Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene97736.t1 | XP_003612815.1 | 95.9 | 848 | 26 | 3 | 1 | 842 | 1 | 845 | 0.00E+00 | 1629.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene97736.t1 | Q336N8 | 48.9 | 859 | 373 | 14 | 5 | 832 | 6 | 829 | 7.0e-201 | 702.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene97736.t1 | G7KCC8 | 95.9 | 848 | 26 | 3 | 1 | 842 | 1 | 845 | 0.0e+00 | 1629.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene97736.t1 | TR | Jumonji |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene97736.t1 | MTR_5g029370 | 96.580 | 848 | 20 | 3 | 1 | 842 | 1 | 845 | 0.0 | 1698 |
MS.gene97736.t1 | MTR_5g029370 | 96.580 | 848 | 20 | 3 | 1 | 842 | 1 | 845 | 0.0 | 1698 |
MS.gene97736.t1 | MTR_1g038400 | 58.071 | 477 | 199 | 1 | 71 | 546 | 10 | 486 | 0.0 | 582 |
MS.gene97736.t1 | MTR_1g038370 | 51.025 | 488 | 212 | 4 | 83 | 569 | 2 | 463 | 3.27e-173 | 512 |
MS.gene97736.t1 | MTR_3g075210 | 42.667 | 375 | 197 | 7 | 82 | 444 | 11 | 379 | 2.24e-79 | 281 |
MS.gene97736.t1 | MTR_8g089260 | 37.065 | 402 | 176 | 9 | 86 | 420 | 30 | 421 | 2.55e-59 | 219 |
MS.gene97736.t1 | MTR_1g078070 | 28.800 | 625 | 339 | 18 | 4 | 543 | 67 | 670 | 4.00e-58 | 216 |
MS.gene97736.t1 | MTR_1g078070 | 28.640 | 625 | 340 | 17 | 4 | 543 | 67 | 670 | 7.08e-58 | 216 |
MS.gene97736.t1 | MTR_7g407000 | 63.571 | 140 | 33 | 2 | 266 | 404 | 32 | 154 | 4.90e-57 | 192 |
MS.gene97736.t1 | MTR_2g047130 | 34.826 | 402 | 185 | 8 | 86 | 420 | 49 | 440 | 1.08e-56 | 211 |
MS.gene97736.t1 | MTR_2g047130 | 34.826 | 402 | 185 | 8 | 86 | 420 | 46 | 437 | 1.41e-56 | 211 |
MS.gene97736.t1 | MTR_1g094740 | 49.246 | 199 | 97 | 1 | 233 | 431 | 291 | 485 | 2.17e-56 | 211 |
MS.gene97736.t1 | MTR_5g010300 | 36.412 | 379 | 200 | 12 | 158 | 511 | 291 | 653 | 4.35e-54 | 204 |
MS.gene97736.t1 | MTR_5g010300 | 36.412 | 379 | 200 | 12 | 158 | 511 | 291 | 653 | 5.21e-54 | 204 |
MS.gene97736.t1 | MTR_5g010300 | 36.412 | 379 | 200 | 12 | 158 | 511 | 291 | 653 | 5.31e-54 | 204 |
MS.gene97736.t1 | MTR_5g010300 | 36.314 | 369 | 195 | 11 | 158 | 502 | 291 | 643 | 2.98e-53 | 202 |
MS.gene97736.t1 | MTR_7g097070 | 28.144 | 334 | 221 | 9 | 237 | 559 | 338 | 663 | 1.20e-30 | 130 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene97736.t1 | AT5G46910 | 60.080 | 749 | 251 | 10 | 6 | 735 | 5 | 724 | 0.0 | 886 |
MS.gene97736.t1 | AT5G46910 | 68.342 | 597 | 170 | 4 | 6 | 587 | 5 | 597 | 0.0 | 858 |
MS.gene97736.t1 | AT3G48430 | 33.267 | 499 | 283 | 9 | 82 | 535 | 13 | 506 | 1.97e-66 | 242 |
MS.gene97736.t1 | AT2G34880 | 31.520 | 533 | 275 | 12 | 86 | 545 | 58 | 573 | 3.54e-60 | 219 |
MS.gene97736.t1 | AT1G30810 | 35.176 | 398 | 191 | 8 | 86 | 424 | 56 | 445 | 1.10e-59 | 218 |
MS.gene97736.t1 | AT1G30810 | 35.176 | 398 | 191 | 8 | 86 | 424 | 56 | 445 | 1.10e-59 | 218 |
MS.gene97736.t1 | AT1G30810 | 35.176 | 398 | 191 | 8 | 86 | 424 | 56 | 445 | 1.10e-59 | 218 |
MS.gene97736.t1 | AT4G20400 | 33.827 | 405 | 194 | 8 | 86 | 425 | 53 | 448 | 3.09e-59 | 218 |
MS.gene97736.t1 | AT1G63490 | 39.362 | 282 | 145 | 5 | 157 | 421 | 35 | 307 | 3.94e-58 | 216 |
MS.gene97736.t1 | AT1G63490 | 39.362 | 282 | 145 | 5 | 157 | 421 | 288 | 560 | 4.01e-58 | 217 |
MS.gene97736.t1 | AT1G63490 | 39.362 | 282 | 145 | 5 | 157 | 421 | 288 | 560 | 4.05e-58 | 217 |
MS.gene97736.t1 | AT1G08620 | 31.434 | 544 | 275 | 17 | 86 | 543 | 157 | 688 | 1.45e-57 | 214 |
MS.gene97736.t1 | AT1G08620 | 31.434 | 544 | 275 | 17 | 86 | 543 | 143 | 674 | 1.48e-57 | 214 |
MS.gene97736.t1 | AT1G08620 | 31.434 | 544 | 275 | 17 | 86 | 543 | 143 | 674 | 1.48e-57 | 214 |
MS.gene97736.t1 | AT1G08620 | 31.434 | 544 | 275 | 17 | 86 | 543 | 143 | 674 | 1.48e-57 | 214 |
MS.gene97736.t1 | AT4G20400 | 33.756 | 394 | 187 | 8 | 97 | 425 | 7 | 391 | 1.53e-55 | 207 |
MS.gene97736.t1 | AT5G04240 | 50.000 | 188 | 90 | 1 | 233 | 420 | 259 | 442 | 4.77e-55 | 207 |
MS.gene97736.t1 | AT2G38950 | 26.772 | 508 | 284 | 17 | 83 | 526 | 102 | 585 | 2.30e-34 | 141 |
MS.gene97736.t1 | AT1G63490 | 48.913 | 92 | 47 | 0 | 330 | 421 | 10 | 101 | 2.87e-24 | 110 |
Find 174 sgRNAs with CRISPR-Local
Find 342 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCTTATAGACAGGGACTTTA+TGG | 0.160704 | 5.1:-19916762 | None:intergenic |
ATTCTGATTCAGGAATATTT+AGG | 0.200884 | 5.1:+19918829 | MS.gene97736:CDS |
GGAAATTGGTCGTGGGAAAA+TGG | 0.206381 | 5.1:+19915974 | MS.gene97736:CDS |
CAAATCAACTTTGCGTCTAT+TGG | 0.212579 | 5.1:+19916262 | MS.gene97736:CDS |
AAGGATATGAATACATATTT+TGG | 0.248625 | 5.1:-19918302 | None:intergenic |
ATATCAACTTTATGATTAAC+AGG | 0.250912 | 5.1:-19919170 | None:intergenic |
CAATAGACGCAAAGTTGATT+TGG | 0.257289 | 5.1:-19916261 | None:intergenic |
TTATGGTCCATCAAAATATT+AGG | 0.259778 | 5.1:-19916745 | None:intergenic |
TACACAGAATCAATTTGTTT+TGG | 0.264444 | 5.1:+19918428 | MS.gene97736:CDS |
CTTGGTGATTGGTTTCCTCT+TGG | 0.276385 | 5.1:+19916994 | MS.gene97736:CDS |
TTGGTGATTGGTTTCCTCTT+GGG | 0.277791 | 5.1:+19916995 | MS.gene97736:CDS |
ATTCCGTGAATATGAGAAAA+TGG | 0.282693 | 5.1:+19915875 | MS.gene97736:CDS |
GGAGATATGCACTTCTTAAC+AGG | 0.290366 | 5.1:+19917031 | MS.gene97736:CDS |
GGATTATTTGTTGGCAGTCC+TGG | 0.299371 | 5.1:-19918396 | None:intergenic |
GCTCCAGAAGCTTCTAAATA+TGG | 0.300151 | 5.1:+19914815 | MS.gene97736:CDS |
CCTTGCAAATCTGTTCTTCA+AGG | 0.301570 | 5.1:-19919201 | None:intergenic |
GAAAAGAAATCTGAAGATTA+TGG | 0.302496 | 5.1:+19918881 | MS.gene97736:CDS |
GACAGTGATGATTCTGATTC+AGG | 0.305131 | 5.1:+19918819 | MS.gene97736:CDS |
CCATAAAGTCCCTGTCTATA+AGG | 0.310054 | 5.1:+19916762 | MS.gene97736:CDS |
TAAGTTTGATACAAGCGATT+TGG | 0.321047 | 5.1:+19914706 | MS.gene97736:CDS |
TTCTGATTCAGGAATATTTA+GGG | 0.330786 | 5.1:+19918830 | MS.gene97736:CDS |
GCCTCTCCGCCTTGCTGAAT+GGG | 0.334178 | 5.1:+19915725 | MS.gene97736:CDS |
ACGTCAGACACTTCTGGTTT+AGG | 0.338162 | 5.1:-19918468 | None:intergenic |
TATTATTTCAGAAACTTTCC+TGG | 0.338216 | 5.1:+19916234 | MS.gene97736:intron |
CTTACTTGGAAAAGGAGTTT+TGG | 0.351864 | 5.1:+19915949 | MS.gene97736:CDS |
CTTTGCAAAGAAGTTCTTCA+TGG | 0.354153 | 5.1:-19917068 | None:intergenic |
AGCCTCTCCGCCTTGCTGAA+TGG | 0.359090 | 5.1:+19915724 | MS.gene97736:CDS |
AATAGACGCAAAGTTGATTT+GGG | 0.363852 | 5.1:-19916260 | None:intergenic |
