AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene98019

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene98019.t1 MTR_2g047838 99.422 173 1 0 1 173 1 173 4.81e-124 346
MS.gene98019.t1 MTR_8g089310 72.067 179 41 2 1 173 14 189 2.09e-87 254
MS.gene98019.t1 MTR_8g089310 72.067 179 41 2 1 173 1 176 3.46e-87 253
MS.gene98019.t1 MTR_8g089310 72.067 179 41 2 1 173 48 223 8.32e-87 254
MS.gene98019.t1 MTR_4g098500 59.483 116 44 2 2 117 5 117 5.89e-47 149
MS.gene98019.t1 MTR_4g098500 58.621 116 45 1 2 117 31 143 2.85e-46 149
MS.gene98019.t1 MTR_4g088850 43.182 88 50 0 44 131 40 127 2.45e-24 92.4
MS.gene98019.t1 MTR_4g088850 44.737 76 42 0 44 119 40 115 9.07e-22 86.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene98019.t1 AT4G20380 61.622 185 58 4 1 173 6 189 1.24e-63 194
MS.gene98019.t1 AT4G20380 61.622 185 58 4 1 173 6 189 1.24e-63 194
MS.gene98019.t1 AT4G20380 61.622 185 58 4 1 173 1 184 1.88e-63 193
MS.gene98019.t1 AT4G20380 61.622 185 58 4 1 173 1 184 1.88e-63 193
MS.gene98019.t1 AT4G20380 61.622 185 58 4 1 173 1 184 1.88e-63 193
MS.gene98019.t1 AT4G20380 61.622 185 58 4 1 173 1 184 1.88e-63 193
MS.gene98019.t1 AT4G20380 61.622 185 58 4 1 173 1 184 1.88e-63 193
MS.gene98019.t1 AT4G20380 54.028 211 58 4 1 173 1 210 4.94e-60 186
MS.gene98019.t1 AT1G32540 60.177 113 42 2 2 114 65 174 1.17e-45 148
MS.gene98019.t1 AT1G32540 58.772 114 44 1 2 115 32 142 4.36e-45 146
MS.gene98019.t1 AT1G32540 58.772 114 44 1 2 115 32 142 4.36e-45 146
MS.gene98019.t1 AT1G32540 59.459 111 42 1 2 112 32 139 2.21e-44 144
MS.gene98019.t1 AT4G20380 58.400 125 42 3 1 116 1 124 5.11e-42 137
MS.gene98019.t1 AT1G32540 61.039 77 27 2 2 78 65 138 1.07e-27 101
MS.gene98019.t1 AT1G32540 51.515 66 31 1 45 109 66 131 3.90e-14 66.2
MS.gene98019.t1 AT1G32540 59.740 77 28 1 2 78 32 105 3.52e-27 99.0
MS.gene98019.t1 AT1G32540 50.000 68 33 1 45 111 33 100 2.30e-14 66.2
MS.gene98019.t1 AT1G32540 59.740 77 28 1 2 78 32 105 3.52e-27 99.0
MS.gene98019.t1 AT1G32540 50.000 68 33 1 45 111 33 100 2.30e-14 66.2
MS.gene98019.t1 AT4G21610 47.500 80 42 0 43 122 57 136 2.51e-24 93.2
MS.gene98019.t1 AT4G21610 33.750 80 49 1 2 81 58 133 8.84e-11 57.8
MS.gene98019.t1 AT4G21610 45.946 74 40 0 43 116 57 130 1.01e-20 83.6

Find 44 sgRNAs with CRISPR-Local

Find 405 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGTTGATTCAAGTGGGAAAT+TGG 0.251370 2.3:-43250759 MS.gene98019:intron
TCGGAGCTGGTTGTTTCATT+AGG 0.307392 2.3:+43250961 None:intergenic
GGAGGAAGAACAGGAATAAC+AGG 0.354231 2.3:+43255537 None:intergenic
GGCAGTTCCCACAACGGATA+TGG 0.376956 2.3:+43251902 None:intergenic
GTTATTCCTGTTCTTCCTCC+TGG 0.387766 2.3:-43255534 MS.gene98019:intron
CGGAGCCACATTATGTGTAC+TGG 0.429482 2.3:-43255630 MS.gene98019:CDS
AAGATACCAGGAGGAAGAAC+AGG 0.433787 2.3:+43255528 None:intergenic
AGAAGATACCGTTTCGGAGC+TGG 0.444161 2.3:+43250948 None:intergenic
CAAACATTGCTTGCTCCTCT+AGG 0.449369 2.3:+43255585 None:intergenic
CCACTTGAATCAACGGACAT+AGG 0.456065 2.3:+43250767 None:intergenic
AGGAGTTGGCGGCCTTCCAT+TGG 0.478744 2.3:+43250993 None:intergenic
CAGGTAAGCAATGTTGTTGT+CGG 0.494446 2.3:-43250246 MS.gene98019:CDS
ATATCCGTTGTGGGAACTGC+CGG 0.504182 2.3:-43251900 MS.gene98019:CDS
TGCAGTAGAAGATACCGTTT+CGG 0.505298 2.3:+43250942 None:intergenic
AAATGAACCATATCCGTTGT+GGG 0.521367 2.3:-43251909 MS.gene98019:CDS
GTTTCATTAGGTGTCAGTAC+AGG 0.522934 2.3:+43250973 None:intergenic
CAATTTCCCACTTGAATCAA+CGG 0.526156 2.3:+43250760 None:intergenic
GAGGATACATGAGTGTTGTC+CGG 0.538194 2.3:+43251881 None:intergenic
AAACATTGCTTGCTCCTCTA+GGG 0.540478 2.3:+43255586 None:intergenic
GAAATGTCACAACTTTATTG+TGG 0.542581 2.3:-43254439 MS.gene98019:CDS
CAAATGAACCATATCCGTTG+TGG 0.547355 2.3:-43251910 MS.gene98019:CDS
TGAAACAACCAGCTCCGAAA+CGG 0.550490 2.3:-43250956 MS.gene98019:intron
AAGATTTATAGTGTTACAGC+AGG 0.559794 2.3:+43254363 None:intergenic
AACACTATAAATCTTGTGCC+AGG 0.563885 2.3:-43254355 MS.gene98019:intron
TTAGGTGTCAGTACAGGAGT+TGG 0.564205 2.3:+43250979 None:intergenic
GGTGTCAGTACAGGAGTTGG+CGG 0.576256 2.3:+43250982 None:intergenic
ACAACACTCATGTATCCTCA+TGG 0.578970 2.3:-43251877 MS.gene98019:CDS
ATGTCACAACTTTATTGTGG+AGG 0.583864 2.3:-43254436 MS.gene98019:CDS
ACATTATGTGTACTGGGTGT+AGG 0.596546 2.3:-43255623 MS.gene98019:CDS
TCCTGTAGATGACCAATGGA+AGG 0.615310 2.3:-43251005 MS.gene98019:intron
CCTATGTCCGTTGATTCAAG+TGG 0.615696 2.3:-43250767 MS.gene98019:CDS
CTATGTCCGTTGATTCAAGT+GGG 0.636368 2.3:-43250766 MS.gene98019:CDS
CAAACTGCACATTTGACTGA+AGG 0.636685 2.3:+43251850 None:intergenic
TACACCCAGTACACATAATG+TGG 0.639256 2.3:+43255625 None:intergenic
ATTGTCCTGTAGATGACCAA+TGG 0.647818 2.3:-43251009 MS.gene98019:intron
