AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene97229

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene97229.t1 MTR_7g013380 82.443 262 46 0 1 262 1 262 2.25e-150 422
MS.gene97229.t1 MTR_4g133300 34.468 235 143 5 26 259 20 244 2.40e-34 125
MS.gene97229.t1 MTR_4g133300 35.294 170 103 4 5 173 81 244 1.86e-21 90.9
MS.gene97229.t1 MTR_4g133470 34.894 235 142 5 26 259 20 244 4.16e-34 124
MS.gene97229.t1 MTR_4g133470 35.882 170 102 4 5 173 81 244 3.21e-21 90.1
MS.gene97229.t1 MTR_3g006125 39.521 167 93 3 99 259 89 253 1.87e-28 109
MS.gene97229.t1 MTR_3g006125 38.415 164 93 3 11 168 87 248 3.78e-25 100
MS.gene97229.t1 MTR_3g006185 38.554 166 95 3 99 259 8 171 1.07e-26 102
MS.gene97229.t1 MTR_3g006185 35.882 170 102 3 9 173 4 171 6.66e-23 92.8
MS.gene97229.t1 MTR_3g006105 38.554 166 93 4 99 258 8 170 4.97e-26 101
MS.gene97229.t1 MTR_3g006105 35.976 164 97 3 11 168 6 167 2.03e-22 91.7
MS.gene97229.t1 MTR_3g006105 43.750 80 44 1 185 264 8 86 7.05e-14 68.6
MS.gene97229.t1 MTR_1g104960 36.196 163 98 3 99 259 13 171 3.46e-25 99.0
MS.gene97229.t1 MTR_1g104960 32.099 162 104 3 11 170 11 168 1.30e-19 84.0
MS.gene97229.t1 MTR_1g105955 43.066 137 71 2 118 254 33 162 1.54e-24 97.4
MS.gene97229.t1 MTR_1g105955 38.462 156 85 4 14 168 17 162 4.14e-21 88.2
MS.gene97229.t1 MTR_3g006150 38.065 155 92 3 101 252 3 156 1.46e-23 94.0
MS.gene97229.t1 MTR_3g006150 38.849 139 77 3 32 166 22 156 2.16e-22 90.9
MS.gene97229.t1 MTR_3g006065 39.073 151 88 3 105 252 7 156 3.67e-23 94.0
MS.gene97229.t1 MTR_3g006065 38.129 139 78 3 32 166 22 156 1.08e-20 87.4
MS.gene97229.t1 MTR_8g062700 36.842 171 99 5 85 250 25 191 6.56e-23 98.6
MS.gene97229.t1 MTR_8g062700 37.681 138 82 3 29 164 56 191 2.54e-19 88.2
MS.gene97229.t1 MTR_8g062700 53.226 62 29 0 201 262 56 117 1.51e-14 73.9
MS.gene97229.t1 MTR_8g062700 36.842 171 99 5 85 250 25 191 6.62e-23 98.6
MS.gene97229.t1 MTR_8g062700 37.681 138 82 3 29 164 56 191 2.54e-19 88.2
MS.gene97229.t1 MTR_8g062700 53.226 62 29 0 201 262 56 117 1.51e-14 73.9
MS.gene97229.t1 MTR_1g104980 33.742 163 87 4 102 262 2 145 6.59e-22 90.1
MS.gene97229.t1 MTR_1g104980 32.317 164 90 4 16 177 2 146 2.75e-18 80.5
MS.gene97229.t1 MTR_7g013410 31.973 147 93 3 103 249 2 141 1.05e-19 83.2
MS.gene97229.t1 MTR_7g013410 31.293 147 94 3 17 163 2 141 1.62e-19 82.8
MS.gene97229.t1 MTR_6g008995 32.895 152 98 2 99 250 37 184 2.86e-18 84.3
MS.gene97229.t1 MTR_6g008995 30.464 151 101 2 14 164 38 184 6.69e-15 74.3
MS.gene97229.t1 MTR_6g008995 39.474 76 44 1 185 260 37 110 9.26e-11 62.0