ATACCATATTTAGAAGCTTC+TGG | 0.364051 | 5.1:-19914818 | None:intergenic |
TTGAGTGCTTCTGTACCTGC+TGG | 0.368641 | 5.1:+19915651 | MS.gene97736:CDS |
GGAGAATACACAGGACATTC+TGG | 0.368911 | 5.1:-19914746 | None:intergenic |
AAGGAAACGTCAGACACTTC+TGG | 0.371873 | 5.1:-19918474 | None:intergenic |
AACAGATTTGCAAGGGGAAA+TGG | 0.376372 | 5.1:+19919209 | MS.gene97736:CDS |
TCTATTGGAAACGTCGATTC+CGG | 0.379529 | 5.1:+19916277 | MS.gene97736:CDS |
GAGAGAGGATATTACGGATA+TGG | 0.379961 | 5.1:+19918209 | MS.gene97736:CDS |
TGGAGCCTTTGATGTTCTCT+TGG | 0.382450 | 5.1:+19916702 | MS.gene97736:CDS |
GGAGGAATTTGAAGATCCTT+TGG | 0.383247 | 5.1:+19914775 | MS.gene97736:CDS |
GGAGCCTTTGATGTTCTCTT+GGG | 0.386850 | 5.1:+19916703 | MS.gene97736:CDS |
TCTTCAAATTCCTCCTTTGT+TGG | 0.392588 | 5.1:-19914767 | None:intergenic |
ATGTCTTCCTGCCACTTACT+TGG | 0.401021 | 5.1:+19915935 | MS.gene97736:CDS |
TCCACAATGGGCTTGATGTC+AGG | 0.401355 | 5.1:-19918792 | None:intergenic |
ATATTTATCACTTGATTCAC+TGG | 0.418019 | 5.1:-19919144 | None:intergenic |
GAAGTGCCTTCCATTGAGAT+TGG | 0.418788 | 5.1:+19919335 | MS.gene97736:CDS |
TGAGCAGGAAGATGTGATAT+TGG | 0.421130 | 5.1:+19918251 | MS.gene97736:CDS |
AAGAGTGGATGCAGCAGAAA+AGG | 0.424313 | 5.1:-19918493 | None:intergenic |
CCACACTCTGGATTATTTGT+TGG | 0.427777 | 5.1:-19918405 | None:intergenic |
TTCTCTGCTTTAAGAGAAGA+AGG | 0.428070 | 5.1:-19918861 | None:intergenic |
TTATCTGAGGAGGCTAGAAA+TGG | 0.429833 | 5.1:+19914512 | MS.gene97736:CDS |
TTCAAAACATTCTGAGCAGC+AGG | 0.432668 | 5.1:+19918905 | MS.gene97736:CDS |
TATCCCTGGTCACTCAGCTT+TGG | 0.434546 | 5.1:+19916615 | MS.gene97736:CDS |
ATCAGCTTGGGAACAGCAAA+TGG | 0.440002 | 5.1:+19916054 | MS.gene97736:CDS |
TGGTGATTGGTTTCCTCTTG+GGG | 0.449362 | 5.1:+19916996 | MS.gene97736:CDS |
TGAAACATCTTACAGGTAGA+AGG | 0.451605 | 5.1:+19914476 | MS.gene97736:intron |
TTGTCAAGTGATGGAGAAGA+TGG | 0.453056 | 5.1:+19916682 | MS.gene97736:CDS |
TTGATACAAGCGATTTGGAT+TGG | 0.454805 | 5.1:+19914711 | MS.gene97736:CDS |
CTCAGCTTTGGAATTTGAAA+GGG | 0.454857 | 5.1:+19916627 | MS.gene97736:CDS |
TGAGTGCTTCTGTACCTGCT+GGG | 0.455362 | 5.1:+19915652 | MS.gene97736:CDS |
GTTGGTTACTAATGAAATCA+AGG | 0.462719 | 5.1:+19917214 | MS.gene97736:CDS |
AAGCCTGCATGGTACGCTCT+AGG | 0.463569 | 5.1:-19916820 | None:intergenic |
TTGTCTGAGAGAGGATATTA+CGG | 0.463594 | 5.1:+19918203 | MS.gene97736:CDS |
GAAATTGGTCGTGGGAAAAT+GGG | 0.470041 | 5.1:+19915975 | MS.gene97736:CDS |
CTCTTGGGGCTATTGCAAGC+AGG | 0.475256 | 5.1:+19917010 | MS.gene97736:CDS |
AAGTGCCTTCCATTGAGATT+GGG | 0.476944 | 5.1:+19919336 | MS.gene97736:CDS |
GTTTCCAGCATTGTGCTAGT+TGG | 0.477992 | 5.1:+19917196 | MS.gene97736:CDS |
CACTGCATTCTTTAGGCTGA+GGG | 0.481254 | 5.1:+19918663 | MS.gene97736:intron |
TATAAGGCTGTTCAAAAGCC+AGG | 0.481451 | 5.1:+19916778 | MS.gene97736:CDS |
TCCTGCCACTTACTTGGAAA+AGG | 0.482416 | 5.1:+19915941 | MS.gene97736:CDS |
TTTGCTGCAACCTCTCTCTT+CGG | 0.483361 | 5.1:-19919304 | None:intergenic |
TGGAGGATCATTATTTGTAC+AGG | 0.487458 | 5.1:+19916433 | MS.gene97736:CDS |
AGTTCTTCATGGGGCAGTAA+AGG | 0.488348 | 5.1:-19917057 | None:intergenic |
TCCTGTGTATTCTCCAACAA+AGG | 0.493715 | 5.1:+19914754 | MS.gene97736:CDS |
TTTCAGAGAGCTGAAGCAAA+TGG | 0.495918 | 5.1:+19918336 | MS.gene97736:CDS |
TGCAGCAAAGATGTTTGAGC+AGG | 0.497284 | 5.1:+19918236 | MS.gene97736:CDS |
CTTCTCCCACTGATCAGCTT+GGG | 0.498196 | 5.1:+19916042 | MS.gene97736:CDS |
GAACAGCAAATGGAATTTGA+AGG | 0.498848 | 5.1:+19916064 | MS.gene97736:CDS |
TTGAGAGGTTCACCTTCTTG+TGG | 0.502769 | 5.1:+19914635 | MS.gene97736:CDS |
TTCATTAAAACAACCCCAGC+AGG | 0.503191 | 5.1:-19915666 | None:intergenic |
GTAACCAACTAGCACAATGC+TGG | 0.505912 | 5.1:-19917200 | None:intergenic |
AATTCCAAAGCTGAGTGACC+AGG | 0.507784 | 5.1:-19916619 | None:intergenic |
ACTCAGCTTTGGAATTTGAA+AGG | 0.508410 | 5.1:+19916626 | MS.gene97736:CDS |
TTTGCAAAGAAGTTCTTCAT+GGG | 0.510875 | 5.1:-19917067 | None:intergenic |
ACTTCTCCCACTGATCAGCT+TGG | 0.516010 | 5.1:+19916041 | MS.gene97736:CDS |
GAATATGCATGTGATGTTGA+TGG | 0.516379 | 5.1:+19916005 | MS.gene97736:CDS |
GCACGAAGATATTGCAGCGC+TGG | 0.518647 | 5.1:+19915912 | MS.gene97736:CDS |
AGAAGATTCACATGCACTGT+TGG | 0.519781 | 5.1:-19918715 | None:intergenic |
TCACTGTCGTTATCCACAAT+GGG | 0.521016 | 5.1:-19918804 | None:intergenic |
ATCAGTGGGAGAAGTTGAAA+AGG | 0.521526 | 5.1:-19916033 | None:intergenic |
CAAAGTTGATTTGGGTAACC+AGG | 0.522326 | 5.1:-19916252 | None:intergenic |
GATGCTTATTCATTCAAGCT+TGG | 0.528112 | 5.1:+19917095 | MS.gene97736:CDS |
CAGCATTCCAATGTATAGCA+TGG | 0.528642 | 5.1:-19916388 | None:intergenic |
TCGCTTTGGCCCAATCTCAA+TGG | 0.528894 | 5.1:-19919345 | None:intergenic |
TTCCCTAGAGCGTACCATGC+AGG | 0.529080 | 5.1:+19916817 | MS.gene97736:CDS |
CTTGAAGAACAGATTTGCAA+GGG | 0.530129 | 5.1:+19919202 | MS.gene97736:CDS |
AGCTTTGGAATTTGAAAGGG+TGG | 0.531900 | 5.1:+19916630 | MS.gene97736:CDS |
TGCTGTTTAGTATGTTTGCA+TGG | 0.532827 | 5.1:+19916406 | MS.gene97736:CDS |
GAGCTTTCATGATACAAAGC+AGG | 0.533393 | 5.1:-19918744 | None:intergenic |
AGCCTGCATGGTACGCTCTA+GGG | 0.534040 | 5.1:-19916819 | None:intergenic |
TGATTCTGTGTACCACACTC+TGG | 0.536807 | 5.1:-19918417 | None:intergenic |
CTGGTTGTAAACTTGAATCC+AGG | 0.537765 | 5.1:-19915696 | None:intergenic |
AAAACTTGGTATGGTATCCC+TGG | 0.538981 | 5.1:+19916601 | MS.gene97736:CDS |
CCTTGAAGAACAGATTTGCA+AGG | 0.541170 | 5.1:+19919201 | MS.gene97736:CDS |
ACTTGTCTGAGTGGCAGCAA+TGG | 0.548160 | 5.1:-19914576 | None:intergenic |
AACCATGACTGAAGCCTGCA+TGG | 0.553458 | 5.1:-19916831 | None:intergenic |
TTACCATGGCGTAAGCATAC+AGG | 0.555597 | 5.1:-19917339 | None:intergenic |
GAGGGGCATTGTGAAGAACT+TGG | 0.556419 | 5.1:+19918681 | MS.gene97736:CDS |
AGTGTTTCTTCTCATTCGCA+TGG | 0.557562 | 5.1:+19917246 | MS.gene97736:CDS |
AAGGCGGAGAGGCTGCACTC+TGG | 0.558918 | 5.1:-19915715 | None:intergenic |
CTGTTCCCAAGCTGATCAGT+GGG | 0.560264 | 5.1:-19916047 | None:intergenic |
TCTTGTGGCACGAGATTGCA+TGG | 0.561186 | 5.1:+19914650 | MS.gene97736:CDS |
TGCAATCTCGTGCCACAAGA+AGG | 0.561867 | 5.1:-19914647 | None:intergenic |
CATAACAGTCACGTTTGCAC+AGG | 0.563814 | 5.1:-19917284 | None:intergenic |
AAATCTCTTGACCTCATCTG+TGG | 0.567861 | 5.1:+19918165 | MS.gene97736:CDS |
TATCTGAGGAGGCTAGAAAT+GGG | 0.570288 | 5.1:+19914513 | MS.gene97736:CDS |