ACAGTTTGGCTCTCAAAGCG+AGG 0.654435 2.3:+43250803 None:intergenic
GGAGCCACATTATGTGTACT+GGG 0.663903 2.3:-43255629 MS.gene98019:CDS
GAGGAAGAACAGGAATAACA+GGG 0.675525 2.3:+43255538 None:intergenic
AACATCTTGCTATACCCTAG+AGG 0.676113 2.3:-43255600 MS.gene98019:CDS
ACATTGCTAATGCACGCACG+TGG 0.683036 2.3:-43254406 MS.gene98019:CDS
TTGTCCGGCAGTTCCCACAA+CGG 0.690082 2.3:+43251896 None:intergenic
GTTACAGCAGGAACATCTCA+CGG 0.690666 2.3:+43254375 None:intergenic
TTGACTGAAGGAGCTCCATG+AGG 0.723404 2.3:+43251862 None:intergenic
AGGAAGAACAGGAATAACAG+GGG 0.773701 2.3:+43255539 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TCATAAAATCAATTAAATTT+GGG - chr2.3:43250630-43250649 MS.gene98019:intron 10.0%
!!! AAAACTATAAAATATTTTAC+AGG - chr2.3:43255467-43255486 MS.gene98019:intron 10.0%
!!! AAATTTAATTGATTTTATGA+GGG + chr2.3:43250630-43250649 None:intergenic 10.0%
!!! TTTTATTTTTTTGTTAGTTT+TGG - chr2.3:43255134-43255153 MS.gene98019:intron 10.0%
!! AAAAAAAAAAAATCAAAGGA+AGG + chr2.3:43250462-43250481 None:intergenic 15.0%
!! AACGATAATAAAAATCAATA+TGG + chr2.3:43251199-43251218 None:intergenic 15.0%
!! AAGGAAAGAATTATAAATTA+AGG + chr2.3:43251665-43251684 None:intergenic 15.0%
!! AATTCCTAAAAAAATAAACA+GGG + chr2.3:43253404-43253423 None:intergenic 15.0%
!! ACGATAATAAAAATCAATAT+GGG + chr2.3:43251198-43251217 None:intergenic 15.0%
!! AGGAAAGAATTATAAATTAA+GGG + chr2.3:43251664-43251683 None:intergenic 15.0%
!! CTCATAAAATCAATTAAATT+TGG - chr2.3:43250629-43250648 MS.gene98019:intron 15.0%
!! GATTTAAACTATAATCTAAA+TGG - chr2.3:43251351-43251370 MS.gene98019:intron 15.0%
!! TTAGGAAAAAAAAAAATCAT+AGG + chr2.3:43253554-43253573 None:intergenic 15.0%
!! TTATAAATATATATCATACC+TGG + chr2.3:43251523-43251542 None:intergenic 15.0%
!! TTATGAGTATAGAAATTATT+AGG + chr2.3:43255355-43255374 None:intergenic 15.0%
!!! AAACATATTAAACTTTTAGA+CGG + chr2.3:43251985-43252004 None:intergenic 15.0%
!!! AAGAAAAAAAAAGTTTTTTG+GGG - chr2.3:43253040-43253059 MS.gene98019:intron 15.0%
!!! AATTTAATTGATTTTATGAG+GGG + chr2.3:43250629-43250648 None:intergenic 15.0%
!!! AGAAGAAAAAAAAAGTTTTT+TGG - chr2.3:43253038-43253057 MS.gene98019:intron 15.0%
!!! CAAATTTAATTGATTTTATG+AGG + chr2.3:43250631-43250650 None:intergenic 15.0%
!!! CATTACTTCAAATATATTTT+AGG - chr2.3:43254666-43254685 MS.gene98019:intron 15.0%
!!! GAAGAAAAAAAAAGTTTTTT+GGG - chr2.3:43253039-43253058 MS.gene98019:intron 15.0%
!!! TATTGAGTTAATTTTTCTAT+TGG + chr2.3:43250763-43250782 None:intergenic 15.0%
!!! TTTAAAACTAATCTGAATTT+CGG + chr2.3:43253661-43253680 None:intergenic 15.0%
!! AAAATTTACGTGTAAACTTT+AGG - chr2.3:43253777-43253796 MS.gene98019:intron 20.0%
!! AAACTATTAAAACCTACTAA+AGG - chr2.3:43253248-43253267 MS.gene98019:intron 20.0%
!! AAATCATATACTCAATTTAG+TGG - chr2.3:43250573-43250592 MS.gene98019:intron 20.0%
!! AACTATTAAAACCTACTAAA+GGG - chr2.3:43253249-43253268 MS.gene98019:intron 20.0%
!! AATCATATACTCAATTTAGT+GGG - chr2.3:43250574-43250593 MS.gene98019:intron 20.0%
!! ACAAAAATTATCGAGTTAAA+TGG + chr2.3:43252509-43252528 None:intergenic 20.0%
!! ATATTTAAGAAAAGAAAGAC+AGG - chr2.3:43254386-43254405 MS.gene98019:CDS 20.0%
!! CAAAATTCACTTATTCTATA+GGG + chr2.3:43255190-43255209 None:intergenic 20.0%
!! CAATTCCTAAAAAAATAAAC+AGG + chr2.3:43253405-43253424 None:intergenic 20.0%
!! CATTTGATTAGAATCTTTAA+AGG + chr2.3:43253933-43253952 None:intergenic 20.0%
!! CGATAATAAAAATCAATATG+GGG + chr2.3:43251197-43251216 None:intergenic 20.0%
!! CTAAATTGAGTATATGATTT+CGG + chr2.3:43250573-43250592 None:intergenic 20.0%
!! GATATAATTGACTATAGATA+TGG + chr2.3:43251228-43251247 None:intergenic 20.0%
!! GTCTAAAAGTTTAATATGTT+TGG - chr2.3:43251984-43252003 MS.gene98019:intron 20.0%
!! GTTGAAAATCAGAAAATAAT+TGG - chr2.3:43254282-43254301 MS.gene98019:intron 20.0%
!! TATAAAAGCTTGATATAGAT+GGG - chr2.3:43254583-43254602 MS.gene98019:intron 20.0%
!! TATCAAAATAGAATCTTGAT+TGG + chr2.3:43254175-43254194 None:intergenic 20.0%
!! TTAAAACTAATCTGAATTTC+GGG + chr2.3:43253660-43253679 None:intergenic 20.0%
!! TTAACTACAAAAATATTGCA+TGG + chr2.3:43252221-43252240 None:intergenic 20.0%
!! TTTATTCACTAAACAAGAAA+TGG + chr2.3:43253174-43253193 None:intergenic 20.0%
!!! AAATCAAAGTTTCTTTTTTC+AGG + chr2.3:43255223-43255242 None:intergenic 20.0%
!!! AATCAAAGTTTCTTTTTTCA+GGG + chr2.3:43255222-43255241 None:intergenic 20.0%
!!! ATACTAGTTTTGTACATAAT+TGG - chr2.3:43250783-43250802 MS.gene98019:CDS 20.0%
!!! ATTTAATTGATTTTATGAGG+GGG + chr2.3:43250628-43250647 None:intergenic 20.0%
!!! TAATTTGAGATGACTATTTT+TGG - chr2.3:43255254-43255273 MS.gene98019:intron 20.0%
!!! TAGTAGGTTTTAATAGTTTA+GGG + chr2.3:43253247-43253266 None:intergenic 20.0%
