Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene97660.t1 | KEH29704.1 | 51.7 | 414 | 83 | 2 | 7 | 351 | 146 | 511 | 6.30E-71 | 278.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene97660.t1 | Q9XEC3 | 61.8 | 136 | 50 | 2 | 179 | 312 | 272 | 407 | 1.6e-35 | 151.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene97660.t1 | A0A072UIW3 | 51.7 | 414 | 83 | 2 | 7 | 351 | 146 | 511 | 4.5e-71 | 278.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene97660.t1 | TF | WRKY |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene97660.t1 | MTR_4g049760 | 65.541 | 296 | 50 | 2 | 7 | 300 | 146 | 391 | 4.81e-125 | 372 |
MS.gene97660.t1 | MTR_4g049760 | 54.948 | 384 | 93 | 6 | 49 | 363 | 150 | 522 | 6.23e-112 | 338 |
MS.gene97660.t1 | MTR_4g047580 | 49.892 | 465 | 106 | 8 | 1 | 392 | 130 | 540 | 1.07e-118 | 355 |
MS.gene97660.t1 | MTR_4g049790 | 50.125 | 401 | 127 | 5 | 51 | 392 | 177 | 563 | 9.18e-104 | 318 |
MS.gene97660.t1 | MTR_2g088000 | 48.101 | 237 | 81 | 4 | 96 | 299 | 222 | 449 | 5.76e-61 | 207 |
MS.gene97660.t1 | MTR_4g132430 | 66.142 | 127 | 43 | 0 | 177 | 303 | 105 | 231 | 2.50e-50 | 173 |
MS.gene97660.t1 | MTR_4g132430 | 66.142 | 127 | 43 | 0 | 177 | 303 | 239 | 365 | 3.82e-49 | 173 |
MS.gene97660.t1 | MTR_7g110720 | 45.575 | 226 | 73 | 7 | 184 | 365 | 174 | 393 | 8.46e-49 | 170 |
MS.gene97660.t1 | MTR_7g110720 | 45.575 | 226 | 73 | 7 | 184 | 365 | 201 | 420 | 1.19e-48 | 171 |
MS.gene97660.t1 | MTR_3g053330 | 59.200 | 125 | 51 | 0 | 179 | 303 | 231 | 355 | 1.46e-47 | 168 |
MS.gene97660.t1 | MTR_2g023930 | 44.664 | 253 | 121 | 4 | 97 | 334 | 192 | 440 | 1.33e-46 | 167 |
MS.gene97660.t1 | MTR_2g045360 | 52.941 | 136 | 62 | 2 | 170 | 305 | 182 | 315 | 5.90e-39 | 144 |
MS.gene97660.t1 | MTR_7g009730 | 50.806 | 124 | 55 | 1 | 156 | 273 | 170 | 293 | 2.97e-36 | 139 |
MS.gene97660.t1 | MTR_4g094412 | 58.095 | 105 | 44 | 0 | 184 | 288 | 228 | 332 | 1.18e-33 | 131 |
MS.gene97660.t1 | MTR_4g094412 | 58.095 | 105 | 44 | 0 | 184 | 288 | 219 | 323 | 1.18e-33 | 131 |
MS.gene97660.t1 | MTR_4g107970 | 58.025 | 81 | 34 | 0 | 179 | 259 | 158 | 238 | 7.66e-30 | 120 |
MS.gene97660.t1 | MTR_4g107970 | 58.025 | 81 | 34 | 0 | 179 | 259 | 235 | 315 | 1.19e-29 | 120 |
MS.gene97660.t1 | MTR_4g007060 | 27.869 | 183 | 110 | 2 | 176 | 342 | 105 | 281 | 4.41e-25 | 103 |
MS.gene97660.t1 | MTR_4g007060 | 27.869 | 183 | 110 | 2 | 176 | 342 | 139 | 315 | 6.09e-25 | 103 |
MS.gene97660.t1 | MTR_3g056100 | 40.179 | 112 | 63 | 2 | 169 | 277 | 228 | 338 | 6.30e-23 | 100 |
MS.gene97660.t1 | MTR_3g056100 | 40.179 | 112 | 63 | 2 | 169 | 277 | 241 | 351 | 6.55e-23 | 100 |
MS.gene97660.t1 | MTR_7g011820 | 43.396 | 106 | 49 | 2 | 156 | 261 | 377 | 471 | 7.66e-23 | 100 |
MS.gene97660.t1 | MTR_5g042920 | 43.636 | 110 | 53 | 3 | 156 | 261 | 277 | 381 | 8.22e-23 | 99.8 |
MS.gene97660.t1 | MTR_3g056100 | 40.179 | 112 | 63 | 2 | 169 | 277 | 385 | 495 | 1.04e-22 | 100 |
MS.gene97660.t1 | MTR_3g056100 | 40.179 | 112 | 63 | 2 | 169 | 277 | 372 | 482 | 1.05e-22 | 100 |
MS.gene97660.t1 | MTR_4g094588 | 40.187 | 107 | 63 | 1 | 186 | 292 | 165 | 270 | 1.75e-22 | 97.4 |
MS.gene97660.t1 | MTR_3g106060 | 33.333 | 168 | 70 | 5 | 197 | 340 | 136 | 285 | 2.29e-22 | 96.7 |
MS.gene97660.t1 | MTR_5g044695 | 69.811 | 53 | 16 | 0 | 177 | 229 | 55 | 107 | 2.51e-22 | 91.3 |
MS.gene97660.t1 | MTR_1g013760 | 34.161 | 161 | 99 | 3 | 184 | 343 | 125 | 279 | 3.43e-22 | 95.9 |
MS.gene97660.t1 | MTR_2g105060 | 31.214 | 173 | 104 | 5 | 181 | 342 | 71 | 239 | 5.03e-22 | 94.4 |
MS.gene97660.t1 | MTR_1g013790 | 42.157 | 102 | 46 | 2 | 194 | 295 | 96 | 184 | 5.75e-22 | 94.4 |
MS.gene97660.t1 | MTR_2g105060 | 31.214 | 173 | 104 | 5 | 181 | 342 | 146 | 314 | 1.15e-21 | 94.7 |
MS.gene97660.t1 | MTR_4g013260 | 50.633 | 79 | 38 | 1 | 181 | 259 | 318 | 395 | 4.60e-21 | 95.1 |
MS.gene97660.t1 | MTR_4g013260 | 41.667 | 84 | 42 | 3 | 185 | 266 | 172 | 250 | 8.96e-12 | 67.0 |
MS.gene97660.t1 | MTR_3g009470 | 42.342 | 111 | 61 | 2 | 151 | 261 | 449 | 556 | 5.06e-21 | 95.5 |
MS.gene97660.t1 | MTR_5g094430 | 46.739 | 92 | 46 | 2 | 170 | 261 | 203 | 291 | 5.34e-21 | 94.4 |
MS.gene97660.t1 | MTR_5g094430 | 46.739 | 92 | 46 | 2 | 170 | 261 | 225 | 313 | 5.60e-21 | 94.4 |
MS.gene97660.t1 | MTR_6g038890 | 69.811 | 53 | 16 | 0 | 177 | 229 | 166 | 218 | 7.43e-21 | 90.5 |
MS.gene97660.t1 | MTR_4g082580 | 45.679 | 81 | 43 | 1 | 181 | 261 | 260 | 339 | 1.05e-20 | 93.2 |
MS.gene97660.t1 | MTR_5g094430 | 46.739 | 92 | 46 | 2 | 170 | 261 | 337 | 425 | 1.10e-20 | 94.4 |
MS.gene97660.t1 | MTR_7g109800 | 42.553 | 94 | 49 | 2 | 184 | 277 | 130 | 218 | 1.15e-20 | 91.7 |
MS.gene97660.t1 | MTR_7g071120 | 50.617 | 81 | 39 | 1 | 181 | 261 | 306 | 385 | 1.92e-20 | 93.2 |