TGGTCCATCAAAATATTAGG+TGG | 0.570687 | 5.1:-19916742 | None:intergenic |
AGGTAGAGTACGATTATCTG+AGG | 0.570903 | 5.1:+19914499 | MS.gene97736:CDS |
TACCATGCAGGCTTCAGTCA+TGG | 0.571674 | 5.1:+19916829 | MS.gene97736:CDS |
ATAAGGCTGTTCAAAAGCCA+GGG | 0.571901 | 5.1:+19916779 | MS.gene97736:CDS |
ATCACTGTCGTTATCCACAA+TGG | 0.572126 | 5.1:-19918805 | None:intergenic |
GAGCCTTTGATGTTCTCTTG+GGG | 0.573988 | 5.1:+19916704 | MS.gene97736:CDS |
AAGGTTATTACAAACTCCCC+TGG | 0.576603 | 5.1:-19916796 | None:intergenic |
GCTGTTCCCAAGCTGATCAG+TGG | 0.577343 | 5.1:-19916048 | None:intergenic |
ATGAGATAACAAGTCTGAAG+AGG | 0.577900 | 5.1:-19917139 | None:intergenic |
TTCTGAAAGAGAGCAAAGAG+TGG | 0.579736 | 5.1:-19918508 | None:intergenic |
ACAGAACCCATGCTATACAT+TGG | 0.582151 | 5.1:+19916381 | MS.gene97736:CDS |
TTGGTTACTAATGAAATCAA+GGG | 0.584367 | 5.1:+19917215 | MS.gene97736:CDS |
TTTCCCCAAGAGAACATCAA+AGG | 0.586319 | 5.1:-19916707 | None:intergenic |
TTTGGCAGGAAATTGGTCGT+GGG | 0.589186 | 5.1:+19915967 | MS.gene97736:CDS |
TAGTATGTTTGCATGGCATG+TGG | 0.590708 | 5.1:+19916413 | MS.gene97736:CDS |
AGCATTCCAATGTATAGCAT+GGG | 0.591957 | 5.1:-19916387 | None:intergenic |
ATATGAGAAAATGGCAAACA+AGG | 0.593266 | 5.1:+19915884 | MS.gene97736:CDS |
GCTGCAACCTCTCTCTTCGG+TGG | 0.594530 | 5.1:-19919301 | None:intergenic |
TGAGATAACAAGTCTGAAGA+GGG | 0.601071 | 5.1:-19917138 | None:intergenic |
GAGTGCTTCTGTACCTGCTG+GGG | 0.605225 | 5.1:+19915653 | MS.gene97736:CDS |
TTGAAGAAAGTCCTTCCTGA+AGG | 0.607024 | 5.1:+19919089 | MS.gene97736:CDS |
TTTGGCCCAATCTCAATGGA+AGG | 0.607949 | 5.1:-19919341 | None:intergenic |
ATCTTCTGCAAATAAACCAA+AGG | 0.609064 | 5.1:-19914791 | None:intergenic |
AGCTTTCATGATACAAAGCA+GGG | 0.609267 | 5.1:-19918743 | None:intergenic |
TCCTTTGTTGGAGAATACAC+AGG | 0.609723 | 5.1:-19914755 | None:intergenic |
CTCTGAAACATATCTGACAA+AGG | 0.609736 | 5.1:-19918321 | None:intergenic |
ACCTGACATCAAGCCCATTG+TGG | 0.611987 | 5.1:+19918791 | MS.gene97736:CDS |
AAAATTCTAGGTTTCAACTG+TGG | 0.612221 | 5.1:+19916952 | MS.gene97736:intron |
AATCTCTTGACCTCATCTGT+GGG | 0.617973 | 5.1:+19918166 | MS.gene97736:CDS |
AGTGGAGGAGATGCTTTGAG+AGG | 0.620104 | 5.1:+19914620 | MS.gene97736:CDS |
TCTCTGCTTTAAGAGAAGAA+GGG | 0.631402 | 5.1:-19918860 | None:intergenic |
ATTCCAAAGCTGAGTGACCA+GGG | 0.631590 | 5.1:-19916618 | None:intergenic |
GCAGGTACAGAAGCACTCAA+AGG | 0.631676 | 5.1:-19915648 | None:intergenic |
TGTGTTTGCTCCCACAGATG+AGG | 0.633446 | 5.1:-19918176 | None:intergenic |
TGTGTATTCTCCAACAAAGG+AGG | 0.634871 | 5.1:+19914757 | MS.gene97736:CDS |
ACACACTCTTTGTCTGAGAG+AGG | 0.636369 | 5.1:+19918194 | MS.gene97736:CDS |
CTTCAGTATCCCATTCAGCA+AGG | 0.636604 | 5.1:-19915734 | None:intergenic |
CCAAAGCGACTCAAAATCCG+AGG | 0.637882 | 5.1:+19919359 | MS.gene97736:CDS |
GTTAGCAGCACTTGTCTGAG+TGG | 0.638870 | 5.1:-19914585 | None:intergenic |
TCCCATTCAGCAAGGCGGAG+AGG | 0.639564 | 5.1:-19915726 | None:intergenic |
TTGAAGAACAGATTTGCAAG+GGG | 0.640429 | 5.1:+19919203 | MS.gene97736:CDS |
TTTGAACAGCCTTATAGACA+GGG | 0.640431 | 5.1:-19916771 | None:intergenic |
AACGTGATGAATAGAAGTGG+AGG | 0.643226 | 5.1:+19914605 | MS.gene97736:CDS |
TATGTTTGCATGGCATGTGG+AGG | 0.652368 | 5.1:+19916416 | MS.gene97736:CDS |
GGAGCAGAGGAACAGTCATG+AGG | 0.652702 | 5.1:-19918531 | None:intergenic |
CATCCTGTATGCTTACGCCA+TGG | 0.654178 | 5.1:+19917336 | MS.gene97736:CDS |
AAGATCACCACCGAAGAGAG+AGG | 0.658877 | 5.1:+19919294 | MS.gene97736:CDS |
GAGATATGCACTTCTTAACA+GGG | 0.660720 | 5.1:+19917032 | MS.gene97736:CDS |
CTGCTTGCAATAGCCCCAAG+AGG | 0.661556 | 5.1:-19917009 | None:intergenic |
TGCATGGTACGCTCTAGGGA+AGG | 0.661692 | 5.1:-19916815 | None:intergenic |
TTGCAAAGAAGTTCTTCATG+GGG | 0.664478 | 5.1:-19917066 | None:intergenic |
TAGAGTACGATTATCTGAGG+AGG | 0.665436 | 5.1:+19914502 | MS.gene97736:CDS |
TATCAACTTTATGATTAACA+GGG | 0.667769 | 5.1:-19919169 | None:intergenic |
GCTAACGTGATGAATAGAAG+TGG | 0.674460 | 5.1:+19914602 | MS.gene97736:CDS |
CCAACAAATAATCCAGAGTG+TGG | 0.694859 | 5.1:+19918405 | MS.gene97736:CDS |
AACATCTTACAGGTAGAAGG+AGG | 0.700370 | 5.1:+19914479 | MS.gene97736:intron |
ACTGCATTCTTTAGGCTGAG+GGG | 0.702141 | 5.1:+19918664 | MS.gene97736:intron |
CAGTATCCCATTCAGCAAGG+CGG | 0.708241 | 5.1:-19915731 | None:intergenic |
TAAGGCTGTTCAAAAGCCAG+GGG | 0.708748 | 5.1:+19916780 | MS.gene97736:CDS |
GCTTTCATGATACAAAGCAG+GGG | 0.738700 | 5.1:-19918742 | None:intergenic |
AGCATTAACTATCAGCACTG+CGG | 0.747153 | 5.1:+19916571 | MS.gene97736:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAATATTATTTATATGGTAA+TGG | + | chr5.1:19916547-19916566 | MS.gene97736:intron | 10.0% |
!!! | ATGAATTTTAATTATATTTG+AGG | + | chr5.1:19917640-19917659 | MS.gene97736:intron | 10.0% |
!!! | CATTGATAATATTATTTATA+TGG | + | chr5.1:19916541-19916560 | MS.gene97736:intron | 10.0% |
!! | AAATTCAAATGAAAAAAGTT+CGG | - | chr5.1:19915594-19915613 | None:intergenic | 15.0% |
!!! | CAAAAATTATTAGTTTTCAT+AGG | - | chr5.1:19917793-19917812 | None:intergenic | 15.0% |
!!! | TTGAATTTTTGATAAATTTC+AGG | + | chr5.1:19915606-19915625 | MS.gene97736:intron | 15.0% |
!! | AAAACAATCATGGATATTAT+TGG | + | chr5.1:19917461-19917480 | MS.gene97736:intron | 20.0% |
!! | AAGTTTATACAAAACAATCA+TGG | + | chr5.1:19917451-19917470 | MS.gene97736:intron | 20.0% |
!! | AGTATGATAAATAAATAACG+GGG | - | chr5.1:19916137-19916156 | None:intergenic | 20.0% |
!! | ATATCAACTTTATGATTAAC+AGG | - | chr5.1:19919173-19919192 | None:intergenic | 20.0% |
!! | ATTCGATAAGTTTATTAACA+TGG | - | chr5.1:19916204-19916223 | None:intergenic | 20.0% |
!! | CAGTATGATAAATAAATAAC+GGG | - | chr5.1:19916138-19916157 | None:intergenic | 20.0% |
!! | CCAGTATGATAAATAAATAA+CGG | - | chr5.1:19916139-19916158 | None:intergenic | 20.0% |
!! | TATCAACTTTATGATTAACA+GGG | - | chr5.1:19919172-19919191 | None:intergenic | 20.0% |
!! | TGGGAATATAATATTATGTT+TGG | + | chr5.1:19917425-19917444 | MS.gene97736:intron | 20.0% |
!! | TTATGTAAGATAGAAAATGT+TGG | - | chr5.1:19919025-19919044 | None:intergenic | 20.0% |
!! | TTTGAAAATGAAAAGCAAAT+AGG | + | chr5.1:19917949-19917968 | MS.gene97736:intron | 20.0% |
!!! | AAAGCATTTTAACAAAATGA+CGG | + | chr5.1:19916161-19916180 | MS.gene97736:intron | 20.0% |
!!! | AAGGATATGAATACATATTT+TGG | - | chr5.1:19918305-19918324 | None:intergenic | 20.0% |