!!! TATTTTTTTAGGAATTGAAG+TGG - chr2.3:43253408-43253427 MS.gene98019:intron 20.0%
!!! TCAAATATATTTTAGGATTC+TGG - chr2.3:43254673-43254692 MS.gene98019:intron 20.0%
!!! TCAGTTTTATTCATAAGAAT+GGG - chr2.3:43251924-43251943 MS.gene98019:intron 20.0%
!!! TTAATTTTAAGAATGTGAAC+TGG - chr2.3:43255586-43255605 MS.gene98019:CDS 20.0%
!!! TTAGTAGGTTTTAATAGTTT+AGG + chr2.3:43253248-43253267 None:intergenic 20.0%
!!! TTCAGTTTTATTCATAAGAA+TGG - chr2.3:43251923-43251942 MS.gene98019:intron 20.0%
!!! TTGATAACAAAAACAGTAAA+AGG + chr2.3:43250356-43250375 None:intergenic 20.0%
! AAAACCTTTGGTCTAAAAAT+GGG + chr2.3:43253375-43253394 None:intergenic 25.0%
! AAATACACTTAATTCATCGA+TGG - chr2.3:43251619-43251638 MS.gene98019:intron 25.0%
! AATATCTTCTGATTATTCCA+TGG - chr2.3:43252065-43252084 MS.gene98019:intron 25.0%
! AATTAAAATTATGCTGTCCA+TGG + chr2.3:43252085-43252104 None:intergenic 25.0%
! ATAGTCATCTCAAATTATGA+AGG + chr2.3:43255251-43255270 None:intergenic 25.0%
! ATATCCATAGATGAAGAAAA+TGG + chr2.3:43253838-43253857 None:intergenic 25.0%
! ATTGGCTAAATAGAGAAAAA+TGG + chr2.3:43251251-43251270 None:intergenic 25.0%
! ATTTAGCCAATTATCAACAA+GGG - chr2.3:43251260-43251279 MS.gene98019:intron 25.0%
! CCAAAATTCACTTATTCTAT+AGG + chr2.3:43255191-43255210 None:intergenic 25.0%
! CTATAAAAGCTTGATATAGA+TGG - chr2.3:43254582-43254601 MS.gene98019:intron 25.0%
! GAAAAAAAAAAATCATAGGC+AGG + chr2.3:43253550-43253569 None:intergenic 25.0%
! GAATGATATTATGATAGATC+TGG - chr2.3:43252838-43252857 MS.gene98019:intron 25.0%
! GTAAATTAATTCTGTTGATC+TGG - chr2.3:43254117-43254136 MS.gene98019:intron 25.0%
! TAAAATTATCTTTCCCAACA+TGG - chr2.3:43252172-43252191 MS.gene98019:intron 25.0%
! TATTTAGCCAATTATCAACA+AGG - chr2.3:43251259-43251278 MS.gene98019:intron 25.0%
! TCAGAAGATATTACGTTAAA+TGG + chr2.3:43252057-43252076 None:intergenic 25.0%
! TTAAATTGAAAACTCCTTCT+TGG - chr2.3:43251031-43251050 MS.gene98019:intron 25.0%
! TTAACGAGAATTATATGTCA+TGG + chr2.3:43253339-43253358 None:intergenic 25.0%
! TTCCAAATACTTCAATAGTT+AGG + chr2.3:43253479-43253498 None:intergenic 25.0%
! TTGGCTAAATAGAGAAAAAT+GGG + chr2.3:43251250-43251269 None:intergenic 25.0%
!! CAAATCTGAAATTACTGATT+TGG + chr2.3:43255440-43255459 None:intergenic 25.0%
!! CCTATAGAATAAGTGAATTT+TGG - chr2.3:43255188-43255207 MS.gene98019:intron 25.0%
!! GCTAAACAGTACAATATTTT+TGG + chr2.3:43251816-43251835 None:intergenic 25.0%
!! GGGAAGAAATAATTCATTTT+AGG + chr2.3:43255399-43255418 None:intergenic 25.0%
!! TCAACATTTTGCATTTTATG+TGG - chr2.3:43254789-43254808 MS.gene98019:intron 25.0%
!! TTAACTCGATAATTTTTGTC+CGG - chr2.3:43252510-43252529 MS.gene98019:intron 25.0%
!! TTATAAATTAAGGGTATACC+AGG + chr2.3:43251655-43251674 None:intergenic 25.0%
!! TTCCTAACTATTGAAGTATT+TGG - chr2.3:43253474-43253493 MS.gene98019:intron 25.0%
!!! ATCAAAGTTTCTTTTTTCAG+GGG + chr2.3:43255221-43255240 None:intergenic 25.0%
!!! CAAACCCTGTTTATTTTTTT+AGG - chr2.3:43253397-43253416 MS.gene98019:intron 25.0%
!!! GTACAATATTTTTGGAAAGT+AGG + chr2.3:43251808-43251827 None:intergenic 25.0%
!!! TCAGATTATGTCATTTTGTT+CGG - chr2.3:43254305-43254324 MS.gene98019:intron 25.0%
AAAACTTACAACTTAATCGC+AGG + chr2.3:43250706-43250725 None:intergenic 30.0%
AAACCTTTGGTCTAAAAATG+GGG + chr2.3:43253374-43253393 None:intergenic 30.0%
AAACTCCTTCTTGGAATAAT+TGG - chr2.3:43251040-43251059 MS.gene98019:intron 30.0%
AAACTTACAACTTAATCGCA+GGG + chr2.3:43250705-43250724 None:intergenic 30.0%
AAATAAAATCAGTGAACCAG+TGG + chr2.3:43255541-43255560 None:intergenic 30.0%
AACAACTTAGCATGTATGAT+TGG + chr2.3:43253888-43253907 None:intergenic 30.0%
AACGATAATACGACAACAAT+TGG + chr2.3:43253306-43253325 None:intergenic 30.0%
AAGATTTATAGTGTTACAGC+AGG + chr2.3:43251497-43251516 None:intergenic 30.0%
AATATTGTACTGTTTAGCGA+AGG - chr2.3:43251818-43251837 MS.gene98019:intron 30.0%
ACAAAAACAAGAGAGAATCT+TGG - chr2.3:43253614-43253633 MS.gene98019:intron 30.0%
ACGATAATACGACAACAATT+GGG + chr2.3:43253305-43253324 None:intergenic 30.0%
ACTGATATCAAGTAAATTGC+AGG + chr2.3:43254767-43254786 None:intergenic 30.0%
ACTGATTGGATTTGAAGAAT+AGG - chr2.3:43254217-43254236 MS.gene98019:intron 30.0%
AGATAATGAATTACTGCAAG+TGG + chr2.3:43253587-43253606 None:intergenic 30.0%
AGGATATGGTAACTATACAA+TGG + chr2.3:43255511-43255530 None:intergenic 30.0%
ATATGTCATGTCATCTCTAA+TGG - chr2.3:43255327-43255346 MS.gene98019:intron 30.0%
ATCCACATAGCTCAATAATT+AGG - chr2.3:43253740-43253759 MS.gene98019:intron 30.0%
ATTGTTGTCGTATTATCGTT+TGG - chr2.3:43253306-43253325 MS.gene98019:intron 30.0%
CAAAACCTTTGGTCTAAAAA+TGG + chr2.3:43253376-43253395 None:intergenic 30.0%
CGAATACACTATTTCGTATT+TGG + chr2.3:43254531-43254550 None:intergenic 30.0%