MS.gene97660.t1 | MTR_1g086790 | 40.196 | 102 | 56 | 2 | 184 | 285 | 143 | 239 | 2.20e-20 | 91.3 |
MS.gene97660.t1 | MTR_3g031220 | 41.414 | 99 | 57 | 1 | 161 | 259 | 327 | 424 | 5.08e-20 | 92.0 |
MS.gene97660.t1 | MTR_3g031220 | 40.000 | 80 | 42 | 3 | 184 | 263 | 187 | 260 | 3.01e-11 | 65.1 |
MS.gene97660.t1 | MTR_7g028415 | 50.704 | 71 | 34 | 1 | 188 | 258 | 82 | 151 | 6.78e-20 | 86.7 |
MS.gene97660.t1 | MTR_7g028710 | 50.704 | 71 | 34 | 1 | 188 | 258 | 82 | 151 | 6.78e-20 | 86.7 |
MS.gene97660.t1 | MTR_7g080000 | 46.067 | 89 | 42 | 2 | 178 | 261 | 406 | 493 | 8.62e-20 | 91.7 |
MS.gene97660.t1 | MTR_7g079010 | 40.777 | 103 | 57 | 2 | 178 | 280 | 120 | 218 | 1.00e-19 | 87.4 |
MS.gene97660.t1 | MTR_3g104750 | 48.611 | 72 | 36 | 1 | 186 | 257 | 91 | 161 | 1.15e-19 | 85.9 |
MS.gene97660.t1 | MTR_7g109600 | 42.424 | 99 | 52 | 2 | 178 | 274 | 30 | 125 | 1.31e-19 | 88.2 |
MS.gene97660.t1 | MTR_5g074400 | 41.935 | 93 | 53 | 1 | 169 | 261 | 390 | 481 | 1.34e-19 | 90.9 |
MS.gene97660.t1 | MTR_1g015140 | 48.000 | 75 | 38 | 1 | 183 | 257 | 86 | 159 | 1.37e-19 | 85.5 |
MS.gene97660.t1 | MTR_2g033820 | 43.750 | 80 | 44 | 1 | 184 | 263 | 188 | 266 | 1.71e-19 | 89.7 |
MS.gene97660.t1 | MTR_7g080020 | 47.436 | 78 | 40 | 1 | 184 | 261 | 478 | 554 | 1.98e-19 | 90.9 |
MS.gene97660.t1 | MTR_5g097490 | 49.351 | 77 | 38 | 1 | 184 | 260 | 237 | 312 | 3.34e-19 | 89.0 |
MS.gene97660.t1 | MTR_8g096730 | 36.190 | 105 | 66 | 1 | 158 | 262 | 29 | 132 | 3.91e-19 | 84.0 |
MS.gene97660.t1 | MTR_1g077780 | 47.436 | 78 | 40 | 1 | 184 | 261 | 47 | 123 | 1.09e-18 | 82.4 |
MS.gene97660.t1 | MTR_4g122530 | 43.038 | 79 | 44 | 1 | 185 | 263 | 194 | 271 | 4.72e-18 | 85.9 |
MS.gene97660.t1 | MTR_2g032030 | 31.792 | 173 | 98 | 5 | 116 | 269 | 166 | 337 | 6.51e-18 | 85.5 |
MS.gene97660.t1 | MTR_2g032030 | 46.667 | 75 | 40 | 0 | 195 | 269 | 263 | 337 | 1.23e-17 | 84.3 |
MS.gene97660.t1 | MTR_5g043880 | 31.646 | 158 | 101 | 3 | 179 | 336 | 104 | 254 | 1.44e-17 | 82.4 |
MS.gene97660.t1 | MTR_7g100510 | 43.210 | 81 | 45 | 1 | 179 | 259 | 341 | 420 | 1.69e-17 | 84.3 |
MS.gene97660.t1 | MTR_8g028565 | 49.333 | 75 | 38 | 0 | 195 | 269 | 151 | 225 | 1.97e-17 | 83.2 |
MS.gene97660.t1 | MTR_8g098945 | 47.222 | 72 | 38 | 0 | 198 | 269 | 128 | 199 | 6.60e-17 | 80.5 |
MS.gene97660.t1 | MTR_7g079040 | 48.000 | 75 | 39 | 0 | 195 | 269 | 150 | 224 | 7.87e-17 | 81.3 |
MS.gene97660.t1 | MTR_5g091390 | 36.441 | 118 | 67 | 2 | 186 | 296 | 144 | 260 | 1.02e-16 | 80.5 |
MS.gene97660.t1 | MTR_8g087000 | 48.485 | 66 | 34 | 0 | 196 | 261 | 74 | 139 | 1.46e-16 | 79.0 |
MS.gene97660.t1 | MTR_8g087000 | 48.485 | 66 | 34 | 0 | 196 | 261 | 73 | 138 | 1.50e-16 | 79.0 |
MS.gene97660.t1 | MTR_1g009613 | 45.349 | 86 | 45 | 1 | 183 | 266 | 244 | 329 | 1.79e-16 | 80.1 |
MS.gene97660.t1 | MTR_8g092010 | 43.243 | 74 | 41 | 1 | 186 | 259 | 95 | 167 | 2.37e-16 | 77.0 |
MS.gene97660.t1 | MTR_2g083870 | 50.000 | 72 | 34 | 1 | 190 | 259 | 71 | 142 | 3.82e-16 | 78.2 |
MS.gene97660.t1 | MTR_2g024350 | 42.857 | 77 | 44 | 0 | 194 | 270 | 3 | 79 | 4.30e-16 | 77.4 |
MS.gene97660.t1 | MTR_3g095040 | 42.500 | 80 | 45 | 1 | 180 | 259 | 99 | 177 | 6.13e-16 | 76.3 |
MS.gene97660.t1 | MTR_1g099600 | 41.053 | 95 | 54 | 1 | 195 | 289 | 181 | 273 | 6.93e-16 | 78.2 |
MS.gene97660.t1 | MTR_2g016770 | 48.438 | 64 | 33 | 0 | 196 | 259 | 32 | 95 | 7.32e-16 | 76.3 |
MS.gene97660.t1 | MTR_2g016770 | 48.438 | 64 | 33 | 0 | 196 | 259 | 24 | 87 | 8.61e-16 | 75.9 |
MS.gene97660.t1 | MTR_3g095080 | 38.298 | 94 | 56 | 2 | 184 | 277 | 129 | 220 | 2.69e-15 | 74.7 |
MS.gene97660.t1 | MTR_8g007270 | 43.038 | 79 | 44 | 1 | 178 | 256 | 133 | 210 | 3.85e-15 | 74.7 |
MS.gene97660.t1 | MTR_1g078260 | 48.611 | 72 | 35 | 2 | 186 | 256 | 234 | 304 | 3.88e-15 | 77.0 |
MS.gene97660.t1 | MTR_3g095080 | 41.379 | 87 | 49 | 2 | 184 | 270 | 153 | 237 | 4.87e-15 | 74.7 |
MS.gene97660.t1 | MTR_4g130900 | 42.500 | 80 | 45 | 1 | 184 | 263 | 344 | 422 | 5.44e-15 | 76.6 |
MS.gene97660.t1 | MTR_2g024380 | 42.857 | 77 | 44 | 0 | 194 | 270 | 246 | 322 | 5.57e-15 | 76.6 |
MS.gene97660.t1 | MTR_5g016610 | 50.000 | 60 | 30 | 0 | 199 | 258 | 199 | 258 | 7.83e-15 | 74.3 |
MS.gene97660.t1 | MTR_4g094908 | 48.387 | 62 | 32 | 0 | 200 | 261 | 267 | 328 | 1.05e-14 | 75.1 |
MS.gene97660.t1 | MTR_1g070455 | 50.877 | 57 | 28 | 0 | 200 | 256 | 294 | 350 | 1.69e-14 | 74.7 |
MS.gene97660.t1 | MTR_8g092140 | 45.946 | 74 | 38 | 2 | 197 | 270 | 158 | 229 | 1.06e-13 | 70.5 |
MS.gene97660.t1 | MTR_6g086555 | 42.169 | 83 | 46 | 2 | 183 | 264 | 190 | 271 | 3.35e-13 | 70.9 |
MS.gene97660.t1 | MTR_4g127040 | 42.105 | 76 | 42 | 1 | 183 | 256 | 227 | 302 | 3.80e-13 | 70.1 |