!!! | AATTTTGATCTATATGAACA+GGG | + | chr5.1:19919056-19919075 | MS.gene97736:intron | 20.0% |
!!! | ATTAAAATTCATATTTGCTG+AGG | - | chr5.1:19917632-19917651 | None:intergenic | 20.0% |
!!! | ATTATTAGTTTTCATAGGTA+TGG | - | chr5.1:19917788-19917807 | None:intergenic | 20.0% |
!!! | ATTCAAAACACTTACATTTT+TGG | - | chr5.1:19918556-19918575 | None:intergenic | 20.0% |
!!! | TAATTTTGATCTATATGAAC+AGG | + | chr5.1:19919055-19919074 | MS.gene97736:intron | 20.0% |
!!! | TGAATATCTTGTTTGAATAT+TGG | + | chr5.1:19918583-19918602 | MS.gene97736:intron | 20.0% |
!!! | TGTTTTGAGTTTTTTCAAAT+AGG | - | chr5.1:19915449-19915468 | None:intergenic | 20.0% |
!!! | TTATTAGTTTTCATAGGTAT+GGG | - | chr5.1:19917787-19917806 | None:intergenic | 20.0% |
!!! | TTCAAAACACTTACATTTTT+GGG | - | chr5.1:19918555-19918574 | None:intergenic | 20.0% |
!!! | TTCTGAATAAACTTGTTATT+TGG | + | chr5.1:19915124-19915143 | MS.gene97736:intron | 20.0% |
!!! | TTTTTAAAAATCAGTACCAT+AGG | - | chr5.1:19917504-19917523 | None:intergenic | 20.0% |
!!! | TTTTTATATCTTGCTGAAAT+GGG | - | chr5.1:19919239-19919258 | None:intergenic | 20.0% |
! | AAACGACAACTAAAAATGAA+TGG | - | chr5.1:19917748-19917767 | None:intergenic | 25.0% |
! | AACAACTAAAAAGGAAGAAA+GGG | + | chr5.1:19917995-19918014 | MS.gene97736:intron | 25.0% |
! | ACAATTTGTATATAGGAAAC+CGG | - | chr5.1:19915363-19915382 | None:intergenic | 25.0% |
! | ATATTTATCACTTGATTCAC+TGG | - | chr5.1:19919147-19919166 | None:intergenic | 25.0% |
! | ATGCATTTAATGTGTAGTAT+CGG | - | chr5.1:19916903-19916922 | None:intergenic | 25.0% |
! | ATTATCCATTATCCTTTGTT+TGG | + | chr5.1:19915006-19915025 | MS.gene97736:intron | 25.0% |
! | ATTCTGATTCAGGAATATTT+AGG | + | chr5.1:19918829-19918848 | MS.gene97736:CDS | 25.0% |
! | CACAACTACAATTTGTATAT+AGG | - | chr5.1:19915370-19915389 | None:intergenic | 25.0% |
! | CCGTTATTTATTTATCATAC+TGG | + | chr5.1:19916136-19916155 | MS.gene97736:intron | 25.0% |
! | CGTATCTTCAATAAAATTCT+AGG | + | chr5.1:19916940-19916959 | MS.gene97736:intron | 25.0% |
! | GAAAAGAAATCTGAAGATTA+TGG | + | chr5.1:19918881-19918900 | MS.gene97736:CDS | 25.0% |
! | GAGGATTTAATATATTTGCT+GGG | - | chr5.1:19917613-19917632 | None:intergenic | 25.0% |
! | TACAAAAGCAACAACTAAAA+AGG | + | chr5.1:19917986-19918005 | MS.gene97736:intron | 25.0% |
! | TATAAAAGAGACACTAGTAA+AGG | - | chr5.1:19916095-19916114 | None:intergenic | 25.0% |
! | TATTATTTCAGAAACTTTCC+TGG | + | chr5.1:19916234-19916253 | MS.gene97736:intron | 25.0% |
! | TATTTAATTAGTAAACCCTG+TGG | + | chr5.1:19914878-19914897 | MS.gene97736:intron | 25.0% |
! | TGAGGATTTAATATATTTGC+TGG | - | chr5.1:19917614-19917633 | None:intergenic | 25.0% |
! | TTATCTAAATTCTAGACCAT+GGG | + | chr5.1:19918034-19918053 | MS.gene97736:intron | 25.0% |
! | TTATGGTCCATCAAAATATT+AGG | - | chr5.1:19916748-19916767 | None:intergenic | 25.0% |
! | TTCTGATTCAGGAATATTTA+GGG | + | chr5.1:19918830-19918849 | MS.gene97736:CDS | 25.0% |
! | TTGGTTACTAATGAAATCAA+GGG | + | chr5.1:19917215-19917234 | MS.gene97736:CDS | 25.0% |
! | TTTGTAACAAATTTATCCCA+TGG | - | chr5.1:19918053-19918072 | None:intergenic | 25.0% |
!! | AATGCATGCAAAATCATTTT+TGG | + | chr5.1:19917397-19917416 | MS.gene97736:intron | 25.0% |
!! | ACATGCAAGAATAATTTTGA+AGG | - | chr5.1:19914428-19914447 | None:intergenic | 25.0% |
!! | ATTCTTTTTGTGTCTTACAT+TGG | + | chr5.1:19916340-19916359 | MS.gene97736:intron | 25.0% |
!! | ATTTGCTGATGTAATGATTA+TGG | + | chr5.1:19915322-19915341 | MS.gene97736:intron | 25.0% |
!! | CTTAAATTTTATACAACTCC+AGG | + | chr5.1:19918378-19918397 | MS.gene97736:CDS | 25.0% |
!! | CTTTTTATATCTTGCTGAAA+TGG | - | chr5.1:19919240-19919259 | None:intergenic | 25.0% |
!! | TTCTTTTTGTGTCTTACATT+GGG | + | chr5.1:19916341-19916360 | MS.gene97736:intron | 25.0% |
!!! | AAAATCATTTTTGGAAGCTT+GGG | + | chr5.1:19917406-19917425 | MS.gene97736:intron | 25.0% |
!!! | ACACAGAATCAATTTGTTTT+GGG | + | chr5.1:19918429-19918448 | MS.gene97736:CDS | 25.0% |
!!! | ATACATATTTTGGTCACTTT+TGG | - | chr5.1:19918295-19918314 | None:intergenic | 25.0% |
!!! | ATTTCCACCTAATATTTTGA+TGG | + | chr5.1:19916738-19916757 | MS.gene97736:CDS | 25.0% |
!!! | CATTTTTAGTTGTCGTTTTA+AGG | + | chr5.1:19917750-19917769 | MS.gene97736:intron | 25.0% |
!!! | TACACAGAATCAATTTGTTT+TGG | + | chr5.1:19918428-19918447 | MS.gene97736:CDS | 25.0% |
!!! | TAGAATTTTTGAAGCGTAAA+AGG | + | chr5.1:19914537-19914556 | MS.gene97736:CDS | 25.0% |
AAAATTCTAGGTTTCAACTG+TGG | + | chr5.1:19916952-19916971 | MS.gene97736:intron | 30.0% | |
AAAGGATGCAATTCAACAAA+AGG | - | chr5.1:19914175-19914194 | None:intergenic | 30.0% | |
AATATGGTATGTATCTGTGT+TGG | + | chr5.1:19914831-19914850 | MS.gene97736:intron | 30.0% | |
AATTTACCATGTCCTCTTTA+CGG | + | chr5.1:19915530-19915549 | MS.gene97736:intron | 30.0% | |
AGTACATAAATGACATTGAC+AGG | - | chr5.1:19916320-19916339 | None:intergenic | 30.0% | |
ATACCATATTTAGAAGCTTC+TGG | - | chr5.1:19914821-19914840 | None:intergenic | 30.0% | |
ATATAAAAAGTCAGGCAATG+AGG | + | chr5.1:19919250-19919269 | MS.gene97736:CDS | 30.0% | |
ATATGAGAAAATGGCAAACA+AGG | + | chr5.1:19915884-19915903 | MS.gene97736:CDS | 30.0% | |
ATCAGCAAATAAGAACTTCT+TGG | - | chr5.1:19915312-19915331 | None:intergenic | 30.0% | |
ATCTTCTGCAAATAAACCAA+AGG | - | chr5.1:19914794-19914813 | None:intergenic | 30.0% | |
ATTCCGTGAATATGAGAAAA+TGG | + | chr5.1:19915875-19915894 | MS.gene97736:CDS | 30.0% | |
ATTGCCAAAACTAACATACT+GGG | - | chr5.1:19917688-19917707 | None:intergenic | 30.0% | |
CAAATAAGAACTTCTTGGAA+AGG | - | chr5.1:19915307-19915326 | None:intergenic | 30.0% | |
CAACAACTAAAAAGGAAGAA+AGG | + | chr5.1:19917994-19918013 | MS.gene97736:intron | 30.0% | |
CATTGAAAAACCATGTTAGA+AGG | - | chr5.1:19917546-19917565 | None:intergenic | 30.0% | |
CGCAAGAATTTCAATGTTTA+TGG | + | chr5.1:19915086-19915105 | MS.gene97736:intron | 30.0% | |
CTAATCCAAACAAAGGATAA+TGG | - | chr5.1:19915014-19915033 | None:intergenic | 30.0% | |
CTTATCTAAATTCTAGACCA+TGG | + | chr5.1:19918033-19918052 | MS.gene97736:intron | 30.0% | |
GTAAGATGTTTCACATTTCA+CGG | - | chr5.1:19914469-19914488 | None:intergenic | 30.0% | |
GTAATGATTATGGTCTATGA+CGG | + | chr5.1:19915332-19915351 | MS.gene97736:intron | 30.0% | |
GTGAGATAAAAATACTGTCA+AGG | - | chr5.1:19917855-19917874 | None:intergenic | 30.0% | |
