + chr4.4:70154015-70154034 MS.gene97065:intron 20.0%
!!! TTCTGTATATGAATATCTTT+TGG - chr4.4:70153804-70153823 None:intergenic 20.0%
!!! TTTTGTTCTTATTGCTTATT+GGG + chr4.4:70153959-70153978 MS.gene97065:intron 20.0%
!!! TTTTTGTTCTTATTGCTTAT+TGG + chr4.4:70153958-70153977 MS.gene97065:intron 20.0%
! AAAACTATGTTATACACACT+GGG - chr4.4:70153466-70153485 None:intergenic 25.0%
! AACTTCAAATTCAAAGAGAA+AGG - chr4.4:70154662-70154681 None:intergenic 25.0%
! AACTTGAACAAAATCATTTC+TGG - chr4.4:70154396-70154415 None:intergenic 25.0%
! AATACAAAATCATCCTCATT+TGG - chr4.4:70155614-70155633 None:intergenic 25.0%
! ACTATTAATTTCTTCTTTGG+CGG + chr4.4:70156128-70156147 MS.gene97065:intron 25.0%
! ACTTCAAATTCAAAGAGAAA+GGG - chr4.4:70154661-70154680 None:intergenic 25.0%
! ACTTGAACAAAATCATTTCT+GGG - chr4.4:70154395-70154414 None:intergenic 25.0%
! ATACAAAATCATCCTCATTT+GGG - chr4.4:70155613-70155632 None:intergenic 25.0%
! ATAGATAAATCAAGCAAATC+CGG - chr4.4:70152816-70152835 None:intergenic 25.0%
! ATTCCTCATGAAATTGATAA+TGG - chr4.4:70156890-70156909 None:intergenic 25.0%
! CAAAAGATAAATAAAGTCAG+GGG - chr4.4:70155812-70155831 None:intergenic 25.0%
! CTAAATTTATGCTTGTCATT+TGG + chr4.4:70156619-70156638 MS.gene97065:intron 25.0%
! GACACTATTAATTTCTTCTT+TGG + chr4.4:70156125-70156144 MS.gene97065:intron 25.0%
! GCATTTCTCTATCAAAATAT+AGG + chr4.4:70156228-70156247 MS.gene97065:intron 25.0%
! TAAAACTATGTTATACACAC+TGG - chr4.4:70153467-70153486 None:intergenic 25.0%
! TACAAGAACAAAAGAAACTT+AGG - chr4.4:70156511-70156530 None:intergenic 25.0%
! TACTTAGTGAGAAAATACTT+TGG + chr4.4:70153935-70153954 MS.gene97065:intron 25.0%
! TATCAAAATATAGGAGGATA+GGG + chr4.4:70156237-70156256 MS.gene97065:intron 25.0%
! TATCTACATGCTGATATATA+TGG - chr4.4:70153208-70153227 None:intergenic 25.0%
! TCTCAAATTATTAACGATGT+CGG + chr4.4:70152967-70152986 MS.gene97065:intron 25.0%
! TGAAAGAAATAGAGAACATT+GGG - chr4.4:70155670-70155689 None:intergenic 25.0%
! TGCATGAATTGATACATTAT+AGG + chr4.4:70156691-70156710 MS.gene97065:intron 25.0%
! TGGATACAATGTAACTAATA+TGG + chr4.4:70155762-70155781 MS.gene97065:intron 25.0%
! TTCAAAAGAGAATATGCAAA+CGG - chr4.4:70156774-70156793 None:intergenic 25.0%
! TTCATATACAGAAAGATGAT+AGG + chr4.4:70153811-70153830 MS.gene97065:intron 25.0%
! TTGATATCTCTCAATCATTA+AGG - chr4.4:70155216-70155235 None:intergenic 25.0%
! TTTCTCTATCAAAATATAGG+AGG + chr4.4:70156231-70156250 MS.gene97065:intron 25.0%
!! TTTGAGTAAAGGAACTTTTA+AGG - chr4.4:70154754-70154773 None:intergenic 25.0%
!!! AACATAGTTTTACAACTGTT+AGG + chr4.4:70153475-70153494 MS.gene97065:intron 25.0%
!!! AGTCATTTTTGTTAGAAGTT+AGG + chr4.4:70157119-70157138 MS.gene97065:intron 25.0%
!!! CCCTTTTATACTTTTTATTC+AGG + chr4.4:70155140-70155159 MS.gene97065:intron 25.0%
!!! CTGTATTTTTGTGTGTTTAA+AGG + chr4.4:70154014-70154033 MS.gene97065:intron 25.0%
AAAAGTCCAAACATGATGTT+TGG - chr4.4:70155286-70155305 None:intergenic 30.0%
AAAGTCCAAACATGATGTTT+GGG - chr4.4:70155285-70155304 None:intergenic 30.0%
AACGGAATTATGCATTTACT+CGG - chr4.4:70156756-70156775 None:intergenic 30.0%
AAGGTACAAAGCATAATGTA+TGG - chr4.4:70154427-70154446 None:intergenic 30.0%
AATACACAATACGGACAATA+CGG - chr4.4:70153004-70153023 None:intergenic 30.0%
ACTCTACAACAAATACATGT+TGG + chr4.4:70156858-70156877 MS.gene97065:intron 30.0%
AGCTAAACCTTATCCATATT+TGG - chr4.4:70154326-70154345 None:intergenic 30.0%
ATCGAATACATTCAAGTCTT+CGG + chr4.4:70153362-70153381 MS.gene97065:intron 30.0%