GAAATGTCACAACTTTATTG+TGG - chr2.3:43251418-43251437 MS.gene98019:intron 30.0%
GAGTATGATGTACATATAGT+TGG + chr2.3:43251755-43251774 None:intergenic 30.0%
TAATAGTTTAGGGACCAATT+TGG + chr2.3:43253237-43253256 None:intergenic 30.0%
TATGACAAAAGTTACTCCTT+TGG + chr2.3:43250923-43250942 None:intergenic 30.0%
TCAATAGTTAGGAACAAGAA+TGG + chr2.3:43253468-43253487 None:intergenic 30.0%
TCATATCATCAACTTACCAA+AGG - chr2.3:43250904-43250923 MS.gene98019:intron 30.0%
TCCACATAGCTCAATAATTA+GGG - chr2.3:43253741-43253760 MS.gene98019:intron 30.0%
TTACAACAGAGAAGAAATGA+TGG - chr2.3:43255636-43255655 MS.gene98019:CDS 30.0%
TTCCTTACTATAAATCACGA+AGG - chr2.3:43252109-43252128 MS.gene98019:intron 30.0%
TTGTGAATTGAAACAGATCA+AGG + chr2.3:43252919-43252938 None:intergenic 30.0%
TTGTTGTCGTATTATCGTTT+GGG - chr2.3:43253307-43253326 MS.gene98019:intron 30.0%
! ACGAAATAGTGTATTCGTTT+TGG - chr2.3:43254534-43254553 MS.gene98019:intron 30.0%
! AGTTCCATTTTCTTCATCTA+TGG - chr2.3:43253831-43253850 MS.gene98019:intron 30.0%
! ATACCTTGAAGTTTCACTTT+TGG - chr2.3:43252580-43252599 MS.gene98019:intron 30.0%
! ATTGAAGTATTTGGAACAGT+TGG - chr2.3:43253483-43253502 MS.gene98019:intron 30.0%
! GAACAAGTGAACTTTTAAAC+TGG + chr2.3:43251328-43251347 None:intergenic 30.0%
! GAATTATTTCTTCCCTCAAA+TGG - chr2.3:43255404-43255423 MS.gene98019:intron 30.0%
! GATTTTCTACTACTACAGTT+TGG + chr2.3:43255071-43255090 None:intergenic 30.0%
! GCTAAAGATTTTAGACTGAT+TGG - chr2.3:43254203-43254222 MS.gene98019:intron 30.0%
! GTTGTAAGTTTTTGCAGTAA+TGG - chr2.3:43250714-43250733 MS.gene98019:intron 30.0%
! TAACTTGTCTGATCCAAATT+AGG - chr2.3:43251145-43251164 MS.gene98019:intron 30.0%
! TATAGTTGAGACATAGGTTT+TGG - chr2.3:43252139-43252158 MS.gene98019:intron 30.0%
!! CATTTTTAGACCAAAGGTTT+TGG - chr2.3:43253374-43253393 MS.gene98019:intron 30.0%
!! GTTGTTTACTGACTTATTGT+TGG - chr2.3:43253902-43253921 MS.gene98019:intron 30.0%
!! TACCTTGAAGTTTCACTTTT+GGG - chr2.3:43252581-43252600 MS.gene98019:intron 30.0%
!!! AATGCTACACTAGTTTTCAT+CGG + chr2.3:43250856-43250875 None:intergenic 30.0%
!!! CAGATTATGTCATTTTGTTC+GGG - chr2.3:43254306-43254325 MS.gene98019:intron 30.0%
!!! GAATAAGTGAATTTTGGTTC+TGG - chr2.3:43255194-43255213 MS.gene98019:intron 30.0%
AAATGAACCATATCCGTTGT+GGG - chr2.3:43253948-43253967 MS.gene98019:intron 35.0%
AACACTATAAATCTTGTGCC+AGG - chr2.3:43251502-43251521 MS.gene98019:intron 35.0%
AACCCAAAAGTGAAACTTCA+AGG + chr2.3:43252586-43252605 None:intergenic 35.0%
AACCTTTGGTCTAAAAATGG+GGG + chr2.3:43253373-43253392 None:intergenic 35.0%
AAGACTCAATCAACACAGTA+TGG + chr2.3:43252647-43252666 None:intergenic 35.0%
AAGAGAGAATCTTGGTCATT+TGG - chr2.3:43253622-43253641 MS.gene98019:intron 35.0%
AATCTAAATGGTTACGTCCA+GGG - chr2.3:43251363-43251382 MS.gene98019:intron 35.0%
ACACAGTATGGGTGAAAATA+AGG + chr2.3:43252635-43252654 None:intergenic 35.0%
ACAGTAAAAGGAAAGATACC+AGG + chr2.3:43250344-43250363 None:intergenic 35.0%
ACCCTAATTATTGAGCTATG+TGG + chr2.3:43253745-43253764 None:intergenic 35.0%
ACTCGGGGATACAAAAAATT+AGG + chr2.3:43252674-43252693 None:intergenic 35.0%
AGACTCAATCAACACAGTAT+GGG + chr2.3:43252646-43252665 None:intergenic 35.0%
AGTTAAGGAATGTCACATGT+CGG + chr2.3:43255286-43255305 None:intergenic 35.0%
ATCCATCCTAATACCATGTT+GGG + chr2.3:43252188-43252207 None:intergenic 35.0%
ATCTGGTATCAAGACAGTAA+AGG - chr2.3:43252855-43252874 MS.gene98019:intron 35.0%
ATCTTTCAACATAGTGCAGA+TGG + chr2.3:43254368-43254387 None:intergenic 35.0%
ATCTTTCCCAACATGGTATT+AGG - chr2.3:43252179-43252198 MS.gene98019:intron 35.0%
ATGTCACAACTTTATTGTGG+AGG - chr2.3:43251421-43251440 MS.gene98019:intron 35.0%
ATTGCATACTTAGACTAAGC+AGG - chr2.3:43250424-43250443 MS.gene98019:intron 35.0%
CAACAAAGAGTTGTAAAGTG+AGG + chr2.3:43250950-43250969 None:intergenic 35.0%
CAATTTCCCACTTGAATCAA+CGG + chr2.3:43255100-43255119 None:intergenic 35.0%
CACAGTATGGGTGAAAATAA+GGG + chr2.3:43252634-43252653 None:intergenic 35.0%
CACCTTCGTGATTTATAGTA+AGG + chr2.3:43252114-43252133 None:intergenic 35.0%
CACTAAACAAGAAATGGAGA+GGG + chr2.3:43253168-43253187 None:intergenic 35.0%
CATAAGAATGGGATCGAAAA+GGG - chr2.3:43251935-43251954 MS.gene98019:intron 35.0%
CTCATAACGTAACTTTAGCA+CGG - chr2.3:43255368-43255387 MS.gene98019:intron 35.0%
GAAAAGAAAGACAGGATCAT+AGG - chr2.3:43254394-43254413 MS.gene98019:CDS 35.0%
GAACTATAAAAATCCTGCCA+AGG - chr2.3:43254420-43254439 MS.gene98019:CDS 35.0%
GTGTAAAAGCTGTACAAATC+TGG + chr2.3:43251556-43251575 None:intergenic 35.0%
TAAAAAGAGAGGGTTGTGTT+AGG - chr2.3:43254460-43254479 MS.gene98019:intron 35.0%
TAATCTAAATGGTTACGTCC+AGG - chr2.3:43251362-43251381 MS.gene98019:intron 35.0%
TATCAGTAGTGATTAGACAC+AGG + chr2.3:43255310-43255329 None:intergenic 35.0%