MS.gene97660.t1 | MTR_7g062220 | 41.379 | 87 | 49 | 2 | 200 | 285 | 125 | 210 | 6.34e-12 | 66.6 |
MS.gene97660.t1 | MTR_4g007060 | 36.066 | 61 | 39 | 0 | 176 | 236 | 139 | 199 | 7.71e-12 | 65.1 |
MS.gene97660.t1 | MTR_2g075750 | 31.690 | 142 | 83 | 4 | 181 | 320 | 10 | 139 | 1.51e-11 | 63.2 |
MS.gene97660.t1 | MTR_3g031220 | 40.000 | 80 | 42 | 3 | 184 | 263 | 187 | 260 | 1.76e-11 | 65.5 |
MS.gene97660.t1 | MTR_3g108960 | 32.292 | 96 | 58 | 1 | 161 | 256 | 283 | 371 | 2.37e-11 | 65.1 |
MS.gene97660.t1 | MTR_0117s0040 | 29.907 | 107 | 66 | 2 | 150 | 256 | 34 | 131 | 2.88e-11 | 63.5 |
MS.gene97660.t1 | MTR_5g097500 | 30.612 | 98 | 65 | 2 | 165 | 260 | 194 | 290 | 3.51e-11 | 64.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene97660.t1 | AT4G04450 | 68.504 | 127 | 38 | 2 | 179 | 303 | 178 | 304 | 2.41e-55 | 188 |
MS.gene97660.t1 | AT4G04450 | 68.504 | 127 | 38 | 2 | 179 | 303 | 272 | 398 | 1.48e-54 | 188 |
MS.gene97660.t1 | AT1G62300 | 66.142 | 127 | 42 | 1 | 178 | 303 | 291 | 417 | 7.80e-48 | 171 |
MS.gene97660.t1 | AT4G22070 | 67.460 | 126 | 40 | 1 | 179 | 303 | 277 | 402 | 4.41e-43 | 158 |
MS.gene97660.t1 | AT4G22070 | 67.460 | 126 | 40 | 1 | 179 | 303 | 277 | 402 | 4.41e-43 | 158 |
MS.gene97660.t1 | AT4G22070 | 67.460 | 126 | 40 | 1 | 179 | 303 | 277 | 402 | 4.41e-43 | 158 |
MS.gene97660.t1 | AT4G22070 | 67.460 | 126 | 40 | 1 | 179 | 303 | 277 | 402 | 4.41e-43 | 158 |
MS.gene97660.t1 | AT1G68150 | 44.737 | 152 | 70 | 2 | 143 | 280 | 165 | 316 | 2.91e-37 | 139 |
MS.gene97660.t1 | AT5G15130 | 63.333 | 90 | 33 | 0 | 184 | 273 | 170 | 259 | 3.04e-36 | 138 |
MS.gene97660.t1 | AT5G15130 | 63.333 | 90 | 33 | 0 | 184 | 273 | 212 | 301 | 4.28e-36 | 139 |
MS.gene97660.t1 | AT4G01720 | 31.864 | 295 | 128 | 6 | 114 | 337 | 151 | 443 | 1.78e-35 | 136 |
MS.gene97660.t1 | AT1G69810 | 55.340 | 103 | 45 | 1 | 172 | 273 | 118 | 220 | 1.76e-31 | 122 |
MS.gene97660.t1 | AT1G69810 | 55.340 | 103 | 45 | 1 | 172 | 273 | 176 | 278 | 3.22e-31 | 122 |
MS.gene97660.t1 | AT1G18860 | 60.638 | 94 | 37 | 0 | 184 | 277 | 224 | 317 | 1.64e-30 | 122 |
MS.gene97660.t1 | AT1G80840 | 32.571 | 175 | 98 | 7 | 179 | 337 | 121 | 291 | 1.53e-23 | 100 |
MS.gene97660.t1 | AT4G26640 | 51.163 | 86 | 37 | 2 | 180 | 261 | 182 | 266 | 8.51e-23 | 99.4 |
MS.gene97660.t1 | AT4G26640 | 51.163 | 86 | 37 | 2 | 180 | 261 | 182 | 266 | 8.51e-23 | 99.4 |
MS.gene97660.t1 | AT4G26640 | 51.163 | 86 | 37 | 2 | 180 | 261 | 182 | 266 | 8.51e-23 | 99.4 |
MS.gene97660.t1 | AT4G26640 | 51.163 | 86 | 37 | 2 | 180 | 261 | 182 | 266 | 8.51e-23 | 99.4 |
MS.gene97660.t1 | AT4G26640 | 51.163 | 86 | 37 | 2 | 180 | 261 | 286 | 370 | 2.07e-22 | 99.0 |
MS.gene97660.t1 | AT4G26640 | 51.163 | 86 | 37 | 2 | 180 | 261 | 318 | 402 | 2.31e-22 | 99.4 |
MS.gene97660.t1 | AT4G26640 | 51.163 | 86 | 37 | 2 | 180 | 261 | 358 | 442 | 2.35e-22 | 99.4 |
MS.gene97660.t1 | AT5G13080 | 52.055 | 73 | 34 | 1 | 186 | 258 | 54 | 125 | 3.04e-22 | 92.4 |
MS.gene97660.t1 | AT1G64000 | 43.269 | 104 | 54 | 2 | 181 | 284 | 96 | 194 | 4.72e-22 | 93.2 |
MS.gene97660.t1 | AT1G13960 | 49.367 | 79 | 39 | 1 | 181 | 259 | 238 | 315 | 4.84e-22 | 96.7 |
MS.gene97660.t1 | AT5G41570 | 43.000 | 100 | 52 | 2 | 185 | 284 | 84 | 178 | 7.82e-22 | 92.0 |
MS.gene97660.t1 | AT1G13960 | 49.367 | 79 | 39 | 1 | 181 | 259 | 391 | 468 | 9.35e-22 | 97.4 |
MS.gene97660.t1 | AT4G18170 | 51.948 | 77 | 36 | 1 | 184 | 260 | 157 | 232 | 4.35e-21 | 93.2 |
MS.gene97660.t1 | AT2G03340 | 38.793 | 116 | 61 | 2 | 146 | 261 | 371 | 476 | 5.06e-21 | 95.1 |
MS.gene97660.t1 | AT5G07100 | 45.882 | 85 | 45 | 1 | 179 | 263 | 121 | 204 | 1.59e-20 | 89.7 |
MS.gene97660.t1 | AT5G07100 | 45.882 | 85 | 45 | 1 | 179 | 263 | 121 | 204 | 1.59e-20 | 89.7 |
MS.gene97660.t1 | AT5G07100 | 45.882 | 85 | 45 | 1 | 179 | 263 | 121 | 204 | 1.59e-20 | 89.7 |
MS.gene97660.t1 | AT5G07100 | 45.882 | 85 | 45 | 1 | 179 | 263 | 121 | 204 | 1.59e-20 | 89.7 |
MS.gene97660.t1 | AT1G29860 | 42.553 | 94 | 49 | 2 | 184 | 277 | 121 | 209 | 1.65e-20 | 90.9 |
MS.gene97660.t1 | AT2G25000 | 29.143 | 175 | 113 | 1 | 99 | 262 | 14 | 188 | 2.71e-20 | 89.7 |
MS.gene97660.t1 | AT5G56270 | 48.750 | 80 | 40 | 1 | 182 | 261 | 470 | 548 | 3.02e-20 | 93.2 |
MS.gene97660.t1 | AT5G46350 | 50.667 | 75 | 36 | 1 | 186 | 260 | 170 | 243 | 3.43e-20 | 90.9 |
MS.gene97660.t1 | AT3G01080 | 44.318 | 88 | 45 | 2 | 175 | 259 | 317 | 403 | 3.48e-20 | 92.4 |
MS.gene97660.t1 | AT2G38470 | 46.914 | 81 | 42 | 1 | 181 | 261 | 344 | 423 | 3.74e-20 | 92.4 |
MS.gene97660.t1 | AT2G25000 | 37.500 | 104 | 65 | 0 | 159 | 262 | 63 | 166 | 4.15e-20 | 88.6 |
MS.gene97660.t1 | AT2G25000 | 37.500 | 104 | 65 | 0 | 159 | 262 | 63 | 166 | 4.15e-20 | 88.6 |