CAACTTAACTACAAATCCTT+AGG + chr4.4:70155109-70155128 MS.gene97065:intron 30.0%
CATAGCAATTGACCTTAAAA+TGG + chr4.4:70154053-70154072 MS.gene97065:CDS 30.0%
CTAAGGATTTGTAGTTAAGT+TGG - chr4.4:70155111-70155130 None:intergenic 30.0%
CTATCAAAATATAGGAGGAT+AGG + chr4.4:70156236-70156255 MS.gene97065:intron 30.0%
CTCTACAACAAATACATGTT+GGG + chr4.4:70156859-70156878 MS.gene97065:intron 30.0%
GAACTCAAAAATTGTATTGG+AGG - chr4.4:70155589-70155608 None:intergenic 30.0%
GAGTATAACAGAACATAATG+AGG + chr4.4:70153890-70153909 MS.gene97065:intron 30.0%
GATACTTGCTTCTCATATAA+TGG + chr4.4:70157244-70157263 MS.gene97065:intron 30.0%
GGAGAACTCAAAAATTGTAT+TGG - chr4.4:70155592-70155611 None:intergenic 30.0%
GTGAAAGAAATAGAGAACAT+TGG - chr4.4:70155671-70155690 None:intergenic 30.0%
GTTTCTACAGAATCAAATTG+AGG + chr4.4:70156579-70156598 MS.gene97065:CDS 30.0%
TAAAAGGGGATTAAAACCTA+AGG - chr4.4:70155128-70155147 None:intergenic 30.0%
TAAATTCAGCGTATACATTC+TGG - chr4.4:70155085-70155104 None:intergenic 30.0%
TCAAAAATTGTATTGGAGGA+GGG - chr4.4:70155585-70155604 None:intergenic 30.0%
TCATGTCTTTCGTTTCTAAA+AGG - chr4.4:70156075-70156094 None:intergenic 30.0%
TCATTTGCCTAATCCAAATT+GGG + chr4.4:70154210-70154229 MS.gene97065:intron 30.0%
TCTACAACAAATACATGTTG+GGG + chr4.4:70156860-70156879 MS.gene97065:intron 30.0%
TGACCAATTCTGTTATAAGT+GGG + chr4.4:70156301-70156320 MS.gene97065:intron 30.0%
TTACTCAAAACTAGCAAGTT+GGG + chr4.4:70154765-70154784 MS.gene97065:intron 30.0%
TTTACTCAAAACTAGCAAGT+TGG + chr4.4:70154764-70154783 MS.gene97065:intron 30.0%
TTTGGAAGGTGAGAAATATA+GGG + chr4.4:70155401-70155420 MS.gene97065:intron 30.0%
! AACATCATGTTTGGACTTTT+TGG + chr4.4:70155286-70155305 MS.gene97065:intron 30.0%
! AACTCACAAACAAAGCATTA+AGG + chr4.4:70155736-70155755 MS.gene97065:intron 30.0%
! GTATACATTCTGGCATTTTT+CGG - chr4.4:70155075-70155094 None:intergenic 30.0%
! TATGCTTGTCATTTGGTATT+CGG + chr4.4:70156626-70156645 MS.gene97065:intron 30.0%
! TGACATAATGACATTGGTTA+AGG + chr4.4:70154688-70154707 MS.gene97065:intron 30.0%
!! AAAATTCTGAGGTTCAAATC+TGG - chr4.4:70154870-70154889 None:intergenic 30.0%
!! TAATGCTTTGTTTGTGAGTT+TGG - chr4.4:70155736-70155755 None:intergenic 30.0%
!! TACAATCTTAGGCTTTGTTT+GGG + chr4.4:70155351-70155370 MS.gene97065:intron 30.0%
!! TGAGTTTCTTGTTGTTATGT+AGG + chr4.4:70154250-70154269 MS.gene97065:intron 30.0%
!! TTCTTGTTGTTATGTAGGTT+CGG + chr4.4:70154255-70154274 MS.gene97065:intron 30.0%
!!! AACTTGCTAGTTTTGAGTAA+AGG - chr4.4:70154765-70154784 None:intergenic 30.0%
!!! GGTTTTGAGTGAAATTTACT+TGG + chr4.4:70154511-70154530 MS.gene97065:intron 30.0%
AAAGAGAAAGGGTAGTTAAG+TGG - chr4.4:70154650-70154669 None:intergenic 35.0%
AAGAAATAGAGAACATTGGG+AGG - chr4.4:70155667-70155686 None:intergenic 35.0%
AAGTTCACCCAATTTGGATT+AGG - chr4.4:70154220-70154239 None:intergenic 35.0%
AATATTAGATGGAGAGAGAG+AGG + chr4.4:70153331-70153350 MS.gene97065:intron 35.0%
ACAAACTTCACTCTGAGTTA+TGG - chr4.4:70156830-70156849 None:intergenic 35.0%
ACACCTTAGAATCACTTGTA+AGG + chr4.4:70153765-70153784 MS.gene97065:intron 35.0%
ACATGATGTTTGGGCAAAAA+CGG - chr4.4:70155276-70155295 None:intergenic 35.0%
ACGGAATTATGCATTTACTC+GGG - chr4.4:70156755-70156774 None:intergenic 35.0%
ACTATTGACATATTGGCGTA+TGG + chr4.4:70157150-70157169 MS.gene97065:intron 35.0%
ACTTGTGCCAAATATGGATA+AGG + chr4.4:70154316-70154335 MS.gene97065:CDS 35.0%
AGAAATAGAGAACATTGGGA+GGG - chr4.4:70155666-70155685 None:intergenic 35.0%