GTTGGTTACTAATGAAATCA+AGG | + | chr5.1:19917214-19917233 | MS.gene97736:CDS | 30.0% | |
GTTTCACGATAGAAAATGAA+TGG | - | chr5.1:19915422-19915441 | None:intergenic | 30.0% | |
TAAGTTTGATACAAGCGATT+TGG | + | chr5.1:19914706-19914725 | MS.gene97736:CDS | 30.0% | |
TCAGCAAGATATAAAAAGTC+AGG | + | chr5.1:19919242-19919261 | MS.gene97736:CDS | 30.0% | |
TGAAATGTGAAACATCTTAC+AGG | + | chr5.1:19914469-19914488 | MS.gene97736:intron | 30.0% | |
TGCATTTAATGTGTAGTATC+GGG | - | chr5.1:19916902-19916921 | None:intergenic | 30.0% | |
TTTGCAAAGAAGTTCTTCAT+GGG | - | chr5.1:19917070-19917089 | None:intergenic | 30.0% | |
! | AAAGTCACATTTTTCATGAG+TGG | + | chr5.1:19915759-19915778 | MS.gene97736:CDS | 30.0% |
! | AATAGACGCAAAGTTGATTT+GGG | - | chr5.1:19916263-19916282 | None:intergenic | 30.0% |
! | ACTGATATTTTGTCAAGTGA+TGG | + | chr5.1:19916673-19916692 | MS.gene97736:CDS | 30.0% |
! | ATACTTTTACCACTTCAATG+TGG | + | chr5.1:19914932-19914951 | MS.gene97736:intron | 30.0% |
! | ATTATGCTTTGCGTTGATAT+CGG | + | chr5.1:19914224-19914243 | MS.gene97736:intron | 30.0% |
! | CATGGTCTAGAATTTAGATA+AGG | - | chr5.1:19918035-19918054 | None:intergenic | 30.0% |
! | TGTTTCAGTTTGTTCATTGT+TGG | + | chr5.1:19914338-19914357 | MS.gene97736:intron | 30.0% |
! | TTCATTTTCCAAAGAATCAC+CGG | + | chr5.1:19914252-19914271 | MS.gene97736:intron | 30.0% |
!! | AGGATAATGGATAATGAAGA+TGG | - | chr5.1:19915001-19915020 | None:intergenic | 30.0% |
!! | CAAAATCATTTTTGGAAGCT+TGG | + | chr5.1:19917405-19917424 | MS.gene97736:intron | 30.0% |
!! | GGATAATGGATAATGAAGAT+GGG | - | chr5.1:19915000-19915019 | None:intergenic | 30.0% |
!! | TCATGGATATTATTGGTTTC+TGG | + | chr5.1:19917468-19917487 | MS.gene97736:intron | 30.0% |
!! | TTCTGGAATTCTAAATCCTA+TGG | + | chr5.1:19917485-19917504 | MS.gene97736:intron | 30.0% |
!!! | CACAGAATCAATTTGTTTTG+GGG | + | chr5.1:19918430-19918449 | MS.gene97736:CDS | 30.0% |
!!! | TTGCCATTTTCTCATATTCA+CGG | - | chr5.1:19915881-19915900 | None:intergenic | 30.0% |
AAGTACTTATTGCGGAGAAA+GGG | - | chr5.1:19917887-19917906 | None:intergenic | 35.0% | |
AATACTGTCAAGGATCTTCA+AGG | - | chr5.1:19917845-19917864 | None:intergenic | 35.0% | |
ACCTTCTTGAGAAACACTTT+AGG | - | chr5.1:19915226-19915245 | None:intergenic | 35.0% | |
ACTACAATCTCCATACTAGT+CGG | - | chr5.1:19915499-19915518 | None:intergenic | 35.0% | |
AGACACATAAACAGAATCTC+TGG | - | chr5.1:19918981-19919000 | None:intergenic | 35.0% | |
AGCATTCCAATGTATAGCAT+GGG | - | chr5.1:19916390-19916409 | None:intergenic | 35.0% | |
AGCTTTCATGATACAAAGCA+GGG | - | chr5.1:19918746-19918765 | None:intergenic | 35.0% | |
ATGAGATAACAAGTCTGAAG+AGG | - | chr5.1:19917142-19917161 | None:intergenic | 35.0% | |
ATGCCCTTAAGTACTTATTG+CGG | - | chr5.1:19917895-19917914 | None:intergenic | 35.0% | |
ATGGAAGCTAATCCAAACAA+AGG | - | chr5.1:19915021-19915040 | None:intergenic | 35.0% | |
CAAATCAACTTTGCGTCTAT+TGG | + | chr5.1:19916262-19916281 | MS.gene97736:CDS | 35.0% | |
CAACTAACACTGCATTCTTT+AGG | + | chr5.1:19918656-19918675 | MS.gene97736:intron | 35.0% | |
CATTGCCAAAACTAACATAC+TGG | - | chr5.1:19917689-19917708 | None:intergenic | 35.0% | |
CTTGAAGAACAGATTTGCAA+GGG | + | chr5.1:19919202-19919221 | MS.gene97736:CDS | 35.0% | |
CTTTGCAAAGAAGTTCTTCA+TGG | - | chr5.1:19917071-19917090 | None:intergenic | 35.0% | |
GAACAGCAAATGGAATTTGA+AGG | + | chr5.1:19916064-19916083 | MS.gene97736:CDS | 35.0% | |
GAATATGCATGTGATGTTGA+TGG | + | chr5.1:19916005-19916024 | MS.gene97736:CDS | 35.0% | |
GAGATATGCACTTCTTAACA+GGG | + | chr5.1:19917032-19917051 | MS.gene97736:CDS | 35.0% | |
GATGCTTATTCATTCAAGCT+TGG | + | chr5.1:19917095-19917114 | MS.gene97736:CDS | 35.0% | |
GCAAAAATAGAGAGCTAATG+TGG | - | chr5.1:19915252-19915271 | None:intergenic | 35.0% | |
GCTATAACTTCCTTCTAACA+TGG | + | chr5.1:19917533-19917552 | MS.gene97736:intron | 35.0% | |
GGCATAAGAAATTGTCATAC+CGG | - | chr5.1:19916299-19916318 | None:intergenic | 35.0% | |
TAAGAACTTCTTGGAAAGGT+CGG | - | chr5.1:19915303-19915322 | None:intergenic | 35.0% | |
TAAGTACTTATTGCGGAGAA+AGG | - | chr5.1:19917888-19917907 | None:intergenic | 35.0% | |
TAATTGAAGCTACTGTACGA+TGG | - | chr5.1:19915040-19915059 | None:intergenic | 35.0% | |
TCTCCGCAATAAGTACTTAA+GGG | + | chr5.1:19917889-19917908 | MS.gene97736:intron | 35.0% | |
TCTCTATGCCCAAAAATGAA+GGG | - | chr5.1:19919385-19919404 | None:intergenic | 35.0% | |
TCTTCAAATTCCTCCTTTGT+TGG | - | chr5.1:19914770-19914789 | None:intergenic | 35.0% | |
TGAAACATCTTACAGGTAGA+AGG | + | chr5.1:19914476-19914495 | MS.gene97736:intron | 35.0% | |
TGAGATAACAAGTCTGAAGA+GGG | - | chr5.1:19917141-19917160 | None:intergenic | 35.0% | |
TGGAGGATCATTATTTGTAC+AGG | + | chr5.1:19916433-19916452 | MS.gene97736:CDS | 35.0% | |
TGGTCCATCAAAATATTAGG+TGG | - | chr5.1:19916745-19916764 | None:intergenic | 35.0% | |
TGTTAGAAGGAAGTTATAGC+TGG | - | chr5.1:19917533-19917552 | None:intergenic | 35.0% | |
TTACATTGGGCTGTATTTCA+GGG | + | chr5.1:19916354-19916373 | MS.gene97736:intron | 35.0% | |
TTCACATTTCACGGTTAGAT+CGG | - | chr5.1:19914460-19914479 | None:intergenic | 35.0% | |
TTCTCCGCAATAAGTACTTA+AGG | + | chr5.1:19917888-19917907 | MS.gene97736:intron | 35.0% | |
TTGAAGAACAGATTTGCAAG+GGG | + | chr5.1:19919203-19919222 | MS.gene97736:CDS | 35.0% | |
TTGCAAAGAAGTTCTTCATG+GGG | - | chr5.1:19917069-19917088 | None:intergenic | 35.0% | |
TTGTCTGAGAGAGGATATTA+CGG | + | chr5.1:19918203-19918222 | MS.gene97736:CDS | 35.0% | |
TTTATGTGTCTAGCGATTCT+TGG | + | chr5.1:19918990-19919009 | MS.gene97736:intron | 35.0% | |
! | AAACTCCTTTTCCAAGTAAG+TGG | - | chr5.1:19915949-19915968 | None:intergenic | 35.0% |
! | AATAGACTTACCGACTAGTA+TGG | + | chr5.1:19915486-19915505 | MS.gene97736:intron | 35.0% |
! | ATGCTTTAGCTTATTCGAGT+TGG | - | chr5.1:19914199-19914218 | None:intergenic | 35.0% |
! | CAATAGACGCAAAGTTGATT+TGG | - | chr5.1:19916264-19916283 | None:intergenic | 35.0% |
! | CTTACTTGGAAAAGGAGTTT+TGG | + | chr5.1:19915949-19915968 | MS.gene97736:CDS | 35.0% |
! | TCACATTTTTCATGAGTGGA+AGG | + | chr5.1:19915763-19915782 | MS.gene97736:CDS | 35.0% |
! | TCATTTTCCAAAGAATCACC+GGG | + | chr5.1:19914253-19914272 | MS.gene97736:intron | 35.0% |
! | TCCTAAAGTGTTTCTCAAGA+AGG | + | chr5.1:19915222-19915241 | MS.gene97736:intron | 35.0% |