MS.gene97660.t1 | AT5G07100 | 45.882 | 85 | 45 | 1 | 179 | 263 | 214 | 297 | 4.27e-20 | 90.5 |
MS.gene97660.t1 | AT3G01080 | 44.318 | 88 | 45 | 2 | 175 | 259 | 279 | 365 | 4.83e-20 | 91.7 |
MS.gene97660.t1 | AT2G25000 | 37.500 | 104 | 65 | 0 | 159 | 262 | 106 | 209 | 7.12e-20 | 89.0 |
MS.gene97660.t1 | AT2G30250 | 47.500 | 80 | 41 | 1 | 184 | 263 | 313 | 391 | 8.06e-20 | 90.9 |
MS.gene97660.t1 | AT5G49520 | 43.750 | 80 | 44 | 1 | 184 | 263 | 206 | 284 | 1.01e-19 | 90.5 |
MS.gene97660.t1 | AT4G31800 | 39.048 | 105 | 59 | 1 | 178 | 277 | 85 | 189 | 1.54e-19 | 87.4 |
MS.gene97660.t1 | AT4G31800 | 44.706 | 85 | 42 | 1 | 184 | 263 | 156 | 240 | 2.40e-19 | 88.2 |
MS.gene97660.t1 | AT2G04880 | 40.659 | 91 | 53 | 1 | 169 | 259 | 253 | 342 | 2.50e-19 | 89.7 |
MS.gene97660.t1 | AT2G04880 | 49.254 | 67 | 32 | 2 | 195 | 261 | 107 | 171 | 3.10e-12 | 68.2 |
MS.gene97660.t1 | AT2G04880 | 40.659 | 91 | 53 | 1 | 169 | 259 | 277 | 366 | 3.74e-19 | 89.4 |
MS.gene97660.t1 | AT2G04880 | 49.254 | 67 | 32 | 2 | 195 | 261 | 107 | 171 | 4.04e-12 | 68.2 |
MS.gene97660.t1 | AT5G52830 | 48.052 | 77 | 40 | 0 | 193 | 269 | 159 | 235 | 7.87e-19 | 87.4 |
MS.gene97660.t1 | AT3G01970 | 50.000 | 72 | 35 | 1 | 185 | 256 | 51 | 121 | 1.05e-18 | 82.8 |
MS.gene97660.t1 | AT5G26170 | 47.887 | 71 | 36 | 1 | 186 | 256 | 100 | 169 | 1.52e-18 | 82.8 |
MS.gene97660.t1 | AT2G47260 | 43.373 | 83 | 46 | 1 | 184 | 266 | 159 | 240 | 1.91e-18 | 85.9 |
MS.gene97660.t1 | AT2G34830 | 35.766 | 137 | 74 | 3 | 183 | 305 | 198 | 334 | 3.54e-18 | 86.3 |
MS.gene97660.t1 | AT2G34830 | 35.766 | 137 | 74 | 3 | 183 | 305 | 207 | 343 | 4.47e-18 | 85.9 |
MS.gene97660.t1 | AT4G26440 | 46.154 | 78 | 41 | 1 | 184 | 261 | 357 | 433 | 9.20e-18 | 85.5 |
MS.gene97660.t1 | AT3G62340 | 48.000 | 75 | 38 | 1 | 185 | 259 | 104 | 177 | 1.01e-17 | 83.2 |
MS.gene97660.t1 | AT2G46130 | 48.611 | 72 | 36 | 1 | 186 | 257 | 17 | 87 | 2.01e-17 | 77.8 |
MS.gene97660.t1 | AT5G45050 | 34.591 | 159 | 95 | 4 | 149 | 305 | 1108 | 1259 | 4.00e-17 | 84.0 |
MS.gene97660.t1 | AT5G45050 | 34.591 | 159 | 95 | 4 | 149 | 305 | 997 | 1148 | 4.20e-17 | 84.0 |
MS.gene97660.t1 | AT5G45050 | 34.591 | 159 | 95 | 4 | 149 | 305 | 1136 | 1287 | 4.44e-17 | 84.0 |
MS.gene97660.t1 | AT1G29280 | 47.143 | 70 | 37 | 0 | 190 | 259 | 65 | 134 | 5.05e-17 | 80.5 |
MS.gene97660.t1 | AT1G30650 | 42.353 | 85 | 48 | 1 | 183 | 266 | 200 | 284 | 5.16e-17 | 82.8 |
MS.gene97660.t1 | AT3G58710 | 40.000 | 90 | 50 | 1 | 177 | 262 | 45 | 134 | 5.90e-17 | 80.9 |
MS.gene97660.t1 | AT3G58710 | 40.000 | 90 | 50 | 1 | 177 | 262 | 44 | 133 | 6.10e-17 | 80.5 |
MS.gene97660.t1 | AT4G23550 | 46.154 | 78 | 42 | 0 | 194 | 271 | 135 | 212 | 1.53e-16 | 80.1 |
MS.gene97660.t1 | AT1G55600 | 44.737 | 76 | 41 | 1 | 186 | 261 | 294 | 368 | 1.53e-16 | 81.6 |
MS.gene97660.t1 | AT4G01250 | 46.667 | 75 | 40 | 0 | 195 | 269 | 124 | 198 | 1.88e-16 | 79.7 |
MS.gene97660.t1 | AT1G69310 | 42.667 | 75 | 42 | 1 | 182 | 256 | 130 | 203 | 1.91e-16 | 79.3 |
MS.gene97660.t1 | AT1G69310 | 42.667 | 75 | 42 | 1 | 182 | 256 | 130 | 203 | 1.91e-16 | 79.3 |
MS.gene97660.t1 | AT1G69310 | 42.667 | 75 | 42 | 1 | 182 | 256 | 130 | 203 | 1.91e-16 | 79.3 |
MS.gene97660.t1 | AT4G30935 | 34.746 | 118 | 72 | 2 | 167 | 284 | 299 | 411 | 6.01e-16 | 79.7 |
MS.gene97660.t1 | AT5G64810 | 47.887 | 71 | 36 | 1 | 186 | 256 | 97 | 166 | 6.11e-16 | 76.3 |
MS.gene97660.t1 | AT2G23320 | 52.542 | 59 | 28 | 0 | 200 | 258 | 241 | 299 | 8.01e-16 | 78.2 |
MS.gene97660.t1 | AT2G30590 | 51.562 | 64 | 30 | 1 | 200 | 262 | 314 | 377 | 8.89e-16 | 78.6 |
MS.gene97660.t1 | AT2G44745 | 40.506 | 79 | 46 | 1 | 178 | 256 | 124 | 201 | 1.01e-14 | 73.2 |
MS.gene97660.t1 | AT4G39410 | 45.205 | 73 | 39 | 1 | 184 | 256 | 208 | 279 | 1.55e-14 | 74.3 |
MS.gene97660.t1 | AT5G28650 | 50.877 | 57 | 28 | 0 | 200 | 256 | 263 | 319 | 2.00e-14 | 74.3 |
MS.gene97660.t1 | AT2G24570 | 52.632 | 57 | 27 | 0 | 200 | 256 | 244 | 300 | 2.23e-14 | 73.9 |
MS.gene97660.t1 | AT4G24240 | 50.000 | 60 | 30 | 0 | 199 | 258 | 281 | 340 | 3.05e-14 | 73.9 |
MS.gene97660.t1 | AT3G04670 | 50.877 | 57 | 28 | 0 | 200 | 256 | 263 | 319 | 4.05e-14 | 73.2 |
MS.gene97660.t1 | AT2G46130 | 38.462 | 91 | 47 | 3 | 186 | 276 | 17 | 98 | 5.76e-14 | 68.2 |
MS.gene97660.t1 | AT4G31550 | 50.877 | 57 | 28 | 0 | 200 | 256 | 247 | 303 | 7.38e-14 | 72.4 |
MS.gene97660.t1 | AT4G31550 | 50.877 | 57 | 28 | 0 | 200 | 256 | 246 | 302 | 7.38e-14 | 72.4 |
MS.gene97660.t1 | AT2G37260 | 50.769 | 65 | 31 | 1 | 194 | 258 | 262 | 325 | 8.62e-14 | 72.4 |
MS.gene97660.t1 | AT2G37260 | 50.769 | 65 | 31 | 1 | 194 | 258 | 264 | 327 | 8.90e-14 | 72.4 |
MS.gene97660.t1 | AT2G21900 | 30.435 | 115 | 74 | 3 | 148 | 262 | 63 | 171 | 1.14e-13 | 69.7 |