AGGATCTCAAATGAGAATGT+AGG + chr4.4:70155962-70155981 MS.gene97065:intron 35.0%
CACTTATTAAATGGCAAACG+GGG - chr4.4:70153033-70153052 None:intergenic 35.0%
CAGAAAAAGTTCACCCAATT+TGG - chr4.4:70154226-70154245 None:intergenic 35.0%
CATTAAGGTTACTGCAAAAG+TGG - chr4.4:70155201-70155220 None:intergenic 35.0%
CCACTTATTAAATGGCAAAC+GGG - chr4.4:70153034-70153053 None:intergenic 35.0%
CCCACTTATTAAATGGCAAA+CGG - chr4.4:70153035-70153054 None:intergenic 35.0%
CTACAACAAATACATGTTGG+GGG + chr4.4:70156861-70156880 MS.gene97065:intron 35.0%
CTCAAAAATTGTATTGGAGG+AGG - chr4.4:70155586-70155605 None:intergenic 35.0%
CTCTCTCTCCATCTAATATT+GGG - chr4.4:70153331-70153350 None:intergenic 35.0%
GATAAATATGGATGAGACTC+AGG - chr4.4:70152693-70152712 None:intergenic 35.0%
GTCATTTGCCTAATCCAAAT+TGG + chr4.4:70154209-70154228 MS.gene97065:intron 35.0%
GTGACCAATTCTGTTATAAG+TGG + chr4.4:70156300-70156319 MS.gene97065:intron 35.0%
GTTAGAAGCCCAATATTAGA+TGG + chr4.4:70153320-70153339 MS.gene97065:intron 35.0%
TACAACAAATACATGTTGGG+GGG + chr4.4:70156862-70156881 MS.gene97065:intron 35.0%
TACGAAACACGAACACTTAT+CGG + chr4.4:70152869-70152888 MS.gene97065:intron 35.0%
TAGTTAGCCAATTTACCACT+GGG - chr4.4:70155988-70156007 None:intergenic 35.0%
TATGTAAACACAGACACACT+TGG + chr4.4:70155326-70155345 MS.gene97065:intron 35.0%
TCAAGAACTTGTGCCAAATA+TGG + chr4.4:70154310-70154329 MS.gene97065:CDS 35.0%
TCTAAGAACTCTATCTGAAG+TGG - chr4.4:70156913-70156932 None:intergenic 35.0%
TCTCCCACTTATAACAGAAT+TGG - chr4.4:70156307-70156326 None:intergenic 35.0%
TCTCTCTCTCCATCTAATAT+TGG - chr4.4:70153332-70153351 None:intergenic 35.0%
TGAACTGTCTGATTCTGATT+GGG + chr4.4:70154923-70154942 MS.gene97065:intron 35.0%
TGCTAATAATCCTTTCACTC+AGG + chr4.4:70152755-70152774 MS.gene97065:CDS 35.0%
TTAGCAACATTGACAGATGT+AGG - chr4.4:70152741-70152760 None:intergenic 35.0%
TTATTCTTGAGTCCTGAATC+CGG + chr4.4:70152794-70152813 MS.gene97065:intron 35.0%
TTGGAAGGTGAGAAATATAG+GGG + chr4.4:70155402-70155421 MS.gene97065:intron 35.0%
TTTGCAGTTAGTAACCGTTT+GGG + chr4.4:70156360-70156379 MS.gene97065:intron 35.0%
! AAGTAAAGTACCTGAGTGAA+AGG - chr4.4:70152768-70152787 None:intergenic 35.0%
! CAAACAAAGCATTAAGGTAG+TGG + chr4.4:70155742-70155761 MS.gene97065:intron 35.0%
! CATTTGATCTGGGATTACAT+GGG + chr4.4:70156418-70156437 MS.gene97065:intron 35.0%
! CCGTTTGCCATTTAATAAGT+GGG + chr4.4:70153032-70153051 MS.gene97065:intron 35.0%
! CGTGTGTTGTGTTTTATGAT+CGG + chr4.4:70154573-70154592 MS.gene97065:intron 35.0%
! CGTTTGCCATTTAATAAGTG+GGG + chr4.4:70153033-70153052 MS.gene97065:intron 35.0%
! CTCGTGATCCATCTTTTATT+CGG + chr4.4:70157313-70157332 MS.gene97065:CDS 35.0%
! CTTTGGAAGGTGAGAAATAT+AGG + chr4.4:70155400-70155419 MS.gene97065:intron 35.0%
! GTGCCATTATCAATTTCATG+AGG + chr4.4:70156884-70156903 MS.gene97065:intron 35.0%
! GTGTTATTATAGTGACATGG+AGG + chr4.4:70153868-70153887 MS.gene97065:intron 35.0%
! TCATGTTTGGACTTTTTGGA+AGG + chr4.4:70155290-70155309 MS.gene97065:intron 35.0%
! TTTTCAACTACACAGAAACC+TGG - chr4.4:70154792-70154811 None:intergenic 35.0%
! TTTTGCAGTTAGTAACCGTT+TGG + chr4.4:70156359-70156378 MS.gene97065:intron 35.0%
! TTTTGCCCAAACATCATGTT+TGG + chr4.4:70155277-70155296 MS.gene97065:intron 35.0%
!! CTACAATCTTAGGCTTTGTT+TGG + chr4.4:70155350-70155369 MS.gene97065:intron 35.0%
!! GAGGTGTTATTATAGTGACA+TGG + chr4.4:70153865-70153884 MS.gene97065:intron 35.0%
!! TCATCTTGCTTGCTGTTAAA+AGG - chr4.4:70154446-70154465 None:intergenic 35.0%