! | TGCTGTTTAGTATGTTTGCA+TGG | + | chr5.1:19916406-19916425 | MS.gene97736:CDS | 35.0% |
! | TTGATACAAGCGATTTGGAT+TGG | + | chr5.1:19914711-19914730 | MS.gene97736:CDS | 35.0% |
! | TTTGAACAGCCTTATAGACA+GGG | - | chr5.1:19916774-19916793 | None:intergenic | 35.0% |
!! | ACTCAGCTTTGGAATTTGAA+AGG | + | chr5.1:19916626-19916645 | MS.gene97736:CDS | 35.0% |
!! | CTCAGCTTTGGAATTTGAAA+GGG | + | chr5.1:19916627-19916646 | MS.gene97736:CDS | 35.0% |
!! | CTCTGAAACATATCTGACAA+AGG | - | chr5.1:19918324-19918343 | None:intergenic | 35.0% |
!! | TCTCTGCTTTAAGAGAAGAA+GGG | - | chr5.1:19918863-19918882 | None:intergenic | 35.0% |
!! | TGAATTTTGCACTTGGTGAT+TGG | + | chr5.1:19916983-19917002 | MS.gene97736:CDS | 35.0% |
!! | TTCTCTGCTTTAAGAGAAGA+AGG | - | chr5.1:19918864-19918883 | None:intergenic | 35.0% |
!! | TTTTGAACAGCCTTATAGAC+AGG | - | chr5.1:19916775-19916794 | None:intergenic | 35.0% |
!!! | ATCCAGATGTGTTTTTCAAG+CGG | + | chr5.1:19914675-19914694 | MS.gene97736:CDS | 35.0% |
AAAACTTGGTATGGTATCCC+TGG | + | chr5.1:19916601-19916620 | MS.gene97736:CDS | 40.0% | |
AAATCTCTTGACCTCATCTG+TGG | + | chr5.1:19918165-19918184 | MS.gene97736:CDS | 40.0% | |
AACAGATTTGCAAGGGGAAA+TGG | + | chr5.1:19919209-19919228 | MS.gene97736:CDS | 40.0% | |
AACATCTTACAGGTAGAAGG+AGG | + | chr5.1:19914479-19914498 | MS.gene97736:intron | 40.0% | |
AACGTGATGAATAGAAGTGG+AGG | + | chr5.1:19914605-19914624 | MS.gene97736:CDS | 40.0% | |
AAGGTTATTACAAACTCCCC+TGG | - | chr5.1:19916799-19916818 | None:intergenic | 40.0% | |
AAGTGCCTTCCATTGAGATT+GGG | + | chr5.1:19919336-19919355 | MS.gene97736:CDS | 40.0% | |
AATCATGCAAAACATTGCCC+CGG | - | chr5.1:19914274-19914293 | None:intergenic | 40.0% | |
AATCTCTTGACCTCATCTGT+GGG | + | chr5.1:19918166-19918185 | MS.gene97736:CDS | 40.0% | |
ACAGAACCCATGCTATACAT+TGG | + | chr5.1:19916381-19916400 | MS.gene97736:CDS | 40.0% | |
AGAAGATTCACATGCACTGT+TGG | - | chr5.1:19918718-19918737 | None:intergenic | 40.0% | |
AGCATTAACTATCAGCACTG+CGG | + | chr5.1:19916571-19916590 | MS.gene97736:intron | 40.0% | |
AGGTAGAGTACGATTATCTG+AGG | + | chr5.1:19914499-19914518 | MS.gene97736:CDS | 40.0% | |
AGTGTTTCTTCTCATTCGCA+TGG | + | chr5.1:19917246-19917265 | MS.gene97736:CDS | 40.0% | |
ATAAGGCTGTTCAAAAGCCA+GGG | + | chr5.1:19916779-19916798 | MS.gene97736:CDS | 40.0% | |
ATCACTGTCGTTATCCACAA+TGG | - | chr5.1:19918808-19918827 | None:intergenic | 40.0% | |
ATCAGTGGGAGAAGTTGAAA+AGG | - | chr5.1:19916036-19916055 | None:intergenic | 40.0% | |
CAGCATTCCAATGTATAGCA+TGG | - | chr5.1:19916391-19916410 | None:intergenic | 40.0% | |
CATCTATCCTTTCCGTAAAG+AGG | - | chr5.1:19915545-19915564 | None:intergenic | 40.0% | |
CCAAAACTAACATACTGGGA+GGG | - | chr5.1:19917684-19917703 | None:intergenic | 40.0% | |
CCACACTCTGGATTATTTGT+TGG | - | chr5.1:19918408-19918427 | None:intergenic | 40.0% | |
CCATAAAGTCCCTGTCTATA+AGG | + | chr5.1:19916762-19916781 | MS.gene97736:CDS | 40.0% | |
CCTTATAGACAGGGACTTTA+TGG | - | chr5.1:19916765-19916784 | None:intergenic | 40.0% | |
CCTTGAAGAACAGATTTGCA+AGG | + | chr5.1:19919201-19919220 | MS.gene97736:CDS | 40.0% | |
CCTTGCAAATCTGTTCTTCA+AGG | - | chr5.1:19919204-19919223 | None:intergenic | 40.0% | |
CTAAAAAGGAAGAAAGGGTG+TGG | + | chr5.1:19918000-19918019 | MS.gene97736:intron | 40.0% | |
CTCTCTATGCCCAAAAATGA+AGG | - | chr5.1:19919386-19919405 | None:intergenic | 40.0% | |
CTGGTTGTAAACTTGAATCC+AGG | - | chr5.1:19915699-19915718 | None:intergenic | 40.0% | |
CTTACATTGGGCTGTATTTC+AGG | + | chr5.1:19916353-19916372 | MS.gene97736:intron | 40.0% | |
GAAATTGGTCGTGGGAAAAT+GGG | + | chr5.1:19915975-19915994 | MS.gene97736:CDS | 40.0% | |
GACAGTGATGATTCTGATTC+AGG | + | chr5.1:19918819-19918838 | MS.gene97736:CDS | 40.0% | |
GAGAGAGGATATTACGGATA+TGG | + | chr5.1:19918209-19918228 | MS.gene97736:CDS | 40.0% | |
GAGCTTTCATGATACAAAGC+AGG | - | chr5.1:19918747-19918766 | None:intergenic | 40.0% | |
GCTAACGTGATGAATAGAAG+TGG | + | chr5.1:19914602-19914621 | MS.gene97736:CDS | 40.0% | |
GCTCCAGAAGCTTCTAAATA+TGG | + | chr5.1:19914815-19914834 | MS.gene97736:CDS | 40.0% | |
GCTTAGTTTCGAAGTAGTTG+TGG | + | chr5.1:19914301-19914320 | MS.gene97736:intron | 40.0% | |
GCTTTCATGATACAAAGCAG+GGG | - | chr5.1:19918745-19918764 | None:intergenic | 40.0% | |
GGAGATATGCACTTCTTAAC+AGG | + | chr5.1:19917031-19917050 | MS.gene97736:CDS | 40.0% | |
GGAGGAATTTGAAGATCCTT+TGG | + | chr5.1:19914775-19914794 | MS.gene97736:CDS | 40.0% | |
GTGCATATGTTAATGCCACA+GGG | - | chr5.1:19914896-19914915 | None:intergenic | 40.0% | |
TACCACTTCAATGTGGCTTT+CGG | + | chr5.1:19914939-19914958 | MS.gene97736:intron | 40.0% | |
TAGAGTACGATTATCTGAGG+AGG | + | chr5.1:19914502-19914521 | MS.gene97736:CDS | 40.0% | |
TAGTATGTTTGCATGGCATG+TGG | + | chr5.1:19916413-19916432 | MS.gene97736:CDS | 40.0% | |
TATAAGGCTGTTCAAAAGCC+AGG | + | chr5.1:19916778-19916797 | MS.gene97736:CDS | 40.0% | |
TATCTGAGGAGGCTAGAAAT+GGG | + | chr5.1:19914513-19914532 | MS.gene97736:CDS | 40.0% | |
TCACTGTCGTTATCCACAAT+GGG | - | chr5.1:19918807-19918826 | None:intergenic | 40.0% | |
TCCTGTGTATTCTCCAACAA+AGG | + | chr5.1:19914754-19914773 | MS.gene97736:CDS | 40.0% | |
TCCTTTGTTGGAGAATACAC+AGG | - | chr5.1:19914758-19914777 | None:intergenic | 40.0% | |
TCTCTGGCAGATATACATGA+TGG | - | chr5.1:19918965-19918984 | None:intergenic | 40.0% | |
TGAGCAGGAAGATGTGATAT+TGG | + | chr5.1:19918251-19918270 | MS.gene97736:CDS | 40.0% | |
TGTGCATATGTTAATGCCAC+AGG | - | chr5.1:19914897-19914916 | None:intergenic | 40.0% | |
TGTGTATTCTCCAACAAAGG+AGG | + | chr5.1:19914757-19914776 | MS.gene97736:CDS | 40.0% | |
TTATCTGAGGAGGCTAGAAA+TGG | + | chr5.1:19914512-19914531 | MS.gene97736:CDS | 40.0% | |
TTCAAAACATTCTGAGCAGC+AGG | + | chr5.1:19918905-19918924 | MS.gene97736:CDS | 40.0% | |
TTCATTAAAACAACCCCAGC+AGG | - | chr5.1:19915669-19915688 | None:intergenic | 40.0% | |
TTCCGCTTGAAAAACACATC+TGG | - | chr5.1:19914680-19914699 | None:intergenic | 40.0% | |
TTCCTGAAGGAAAAAGCAAC+AGG | + | chr5.1:19919102-19919121 | MS.gene97736:CDS | 40.0% | |
TTGAAGAAAGTCCTTCCTGA+AGG | + | chr5.1:19919089-19919108 | MS.gene97736:CDS | 40.0% | |
TTTCAGAGAGCTGAAGCAAA+TGG | + | chr5.1:19918336-19918355 | MS.gene97736:CDS | 40.0% | |