MS.gene97660.t1 | AT2G37260 | 50.769 | 65 | 31 | 1 | 194 | 258 | 344 | 407 | 1.17e-13 | 72.4 |
MS.gene97660.t1 | AT5G45260 | 41.935 | 93 | 48 | 2 | 183 | 273 | 1196 | 1284 | 2.72e-13 | 72.4 |
MS.gene97660.t1 | AT5G43290 | 30.075 | 133 | 90 | 3 | 125 | 256 | 40 | 170 | 2.45e-11 | 64.3 |
Find 72 sgRNAs with CRISPR-Local
Find 134 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GAAGTTTCTGATGGAAAATT+TGG | 0.152030 | 4.4:+49015746 | MS.gene97660:CDS |
GACAAAGATGCAAGAAAATT+TGG | 0.170415 | 4.4:-49017779 | None:intergenic |
CTTTAACTTCCTTAAACTTA+TGG | 0.217911 | 4.4:-49015604 | None:intergenic |
CCTAACTGGTCCTGACTTCT+AGG | 0.238769 | 4.4:-49016010 | None:intergenic |
TGCTGGATTGACTACTATTA+AGG | 0.246157 | 4.4:+49015823 | MS.gene97660:CDS |
TTAACTGCCTGAGCAATATT+TGG | 0.250376 | 4.4:-49017737 | None:intergenic |
ATTAAGGTTAAGGAAGTTAA+AGG | 0.251785 | 4.4:+49015839 | MS.gene97660:CDS |
GATGCTAGACCATAAGTTTA+AGG | 0.251852 | 4.4:+49015595 | MS.gene97660:CDS |
CCTGCTCTTACTTCCATTAT+TGG | 0.259720 | 4.4:+49017803 | MS.gene97660:CDS |
CATAAGTTTAAGGAAGTTAA+AGG | 0.270958 | 4.4:+49015605 | MS.gene97660:CDS |
CTGCAACGATAATAAGATTT+AGG | 0.288563 | 4.4:-49016324 | None:intergenic |
TCTTGAATCGACTACTAATA+AGG | 0.356966 | 4.4:+49015703 | MS.gene97660:CDS |
TGGAAAATTTAAAGAGAAAG+AGG | 0.366446 | 4.4:+49015643 | MS.gene97660:CDS |
GGACGTCAATGGAGAAAGTT+TGG | 0.369208 | 4.4:+49016273 | MS.gene97660:CDS |
TCTACTGATAATAATAATAA+TGG | 0.369777 | 4.4:+49017854 | MS.gene97660:CDS |
AAAACGAAATTTGTTGATGC+TGG | 0.383384 | 4.4:+49015806 | MS.gene97660:CDS |
AAAGGAAAAGAATTCTTTGA+TGG | 0.389164 | 4.4:+49015623 | MS.gene97660:CDS |
ATTGACTACTATTAAGGTTA+AGG | 0.403986 | 4.4:+49015829 | MS.gene97660:CDS |
AGCTAGATCAGAAGAAACTA+TGG | 0.417776 | 4.4:+49016147 | MS.gene97660:CDS |
ATCGACTACTAATAAGGTTA+AGG | 0.426837 | 4.4:+49015709 | MS.gene97660:CDS |
CTTTGGCTGCAGTAGGTAAA+GGG | 0.427084 | 4.4:-49017364 | None:intergenic |
ACCTACTGCAGCCAAAGAAA+TGG | 0.440244 | 4.4:+49017370 | MS.gene97660:CDS |
TAACATCTGCATTCTTACTA+AGG | 0.441748 | 4.4:-49016075 | None:intergenic |
TCTTTGGCTGCAGTAGGTAA+AGG | 0.441950 | 4.4:-49017365 | None:intergenic |
TGGTTGCTCAATCCGAAAAC+AGG | 0.447438 | 4.4:+49016356 | MS.gene97660:CDS |
TGCCTGAGTATGACCAATAA+TGG | 0.460348 | 4.4:-49017816 | None:intergenic |
CCTAGAAGTCAGGACCAGTT+AGG | 0.461756 | 4.4:+49016010 | MS.gene97660:CDS |
GAGAAAGAGGGAACTGAGAA+TGG | 0.465364 | 4.4:+49015656 | MS.gene97660:CDS |
GCTATCATTGTGATTTCCTT+CGG | 0.473387 | 4.4:-49017888 | None:intergenic |
ACAAGATCTTTGCATTGCCT+TGG | 0.476445 | 4.4:-49015926 | None:intergenic |
AATGAGAAAACCTAGAAGTC+AGG | 0.488123 | 4.4:+49016000 | MS.gene97660:CDS |
AAGCATCGAGGTTGCTTCGA+AGG | 0.510775 | 4.4:+49016045 | MS.gene97660:CDS |
AAAGAGGGAACTGAGAATGG+TGG | 0.516698 | 4.4:+49015659 | MS.gene97660:CDS |
TTCCATTATTGGTCATACTC+AGG | 0.517830 | 4.4:+49017814 | MS.gene97660:CDS |
AGCAGTACCAAATATTGCTC+AGG | 0.521712 | 4.4:+49017730 | MS.gene97660:CDS |
TTATTGTGTTAGATCACTGA+TGG | 0.523541 | 4.4:+49016252 | MS.gene97660:intron |
GGAAAATTTAAAGAGAAAGA+GGG | 0.534243 | 4.4:+49015644 | MS.gene97660:CDS |
ACAAGGAAGGAGTGTTCTTG+TGG | 0.534307 | 4.4:-49017474 | None:intergenic |
AAAGAACAAGAAGTTTCTGA+TGG | 0.535951 | 4.4:+49015737 | MS.gene97660:CDS |
AAAATTTGGATTAGCAGCAA+TGG | 0.542627 | 4.4:-49017765 | None:intergenic |
GTTGTAATCACAACTTATGA+AGG | 0.543545 | 4.4:+49017329 | MS.gene97660:CDS |
GGTACTGCTAATAATTGTGA+AGG | 0.548903 | 4.4:-49017716 | None:intergenic |
GTCGATTCAAGATCTTTCCT+CGG | 0.549164 | 4.4:-49015692 | None:intergenic |
CGATAATAAGATTTAGGACA+CGG | 0.550453 | 4.4:-49016318 | None:intergenic |
TATCGTTGCAGCATGGCCCA+TGG | 0.558580 | 4.4:+49016336 | MS.gene97660:CDS |
AATAACAATGGTAATATCAC+AGG | 0.561708 | 4.4:+49017932 | MS.gene97660:CDS |
AGATCACTGATGGACGTCAA+TGG | 0.561738 | 4.4:+49016262 | MS.gene97660:intron |
CAAGGAAGGAGTGTTCTTGT+GGG | 0.564200 | 4.4:-49017473 | None:intergenic |
CCAATAATGGAAGTAAGAGC+AGG | 0.573308 | 4.4:-49017803 | None:intergenic |
TAGCAACACTAATGATCAGA+AGG | 0.581418 | 4.4:+49017955 | MS.gene97660:CDS |
GCCATTTCTTTGGCTGCAGT+AGG | 0.583103 | 4.4:-49017371 | None:intergenic |
AGCAACAATAATGTCACAGA+AGG | 0.584455 | 4.4:+49017908 | MS.gene97660:CDS |
ATGGTGGAGTACTGAGGCCG+AGG | 0.584737 | 4.4:+49015675 | MS.gene97660:CDS |
ATCTTATTATCGTTGCAGCA+TGG | 0.591100 | 4.4:+49016329 | MS.gene97660:CDS |
GTACTGCTAATAATTGTGAA+GGG | 0.593217 | 4.4:-49017715 | None:intergenic |
ATGGTGGAGAGTTGGTGCCA+AGG | 0.595504 | 4.4:+49015909 | MS.gene97660:CDS |
TTCAAACTTAATAGGTACAA+AGG | 0.596299 | 4.4:+49017288 | MS.gene97660:intron |
GCATCAACATCAAGCAATGG+TGG | 0.602123 | 4.4:+49017431 | MS.gene97660:CDS |