MS.gene97229.t1 MTR_5g036670 35.971 139 85 2 115 251 57 193 3.16e-18 84.7
MS.gene97229.t1 MTR_5g036670 33.803 142 84 3 29 165 57 193 4.05e-16 78.6
MS.gene97229.t1 MTR_5g036670 48.387 62 32 0 201 262 57 118 3.86e-12 66.6
MS.gene97229.t1 MTR_6g008970 32.911 158 100 3 95 250 59 212 3.02e-17 82.0
MS.gene97229.t1 MTR_6g008970 31.373 153 99 3 14 164 64 212 1.75e-14 73.9
MS.gene97229.t1 MTR_6g008970 41.026 78 44 1 185 262 63 138 5.57e-11 63.2
MS.gene97229.t1 MTR_6g008995 33.594 128 83 1 123 250 2 127 1.87e-15 75.9
MS.gene97229.t1 MTR_6g008995 30.469 128 87 1 37 164 2 127 8.74e-13 68.2
MS.gene97229.t1 MTR_1g104937 45.455 77 40 1 186 262 13 87 4.07e-14 67.4
MS.gene97229.t1 MTR_1g104937 42.500 80 44 1 11 90 10 87 2.69e-12 62.4
MS.gene97229.t1 MTR_1g104937 42.857 77 42 1 100 176 13 87 2.86e-12 62.4
MS.gene97229.t1 MTR_1g104940 43.750 80 43 1 183 262 12 89 4.46e-14 67.8
MS.gene97229.t1 MTR_1g104940 40.000 110 59 3 100 204 15 122 2.18e-13 65.9
MS.gene97229.t1 MTR_1g104940 41.026 78 44 1 13 90 14 89 5.92e-11 59.3
MS.gene97229.t1 MTR_1g105960 32.258 124 56 2 100 223 2 97 5.19e-13 64.3
MS.gene97229.t1 MTR_1g105960 38.961 77 45 1 186 262 2 76 1.54e-11 60.5
MS.gene97229.t1 MTR_1g105010 40.449 89 49 2 95 183 12 96 1.16e-12 63.5
MS.gene97229.t1 MTR_1g105010 42.857 77 42 1 186 262 17 91 5.93e-12 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene97229.t1 AT1G70030 34.395 157 93 4 96 249 8 157 4.31e-20 85.1
MS.gene97229.t1 AT1G70030 34.437 151 93 3 14 163 12 157 8.04e-19 81.6
MS.gene97229.t1 AT5G15020 38.686 137 82 2 115 251 66 200 5.52e-19 87.0
MS.gene97229.t1 AT5G15020 35.948 153 94 3 14 166 53 201 1.89e-17 82.8
MS.gene97229.t1 AT5G15020 38.686 137 82 2 115 251 66 200 5.67e-19 87.0
MS.gene97229.t1 AT5G15020 35.948 153 94 3 14 166 53 201 1.92e-17 82.4
MS.gene97229.t1 AT1G24230 24.590 244 155 5 3 241 4 223 1.22e-18 83.2
MS.gene97229.t1 AT1G24230 26.946 167 106 4 95 261 10 160 1.30e-13 69.3
MS.gene97229.t1 AT1G24190 35.152 165 95 7 91 250 6 163 1.33e-18 85.9
MS.gene97229.t1 AT1G24190 33.526 173 108 6 3 172 4 172 9.22e-18 83.6
MS.gene97229.t1 AT1G24190 41.463 82 46 1 185 266 14 93 8.88e-12 65.9
MS.gene97229.t1 AT1G24190 35.152 165 95 7 91 250 6 163 1.37e-18 85.9
MS.gene97229.t1 AT1G24190 33.526 173 108 6 3 172 4 172 8.46e-18 83.6
MS.gene97229.t1 AT1G24190 41.463 82 46 1 185 266 14 93 9.73e-12 65.5
MS.gene97229.t1 AT1G24190 35.152 165 95 7 91 250 6 163 1.45e-18 85.9
MS.gene97229.t1 AT1G24190 33.526 173 108 6 3 172 4 172 8.62e-18 83.6
MS.gene97229.t1 AT1G24190 41.463 82 46 1 185 266 14 93 9.81e-12 65.5