TTTCCCCAAGAGAACATCAA+AGG | - | chr5.1:19916710-19916729 | None:intergenic | 40.0% | |
! | CATTTTCCAAAGAATCACCG+GGG | + | chr5.1:19914254-19914273 | MS.gene97736:intron | 40.0% |
! | CTGTTTAAAACCTCATGCAG+TGG | - | chr5.1:19918624-19918643 | None:intergenic | 40.0% |
! | GAAGCAGTGAATTTTGCACT+TGG | + | chr5.1:19916976-19916995 | MS.gene97736:CDS | 40.0% |
! | TTCTGAAAGAGAGCAAAGAG+TGG | - | chr5.1:19918511-19918530 | None:intergenic | 40.0% |
! | TTGTCAAGTGATGGAGAAGA+TGG | + | chr5.1:19916682-19916701 | MS.gene97736:CDS | 40.0% |
!! | AAGGAGTTTTGGCAGGAAAT+TGG | + | chr5.1:19915960-19915979 | MS.gene97736:CDS | 40.0% |
!! | ACTTACATTTTTGGGAGCAG+AGG | - | chr5.1:19918547-19918566 | None:intergenic | 40.0% |
!! | AGCTTTGGAATTTGAAAGGG+TGG | + | chr5.1:19916630-19916649 | MS.gene97736:CDS | 40.0% |
!! | CAAAGTTGATTTGGGTAACC+AGG | - | chr5.1:19916255-19916274 | None:intergenic | 40.0% |
!! | GTTTTAATGAAGGAGCAACC+TGG | + | chr5.1:19915678-19915697 | MS.gene97736:CDS | 40.0% |
!! | TAGCTTATTCGAGTTGGCAA+AGG | - | chr5.1:19914193-19914212 | None:intergenic | 40.0% |
!! | TCTATTGGAAACGTCGATTC+CGG | + | chr5.1:19916277-19916296 | MS.gene97736:CDS | 40.0% |
!! | TTGGTGATTGGTTTCCTCTT+GGG | + | chr5.1:19916995-19917014 | MS.gene97736:CDS | 40.0% |
!!! | AGATGTGTTTTTCAAGCGGA+AGG | + | chr5.1:19914679-19914698 | MS.gene97736:CDS | 40.0% |
!!! | TGCTGGGGTTGTTTTAATGA+AGG | + | chr5.1:19915668-19915687 | MS.gene97736:CDS | 40.0% |
!!! | TGTTGCTTTTTCCTTCAGGA+AGG | - | chr5.1:19919103-19919122 | None:intergenic | 40.0% |
AAGAGTGGATGCAGCAGAAA+AGG | - | chr5.1:19918496-19918515 | None:intergenic | 45.0% | |
AAGGAAACGTCAGACACTTC+TGG | - | chr5.1:19918477-19918496 | None:intergenic | 45.0% | |
AATTCCAAAGCTGAGTGACC+AGG | - | chr5.1:19916622-19916641 | None:intergenic | 45.0% | |
ACACACTCTTTGTCTGAGAG+AGG | + | chr5.1:19918194-19918213 | MS.gene97736:CDS | 45.0% | |
ACACTGCATTCTTTAGGCTG+AGG | + | chr5.1:19918662-19918681 | MS.gene97736:intron | 45.0% | |
ACCACTTCAATGTGGCTTTC+GGG | + | chr5.1:19914940-19914959 | MS.gene97736:intron | 45.0% | |
ACCATGTCCTCTTTACGGAA+AGG | + | chr5.1:19915535-19915554 | MS.gene97736:intron | 45.0% | |
ACTGCATTCTTTAGGCTGAG+GGG | + | chr5.1:19918664-19918683 | MS.gene97736:intron | 45.0% | |
AGTTCTTCATGGGGCAGTAA+AGG | - | chr5.1:19917060-19917079 | None:intergenic | 45.0% | |
ATCAGCTTGGGAACAGCAAA+TGG | + | chr5.1:19916054-19916073 | MS.gene97736:CDS | 45.0% | |
ATTCCAAAGCTGAGTGACCA+GGG | - | chr5.1:19916621-19916640 | None:intergenic | 45.0% | |
CACTGCATTCTTTAGGCTGA+GGG | + | chr5.1:19918663-19918682 | MS.gene97736:intron | 45.0% | |
CATAACAGTCACGTTTGCAC+AGG | - | chr5.1:19917287-19917306 | None:intergenic | 45.0% | |
CTTATTGCGGAGAAAGGGAT+AGG | - | chr5.1:19917882-19917901 | None:intergenic | 45.0% | |
CTTCAGTATCCCATTCAGCA+AGG | - | chr5.1:19915737-19915756 | None:intergenic | 45.0% | |
GAGCCTTTGATGTTCTCTTG+GGG | + | chr5.1:19916704-19916723 | MS.gene97736:CDS | 45.0% | |
GCCAAAACTAACATACTGGG+AGG | - | chr5.1:19917685-19917704 | None:intergenic | 45.0% | |
GGAAATTGGTCGTGGGAAAA+TGG | + | chr5.1:19915974-19915993 | MS.gene97736:CDS | 45.0% | |
GGAGAATACACAGGACATTC+TGG | - | chr5.1:19914749-19914768 | None:intergenic | 45.0% | |
GGAGCCTTTGATGTTCTCTT+GGG | + | chr5.1:19916703-19916722 | MS.gene97736:CDS | 45.0% | |
GTAACCAACTAGCACAATGC+TGG | - | chr5.1:19917203-19917222 | None:intergenic | 45.0% | |
GTTTCCAGCATTGTGCTAGT+TGG | + | chr5.1:19917196-19917215 | MS.gene97736:CDS | 45.0% | |
TAAGGCTGTTCAAAAGCCAG+GGG | + | chr5.1:19916780-19916799 | MS.gene97736:CDS | 45.0% | |
TATGTTTGCATGGCATGTGG+AGG | + | chr5.1:19916416-19916435 | MS.gene97736:CDS | 45.0% | |
TCCTTTCCGTAAAGAGGACA+TGG | - | chr5.1:19915539-19915558 | None:intergenic | 45.0% | |
TGCAGCAAAGATGTTTGAGC+AGG | + | chr5.1:19918236-19918255 | MS.gene97736:CDS | 45.0% | |
TGGAGCCTTTGATGTTCTCT+TGG | + | chr5.1:19916702-19916721 | MS.gene97736:CDS | 45.0% | |
TTACCATGGCGTAAGCATAC+AGG | - | chr5.1:19917342-19917361 | None:intergenic | 45.0% | |
TTGAGAGGTTCACCTTCTTG+TGG | + | chr5.1:19914635-19914654 | MS.gene97736:CDS | 45.0% | |
TTTGCTGCAACCTCTCTCTT+CGG | - | chr5.1:19919307-19919326 | None:intergenic | 45.0% | |
TTTGGCAGGAAATTGGTCGT+GGG | + | chr5.1:19915967-19915986 | MS.gene97736:CDS | 45.0% | |
TTTGGCCCAATCTCAATGGA+AGG | - | chr5.1:19919344-19919363 | None:intergenic | 45.0% | |
! | AATCCGAGGCCCTTCATTTT+TGG | + | chr5.1:19919373-19919392 | MS.gene97736:CDS | 45.0% |
! | ATGTCTTCCTGCCACTTACT+TGG | + | chr5.1:19915935-19915954 | MS.gene97736:CDS | 45.0% |
! | GAAGTGCCTTCCATTGAGAT+TGG | + | chr5.1:19919335-19919354 | MS.gene97736:CDS | 45.0% |
! | GCTTTGCGTTGATATCGGTT+AGG | + | chr5.1:19914229-19914248 | MS.gene97736:intron | 45.0% |
! | GGAGCGTCAAAAACTTGGTA+TGG | + | chr5.1:19916592-19916611 | MS.gene97736:CDS | 45.0% |
! | GGATTATTTGTTGGCAGTCC+TGG | - | chr5.1:19918399-19918418 | None:intergenic | 45.0% |
! | TCCTGCCACTTACTTGGAAA+AGG | + | chr5.1:19915941-19915960 | MS.gene97736:CDS | 45.0% |
! | TCCTTTTCCAAGTAAGTGGC+AGG | - | chr5.1:19915945-19915964 | None:intergenic | 45.0% |
! | TTTTGGCAGGAAATTGGTCG+TGG | + | chr5.1:19915966-19915985 | MS.gene97736:CDS | 45.0% |
!! | ACGTCAGACACTTCTGGTTT+AGG | - | chr5.1:19918471-19918490 | None:intergenic | 45.0% |
!! | ATCCGAGGCCCTTCATTTTT+GGG | + | chr5.1:19919374-19919393 | MS.gene97736:CDS | 45.0% |
!! | CCCTCCCAGTATGTTAGTTT+TGG | + | chr5.1:19917681-19917700 | MS.gene97736:intron | 45.0% |
!! | CTTGGAAAAGGAGTTTTGGC+AGG | + | chr5.1:19915953-19915972 | MS.gene97736:CDS | 45.0% |
!! | CTTGGTGATTGGTTTCCTCT+TGG | + | chr5.1:19916994-19917013 | MS.gene97736:CDS | 45.0% |
!! | GGCTTTCGGGTGTGTTTTTA+GGG | + | chr5.1:19914953-19914972 | MS.gene97736:intron | 45.0% |
!! | TGGCTTTCGGGTGTGTTTTT+AGG | + | chr5.1:19914952-19914971 | MS.gene97736:intron | 45.0% |
!! | TGGTGATTGGTTTCCTCTTG+GGG | + | chr5.1:19916996-19917015 | MS.gene97736:CDS | 45.0% |
!!! | TGCCTGTTGCTTTTTCCTTC+AGG | - | chr5.1:19919107-19919126 | None:intergenic | 45.0% |
!!! | TGTGTTTTTCAAGCGGAAGG+TGG | + | chr5.1:19914682-19914701 | MS.gene97736:CDS | 45.0% |
AACCATGACTGAAGCCTGCA+TGG | - | chr5.1:19916834-19916853 | None:intergenic | 50.0% | |
AAGATCACCACCGAAGAGAG+AGG | + | chr5.1:19919294-19919313 | MS.gene97736:CDS | 50.0% | |