!!! TTTTTGAGTTCTCCCAAATG+AGG + chr4.4:70155598-70155617 MS.gene97065:intron 35.0%
AAACGGAGACATATCAGACA+AGG - chr4.4:70155259-70155278 None:intergenic 40.0%
AACTATCAGAACAGCAAAGG+AGG + chr4.4:70156714-70156733 MS.gene97065:intron 40.0%
AATCAAGCAAATCCGGATTC+AGG - chr4.4:70152809-70152828 None:intergenic 40.0%
ACTAGTTGCACAAGTCCATT+AGG + chr4.4:70156004-70156023 MS.gene97065:intron 40.0%
AGGAACTATCAGAACAGCAA+AGG + chr4.4:70156711-70156730 MS.gene97065:intron 40.0%
AGGGAATAATATGTCGTGGT+AGG + chr4.4:70156256-70156275 MS.gene97065:intron 40.0%
ATTCGACACACCAACAACAT+GGG - chr4.4:70153296-70153315 None:intergenic 40.0%
CAATATCAACTTGGCGGAAT+TGG - chr4.4:70154995-70155014 None:intergenic 40.0%
CACACACAATATCAACTTGG+CGG - chr4.4:70155001-70155020 None:intergenic 40.0%
CACACTTGGACTACAATCTT+AGG + chr4.4:70155340-70155359 MS.gene97065:intron 40.0%
CCTCCTTACAAGTGATTCTA+AGG - chr4.4:70153771-70153790 None:intergenic 40.0%
CCTTAGAATCACTTGTAAGG+AGG + chr4.4:70153768-70153787 MS.gene97065:intron 40.0%
CTAGTTAGCCAATTTACCAC+TGG - chr4.4:70155989-70156008 None:intergenic 40.0%
CTGAACTGTCTGATTCTGAT+TGG + chr4.4:70154922-70154941 MS.gene97065:intron 40.0%
GAAATAGAGAACATTGGGAG+GGG - chr4.4:70155665-70155684 None:intergenic 40.0%
GAGGAGAACCGAATAAAAGA+TGG - chr4.4:70157324-70157343 None:intergenic 40.0%
GAGGGTAGCTTAAGAATCAT+GGG - chr4.4:70153432-70153451 None:intergenic 40.0%
GATGTGATGTCCAATTCACT+TGG + chr4.4:70153389-70153408 MS.gene97065:intron 40.0%
GCAAGACCCCACTTATTAAA+TGG - chr4.4:70153042-70153061 None:intergenic 40.0%
GGATAGGGAATAATATGTCG+TGG + chr4.4:70156252-70156271 MS.gene97065:intron 40.0%
GGGAATAATATGTCGTGGTA+GGG + chr4.4:70156257-70156276 MS.gene97065:intron 40.0%
GGGTCTCACAATACACAATA+CGG - chr4.4:70153013-70153032 None:intergenic 40.0%
GTAAGTTATGCTGTTCGATG+TGG + chr4.4:70155928-70155947 MS.gene97065:intron 40.0%
GTATGCGATACTTGTGTTGA+CGG + chr4.4:70156191-70156210 MS.gene97065:intron 40.0%
GTCCACACACAATATCAACT+TGG - chr4.4:70155004-70155023 None:intergenic 40.0%
TAACATCACTCTCCACCTAA+TGG - chr4.4:70156022-70156041 None:intergenic 40.0%
TCAGAAGCAACCAAGTGAAT+TGG - chr4.4:70153402-70153421 None:intergenic 40.0%
TCTAATAACAACGTTGCTGC+TGG + chr4.4:70152651-70152670 MS.gene97065:CDS 40.0%
TCTCATATAATGGCTAGCAC+CGG + chr4.4:70157254-70157273 MS.gene97065:intron 40.0%
TCTGTTATAAGTGGGAGAAC+AGG + chr4.4:70156309-70156328 MS.gene97065:intron 40.0%
TGAGGGTAGCTTAAGAATCA+TGG - chr4.4:70153433-70153452 None:intergenic 40.0%
TGTGTGTTTAAAGGGAGTTG+AGG + chr4.4:70154023-70154042 MS.gene97065:intron 40.0%
TTCTTCTTTGGCGGAATTCA+CGG + chr4.4:70156137-70156156 MS.gene97065:intron 40.0%
TTGACAGATGTAGGAGTAAG+TGG - chr4.4:70152732-70152751 None:intergenic 40.0%
! AGTTAGTAACCGTTTGGGTT+GGG + chr4.4:70156365-70156384 MS.gene97065:intron 40.0%
! ATTGTATTGGAGGAGGGTAT+TGG - chr4.4:70155579-70155598 None:intergenic 40.0%
! CCCGTTTGCCATTTAATAAG+TGG + chr4.4:70153031-70153050 MS.gene97065:intron 40.0%
! CGAGTCATGCTATTTGTTAC+AGG + chr4.4:70156048-70156067 MS.gene97065:intron 40.0%
! CTTTGTTTGTGAGTTTGGAG+GGG - chr4.4:70155731-70155750 None:intergenic 40.0%
! GCATTTGATCTGGGATTACA+TGG + chr4.4:70156417-70156436 MS.gene97065:intron 40.0%
! TTGATATTGTGTGTGGACTG+TGG + chr4.4:70155006-70155025 MS.gene97065:intron 40.0%
! TTGTTGTTATGTAGGTTCGG+AGG + chr4.4:70154258-70154277 MS.gene97065:intron 40.0%
!! ATCCAAGGAGTATTGCTGAA+AGG + chr4.4:70154136-70154155 MS.gene97065:CDS 40.0%