MS.gene97229.t1 AT1G10450 34.532 139 89 1 115 253 98 234 5.79e-18 84.0
MS.gene97229.t1 AT1G10450 30.667 150 101 2 31 180 100 246 1.24e-13 71.2
MS.gene97229.t1 AT1G10450 34.532 139 89 1 115 253 47 183 7.82e-18 83.6
MS.gene97229.t1 AT1G10450 31.387 137 92 1 31 167 49 183 1.34e-13 71.2
MS.gene97229.t1 AT1G10450 34.532 139 89 1 115 253 47 183 7.82e-18 83.6
MS.gene97229.t1 AT1G10450 31.387 137 92 1 31 167 49 183 1.34e-13 71.2
MS.gene97229.t1 AT1G59890 33.824 136 88 1 115 250 59 192 1.40e-17 82.8
MS.gene97229.t1 AT1G59890 31.126 151 100 2 14 164 46 192 4.12e-15 75.5
MS.gene97229.t1 AT1G59890 45.161 62 34 0 201 262 59 120 4.90e-11 63.5
MS.gene97229.t1 AT1G59890 33.824 136 88 1 115 250 59 192 1.42e-17 82.8
MS.gene97229.t1 AT1G59890 31.126 151 100 2 14 164 46 192 4.01e-15 75.9
MS.gene97229.t1 AT1G59890 45.161 62 34 0 201 262 59 120 5.13e-11 63.5
MS.gene97229.t1 AT1G59890 33.824 136 88 1 115 250 59 192 1.45e-17 82.8
MS.gene97229.t1 AT1G59890 31.126 151 100 2 14 164 46 192 4.36e-15 75.5
MS.gene97229.t1 AT1G59890 45.161 62 34 0 201 262 59 120 5.04e-11 63.5
MS.gene97229.t1 AT1G59890 33.824 136 88 1 115 250 59 192 1.47e-17 82.8
MS.gene97229.t1 AT1G59890 31.126 151 100 2 14 164 46 192 3.85e-15 75.9
MS.gene97229.t1 AT1G59890 45.161 62 34 0 201 262 59 120 5.17e-11 63.5
MS.gene97229.t1 AT3G01320 29.648 199 135 3 52 249 10 204 2.07e-17 82.4
MS.gene97229.t1 AT3G01320 29.018 224 146 6 14 232 58 273 5.49e-17 81.3
MS.gene97229.t1 AT3G01320 43.038 79 43 1 185 263 57 133 2.49e-12 67.4
MS.gene97229.t1 AT3G01320 29.648 199 135 3 52 249 10 204 2.26e-17 82.4
MS.gene97229.t1 AT3G01320 29.018 224 146 6 14 232 58 273 6.09e-17 81.3
MS.gene97229.t1 AT3G01320 43.038 79 43 1 185 263 57 133 2.54e-12 67.4
MS.gene97229.t1 AT1G70060 32.927 164 103 4 90 250 5 164 2.29e-17 82.4
MS.gene97229.t1 AT1G70060 32.727 165 104 4 3 164 4 164 1.10e-16 80.5
MS.gene97229.t1 AT1G70060 32.927 164 103 4 90 250 5 164 2.29e-17 82.4
MS.gene97229.t1 AT1G70060 32.727 165 104 4 3 164 4 164 1.10e-16 80.5
MS.gene97229.t1 AT1G24200 30.464 151 100 4 99 249 14 159 2.42e-13 67.4

Find 50 sgRNAs with CRISPR-Local

Find 64 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGAACAATTTCACTTTAAAT+TGG 0.240844 7.3:+84137748 MS.gene97229:CDS
AACATCAGTGACAAATTCTT+TGG 0.286454 7.3:-84137395 None:intergenic
ATAGATTTATTCAAGTTAAC+AGG 0.306329 7.3:+84136694 MS.gene97229:CDS
TAACTTTCTGAATGTCTTGA+AGG 0.345940 7.3:+84137095 MS.gene97229:CDS
TAACTTTCTGAATGTCTTGA+AGG 0.345940 7.3:+84137459 MS.gene97229:CDS
AAGAATTTGTCAATGATGTT+AGG 0.354099 7.3:+84137034 MS.gene97229:CDS