TATCCATCCTAATACCATGT+TGG + chr2.3:43252189-43252208 None:intergenic 35.0%
TCACTAAACAAGAAATGGAG+AGG + chr2.3:43253169-43253188 None:intergenic 35.0%
TCATAAGAATGGGATCGAAA+AGG - chr2.3:43251934-43251953 MS.gene98019:intron 35.0%
TCGATGTAAGTGTACATTGA+TGG - chr2.3:43254047-43254066 MS.gene98019:intron 35.0%
TGATCCAAATTAGGATCTAG+AGG - chr2.3:43251154-43251173 MS.gene98019:intron 35.0%
TGGATCCAATTATTCCAAGA+AGG + chr2.3:43251048-43251067 None:intergenic 35.0%
TGTCGAAACAATGATGATTG+TGG + chr2.3:43252944-43252963 None:intergenic 35.0%
TTAGGATTCTGGTACTTGTA+TGG - chr2.3:43254684-43254703 MS.gene98019:intron 35.0%
TTGCATACTTAGACTAAGCA+GGG - chr2.3:43250425-43250444 MS.gene98019:intron 35.0%
TTGGAACATGGAATATAGGT+AGG - chr2.3:43254553-43254572 MS.gene98019:intron 35.0%
TTGGATGGAGGAATAGTTTA+CGG + chr2.3:43253276-43253295 None:intergenic 35.0%
! ATCAGGAAATTTTAGATCCC+TGG + chr2.3:43251383-43251402 None:intergenic 35.0%
! ATTAAGGGTATACCAGGATT+TGG + chr2.3:43251649-43251668 None:intergenic 35.0%
! CACCAAAAAGCATATGAAGA+TGG + chr2.3:43250882-43250901 None:intergenic 35.0%
! GAAACTTCAAGGTATCAAAG+TGG + chr2.3:43252575-43252594 None:intergenic 35.0%
! GATTCGACAAAGTTTTACGT+TGG + chr2.3:43254495-43254514 None:intergenic 35.0%
! GCAAGTGGATGATATTGATT+AGG + chr2.3:43253572-43253591 None:intergenic 35.0%
! GGTTTTTGTAGACACAATGA+TGG - chr2.3:43252602-43252621 MS.gene98019:intron 35.0%
! TGATATCTTTTACCCTTTCC+TGG - chr2.3:43254825-43254844 MS.gene98019:intron 35.0%
!! ATGCATCCCTTGTTGATAAT+TGG + chr2.3:43251269-43251288 None:intergenic 35.0%
!! ATTTTTGGAAAGTAGGTCAC+TGG + chr2.3:43251801-43251820 None:intergenic 35.0%
!! CGTGTAAACTTTAGGATGTT+TGG - chr2.3:43253785-43253804 MS.gene98019:intron 35.0%
!! TGTTCGGGCTTTAATTTGTT+GGG - chr2.3:43254321-43254340 MS.gene98019:intron 35.0%
!! TTGTTCGGGCTTTAATTTGT+TGG - chr2.3:43254320-43254339 MS.gene98019:intron 35.0%
!!! AGTGTATTCGTTTTGGAACA+TGG - chr2.3:43254541-43254560 MS.gene98019:intron 35.0%
!!! ATGCTACACTAGTTTTCATC+GGG + chr2.3:43250855-43250874 None:intergenic 35.0%
!!! ATTTTTGTCCGGCCTTATTT+AGG - chr2.3:43252521-43252540 MS.gene98019:intron 35.0%
!!! CGTTTTGGAACATGGAATAT+AGG - chr2.3:43254549-43254568 MS.gene98019:intron 35.0%
!!! GCTGTTGACTTTCTTTCTTT+TGG - chr2.3:43254945-43254964 MS.gene98019:intron 35.0%
AAACATTGCTTGCTCCTCTA+GGG + chr2.3:43250274-43250293 None:intergenic 40.0%
ACAACACTCATGTATCCTCA+TGG - chr2.3:43253980-43253999 MS.gene98019:intron 40.0%
ACAATTGGGCAATAGTTGGA+TGG + chr2.3:43253291-43253310 None:intergenic 40.0%
ACATTATGTGTACTGGGTGT+AGG - chr2.3:43250234-43250253 MS.gene98019:CDS 40.0%
AGGAAGAACAGGAATAACAG+GGG + chr2.3:43250321-43250340 None:intergenic 40.0%
ATAGCTTGAAATACACCGCA+AGG + chr2.3:43251702-43251721 None:intergenic 40.0%
ATCGATGGTATACCAAATCC+TGG - chr2.3:43251634-43251653 MS.gene98019:intron 40.0%
ATTAAGGATGACAGTGAGGT+AGG + chr2.3:43252378-43252397 None:intergenic 40.0%
ATTGTCCTGTAGATGACCAA+TGG - chr2.3:43254848-43254867 MS.gene98019:intron 40.0%
CAAACTGCACATTTGACTGA+AGG + chr2.3:43254010-43254029 None:intergenic 40.0%
CAAATGAACCATATCCGTTG+TGG - chr2.3:43253947-43253966 MS.gene98019:intron 40.0%
CAAGGGGAAAAAAGAAAGGA+AGG + chr2.3:43251684-43251703 None:intergenic 40.0%
CAAGTAAATTGCAGGCATAG+AGG + chr2.3:43254759-43254778 None:intergenic 40.0%
CAATGCAGAGGAAAGAGAAA+AGG + chr2.3:43252308-43252327 None:intergenic 40.0%
CAGGTAAGCAATGTTGTTGT+CGG - chr2.3:43255611-43255630 MS.gene98019:CDS 40.0%
CCAAATTAGGATCTAGAGGT+TGG - chr2.3:43251158-43251177 MS.gene98019:intron 40.0%
CCAACCTCTAGATCCTAATT+TGG + chr2.3:43251161-43251180 None:intergenic 40.0%
CCTTTGTGCAAAAACCCTTT+GGG - chr2.3:43251874-43251893 MS.gene98019:CDS 40.0%
CGCGTTTATGTATTGTAGGT+AGG - chr2.3:43251086-43251105 MS.gene98019:intron 40.0%
CGTACACAATCAAATAGACG+AGG + chr2.3:43252819-43252838 None:intergenic 40.0%
CTCTTCAAGCATGGTTTCAT+AGG - chr2.3:43252715-43252734 MS.gene98019:intron 40.0%
GAATTGAAGTGGCACAAAGA+TGG - chr2.3:43253419-43253438 MS.gene98019:intron 40.0%
GACAACAATTGGGCAATAGT+TGG + chr2.3:43253295-43253314 None:intergenic 40.0%
GAGGAAGAACAGGAATAACA+GGG + chr2.3:43250322-43250341 None:intergenic 40.0%
GGATATTAAGGATGACAGTG+AGG + chr2.3:43252382-43252401 None:intergenic 40.0%
GTAAAAGGAAAGATACCAGG+AGG + chr2.3:43250341-43250360 None:intergenic 40.0%
GTCCACATTTCAAACCCAAA+GGG + chr2.3:43251891-43251910 None:intergenic 40.0%
GTGTGGTATAGTTGAGACAT+AGG - chr2.3:43252133-43252152 MS.gene98019:intron 40.0%
GTTTCATTAGGTGTCAGTAC+AGG + chr2.3:43254887-43254906 None:intergenic 40.0%
TACACCCAGTACACATAATG+TGG + chr2.3:43250235-43250254 None:intergenic 40.0%
TACACTGAGCACAGTAGATA+GGG + chr2.3:43252272-43252291 None:intergenic 40.0%