!! GCTTTGTTTGTGAGTTTGGA+GGG - chr4.4:70155732-70155751 None:intergenic 40.0%
!! TCCAAGGAGTATTGCTGAAA+GGG + chr4.4:70154137-70154156 MS.gene97065:CDS 40.0%
!! TGCTTTGTTTGTGAGTTTGG+AGG - chr4.4:70155733-70155752 None:intergenic 40.0%
!! TTAGGCTTTGTTTGGGAGTT+TGG + chr4.4:70155358-70155377 MS.gene97065:intron 40.0%
!! TTGTATTGGAGGAGGGTATT+GGG - chr4.4:70155578-70155597 None:intergenic 40.0%
AAATGAGAATGTAGGCCCAG+TGG + chr4.4:70155970-70155989 MS.gene97065:intron 45.0%
ACACAACGCATGTCTGATAC+CGG - chr4.4:70152907-70152926 None:intergenic 45.0%
ACCCTTTCAGCAATACTCCT+TGG - chr4.4:70154141-70154160 None:intergenic 45.0%
ACTGTCTGATTCTGATTGGG+CGG + chr4.4:70154926-70154945 MS.gene97065:intron 45.0%
AGGTTCAAATCTGGACCATG+TGG - chr4.4:70154861-70154880 None:intergenic 45.0%
AGTGTTTCATCTCTTCTGCG+AGG + chr4.4:70156393-70156412 MS.gene97065:intron 45.0%
AGTTGCACAAGTCCATTAGG+TGG + chr4.4:70156007-70156026 MS.gene97065:intron 45.0%
ATGTAGGCCCAGTGGTAAAT+TGG + chr4.4:70155978-70155997 MS.gene97065:intron 45.0%
CAACTTGGCGGAATTGGATT+AGG - chr4.4:70154989-70155008 None:intergenic 45.0%
CAGTTAGTAACCGTTTGGGT+TGG + chr4.4:70156364-70156383 MS.gene97065:intron 45.0%
CATTCGACACACCAACAACA+TGG - chr4.4:70153297-70153316 None:intergenic 45.0%
CGCTTTGCTCGAATCTTACA+CGG - chr4.4:70154102-70154121 None:intergenic 45.0%
CGTTTCTACTCAATCCGATC+CGG - chr4.4:70157276-70157295 None:intergenic 45.0%
GTTCTCCTCAACGTTTCAAG+AGG + chr4.4:70157335-70157354 MS.gene97065:CDS 45.0%
TACCGCAGAGATGTTAGATG+AGG + chr4.4:70156540-70156559 MS.gene97065:CDS 45.0%
TCTTCTTTGGCGGAATTCAC+GGG + chr4.4:70156138-70156157 MS.gene97065:intron 45.0%
TGATTGGATGCCCATGTTGT+TGG + chr4.4:70153283-70153302 MS.gene97065:intron 45.0%
TGTAAGATTCGAGCAAAGCG+TGG + chr4.4:70154102-70154121 MS.gene97065:CDS 45.0%
TTAAAGGGAGTTGAGGACAG+TGG + chr4.4:70154030-70154049 MS.gene97065:intron 45.0%
TTAACTCAACTCCAGCGAGT+TGG + chr4.4:70152544-70152563 MS.gene97065:CDS 45.0%
TTTGTGAGTTTGGAGGGGAA+GGG - chr4.4:70155726-70155745 None:intergenic 45.0%
! AAAACTAGCAAGTTGGGACC+AGG + chr4.4:70154771-70154790 MS.gene97065:intron 45.0%
! CTTTGTTTGGGAGTTTGGAG+GGG + chr4.4:70155363-70155382 MS.gene97065:intron 45.0%
! TATAATGGCTAGCACCGGAT+CGG + chr4.4:70157259-70157278 MS.gene97065:intron 45.0%
!! AGGGGAGAGCTTTGGAATAA+AGG - chr4.4:70155703-70155722 None:intergenic 45.0%
!! CGCCAAGTTGATATTGTGTG+TGG + chr4.4:70154999-70155018 MS.gene97065:intron 45.0%
!! GCTTTGTTTGGGAGTTTGGA+GGG + chr4.4:70155362-70155381 MS.gene97065:intron 45.0%
!! GTGGATTTGCTACTCATCCA+AGG + chr4.4:70154121-70154140 MS.gene97065:CDS 45.0%
!! TGTATTGGAGGAGGGTATTG+GGG - chr4.4:70155577-70155596 None:intergenic 45.0%
AACAACGTTGCTGCTGGACA+TGG + chr4.4:70152657-70152676 MS.gene97065:CDS 50.0%
AACGATTCGAACCAACTCGC+TGG - chr4.4:70152558-70152577 None:intergenic 50.0%
AAGTGGGAGAACAGGAGAGA+GGG + chr4.4:70156317-70156336 MS.gene97065:intron 50.0%
ACACTGGGACATGACTCATG+AGG - chr4.4:70153451-70153470 None:intergenic 50.0%
ATAGAGAACATTGGGAGGGG+AGG - chr4.4:70155662-70155681 None:intergenic 50.0%
CACAACGCATGTCTGATACC+GGG - chr4.4:70152906-70152925 None:intergenic 50.0%
CACTGGGACATGACTCATGA+GGG - chr4.4:70153450-70153469 None:intergenic 50.0%
CGCAGAGATGTTAGATGAGG+CGG + chr4.4:70156543-70156562 MS.gene97065:CDS 50.0%
CGCCTCATCTAACATCTCTG+CGG - chr4.4:70156545-70156564 None:intergenic 50.0%
GGATGAGACTCAGGAGTTGA+AGG - chr4.4:70152684-70152703 None:intergenic 50.0%
GTTTGTGAGTTTGGAGGGGA+AGG - chr4.4:70155727-70155746 None:intergenic 50.0%