TAGAATTGATGATGCAAATC+TGG 0.365588 7.3:+84137625 MS.gene97229:intron
AGAACATTGTGACGTCAAAA+AGG 0.380889 7.3:+84136644 MS.gene97229:CDS
ATCTGAGGAGGAACAATCTC+TGG 0.399947 7.3:+84136987 MS.gene97229:CDS
AGTAGTTCAATCTTGATATA+AGG 0.418112 7.3:-84137297 None:intergenic
AGGATTGACGCTGCGAATCT+TGG 0.429259 7.3:+84137238 MS.gene97229:intron
ATCGGAGGAGGAAGAATCTC+TGG 0.453816 7.3:+84137351 MS.gene97229:CDS
AAGGGATTATTTGAAGGTCA+TGG 0.456386 7.3:+84136907 MS.gene97229:CDS
GAATCTTGGTAAATTATTGA+AGG 0.465615 7.3:+84137252 MS.gene97229:CDS
AAATCTCAGTAAATTCTTGA+AGG 0.476028 7.3:+84136888 MS.gene97229:CDS
AACTTCATTGACGAATTCCT+TGG 0.476864 7.3:-84136667 None:intergenic
AGCTTAATTTCAAATCCATC+AGG 0.487502 7.3:-84136961 None:intergenic
TTCTTGAAGGGATTATTTGA+AGG 0.491097 7.3:+84136901 MS.gene97229:CDS
AGCTTGATTTCATATCCATC+AGG 0.493606 7.3:-84137713 None:intergenic
AATCTTGGTAAATTATTGAA+GGG 0.506245 7.3:+84137253 MS.gene97229:CDS
TTATTGAAGGGATTATTTGA+AGG 0.508075 7.3:+84137265 MS.gene97229:CDS
AGCTTGATTTCAAATCCATC+GGG 0.513708 7.3:-84137325 None:intergenic
ATAATGAAGAAAATATTTGA+AGG 0.513952 7.3:+84137653 MS.gene97229:CDS
TTGAACTACTTCATGCCTGA+TGG 0.515459 7.3:+84136946 MS.gene97229:CDS
AATCTCAGTAAATTCTTGAA+GGG 0.520509 7.3:+84136889 MS.gene97229:CDS
TGAAATTAAGCTTCCATCTG+AGG 0.529531 7.3:+84136972 MS.gene97229:CDS
TGAAATCAAGCTTCCATTGG+AGG 0.531076 7.3:+84137724 MS.gene97229:CDS
AAGCTTGATTTCAAATCCAT+CGG 0.533316 7.3:-84137326 None:intergenic
AGAGATTCTTCCTCCTCCGA+TGG 0.536035 7.3:-84137349 None:intergenic
AGAGATTGTTCCTCCTCAGA+TGG 0.549137 7.3:-84136985 None:intergenic
TTAAACTACTTCCTACCTGA+TGG 0.558050 7.3:+84137698 MS.gene97229:CDS
TGAAATTGTTCCTCCTCCAA+TGG 0.565684 7.3:-84137737 None:intergenic
AATCAAGCTTCCATCGGAGG+AGG 0.577026 7.3:+84137339 MS.gene97229:CDS
ATATGAAATCAAGCTTCCAT+TGG 0.577817 7.3:+84137721 MS.gene97229:CDS
TTGAACTACTTCATGCCCGA+TGG 0.579628 7.3:+84137310 MS.gene97229:CDS
ATTTATTCAAGTTAATCAGA+GGG 0.582516 7.3:+84137062 MS.gene97229:CDS
TGATGCATTACAAGAAACAA+AGG 0.583155 7.3:+84136748 MS.gene97229:CDS
TGAAATCAAGCTTCCATCGG+AGG 0.587204 7.3:+84137336 MS.gene97229:CDS
GATTTATTCAAGTTAATCAG+AGG 0.587296 7.3:+84137061 MS.gene97229:CDS
GATTTATTCAAGTTAACAGG+AGG 0.594070 7.3:+84136697 MS.gene97229:CDS
GATTTACTCAAGTTAATCAG+AGG 0.604545 7.3:+84137425 MS.gene97229:CDS
ATTTACTCAAGTTAATCAGA+GGG 0.611533 7.3:+84137426 MS.gene97229:CDS
AATCAAGCTTCCATTGGAGG+AGG 0.611644 7.3:+84137727 MS.gene97229:CDS
AATTAAGCTTCCATCTGAGG+AGG 0.614296 7.3:+84136975 MS.gene97229:CDS
GGGCAACCCGTGATAATGGA+AGG 0.616033 7.3:+84136612 None:intergenic
ATTTATTCAAGTTAACAGGA+GGG 0.617938 7.3:+84136698 MS.gene97229:CDS