TAGCTTGAAATACACCGCAA+GGG + chr2.3:43251701-43251720 None:intergenic 40.0%
TAGTTTACGGACCCTTTAGT+AGG + chr2.3:43253263-43253282 None:intergenic 40.0%
TATAAAAATCCTGCCAAGGC+CGG - chr2.3:43254424-43254443 MS.gene98019:CDS 40.0%
TGATTAGACACAGGCAGTTA+AGG + chr2.3:43255301-43255320 None:intergenic 40.0%
TGCACGCGTTTATGTATTGT+AGG - chr2.3:43251082-43251101 MS.gene98019:intron 40.0%
TGCAGTAGAAGATACCGTTT+CGG + chr2.3:43254918-43254937 None:intergenic 40.0%
TGGACACGCTAAGGATATTA+AGG + chr2.3:43252394-43252413 None:intergenic 40.0%
TGTCCACATTTCAAACCCAA+AGG + chr2.3:43251892-43251911 None:intergenic 40.0%
TTAACTCAACACACTGAGCA+TGG + chr2.3:43250400-43250419 None:intergenic 40.0%
TTAAGAATGTGAACTGGCAC+AGG - chr2.3:43255592-43255611 MS.gene98019:CDS 40.0%
TTCCCAACATGGTATTAGGA+TGG - chr2.3:43252183-43252202 MS.gene98019:intron 40.0%
TTGCTGAGCATTATCTTCAC+TGG - chr2.3:43252352-43252371 MS.gene98019:intron 40.0%
! AACATCTTGCTATACCCTAG+AGG - chr2.3:43250257-43250276 MS.gene98019:intron 40.0%
! AACCCTTTGGGTTTGAAATG+TGG - chr2.3:43251886-43251905 MS.gene98019:CDS 40.0%
! AGAGAGAGACTGCTAGTTTA+GGG + chr2.3:43253210-43253229 None:intergenic 40.0%
! ATTTGTCTGAGATGTGTCCA+AGG - chr2.3:43252987-43253006 MS.gene98019:intron 40.0%
! CAAGGTATCAAAGTGGCTTT+GGG + chr2.3:43252568-43252587 None:intergenic 40.0%
! CCAAAGGGTTTTTGCACAAA+GGG + chr2.3:43251876-43251895 None:intergenic 40.0%
! CGCCATCTTCATATGCTTTT+TGG - chr2.3:43250877-43250896 MS.gene98019:intron 40.0%
! CTATAAATCACGAAGGTGTG+TGG - chr2.3:43252116-43252135 MS.gene98019:intron 40.0%
! CTTTTCTCTTTCCTCTGCAT+TGG - chr2.3:43252306-43252325 MS.gene98019:intron 40.0%
! GTTTGAAATGTGGACATGGT+GGG - chr2.3:43251896-43251915 MS.gene98019:CDS 40.0%
! TCAAGGTATCAAAGTGGCTT+TGG + chr2.3:43252569-43252588 None:intergenic 40.0%
! TTGGGTTTGAAATGTGGACA+TGG - chr2.3:43251892-43251911 MS.gene98019:CDS 40.0%
! TTTGAAATGTGGACATGGTG+GGG - chr2.3:43251897-43251916 MS.gene98019:CDS 40.0%
!! AGACTGATTGGTGCCATATA+AGG + chr2.3:43252697-43252716 None:intergenic 40.0%
!! ATTGGTGCCATATAAGGACT+CGG + chr2.3:43252691-43252710 None:intergenic 40.0%
!! CGTTGATTCAAGTGGGAAAT+TGG - chr2.3:43255098-43255117 MS.gene98019:intron 40.0%
!! CTATGTCCGTTGATTCAAGT+GGG - chr2.3:43255091-43255110 MS.gene98019:intron 40.0%
!! TTCCCCCATTTTTAGACCAA+AGG - chr2.3:43253368-43253387 MS.gene98019:intron 40.0%
!! TTGCAGTAATGGATGTCACT+TGG - chr2.3:43250725-43250744 MS.gene98019:intron 40.0%
!!! ACTAGTTTTCATCGGGAATG+AGG + chr2.3:43250848-43250867 None:intergenic 40.0%
!!! TCCTTTCTTTTTTCCCCTTG+CGG - chr2.3:43251684-43251703 MS.gene98019:intron 40.0%
AAAACGTGAGTTTCGAACGC+AGG - chr2.3:43250508-43250527 MS.gene98019:intron 45.0%
AAAGAGAAAAGGCTACACCG+AGG + chr2.3:43252297-43252316 None:intergenic 45.0%
AAATTTCCTGATGTGCCTGC+AGG - chr2.3:43251391-43251410 MS.gene98019:intron 45.0%
AAGATACCAGGAGGAAGAAC+AGG + chr2.3:43250332-43250351 None:intergenic 45.0%
AAGGAATGTCACATGTCGGT+AGG + chr2.3:43255282-43255301 None:intergenic 45.0%
AAGGACACACACAATCTCAG+GGG - chr2.3:43253098-43253117 MS.gene98019:intron 45.0%
AAGTGCACCTGGTTTCTATC+TGG - chr2.3:43252465-43252484 MS.gene98019:intron 45.0%
ACAAGGACACACACAATCTC+AGG - chr2.3:43253096-43253115 MS.gene98019:intron 45.0%
ACAGGGTTTGCCAAAACCTT+TGG + chr2.3:43253387-43253406 None:intergenic 45.0%
ACCGCAAGGGGAAAAAAGAA+AGG + chr2.3:43251688-43251707 None:intergenic 45.0%
AGCTTGAAATACACCGCAAG+GGG + chr2.3:43251700-43251719 None:intergenic 45.0%
AGGAATGTCACATGTCGGTA+GGG + chr2.3:43255281-43255300 None:intergenic 45.0%
AGTGAACCAGTGGAAAATGC+AGG + chr2.3:43255531-43255550 None:intergenic 45.0%
ATACTTAGACTAAGCAGGGC+CGG - chr2.3:43250429-43250448 MS.gene98019:intron 45.0%
ATCAAAGGAAGGATCAACGC+CGG + chr2.3:43250451-43250470 None:intergenic 45.0%
ATTGGGCAATAGTTGGATGG+AGG + chr2.3:43253288-43253307 None:intergenic 45.0%
CAAACATTGCTTGCTCCTCT+AGG + chr2.3:43250275-43250294 None:intergenic 45.0%
CAAGGACACACACAATCTCA+GGG - chr2.3:43253097-43253116 MS.gene98019:intron 45.0%
CCAATCAGTCTCTTCAAGCA+TGG - chr2.3:43252706-43252725 MS.gene98019:intron 45.0%
CCACTTGAATCAACGGACAT+AGG + chr2.3:43255093-43255112 None:intergenic 45.0%
CCAGTGGAAAATGCAGGATA+TGG + chr2.3:43255525-43255544 None:intergenic 45.0%
CCATGCTTGAAGAGACTGAT+TGG + chr2.3:43252709-43252728 None:intergenic 45.0%
CCCTTTGTGCAAAAACCCTT+TGG - chr2.3:43251873-43251892 MS.gene98019:CDS 45.0%
CTACAGGACAATCCAGGAAA+GGG + chr2.3:43254840-43254859 None:intergenic 45.0%
CTGAGTTGTCGTACAAGTGT+CGG - chr2.3:43253071-43253090 MS.gene98019:intron 45.0%
CTTCCCTCAAATGGATGCTT+GGG - chr2.3:43255413-43255432 MS.gene98019:intron 45.0%