TACTAATGCTGAGACTGCGA+TGG | 0.603405 | 4.4:+49015955 | MS.gene97660:CDS |
ACTTGAGAATGGTGGAGAGT+TGG | 0.607530 | 4.4:+49015901 | MS.gene97660:CDS |
AAGTCAGGACCAGTTAGGAT+CGG | 0.622675 | 4.4:+49016015 | MS.gene97660:CDS |
AATGGCAACAATGTCACCGA+AGG | 0.626879 | 4.4:+49017872 | MS.gene97660:CDS |
TGGCTGCAGTAGGTAAAGGG+TGG | 0.628113 | 4.4:-49017361 | None:intergenic |
AAATACTTGAAGAACAAGGA+AGG | 0.629779 | 4.4:-49017487 | None:intergenic |
GATAATAAGATTTAGGACAC+GGG | 0.635710 | 4.4:-49016317 | None:intergenic |
GTCACAGAAGGCAATAACAA+TGG | 0.641704 | 4.4:+49017920 | MS.gene97660:CDS |
TCAGCATCAACATCAAGCAA+TGG | 0.645156 | 4.4:+49017428 | MS.gene97660:CDS |
CTGAGAATGGTGGAGTACTG+AGG | 0.679110 | 4.4:+49015669 | MS.gene97660:CDS |
CATCTCGAAACACATCCGCA+TGG | 0.680321 | 4.4:-49015576 | None:intergenic |
GTTGAAATACTTGAAGAACA+AGG | 0.687606 | 4.4:-49017491 | None:intergenic |
TGATAATGTTGAGACAACAT+TGG | 0.697860 | 4.4:+49016102 | MS.gene97660:CDS |
ATCGGCGATGAAAAGCATCG+AGG | 0.778036 | 4.4:+49016033 | MS.gene97660:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ACAATAAAAATAAATTCTTT+AGG | - | chr4.4:49016239-49016258 | None:intergenic | 10.0% |
!! | AATAGAATTTAATTCAAATG+TGG | + | chr4.4:49016969-49016988 | MS.gene97660:intron | 15.0% |
!! | TAATACAATTCAAACTTAAT+AGG | + | chr4.4:49017280-49017299 | MS.gene97660:intron | 15.0% |
!! | TAATTAAAATACTTATGGAA+TGG | + | chr4.4:49017232-49017251 | MS.gene97660:intron | 15.0% |
!! | TAGGTTAATTAAAATACTTA+TGG | + | chr4.4:49017227-49017246 | MS.gene97660:intron | 15.0% |
!! | TCTACTGATAATAATAATAA+TGG | + | chr4.4:49017854-49017873 | MS.gene97660:CDS | 15.0% |
!!! | ATGCATATTTTGATTTTTAA+TGG | - | chr4.4:49017090-49017109 | None:intergenic | 15.0% |
!! | AAAATGATGATTAAATGACA+AGG | - | chr4.4:49016856-49016875 | None:intergenic | 20.0% |
!!! | AAAGGAAAAGAAGTTTTTAA+TGG | + | chr4.4:49015857-49015876 | MS.gene97660:CDS | 20.0% |
!!! | AATTTTGATTGGTTTTGATT+AGG | - | chr4.4:49017662-49017681 | None:intergenic | 20.0% |
! | AAAAAGAGAATAAAGAATGG+TGG | + | chr4.4:49015773-49015792 | MS.gene97660:CDS | 25.0% |
! | AAAGGAAAAGAATTCTTTGA+TGG | + | chr4.4:49015623-49015642 | MS.gene97660:CDS | 25.0% |
! | AATAAATTCTTTAGGCGAAA+AGG | - | chr4.4:49016231-49016250 | None:intergenic | 25.0% |
! | AATAACAATGGTAATATCAC+AGG | + | chr4.4:49017932-49017951 | MS.gene97660:CDS | 25.0% |
! | ATTAAGGTTAAGGAAGTTAA+AGG | + | chr4.4:49015839-49015858 | MS.gene97660:CDS | 25.0% |
! | ATTGACTACTATTAAGGTTA+AGG | + | chr4.4:49015829-49015848 | MS.gene97660:CDS | 25.0% |
! | CACAAAAAGAGAATAAAGAA+TGG | + | chr4.4:49015770-49015789 | MS.gene97660:CDS | 25.0% |
! | CATAAGTTTAAGGAAGTTAA+AGG | + | chr4.4:49015605-49015624 | MS.gene97660:CDS | 25.0% |
! | GGAAAATTTAAAGAGAAAGA+GGG | + | chr4.4:49015644-49015663 | MS.gene97660:CDS | 25.0% |
! | GTATAATCAAGTGTAATAGT+TGG | - | chr4.4:49017539-49017558 | None:intergenic | 25.0% |
! | TCAAAATATGCATTGAAGTT+TGG | + | chr4.4:49017097-49017116 | MS.gene97660:intron | 25.0% |
! | TGGAAAATTTAAAGAGAAAG+AGG | + | chr4.4:49015643-49015662 | MS.gene97660:CDS | 25.0% |
! | TTCAAACTTAATAGGTACAA+AGG | + | chr4.4:49017288-49017307 | MS.gene97660:intron | 25.0% |
!! | AATGGATGGAGTATTTATTA+AGG | + | chr4.4:49016662-49016681 | MS.gene97660:intron | 25.0% |
!! | CAAAACCAATCAAAATTTTC+TGG | + | chr4.4:49017665-49017684 | MS.gene97660:intron | 25.0% |
!! | CTTTAACTTCCTTAAACTTA+TGG | - | chr4.4:49015607-49015626 | None:intergenic | 25.0% |
!!! | GGTTTTGATTAGGTATTTAA+GGG | - | chr4.4:49017652-49017671 | None:intergenic | 25.0% |
!!! | TGGTTTTGATTAGGTATTTA+AGG | - | chr4.4:49017653-49017672 | None:intergenic | 25.0% |
AAAGAACAAGAAGTTTCTGA+TGG | + | chr4.4:49015737-49015756 | MS.gene97660:CDS | 30.0% | |
AAATACTTGAAGAACAAGGA+AGG | - | chr4.4:49017490-49017509 | None:intergenic | 30.0% | |
AAGAAAAAGAGACTTGAGAA+TGG | + | chr4.4:49015890-49015909 | MS.gene97660:CDS | 30.0% | |
ATAATGCGAAAGCAATCATT+AGG | - | chr4.4:49016705-49016724 | None:intergenic | 30.0% | |
ATCGACTACTAATAAGGTTA+AGG | + | chr4.4:49015709-49015728 | MS.gene97660:CDS | 30.0% | |
CAACAAACTCAAATCCAAAA+TGG | + | chr4.4:49017193-49017212 | MS.gene97660:intron | 30.0% | |
CTGCAACGATAATAAGATTT+AGG | - | chr4.4:49016327-49016346 | None:intergenic | 30.0% | |
GAAGTTTCTGATGGAAAATT+TGG | + | chr4.4:49015746-49015765 | MS.gene97660:CDS | 30.0% | |
GACAAAGATGCAAGAAAATT+TGG | - | chr4.4:49017782-49017801 | None:intergenic | 30.0% | |
GTACTGCTAATAATTGTGAA+GGG | - | chr4.4:49017718-49017737 | None:intergenic | 30.0% | |
GTTGAAATACTTGAAGAACA+AGG | - | chr4.4:49017494-49017513 | None:intergenic | 30.0% | |
GTTGTAATCACAACTTATGA+AGG | + | chr4.4:49017329-49017348 | MS.gene97660:CDS | 30.0% | |