ATTTGAAATCAAGCTTCCAT+CGG 0.624462 7.3:+84137333 MS.gene97229:CDS
TGATTTCATATCCATCAGGT+AGG 0.626891 7.3:-84137709 None:intergenic
TGAAGGATTACAAGACACAA+AGG 0.630499 7.3:+84137112 MS.gene97229:CDS
TGAAGGATTACAAGACACAA+AGG 0.630499 7.3:+84137476 MS.gene97229:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTGTTATTATATTTTGAAA+TGG + chr7.3:84137520-84137539 MS.gene97229:intron 10.0%
!!! TTTATTTTTAAAGAATGAAA+TGG + chr7.3:84137546-84137565 MS.gene97229:intron 10.0%
!!! TTTTTTATTATATTGTGAAA+TGG + chr7.3:84137157-84137176 MS.gene97229:intron 10.0%
!! ACAATATAATAAAAAAGTAG+TGG - chr7.3:84137153-84137172 None:intergenic 15.0%
!! ATAATGAAGAAAATATTTGA+AGG + chr7.3:84137653-84137672 MS.gene97229:CDS 15.0%
!! CAAAATATAATAACAATTTG+TGG - chr7.3:84137517-84137536 None:intergenic 15.0%
!! CATTACAATAAAAAAAATAG+CGG - chr7.3:84136789-84136808 None:intergenic 15.0%
!!! AACTAATTTATTTATCCTTT+TGG + chr7.3:84137205-84137224 MS.gene97229:intron 15.0%
!! AACTAATTTATCTATCCTTT+CGG + chr7.3:84136841-84136860 MS.gene97229:intron 20.0%
!! AATCTTGGTAAATTATTGAA+GGG + chr7.3:84137253-84137272 MS.gene97229:CDS 20.0%
!! ATTCTACAAAATATACCAAA+TGG - chr7.3:84137611-84137630 None:intergenic 20.0%
!!! AATTAATTTGTCTATCCATT+TGG + chr7.3:84137593-84137612 MS.gene97229:intron 20.0%
!!! ATAGATTTATTCAAGTTAAC+AGG + chr7.3:84136694-84136713 MS.gene97229:CDS 20.0%
!!! ATTTATTCAAGTTAATCAGA+GGG + chr7.3:84137062-84137081 MS.gene97229:CDS 20.0%
!!! TGGATTCTATTAATTTTTGT+TGG + chr7.3:84137566-84137585 MS.gene97229:intron 20.0%
! AAATCTCAGTAAATTCTTGA+AGG + chr7.3:84136888-84136907 MS.gene97229:CDS 25.0%
! AAGAATTTGTCAATGATGTT+AGG + chr7.3:84137034-84137053 MS.gene97229:CDS 25.0%
! AATCTCAGTAAATTCTTGAA+GGG + chr7.3:84136889-84136908 MS.gene97229:CDS 25.0%
! AGTAGTTCAATCTTGATATA+AGG - chr7.3:84136936-84136955 None:intergenic 25.0%
! ATCCTACAAAATATACCAAA+AGG - chr7.3:84137223-84137242 None:intergenic 25.0%
! ATTTACTCAAGTTAATCAGA+GGG + chr7.3:84137426-84137445 MS.gene97229:CDS 25.0%
! GAATCTTGGTAAATTATTGA+AGG + chr7.3:84137252-84137271 MS.gene97229:CDS 25.0%
! GGAACAATTTCACTTTAAAT+TGG + chr7.3:84137748-84137767 MS.gene97229:CDS 25.0%
! TTATTGAAGGGATTATTTGA+AGG + chr7.3:84137265-84137284 MS.gene97229:CDS 25.0%
!! ATCCTTTTGGTATATTTTGT+AGG + chr7.3:84137218-84137237 MS.gene97229:intron 25.0%
!! ATTTATTCAAGTTAACAGGA+GGG + chr7.3:84136698-84136717 MS.gene97229:CDS 25.0%
!! GATTTATTCAAGTTAATCAG+AGG + chr7.3:84137061-84137080 MS.gene97229:CDS 25.0%
AACATCAGTGACAAATTCTT+TGG - chr7.3:84137398-84137417 None:intergenic 30.0%