GAAAAGGGTTGCCTTTCGAT+CGG - chr2.3:43251950-43251969 MS.gene98019:intron 45.0%
GATAAGGGCCTAAATAAGGC+CGG + chr2.3:43252532-43252551 None:intergenic 45.0%
GCCAGATAAGGGCCTAAATA+AGG + chr2.3:43252536-43252555 None:intergenic 45.0%
GGAGCCACATTATGTGTACT+GGG - chr2.3:43250228-43250247 MS.gene98019:CDS 45.0%
GGAGGAAGAACAGGAATAAC+AGG + chr2.3:43250323-43250342 None:intergenic 45.0%
GGTTTCTATCTGGCTGTCAA+GGG - chr2.3:43252475-43252494 MS.gene98019:intron 45.0%
GTACACTGAGCACAGTAGAT+AGG + chr2.3:43252273-43252292 None:intergenic 45.0%
GTCTCTCTCTGTGTCCAAAT+TGG - chr2.3:43253220-43253239 MS.gene98019:intron 45.0%
GTGTAGCACTTAGCAGTAGA+AGG + chr2.3:43252787-43252806 None:intergenic 45.0%
GTTACAGCAGGAACATCTCA+CGG + chr2.3:43251485-43251504 None:intergenic 45.0%
GTTATTCCTGTTCTTCCTCC+TGG - chr2.3:43250323-43250342 MS.gene98019:intron 45.0%
TCCTGTAGATGACCAATGGA+AGG - chr2.3:43254852-43254871 MS.gene98019:intron 45.0%
TCTACAGGACAATCCAGGAA+AGG + chr2.3:43254841-43254860 None:intergenic 45.0%
TCTTCCCTCAAATGGATGCT+TGG - chr2.3:43255412-43255431 MS.gene98019:intron 45.0%
TGAAACAACCAGCTCCGAAA+CGG - chr2.3:43254901-43254920 MS.gene98019:intron 45.0%
TGGTTTCTATCTGGCTGTCA+AGG - chr2.3:43252474-43252493 MS.gene98019:intron 45.0%
TGTATCCCCGAGTCCTTATA+TGG - chr2.3:43252681-43252700 MS.gene98019:intron 45.0%
TGTGACATTTCCATTCCTGC+AGG + chr2.3:43251409-43251428 None:intergenic 45.0%
TTACAACTTAATCGCAGGGC+CGG + chr2.3:43250701-43250720 None:intergenic 45.0%
TTAGGTGTCAGTACAGGAGT+TGG + chr2.3:43254881-43254900 None:intergenic 45.0%
TTGACAGCCAGATAGAAACC+AGG + chr2.3:43252475-43252494 None:intergenic 45.0%
TTGGAAAGTAGGTCACTGGA+AGG + chr2.3:43251797-43251816 None:intergenic 45.0%
! AATGGATGTCACTTGGCTGT+TGG - chr2.3:43250732-43250751 MS.gene98019:intron 45.0%
! ACAACCCTCTCTTTTTACCC+GGG + chr2.3:43254457-43254476 None:intergenic 45.0%
! CACAACCCTCTCTTTTTACC+CGG + chr2.3:43254458-43254477 None:intergenic 45.0%
! CAGAGAGAGACTGCTAGTTT+AGG + chr2.3:43253211-43253230 None:intergenic 45.0%
! CCATATCCTGCATTTTCCAC+TGG - chr2.3:43255522-43255541 MS.gene98019:intron 45.0%
! CCCAAAGGGTTTTTGCACAA+AGG + chr2.3:43251877-43251896 None:intergenic 45.0%
! GAGGATACATGAGTGTTGTC+CGG + chr2.3:43253979-43253998 None:intergenic 45.0%
! GGTTTGAAATGTGGACATGG+TGG - chr2.3:43251895-43251914 MS.gene98019:CDS 45.0%
! TCGGAGCTGGTTGTTTCATT+AGG + chr2.3:43254899-43254918 None:intergenic 45.0%
! TCTCTTTCCTCTGCATTGGT+TGG - chr2.3:43252310-43252329 MS.gene98019:intron 45.0%
! TTTGGGCCCTCCAAATTTTG+TGG - chr2.3:43250647-43250666 MS.gene98019:intron 45.0%
!! AAGTTTTACGTTGGCTGTCG+AGG + chr2.3:43254486-43254505 None:intergenic 45.0%
!! ATATGATTTCGGTGCTGCAG+TGG + chr2.3:43250562-43250581 None:intergenic 45.0%
!! CCTATGTCCGTTGATTCAAG+TGG - chr2.3:43255090-43255109 MS.gene98019:intron 45.0%
!! GCCTTATTTAGGCCCTTATC+TGG - chr2.3:43252532-43252551 MS.gene98019:intron 45.0%
!! TTGGTGCCATATAAGGACTC+GGG + chr2.3:43252690-43252709 None:intergenic 45.0%
!! TTTCCTCTGCATTGGTTGGT+GGG - chr2.3:43252314-43252333 MS.gene98019:intron 45.0%
!! AAAAAAAAAAAAAAAATCAA+AGG + chr2.3:43250466-43250485 None:intergenic 5.0%
AAAGCGAGGTCTTGACTGCA+GGG + chr2.3:43255043-43255062 None:intergenic 50.0%
ACATTGCTAATGCACGCACG+TGG - chr2.3:43251451-43251470 MS.gene98019:intron 50.0%
ACTGTGCTCAGTGTACACCT+CGG - chr2.3:43252277-43252296 MS.gene98019:intron 50.0%
AGAAGATACCGTTTCGGAGC+TGG + chr2.3:43254912-43254931 None:intergenic 50.0%
AGAGGGCCATAGCCAATAGT+CGG + chr2.3:43253151-43253170 None:intergenic 50.0%
ATATCCGTTGTGGGAACTGC+CGG - chr2.3:43253957-43253976 MS.gene98019:intron 50.0%
ATCAAATAGACGAGGCCCCA+AGG + chr2.3:43252811-43252830 None:intergenic 50.0%
CAACACACCTTAGCACTCCT+TGG + chr2.3:43253007-43253026 None:intergenic 50.0%
CAAGCCCGGGTAAAAAGAGA+GGG - chr2.3:43254450-43254469 MS.gene98019:intron 50.0%
CCAGGGCCACAAAATTTGGA+GGG + chr2.3:43250656-43250675 None:intergenic 50.0%
CGGAGCCACATTATGTGTAC+TGG - chr2.3:43250227-43250246 MS.gene98019:CDS 50.0%
CGTGCACACACATACATGTG+TGG + chr2.3:43251068-43251087 None:intergenic 50.0%
CTCGTGATAGTCGCGTGTTA+TGG + chr2.3:43254722-43254741 None:intergenic 50.0%
GCCTTCCATTGGTCATCTAC+AGG + chr2.3:43254856-43254875 None:intergenic 50.0%
GCTAACAACCACCCGACTAT+TGG - chr2.3:43253136-43253155 MS.gene98019:intron 50.0%
GCTTCATTTGCAGCACACCA+TGG + chr2.3:43252422-43252441 None:intergenic 50.0%
GGCAAGTGCTAGCCAGATAA+GGG + chr2.3:43252547-43252566 None:intergenic 50.0%
GGCCTGATTCAACTCGCTTT+GGG - chr2.3:43250675-43250694 MS.gene98019:intron 50.0%
GGTCATCTACAGGACAATCC+AGG + chr2.3:43254846-43254865 None:intergenic 50.0%
GGTCCCAAGCATCCATTTGA+GGG + chr2.3:43255419-43255438 None:intergenic 50.0%