TAACATCTGCATTCTTACTA+AGG | - | chr4.4:49016078-49016097 | None:intergenic | 30.0% | |
TAATGCGAAAGCAATCATTA+GGG | - | chr4.4:49016704-49016723 | None:intergenic | 30.0% | |
TAATGGTCAAAGTTGTGTAA+GGG | + | chr4.4:49016603-49016622 | MS.gene97660:intron | 30.0% | |
TATTTGATATGTATTGCACG+AGG | + | chr4.4:49016937-49016956 | MS.gene97660:intron | 30.0% | |
TCTTGAATCGACTACTAATA+AGG | + | chr4.4:49015703-49015722 | MS.gene97660:CDS | 30.0% | |
TTAATGGTCAAAGTTGTGTA+AGG | + | chr4.4:49016602-49016621 | MS.gene97660:intron | 30.0% | |
TTATTGTGTTAGATCACTGA+TGG | + | chr4.4:49016252-49016271 | MS.gene97660:intron | 30.0% | |
! | AAAGGAGTTTGAAACTGATA+TGG | - | chr4.4:49017590-49017609 | None:intergenic | 30.0% |
! | AAGGAGTTTGAAACTGATAT+GGG | - | chr4.4:49017589-49017608 | None:intergenic | 30.0% |
! | AGAAGAAAGTTACCTGTTTT+CGG | - | chr4.4:49016371-49016390 | None:intergenic | 30.0% |
! | CATGTTTCTATGCTAGAAAA+TGG | + | chr4.4:49017008-49017027 | MS.gene97660:intron | 30.0% |
! | CGATAATAAGATTTAGGACA+CGG | - | chr4.4:49016321-49016340 | None:intergenic | 30.0% |
! | GATAATAAGATTTAGGACAC+GGG | - | chr4.4:49016320-49016339 | None:intergenic | 30.0% |
! | TGATAATGTTGAGACAACAT+TGG | + | chr4.4:49016102-49016121 | MS.gene97660:CDS | 30.0% |
!! | AAAACGAAATTTGTTGATGC+TGG | + | chr4.4:49015806-49015825 | MS.gene97660:CDS | 30.0% |
!! | AAAATTTGGATTAGCAGCAA+TGG | - | chr4.4:49017768-49017787 | None:intergenic | 30.0% |
!! | AGAAACATGAGCTTTGAAAA+TGG | - | chr4.4:49016997-49017016 | None:intergenic | 30.0% |
!! | GTAGTCCAGAAAATTTTGAT+TGG | - | chr4.4:49017673-49017692 | None:intergenic | 30.0% |
!!! | AGTTGTTTTTGCCATTTCTT+TGG | - | chr4.4:49017384-49017403 | None:intergenic | 30.0% |
!!! | GACATGTATTTTGAAACGAA+TGG | - | chr4.4:49016418-49016437 | None:intergenic | 30.0% |
!!! | GACATGTATTTTGAAATGGA+TGG | + | chr4.4:49016648-49016667 | MS.gene97660:intron | 30.0% |
AAAAAGAGACTTGAGAATGG+TGG | + | chr4.4:49015893-49015912 | MS.gene97660:CDS | 35.0% | |
AATCTCCAAATACTCCACAA+AGG | + | chr4.4:49017561-49017580 | MS.gene97660:intron | 35.0% | |
AATGAGAAAACCTAGAAGTC+AGG | + | chr4.4:49016000-49016019 | MS.gene97660:CDS | 35.0% | |
ACTGTGATCTAGGAAACAAT+CGG | - | chr4.4:49016811-49016830 | None:intergenic | 35.0% | |
AGCAACAATAATGTCACAGA+AGG | + | chr4.4:49017908-49017927 | MS.gene97660:CDS | 35.0% | |
AGCTAGATCAGAAGAAACTA+TGG | + | chr4.4:49016147-49016166 | MS.gene97660:CDS | 35.0% | |
ATCTTATTATCGTTGCAGCA+TGG | + | chr4.4:49016329-49016348 | MS.gene97660:CDS | 35.0% | |
CGAATGGAGTACATGTAATT+TGG | - | chr4.4:49016402-49016421 | None:intergenic | 35.0% | |
GATGCTAGACCATAAGTTTA+AGG | + | chr4.4:49015595-49015614 | MS.gene97660:CDS | 35.0% | |
GCTATCATTGTGATTTCCTT+CGG | - | chr4.4:49017891-49017910 | None:intergenic | 35.0% | |
GGTACTGCTAATAATTGTGA+AGG | - | chr4.4:49017719-49017738 | None:intergenic | 35.0% | |
TAGCAACACTAATGATCAGA+AGG | + | chr4.4:49017955-49017974 | MS.gene97660:CDS | 35.0% | |
TGCTGGATTGACTACTATTA+AGG | + | chr4.4:49015823-49015842 | MS.gene97660:CDS | 35.0% | |
TTAACTGCCTGAGCAATATT+TGG | - | chr4.4:49017740-49017759 | None:intergenic | 35.0% | |
TTCCATTATTGGTCATACTC+AGG | + | chr4.4:49017814-49017833 | MS.gene97660:CDS | 35.0% | |
TTGTTGCATTCAGCTAATCT+AGG | - | chr4.4:49017179-49017198 | None:intergenic | 35.0% | |
TTTAATGGTCATCAACGTGA+TGG | - | chr4.4:49017075-49017094 | None:intergenic | 35.0% | |
TTTGGACAAAAACTGTCGAA+AGG | + | chr4.4:49016291-49016310 | MS.gene97660:CDS | 35.0% | |
! | GCAAAACTCTGAGAGATTAA+AGG | - | chr4.4:49017608-49017627 | None:intergenic | 35.0% |
! | TAAATGCATGGATTGTGGAA+TGG | - | chr4.4:49017047-49017066 | None:intergenic | 35.0% |
! | TCTAGGTTTTCTCATTGATG+AGG | - | chr4.4:49015996-49016015 | None:intergenic | 35.0% |
!! | CTGCGACATGTATTTTGAAA+TGG | + | chr4.4:49016644-49016663 | MS.gene97660:intron | 35.0% |
AACTGATATGGGTTCCTTTG+TGG | - | chr4.4:49017578-49017597 | None:intergenic | 40.0% | |
ACAAGATCTTTGCATTGCCT+TGG | - | chr4.4:49015929-49015948 | None:intergenic | 40.0% | |
AGCAGTACCAAATATTGCTC+AGG | + | chr4.4:49017730-49017749 | MS.gene97660:CDS | 40.0% | |
ATGGTCGTTGTATCGAAGAT+TGG | - | chr4.4:49017128-49017147 | None:intergenic | 40.0% | |
CATGTTTGTGACTGTGATCT+AGG | - | chr4.4:49016821-49016840 | None:intergenic | 40.0% | |
CCTGCTCTTACTTCCATTAT+TGG | + | chr4.4:49017803-49017822 | MS.gene97660:CDS | 40.0% | |
GTAATAGTTGGAAACGAAGC+AGG | - | chr4.4:49017527-49017546 | None:intergenic | 40.0% | |
GTCACAGAAGGCAATAACAA+TGG | + | chr4.4:49017920-49017939 | MS.gene97660:CDS | 40.0% | |
TCAGCATCAACATCAAGCAA+TGG | + | chr4.4:49017428-49017447 | MS.gene97660:CDS | 40.0% | |
TGATATGTATTGCACGAGGT+TGG | + | chr4.4:49016941-49016960 | MS.gene97660:intron | 40.0% | |