AAGCTTGATTTCAAATCCAT+CGG - chr7.3:84137329-84137348 None:intergenic 30.0%
AGCTTAATTTCAAATCCATC+AGG - chr7.3:84136964-84136983 None:intergenic 30.0%
ATATGAAATCAAGCTTCCAT+TGG + chr7.3:84137721-84137740 MS.gene97229:CDS 30.0%
ATCCTACAAAATATACCGAA+AGG - chr7.3:84136859-84136878 None:intergenic 30.0%
GATTTACTCAAGTTAATCAG+AGG + chr7.3:84137425-84137444 MS.gene97229:CDS 30.0%
TAACTTTCTGAATGTCTTGA+AGG + chr7.3:84137095-84137114 MS.gene97229:CDS 30.0%
TGATGCATTACAAGAAACAA+AGG + chr7.3:84136748-84136767 MS.gene97229:CDS 30.0%
TTCTTGAAGGGATTATTTGA+AGG + chr7.3:84136901-84136920 MS.gene97229:CDS 30.0%
! ATCCTTTCGGTATATTTTGT+AGG + chr7.3:84136854-84136873 MS.gene97229:intron 30.0%
! ATTTGAAATCAAGCTTCCAT+CGG + chr7.3:84137333-84137352 MS.gene97229:CDS 30.0%
! GACAAATTCTTTCGCATTTT+TGG - chr7.3:84137025-84137044 None:intergenic 30.0%
! GATTTATTCAAGTTAACAGG+AGG + chr7.3:84136697-84136716 MS.gene97229:CDS 30.0%
!! TAGAATTGATGATGCAAATC+TGG + chr7.3:84137625-84137644 MS.gene97229:intron 30.0%
AACTTCATTGACGAATTCCT+TGG - chr7.3:84136670-84136689 None:intergenic 35.0%
AAGGGATTATTTGAAGGTCA+TGG + chr7.3:84136907-84136926 MS.gene97229:CDS 35.0%
AGAACATTGTGACGTCAAAA+AGG + chr7.3:84136644-84136663 MS.gene97229:CDS 35.0%
AGCTTGATTTCAAATCCATC+GGG - chr7.3:84137328-84137347 None:intergenic 35.0%
AGCTTGATTTCATATCCATC+AGG - chr7.3:84137716-84137735 None:intergenic 35.0%
TGAAATTAAGCTTCCATCTG+AGG + chr7.3:84136972-84136991 MS.gene97229:CDS 35.0%
TGAAGGATTACAAGACACAA+AGG + chr7.3:84137112-84137131 MS.gene97229:CDS 35.0%
TGATTTCATATCCATCAGGT+AGG - chr7.3:84137712-84137731 None:intergenic 35.0%
TTAAACTACTTCCTACCTGA+TGG + chr7.3:84137698-84137717 MS.gene97229:CDS 35.0%
AATTAAGCTTCCATCTGAGG+AGG + chr7.3:84136975-84136994 MS.gene97229:CDS 40.0%
TGAAATCAAGCTTCCATTGG+AGG + chr7.3:84137724-84137743 MS.gene97229:CDS 40.0%
TGAAATTGTTCCTCCTCCAA+TGG - chr7.3:84137740-84137759 None:intergenic 40.0%
TTGAACTACTTCATGCCTGA+TGG + chr7.3:84136946-84136965 MS.gene97229:CDS 40.0%
AATCAAGCTTCCATTGGAGG+AGG + chr7.3:84137727-84137746 MS.gene97229:CDS 45.0%
AGAGATTGTTCCTCCTCAGA+TGG - chr7.3:84136988-84137007 None:intergenic 45.0%
ATCTGAGGAGGAACAATCTC+TGG + chr7.3:84136987-84137006 MS.gene97229:CDS 45.0%
TGAAATCAAGCTTCCATCGG+AGG + chr7.3:84137336-84137355 MS.gene97229:CDS 45.0%
TTGAACTACTTCATGCCCGA+TGG + chr7.3:84137310-84137329 MS.gene97229:CDS 45.0%
TTGTGACGTCAAAAAGGCCA+AGG + chr7.3:84136650-84136669 MS.gene97229:CDS 45.0%
AATCAAGCTTCCATCGGAGG+AGG + chr7.3:84137339-84137358 MS.gene97229:CDS 50.0%
AGAGATTCTTCCTCCTCCGA+TGG - chr7.3:84137352-84137371 None:intergenic 50.0%