TAAGTGGGAGAACAGGAGAG+AGG + chr4.4:70156316-70156335 MS.gene97065:intron 50.0%
TAGAGAACATTGGGAGGGGA+GGG - chr4.4:70155661-70155680 None:intergenic 50.0%
TCGATGTGGCAGTGTCTGTT+AGG + chr4.4:70155942-70155961 MS.gene97065:intron 50.0%
! ACCATGTGGTCTTGATCGGA+CGG - chr4.4:70154847-70154866 None:intergenic 50.0%
! CTGGACCATGTGGTCTTGAT+CGG - chr4.4:70154851-70154870 None:intergenic 50.0%
! GGCTTAGTGGGTGTAAAGAG+CGG + chr4.4:70156159-70156178 MS.gene97065:intron 50.0%
!! CTGCGAGGAGCATTTGATCT+GGG + chr4.4:70156408-70156427 MS.gene97065:intron 50.0%
!! GGCTTTGTTTGGGAGTTTGG+AGG + chr4.4:70155361-70155380 MS.gene97065:intron 50.0%
!! GTATTGGAGGAGGGTATTGG+GGG - chr4.4:70155576-70155595 None:intergenic 50.0%
!! TATTGGAGGAGGGTATTGGG+GGG - chr4.4:70155575-70155594 None:intergenic 50.0%
!! TCTGCGAGGAGCATTTGATC+TGG + chr4.4:70156407-70156426 MS.gene97065:intron 50.0%
!! TTATCGGATTAGCCGTGTCC+CGG + chr4.4:70152885-70152904 MS.gene97065:intron 50.0%
AACAGGAGAGAGGGAAGGGA+GGG + chr4.4:70156326-70156345 MS.gene97065:intron 55.0%
ATATGTCGTGGTAGGGAGCG+AGG + chr4.4:70156264-70156283 MS.gene97065:intron 55.0%
CACTCTCTGCCCAACCCAAA+CGG - chr4.4:70156377-70156396 None:intergenic 55.0%
CTGTGCAGTCAGCATGCTCA+AGG + chr4.4:70154821-70154840 MS.gene97065:intron 55.0%
GCATGTCTGATACCGGGACA+CGG - chr4.4:70152900-70152919 None:intergenic 55.0%
GCGGAATTCACGGGCTTAGT+GGG + chr4.4:70156147-70156166 MS.gene97065:intron 55.0%
GGAGAACAGGAGAGAGGGAA+GGG + chr4.4:70156322-70156341 MS.gene97065:intron 55.0%
GTTTGGGAGTTTGGAGGGGA+GGG + chr4.4:70155367-70155386 MS.gene97065:intron 55.0%
TATGTCGTGGTAGGGAGCGA+GGG + chr4.4:70156265-70156284 MS.gene97065:intron 55.0%
TGAGTTTGGAGGGGAAGGGA+GGG - chr4.4:70155722-70155741 None:intergenic 55.0%
TGTTTGGGAGTTTGGAGGGG+AGG + chr4.4:70155366-70155385 MS.gene97065:intron 55.0%
TTTGGGAGTTTGGAGGGGAG+GGG + chr4.4:70155368-70155387 MS.gene97065:intron 55.0%
! GATCACGAGTGTCGCACGAA+CGG - chr4.4:70157302-70157321 None:intergenic 55.0%
!! ATGCAACCTGTTTCTGGCGG+TGG + chr4.4:70152501-70152520 MS.gene97065:CDS 55.0%
!! GTGGTGGTGGTGGTTTGACA+CGG + chr4.4:70152520-70152539 MS.gene97065:CDS 55.0%
!!! AGGAGGGTATTGGGGGGTTT+TGG - chr4.4:70155569-70155588 None:intergenic 55.0%
!!! AGGGTATTGGGGGGTTTTGG+AGG - chr4.4:70155566-70155585 None:intergenic 55.0%
!!! GGGTATTGGGGGGTTTTGGA+GGG - chr4.4:70155565-70155584 None:intergenic 55.0%
ACATTGGGAGGGGAGGGCTT+TGG - chr4.4:70155655-70155674 None:intergenic 60.0%
AGGGAGCGAGGGTGAGCAAA+TGG + chr4.4:70156276-70156295 MS.gene97065:intron 60.0%
CATTGGGAGGGGAGGGCTTT+GGG - chr4.4:70155654-70155673 None:intergenic 60.0%
GAACAGGAGAGAGGGAAGGG+AGG + chr4.4:70156325-70156344 MS.gene97065:intron 60.0%
GAGTTTGGAGGGGAAGGGAG+GGG - chr4.4:70155721-70155740 None:intergenic 60.0%
GAGTTTGGAGGGGAGGGGAA+GGG + chr4.4:70155373-70155392 MS.gene97065:intron 60.0%
GCCGTCCGATCAAGACCACA+TGG + chr4.4:70154843-70154862 MS.gene97065:intron 60.0%
GGCGGAATTCACGGGCTTAG+TGG + chr4.4:70156146-70156165 MS.gene97065:intron 60.0%
GGGAGAACAGGAGAGAGGGA+AGG + chr4.4:70156321-70156340 MS.gene97065:intron 60.0%
GTGAGTTTGGAGGGGAAGGG+AGG - chr4.4:70155723-70155742 None:intergenic 60.0%
! AGAGAGGGAAGGGAGGGCAT+TGG + chr4.4:70156332-70156351 MS.gene97065:intron 60.0%
!! CAACCTGTTTCTGGCGGTGG+TGG + chr4.4:70152504-70152523 MS.gene97065:CDS 60.0%
CCACCACCACCGCCAGAAAC+AGG - chr4.4:70152510-70152529 None:intergenic 65.0%