TGCCTGAGTATGACCAATAA+TGG | - | chr4.4:49017819-49017838 | None:intergenic | 40.0% | |
! | ATGCGTAAATGCATGGATTG+TGG | - | chr4.4:49017052-49017071 | None:intergenic | 40.0% |
! | CCAATAATGGAAGTAAGAGC+AGG | - | chr4.4:49017806-49017825 | None:intergenic | 40.0% |
! | GTCGATTCAAGATCTTTCCT+CGG | - | chr4.4:49015695-49015714 | None:intergenic | 40.0% |
! | TTTTCGGATTGAGCAACCAT+GGG | - | chr4.4:49016355-49016374 | None:intergenic | 40.0% |
AAAGAGGGAACTGAGAATGG+TGG | + | chr4.4:49015659-49015678 | MS.gene97660:CDS | 45.0% | |
AAGTCAGGACCAGTTAGGAT+CGG | + | chr4.4:49016015-49016034 | MS.gene97660:CDS | 45.0% | |
AATGGCAACAATGTCACCGA+AGG | + | chr4.4:49017872-49017891 | MS.gene97660:CDS | 45.0% | |
ACCTACTGCAGCCAAAGAAA+TGG | + | chr4.4:49017370-49017389 | MS.gene97660:CDS | 45.0% | |
CAAAATGGTAGCTGCTAGCT+AGG | + | chr4.4:49017208-49017227 | MS.gene97660:intron | 45.0% | |
CTTTGGCTGCAGTAGGTAAA+GGG | - | chr4.4:49017367-49017386 | None:intergenic | 45.0% | |
GAGAAAGAGGGAACTGAGAA+TGG | + | chr4.4:49015656-49015675 | MS.gene97660:CDS | 45.0% | |
GCATCAACATCAAGCAATGG+TGG | + | chr4.4:49017431-49017450 | MS.gene97660:CDS | 45.0% | |
GGACGTCAATGGAGAAAGTT+TGG | + | chr4.4:49016273-49016292 | MS.gene97660:CDS | 45.0% | |
TACTAATGCTGAGACTGCGA+TGG | + | chr4.4:49015955-49015974 | MS.gene97660:CDS | 45.0% | |
TCTTTGGCTGCAGTAGGTAA+AGG | - | chr4.4:49017368-49017387 | None:intergenic | 45.0% | |
TGGTTGCTCAATCCGAAAAC+AGG | + | chr4.4:49016356-49016375 | MS.gene97660:CDS | 45.0% | |
TTAAGGGCTCAAAGAAGCTG+AGG | - | chr4.4:49017636-49017655 | None:intergenic | 45.0% | |
! | ACTTGAGAATGGTGGAGAGT+TGG | + | chr4.4:49015901-49015920 | MS.gene97660:CDS | 45.0% |
! | AGATCACTGATGGACGTCAA+TGG | + | chr4.4:49016262-49016281 | MS.gene97660:intron | 45.0% |
! | CTAGCTAGCAGCTACCATTT+TGG | - | chr4.4:49017210-49017229 | None:intergenic | 45.0% |
! | GGGTTCCTTTGTGGAGTATT+TGG | - | chr4.4:49017569-49017588 | None:intergenic | 45.0% |
! | GTTTTCGGATTGAGCAACCA+TGG | - | chr4.4:49016356-49016375 | None:intergenic | 45.0% |
! | TTTTCATCGCCGATCCTAAC+TGG | - | chr4.4:49016027-49016046 | None:intergenic | 45.0% |
!! | ACAAGGAAGGAGTGTTCTTG+TGG | - | chr4.4:49017477-49017496 | None:intergenic | 45.0% |
!! | CAAGGAAGGAGTGTTCTTGT+GGG | - | chr4.4:49017476-49017495 | None:intergenic | 45.0% |
!! | GTGATGGATGCGTAAATGCA+TGG | - | chr4.4:49017059-49017078 | None:intergenic | 45.0% |
!! | TATATAATTAAAGATATTAA+TGG | + | chr4.4:49016586-49016605 | MS.gene97660:intron | 5.0% |
!! | TATATTAGTTAAAAAAAATA+TGG | - | chr4.4:49016481-49016500 | None:intergenic | 5.0% |
AGTAAGTACGTCGACGTCGA+TGG | - | chr4.4:49017147-49017166 | None:intergenic | 50.0% | |
CCTAACTGGTCCTGACTTCT+AGG | - | chr4.4:49016013-49016032 | None:intergenic | 50.0% | |
CCTAGAAGTCAGGACCAGTT+AGG | + | chr4.4:49016010-49016029 | MS.gene97660:CDS | 50.0% | |
GCCATTTCTTTGGCTGCAGT+AGG | - | chr4.4:49017374-49017393 | None:intergenic | 50.0% | |
!! | AAGCATCGAGGTTGCTTCGA+AGG | + | chr4.4:49016045-49016064 | MS.gene97660:CDS | 50.0% |
!! | ATCGGCGATGAAAAGCATCG+AGG | + | chr4.4:49016033-49016052 | MS.gene97660:CDS | 50.0% |
!! | CTGAGAATGGTGGAGTACTG+AGG | + | chr4.4:49015669-49015688 | MS.gene97660:CDS | 50.0% |
TATCGTTGCAGCATGGCCCA+TGG | + | chr4.4:49016336-49016355 | MS.gene97660:CDS | 55.0% | |
TGGCTGCAGTAGGTAAAGGG+TGG | - | chr4.4:49017364-49017383 | None:intergenic | 55.0% | |
! | GTGTAAGGGCATGTGTGCAG+TGG | + | chr4.4:49016617-49016636 | MS.gene97660:intron | 55.0% |
!! | ATGGTGGAGAGTTGGTGCCA+AGG | + | chr4.4:49015909-49015928 | MS.gene97660:CDS | 55.0% |
!! | ATGGTGGAGTACTGAGGCCG+AGG | + | chr4.4:49015675-49015694 | MS.gene97660:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.4 | gene | 49015578 | 49017982 | 49015578 | ID=MS.gene97660 |
chr4.4 | mRNA | 49015578 | 49017982 | 49015578 | ID=MS.gene97660.t1;Parent=MS.gene97660 |
chr4.4 | exon | 49015578 | 49016168 | 49015578 | ID=MS.gene97660.t1.exon1;Parent=MS.gene97660.t1 |
chr4.4 | CDS | 49015578 | 49016168 | 49015578 | ID=cds.MS.gene97660.t1;Parent=MS.gene97660.t1 |
chr4.4 | exon | 49016264 | 49016377 | 49016264 | ID=MS.gene97660.t1.exon2;Parent=MS.gene97660.t1 |
chr4.4 | CDS | 49016264 | 49016377 | 49016264 | ID=cds.MS.gene97660.t1;Parent=MS.gene97660.t1 |
chr4.4 | exon | 49017302 | 49017503 | 49017302 | ID=MS.gene97660.t1.exon3;Parent=MS.gene97660.t1 |
chr4.4 | CDS | 49017302 | 49017503 | 49017302 | ID=cds.MS.gene97660.t1;Parent=MS.gene97660.t1 |
chr4.4 | exon | 49017711 | 49017982 | 49017711 | ID=MS.gene97660.t1.exon4;Parent=MS.gene97660.t1 |
chr4.4 | CDS | 49017711 | 49017982 | 49017711 | ID=cds.MS.gene97660.t1;Parent=MS.gene97660.t1 |
Gene Sequence |
Protein sequence |