ACATTGCCCCGGTGATTCTT+TGG | - | chr5.1:19914263-19914282 | None:intergenic | 50.0% | |
ACCCGAAAGCCACATTGAAG+TGG | - | chr5.1:19914944-19914963 | None:intergenic | 50.0% | |
ACCTGACATCAAGCCCATTG+TGG | + | chr5.1:19918791-19918810 | MS.gene97736:CDS | 50.0% | |
ACTTCTCCCACTGATCAGCT+TGG | + | chr5.1:19916041-19916060 | MS.gene97736:CDS | 50.0% | |
ACTTGTCTGAGTGGCAGCAA+TGG | - | chr5.1:19914579-19914598 | None:intergenic | 50.0% | |
ATGGTCTATGACGGCGTTTC+CGG | + | chr5.1:19915341-19915360 | MS.gene97736:intron | 50.0% | |
CAGTATCCCATTCAGCAAGG+CGG | - | chr5.1:19915734-19915753 | None:intergenic | 50.0% | |
CATCATTGCTCCACTGCATG+AGG | + | chr5.1:19918611-19918630 | MS.gene97736:intron | 50.0% | |
CATCCTGTATGCTTACGCCA+TGG | + | chr5.1:19917336-19917355 | MS.gene97736:CDS | 50.0% | |
CCAAAGCGACTCAAAATCCG+AGG | + | chr5.1:19919359-19919378 | MS.gene97736:CDS | 50.0% | |
CTGTTCCCAAGCTGATCAGT+GGG | - | chr5.1:19916050-19916069 | None:intergenic | 50.0% | |
CTTCTCCCACTGATCAGCTT+GGG | + | chr5.1:19916042-19916061 | MS.gene97736:CDS | 50.0% | |
GCACTGAGCAAAGCTTACCA+TGG | - | chr5.1:19917356-19917375 | None:intergenic | 50.0% | |
GTTAGCAGCACTTGTCTGAG+TGG | - | chr5.1:19914588-19914607 | None:intergenic | 50.0% | |
TACCATGCAGGCTTCAGTCA+TGG | + | chr5.1:19916829-19916848 | MS.gene97736:CDS | 50.0% | |
TATCCCTGGTCACTCAGCTT+TGG | + | chr5.1:19916615-19916634 | MS.gene97736:CDS | 50.0% | |
TCGCTTTGGCCCAATCTCAA+TGG | - | chr5.1:19919348-19919367 | None:intergenic | 50.0% | |
TCTTGTGGCACGAGATTGCA+TGG | + | chr5.1:19914650-19914669 | MS.gene97736:CDS | 50.0% | |
TGAGTGCTTCTGTACCTGCT+GGG | + | chr5.1:19915652-19915671 | MS.gene97736:CDS | 50.0% | |
TGCAATCTCGTGCCACAAGA+AGG | - | chr5.1:19914650-19914669 | None:intergenic | 50.0% | |
TGCCCAAAAATGAAGGGCCT+CGG | - | chr5.1:19919379-19919398 | None:intergenic | 50.0% | |
TGTGTTTGCTCCCACAGATG+AGG | - | chr5.1:19918179-19918198 | None:intergenic | 50.0% | |
TTGAGTGCTTCTGTACCTGC+TGG | + | chr5.1:19915651-19915670 | MS.gene97736:CDS | 50.0% | |
! | ACTGCGGAGCGTCAAAAACT+TGG | + | chr5.1:19916587-19916606 | MS.gene97736:CDS | 50.0% |
! | AGTGGAGGAGATGCTTTGAG+AGG | + | chr5.1:19914620-19914639 | MS.gene97736:CDS | 50.0% |
! | TCCACAATGGGCTTGATGTC+AGG | - | chr5.1:19918795-19918814 | None:intergenic | 50.0% |
!! | CCTCGGATTTTGAGTCGCTT+TGG | - | chr5.1:19919362-19919381 | None:intergenic | 50.0% |
!! | GAGGGGCATTGTGAAGAACT+TGG | + | chr5.1:19918681-19918700 | MS.gene97736:CDS | 50.0% |
!! | GCAGGTACAGAAGCACTCAA+AGG | - | chr5.1:19915651-19915670 | None:intergenic | 50.0% |
AAGCCTGCATGGTACGCTCT+AGG | - | chr5.1:19916823-19916842 | None:intergenic | 55.0% | |
AGCCTGCATGGTACGCTCTA+GGG | - | chr5.1:19916822-19916841 | None:intergenic | 55.0% | |
CTCTTGGGGCTATTGCAAGC+AGG | + | chr5.1:19917010-19917029 | MS.gene97736:CDS | 55.0% | |
CTGCTTGCAATAGCCCCAAG+AGG | - | chr5.1:19917012-19917031 | None:intergenic | 55.0% | |
GAGTGCTTCTGTACCTGCTG+GGG | + | chr5.1:19915653-19915672 | MS.gene97736:CDS | 55.0% | |
GCACGAAGATATTGCAGCGC+TGG | + | chr5.1:19915912-19915931 | MS.gene97736:CDS | 55.0% | |
GCTGTTCCCAAGCTGATCAG+TGG | - | chr5.1:19916051-19916070 | None:intergenic | 55.0% | |
GGAGCAGAGGAACAGTCATG+AGG | - | chr5.1:19918534-19918553 | None:intergenic | 55.0% | |
TTCCCTAGAGCGTACCATGC+AGG | + | chr5.1:19916817-19916836 | MS.gene97736:CDS | 55.0% | |
!! | TGCATGGTACGCTCTAGGGA+AGG | - | chr5.1:19916818-19916837 | None:intergenic | 55.0% |
AGCCTCTCCGCCTTGCTGAA+TGG | + | chr5.1:19915724-19915743 | MS.gene97736:CDS | 60.0% | |
GCCTCTCCGCCTTGCTGAAT+GGG | + | chr5.1:19915725-19915744 | MS.gene97736:CDS | 60.0% | |
GCTGCAACCTCTCTCTTCGG+TGG | - | chr5.1:19919304-19919323 | None:intergenic | 60.0% | |
TCCCATTCAGCAAGGCGGAG+AGG | - | chr5.1:19915729-19915748 | None:intergenic | 60.0% | |
AAGGCGGAGAGGCTGCACTC+TGG | - | chr5.1:19915718-19915737 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.1 | gene | 19914128 | 19919421 | 19914128 | ID=MS.gene97736 |
chr5.1 | mRNA | 19914128 | 19919421 | 19914128 | ID=MS.gene97736.t1;Parent=MS.gene97736 |
chr5.1 | exon | 19914128 | 19914130 | 19914128 | ID=MS.gene97736.t1.exon1;Parent=MS.gene97736.t1 |
chr5.1 | CDS | 19914128 | 19914130 | 19914128 | ID=cds.MS.gene97736.t1;Parent=MS.gene97736.t1 |
chr5.1 | exon | 19914491 | 19914836 | 19914491 | ID=MS.gene97736.t1.exon2;Parent=MS.gene97736.t1 |
chr5.1 | CDS | 19914491 | 19914836 | 19914491 | ID=cds.MS.gene97736.t1;Parent=MS.gene97736.t1 |
chr5.1 | exon | 19915628 | 19915784 | 19915628 | ID=MS.gene97736.t1.exon3;Parent=MS.gene97736.t1 |
chr5.1 | CDS | 19915628 | 19915784 | 19915628 | ID=cds.MS.gene97736.t1;Parent=MS.gene97736.t1 |
chr5.1 | exon | 19915866 | 19916085 | 19915866 | ID=MS.gene97736.t1.exon4;Parent=MS.gene97736.t1 |
chr5.1 | CDS | 19915866 | 19916085 | 19915866 | ID=cds.MS.gene97736.t1;Parent=MS.gene97736.t1 |
chr5.1 | exon | 19916245 | 19916298 | 19916245 | ID=MS.gene97736.t1.exon5;Parent=MS.gene97736.t1 |
chr5.1 | CDS | 19916245 | 19916298 | 19916245 | ID=cds.MS.gene97736.t1;Parent=MS.gene97736.t1 |
chr5.1 | exon | 19916375 | 19916454 | 19916375 | ID=MS.gene97736.t1.exon6;Parent=MS.gene97736.t1 |
chr5.1 | CDS | 19916375 | 19916454 | 19916375 | ID=cds.MS.gene97736.t1;Parent=MS.gene97736.t1 |
chr5.1 | exon | 19916573 | 19916850 | 19916573 | ID=MS.gene97736.t1.exon7;Parent=MS.gene97736.t1 |
chr5.1 | CDS | 19916573 | 19916850 | 19916573 | ID=cds.MS.gene97736.t1;Parent=MS.gene97736.t1 |
chr5.1 | exon | 19916962 | 19917357 | 19916962 | ID=MS.gene97736.t1.exon8;Parent=MS.gene97736.t1 |
chr5.1 | CDS | 19916962 | 19917357 | 19916962 | ID=cds.MS.gene97736.t1;Parent=MS.gene97736.t1 |
chr5.1 | exon | 19918160 | 19918560 | 19918160 | ID=MS.gene97736.t1.exon9;Parent=MS.gene97736.t1 |
chr5.1 | CDS | 19918160 | 19918560 | 19918160 | ID=cds.MS.gene97736.t1;Parent=MS.gene97736.t1 |
chr5.1 | exon | 19918678 | 19918926 | 19918678 | ID=MS.gene97736.t1.exon10;Parent=MS.gene97736.t1 |
chr5.1 | CDS | 19918678 | 19918926 | 19918678 | ID=cds.MS.gene97736.t1;Parent=MS.gene97736.t1 |
chr5.1 | exon | 19919077 | 19919421 | 19919077 | ID=MS.gene97736.t1.exon11;Parent=MS.gene97736.t1 |
chr5.1 | CDS | 19919077 | 19919421 | 19919077 | ID=cds.MS.gene97736.t1;Parent=MS.gene97736.t1 |
Gene Sequence |
Protein sequence |