AGGATTGACGCTGCGAATCT+TGG + chr7.3:84137238-84137257 MS.gene97229:intron 50.0%
ATCGGAGGAGGAAGAATCTC+TGG + chr7.3:84137351-84137370 MS.gene97229:CDS 50.0%


Chromosome Type Strat End Strand Name
chr7.3 gene 84136627 84137790 84136627 ID=MS.gene97229
chr7.3 mRNA 84136627 84137790 84136627 ID=MS.gene97229.t1;Parent=MS.gene97229
chr7.3 exon 84136627 84136769 84136627 ID=MS.gene97229.t1.exon1;Parent=MS.gene97229.t1
chr7.3 CDS 84136627 84136769 84136627 ID=cds.MS.gene97229.t1;Parent=MS.gene97229.t1
chr7.3 exon 84136876 84137133 84136876 ID=MS.gene97229.t1.exon2;Parent=MS.gene97229.t1
chr7.3 CDS 84136876 84137133 84136876 ID=cds.MS.gene97229.t1;Parent=MS.gene97229.t1
chr7.3 exon 84137240 84137497 84137240 ID=MS.gene97229.t1.exon3;Parent=MS.gene97229.t1
chr7.3 CDS 84137240 84137497 84137240 ID=cds.MS.gene97229.t1;Parent=MS.gene97229.t1
chr7.3 exon 84137628 84137790 84137628 ID=MS.gene97229.t1.exon4;Parent=MS.gene97229.t1
chr7.3 CDS 84137628 84137790 84137628 ID=cds.MS.gene97229.t1;Parent=MS.gene97229.t1
Gene Sequence

>MS.gene97229

ATGGAAGGACATTCTCAAGAACATTGTGACGTCAAAAAGGCCAAGGAATTCGTCAATGAAGTTAAGCATAGATTTATTCAAGTTAACAGGAGGGATAAGTATGTTGATTTTTTGAATGTCTTGATGCATTACAAGAAACAAAGGTTTGATCATGTGTGACCGCTATTTTTTTTATTGTAATGTTAGATTGATTTTATTAAATATTGTTGATTGTAACTAATTTATCTATCCTTTCGGTATATTTTGTAGGATCGATGCTGCAAATCTCAGTAAATTCTTGAAGGGATTATTTGAAGGTCATGGAGATCTTATATCAAGATTGAACTACTTCATGCCTGATGGATTTGAAATTAAGCTTCCATCTGAGGAGGAACAATCTCTGGAGCATTTTGTAGCCAAAAATGCGAAAGAATTTGTCAATGATGTTAGGTGTAGATTTATTCAAGTTAATCAGAGGGAAAAGTATAATAACTTTCTGAATGTCTTGAAGGATTACAAGACACAAAGGTTTGATCATTTGTGACCACTACTTTTTTATTATATTGTGAAATGGATTTTTATTTAATATTGTTGATTGTAACTAATTTATTTATCCTTTTGGTATATTTTGTAGGATTGACGCTGCGAATCTTGGTAAATTATTGAAGGGATTATTTGAAGGTCATAGAGACCTTATATCAAGATTGAACTACTTCATGCCCGATGGATTTGAAATCAAGCTTCCATCGGAGGAGGAAGAATCTCTGGAACATTCTGAAGAAAAAAATGCCAAAGAATTTGTCACTGATGTTAAGTGTAGATTTACTCAAGTTAATCAGAGGGAAAAGTATAATAACTTTCTGAATGTCTTGAAGGATTACAAGACACAAAGGTTTGATCATTTGTGACCACAAATTGTTATTATATTTTGAAATGGATTTTTATTTTTAAAGAATGAAATGGATTCTATTAATTTTTGTTGGTTGTAATTAATTTGTCTATCCATTTGGTATATTTTGTAGAATTGATGATGCAAATCTGGTTAAAATAATGAAGAAAATATTTGAAGGTCACGACGATTTAATATCAAGATTAAACTACTTCCTACCTGATGGATATGAAATCAAGCTTCCATTGGAGGAGGAACAATTTCACTTTAAATTGGAAGATCCTACAAGTATTTGA
Protein sequence

>MS.gene97229.t1

MEGHSQEHCDVKKAKEFVNEVKHRFIQVNRRDKYVDFLNVLMHYKKQRIDAANLSKFLKGLFEGHGDLISRLNYFMPDGFEIKLPSEEEQSLEHFVAKNAKEFVNDVRCRFIQVNQREKYNNFLNVLKDYKTQRIDAANLGKLLKGLFEGHRDLISRLNYFMPDGFEIKLPSEEEESLEHSEEKNAKEFVTDVKCRFTQVNQREKYNNFLNVLKDYKTQRIDDANLVKIMKKIFEGHDDLISRLNYFLPDGYEIKLPLEEEQFHFKLEDPTSI