GGAGTTTGGAGGGGAGGGGA+AGG + chr4.4:70155372-70155391 MS.gene97065:intron 65.0%
GGGAAGGGAGGGGAGAGCTT+TGG - chr4.4:70155711-70155730 None:intergenic 65.0%
TTGGAGGGGAGGGGAAGGGA+GGG + chr4.4:70155377-70155396 MS.gene97065:intron 65.0%
TTTGGAGGGGAGGGGAAGGG+AGG + chr4.4:70155376-70155395 MS.gene97065:intron 65.0%
!! CCTGTTTCTGGCGGTGGTGG+TGG + chr4.4:70152507-70152526 MS.gene97065:CDS 65.0%
!! GGGGAAGGGAGGGCTTTGGA+AGG + chr4.4:70155387-70155406 MS.gene97065:intron 65.0%
!! GTTTCTGGCGGTGGTGGTGG+TGG + chr4.4:70152510-70152529 MS.gene97065:CDS 65.0%
GGGAGGGGAAGGGAGGGCTT+TGG + chr4.4:70155383-70155402 MS.gene97065:intron 70.0%


Chromosome Type Strat End Strand Name
chr4.4 gene 70152501 70157360 70152501 ID=MS.gene97065
chr4.4 mRNA 70152501 70157360 70152501 ID=MS.gene97065.t1;Parent=MS.gene97065
chr4.4 exon 70152501 70152776 70152501 ID=MS.gene97065.t1.exon1;Parent=MS.gene97065.t1
chr4.4 CDS 70152501 70152776 70152501 ID=cds.MS.gene97065.t1;Parent=MS.gene97065.t1
chr4.4 exon 70154036 70154158 70154036 ID=MS.gene97065.t1.exon2;Parent=MS.gene97065.t1
chr4.4 CDS 70154036 70154158 70154036 ID=cds.MS.gene97065.t1;Parent=MS.gene97065.t1
chr4.4 exon 70154272 70154337 70154272 ID=MS.gene97065.t1.exon3;Parent=MS.gene97065.t1
chr4.4 CDS 70154272 70154337 70154272 ID=cds.MS.gene97065.t1;Parent=MS.gene97065.t1
chr4.4 exon 70156532 70156600 70156532 ID=MS.gene97065.t1.exon4;Parent=MS.gene97065.t1
chr4.4 CDS 70156532 70156600 70156532 ID=cds.MS.gene97065.t1;Parent=MS.gene97065.t1
chr4.4 exon 70157271 70157360 70157271 ID=MS.gene97065.t1.exon5;Parent=MS.gene97065.t1
chr4.4 CDS 70157271 70157360 70157271 ID=cds.MS.gene97065.t1;Parent=MS.gene97065.t1
Gene Sequence

>MS.gene97065

ATGCAACCTGTTTCTGGCGGTGGTGGTGGTGGTTTGACACGGTTTAACTCAACTCCAGCGAGTTGGTTCGAATCGTTTATTCTTAAAGAAGAAGATGAAGTTGATGAAAGACAACAACAAGATCACAACTTAAGTTTTACTCAACTGCTTTCTAATAACAACGTTGCTGCTGGACATGGTCCTTCAACTCCTGAGTCTCATCCATATTTATCTGATTATTACTCTTCACCACTTACTCCTACATCTGTCAATGTTGCTAATAATCCTTTCACTCAGGTACTTTACTTACTTTATTATTCTTGAGTCCTGAATCCGGATTTGCTTGATTTATCTATCTTTATTTACTCTTCATTTATGAGAGATAGACATACGAAACACGAACACTTATCGGATTAGCCGTGTCCCGGTATCAGACATGCGTTGTGTCTGTCACCGACACATATAATTACATTGAATTATTTGATTTTCTCAAATTATTAACGATGTCGGCGTGTCAGTGTCCGTATTGTCCGTATTGTGTATTGTGAGACCCCGTTTGCCATTTAATAAGTGGGGTCTTGCTAATATTCTACTTGTGTATATCTCTCTCATGAATGAAGCTAATACGAACTCTATCAAGATGTTCTCTTATTCATTTTATAACTTTTGTTTTATATGTAATGATTTAATTTGTATACGTCATTGGTTTTTTTATGTGCATTCAACCATATATATCAGCATGTAGATATTTTTAGTAACGTTTTAGTAGGAATTAAATAACAAAATGATATTAACATGTGATTTGATTGGATGCCCATGTTGTTGGTGTGTCGAATGAGAGTTAGAAGCCCAATATTAGATGGAGAGAGAGAGGAAACGTATATCGAATACATTCAAGTCTTCGGTAAAGATGTGATGTCCAATTCACTTGGTTGCTTCTGAGTTTTGACCCATGATTCTTAAGCTACCCTCATGAGTCATGTCCCAGTGTGTATAACATAGTTTTACAACTGTTAGGTGCGTAATAATTAATTCTATGTATGAAAATTGTGTGAACACTCATTTTGATTCTTTAGATTATAAGTGTTGGTCACACAATTTATTCTCTCGAATTTGCGAAGTATCAATTTAGTCATTAACTTAACAAAATATCAATCAATTTAGGTATTTTTCTAAATTTAAACCACTATTTTAAATGTTCTATTTAAATCTTCTATGTTTGTCTTAATGCAGCAAAAAAGTATTCAAATATTCAAGACAATATGAGACTTTTCAAGCACGAAAAACACCTTAGAATCACTTGTAAGGAGGATTGACTAAACCAAAAGATATTCATATACAGAAAGATGATAGGAATTATGTTATCTATATAATATACTGATATGGAGGTGTTATTATAGTGACATGGAGGAGTATAACAGAACATAATGAGGTTGTTTGATACGTATAAAACACTACTTAGTGAGAAAATACTTTGGTTTTTGTTCTTATTGCTTATTGGGAAAAAAGTTAACTATTATCGAATTAACATGTTCTGTATTTTTGTGTGTTTAAAGGGAGTTGAGGACAGTGGCATAGCAATTGACCTTAAAATGGACAAAATTTTAGAGGGTTCAGTTCCGTGTAAGATTCGAGCAAAGCGTGGATTTGCTACTCATCCAAGGAGTATTGCTGAAAGGGTAACTCTCGTTACTTGTCATAATGCTAATACTAATTTGGGATTTGCTTAGTCATTTGCCTAATCCAAATTGGGTGAACTTTTTCTGTTTTTGAGTTTCTTGTTGTTATGTAGGTTCGGAGGACTCGTATTAGTGATCGCATAAGAAAACTTCAAGAACTTGTGCCAAATATGGATAAGGTTTAGCTTTTCATCTTAAACCACTATAACATGTTTGTTTAATGGTTTTTGTCACCCAGAAATGATTTTGTTCAAGTTGTTATTTACCATACATTATGCTTTGTACCTTTTAACAGCAAGCAAGATGATGAATTATCATAAGCATAACCTTTCTTTTCTTTTATTACATATGAGGTTTTGAGTGAAATTTACTTGGAAAGATATTGCAATGATTATTTAATTCATCTATGATCAACGTGTGTTGTGTTTTATGATCGGTAATTCTTTCACTTTTGAGTAGTGTCTTAACTGTGAAGAAAAGTTCTGCATCCACTTAACTACCCTTTCTCTTTGAATTTGAAGTTAATTATTGACATAATGACATTGGTTAAGGAAACAAATTTAGAAAGTACTAATTGGGGATATTAAATTTTCCTTAAAAGTTCCTTTACTCAAAACTAGCAAGTTGGGACCAGGTTTCTGTGTAGTTGAAAAGCAGTGCAGCTGTGCAGTCAGCATGCTCAAGGCCGTCCGATCAAGACCACATGGTCCAGATTTGAACCTCAGAATTTTATATTAAACAAACATAAAAACAGTCTTGATATCTGAACTGTCTGATTCTGATTGGGCGGTTCTAACGTGCTGACTGCATACAATCATATGACTGCACCTAATCCAATTCCGCCAAGTTGATATTGTGTGTGGACTGTGGAGTAGAAAAGAGATGTTCTTTACTATTTGAATAAATCAGCAATCCGAAAAATGCCAGAATGTATACGCTGAATTTAAGTCCAACTTAACTACAAATCCTTAGGTTTTAATCCCCTTTTATACTTTTTATTCAGGTTCTTTTTGCTATGTGTAAGTTTATTAGAAAATTTCCACTTTTGCAGTAACCTTAATGATTGAGAGATATCAAAAATCATAAATGTGAGGTAACCTTGTCTGATATGTCTCCGTTTTTGCCCAAACATCATGTTTGGACTTTTTGGAAGGTGAAGTCTTCGTCTATGTAAACACAGACACACTTGGACTACAATCTTAGGCTTTGTTTGGGAGTTTGGAGGGGAGGGGAAGGGAGGGCTTTGGAAGGTGAGAAATATAGGGGAAAATAGATAAATCTTTCACATTTTTGGGAAGAGTATTTTTTTTTTAGAGAATGATAAATTAATGCTTATGATTAATATATTTTTAATTTTAAAAATATTATAACAACATAAATTAAATTTGAAGGATTCATATAAACCCTCCAAAACCCCCCAATACCCTCCTCCAATACAATTTTTGAGTTCTCCCAAATGAGGATGATTTTGTATTATGAAGAAAAATGAACTCCCAAAGCCCTCCCCTCCCAATGTTCTCTATTTCTTTCACTTGCTCATTCCTTTATTCCAAAGCTCTCCCCTCCCTTCCCCTCCAAACTCACAAACAAAGCATTAAGGTAGTGGATACAATGTAACTAATATGGTCATAGAAGCAGCAAAAGTTTTGTCCCCTGACTTTATTTATCTTTTGTTATAGAAATTGTATATGCAGAAGCACTTATATAATATTTGATTTAGAAACAGCTATGAATGTCTCTAAAGCTTAGTTTGTCGTTTCTATTTTCTAGTAAGTTATGCTGTTCGATGTGGCAGTGTCTGTTAGGATCTCAAATGAGAATGTAGGCCCAGTGGTAAATTGGCTAACTAGTTGCACAAGTCCATTAGGTGGAGAGTGATGTTATCAAAACGAGTCATGCTATTTGTTACAGGTCCTTTTAGAAACGAAAGACATGAATTAGTAAGCGTGAATGTGTGAAAAATATTGACACTATTAATTTCTTCTTTGGCGGAATTCACGGGCTTAGTGGGTGTAAAGAGCGGTAGAGATTAGTATGCGATACTTGTGTTGACGGTTTCGTAAAAATAAGCATTTCTCTATCAAAATATAGGAGGATAGGGAATAATATGTCGTGGTAGGGAGCGAGGGTGAGCAAATGGTGTGACCAATTCTGTTATAAGTGGGAGAACAGGAGAGAGGGAAGGGAGGGCATTGGATATTTTTGCAGTTAGTAACCGTTTGGGTTGGGCAGAGAGTGTTTCATCTCTTCTGCGAGGAGCATTTGATCTGGGATTACATGGGTTTATCTTCTATAATATCTTCTTTTTTCATCAATAATACAATTTCATTTTCTCTCTTAATTGCGGTTCCTAAGTTTCTTTTGTTCTTGTAGCAAACAAATACCGCAGAGATGTTAGATGAGGCGGTAGCTTATGTCAAGTTTCTACAGAATCAAATTGAGGTAATCTTTTGTGTGTGACTAAATTTATGCTTGTCATTTGGTATTCGGTACTCTCTGCATTTTGTCACGCACTAAGTTGTTGACTAATCTTGCATGAATTGATACATTATAGGAACTATCAGAACAGCAAAGGAGGTGTAAATGCACGATTCCCGAGTAAATGCATAATTCCGTTTGCATATTCTCTTTTGAATTATCATATTTTTGGTGTTTTGATGAAGATTAACCATAACTCAGAGTGAAGTTTGTGTCACATTACTCTACAACAAATACATGTTGGGGGGTGCCATTATCAATTTCATGAGGAATCCACTTCAGATAGAGTTCTTAGATAGTGTGTTATAGTTTCATAGTTATAGTGTCGTACAACTCATACACAAATTTGCTAATATAATTTAGTAGCTTCTTGAGCTTTGTTTTTGCTGAGATATAATTAGTCATATGTAAAATTCTTCAAATGATCAGAAGTTTATGCAAATTGCCGCCATATAGATGATAAAATTTTGCATTAGGGTTTTAGTCATTTTTGTTAGAAGTTAGGAATTTTCTACTATTGACATATTGGCGTATGGAAACAAATCTAGACCGAAATAAATGAAAAACAAAGTAGTTATTATATGAAGAATACATACTTAAATAATTTGATACTTGCTTCTCATATAATGGCTAGCACCGGATCGGATTGAGTAGAAACGTTGCCGTTCGTGCGACACTCGTGATCCATCTTTTATTCGGTTCTCCTCAACGTTTCAAGAGGTAA
Protein sequence

>MS.gene97065.t1

MQPVSGGGGGGLTRFNSTPASWFESFILKEEDEVDERQQQDHNLSFTQLLSNNNVAAGHGPSTPESHPYLSDYYSSPLTPTSVNVANNPFTQGVEDSGIAIDLKMDKILEGSVPCKIRAKRGFATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTAEMLDEAVAYVKFLQNQIEHRIGLSRNVAVRATLVIHLLFGSPQRFKR