TAGAAACCAGGTGCACTTGC+AGG + chr2.3:43252463-43252482 None:intergenic 50.0%
TGAGCACAGTAGATAGGGCA+GGG + chr2.3:43252267-43252286 None:intergenic 50.0%
TGAGTTTCGAACGCAGGTCA+CGG - chr2.3:43250514-43250533 MS.gene98019:intron 50.0%
TGCTAAGTGCTACACGCCTT+GGG - chr2.3:43252792-43252811 MS.gene98019:intron 50.0%
TGGTCCCAAGCATCCATTTG+AGG + chr2.3:43255420-43255439 None:intergenic 50.0%
TTGACTGAAGGAGCTCCATG+AGG + chr2.3:43253998-43254017 None:intergenic 50.0%
! AACCACCCGACTATTGGCTA+TGG - chr2.3:43253142-43253161 MS.gene98019:intron 50.0%
! CCTCCAAATTTTGTGGCCCT+GGG - chr2.3:43250654-43250673 MS.gene98019:intron 50.0%
! CTCTCTTTTTACCCGGGCTT+GGG + chr2.3:43254451-43254470 None:intergenic 50.0%
! TGATTCAACTCGCTTTGGGC+CGG - chr2.3:43250679-43250698 MS.gene98019:intron 50.0%
!! ACAGTTTGGCTCTCAAAGCG+AGG + chr2.3:43255057-43255076 None:intergenic 50.0%
!! CTTTCCTCTGCATTGGTTGG+TGG - chr2.3:43252313-43252332 MS.gene98019:intron 50.0%
!! GATGTGTCCAAGGAGTGCTA+AGG - chr2.3:43252997-43253016 MS.gene98019:intron 50.0%
!! TCGTACAAGTGTCGGACACA+AGG - chr2.3:43253079-43253098 MS.gene98019:intron 50.0%
!! TGGTGCCATATAAGGACTCG+GGG + chr2.3:43252689-43252708 None:intergenic 50.0%
!! TTCCTCTGCATTGGTTGGTG+GGG - chr2.3:43252315-43252334 MS.gene98019:intron 50.0%
ACACGCGACTATCACGAGCA+CGG - chr2.3:43254724-43254743 MS.gene98019:intron 55.0%
AGGCCCAGGGCCACAAAATT+TGG + chr2.3:43250660-43250679 None:intergenic 55.0%
AGGGTTGCCTTTCGATCGGT+TGG - chr2.3:43251954-43251973 MS.gene98019:intron 55.0%
AGTTTCGAACGCAGGTCACG+GGG - chr2.3:43250516-43250535 MS.gene98019:intron 55.0%
ATGGTGCACTGGACACGCTA+AGG + chr2.3:43252403-43252422 None:intergenic 55.0%
CAAAGCGAGGTCTTGACTGC+AGG + chr2.3:43255044-43255063 None:intergenic 55.0%
CCAAGCCCGGGTAAAAAGAG+AGG - chr2.3:43254449-43254468 MS.gene98019:intron 55.0%
CCCAGGGCCACAAAATTTGG+AGG + chr2.3:43250657-43250676 None:intergenic 55.0%
CTGAGCACAGTAGATAGGGC+AGG + chr2.3:43252268-43252287 None:intergenic 55.0%
CTGCTAAGTGCTACACGCCT+TGG - chr2.3:43252791-43252810 MS.gene98019:intron 55.0%
GAGCACAGTAGATAGGGCAG+GGG + chr2.3:43252266-43252285 None:intergenic 55.0%
GAGGGCCATAGCCAATAGTC+GGG + chr2.3:43253150-43253169 None:intergenic 55.0%
GAGTTTCGAACGCAGGTCAC+GGG - chr2.3:43250515-43250534 MS.gene98019:intron 55.0%
GCTAAGTGCTACACGCCTTG+GGG - chr2.3:43252793-43252812 MS.gene98019:intron 55.0%
GGCAGTTCCCACAACGGATA+TGG + chr2.3:43253958-43253977 None:intergenic 55.0%
GGCTTGACCAACCGATCGAA+AGG + chr2.3:43251964-43251983 None:intergenic 55.0%
GGGCAAGTGCTAGCCAGATA+AGG + chr2.3:43252548-43252567 None:intergenic 55.0%
GGGCCTGATTCAACTCGCTT+TGG - chr2.3:43250674-43250693 MS.gene98019:intron 55.0%
GGTGTCAGTACAGGAGTTGG+CGG + chr2.3:43254878-43254897 None:intergenic 55.0%
TCCATTCCTGCAGGCACATC+AGG + chr2.3:43251400-43251419 None:intergenic 55.0%
TCCTGATGTGCCTGCAGGAA+TGG - chr2.3:43251396-43251415 MS.gene98019:intron 55.0%
TTAGCGTGTCCAGTGCACCA+TGG - chr2.3:43252402-43252421 MS.gene98019:intron 55.0%
TTGTCCGGCAGTTCCCACAA+CGG + chr2.3:43253964-43253983 None:intergenic 55.0%
! AAGCGAGTTGAATCAGGCCC+AGG + chr2.3:43250674-43250693 None:intergenic 55.0%
! AGCGAGTTGAATCAGGCCCA+GGG + chr2.3:43250673-43250692 None:intergenic 55.0%
! CCCTCCAAATTTTGTGGCCC+TGG - chr2.3:43250653-43250672 MS.gene98019:intron 55.0%
! CCTCTCTTTTTACCCGGGCT+TGG + chr2.3:43254452-43254471 None:intergenic 55.0%
! GGCCCAAAGCGAGTTGAATC+AGG + chr2.3:43250680-43250699 None:intergenic 55.0%
! TTTTTACCCGGGCTTGGGAC+CGG + chr2.3:43254446-43254465 None:intergenic 55.0%
AGCCCCACCAACCAATGCAG+AGG + chr2.3:43252320-43252339 None:intergenic 60.0%
AGGAGTTGGCGGCCTTCCAT+TGG + chr2.3:43254867-43254886 None:intergenic 60.0%
CACGCGACTATCACGAGCAC+GGG - chr2.3:43254725-43254744 MS.gene98019:intron 60.0%
CCACATCCTGCAAGTGCACC+TGG - chr2.3:43252454-43252473 MS.gene98019:intron 60.0%
CCAGGTGCACTTGCAGGATG+TGG + chr2.3:43252457-43252476 None:intergenic 60.0%
GGCCATAGCCAATAGTCGGG+TGG + chr2.3:43253147-43253166 None:intergenic 60.0%
GGTGCACTTGCAGGATGTGG+TGG + chr2.3:43252454-43252473 None:intergenic 60.0%
TGCAGCACACCATGGTGCAC+TGG + chr2.3:43252414-43252433 None:intergenic 60.0%
CCAAGGCCGGTCCCAAGCCC+GGG - chr2.3:43254437-43254456 MS.gene98019:CDS 75.0%
GCCAAGGCCGGTCCCAAGCC+CGG - chr2.3:43254436-43254455 MS.gene98019:CDS 75.0%
GGCTTGGGACCGGCCTTGGC+AGG + chr2.3:43254436-43254455 None:intergenic 75.0%
! CCCGGGCTTGGGACCGGCCT+TGG + chr2.3:43254440-43254459 None:intergenic 80.0%


Chromosome Type Strat End Strand Name
chr2.3 gene 43250224 43255655 43250224 ID=MS.gene98019
chr2.3 mRNA 43250224 43255655 43250224 ID=MS.gene98019.t1;Parent=MS.gene98019
chr2.3 exon 43255535 43255655 43255535 ID=MS.gene98019.t1.exon1;Parent=MS.gene98019.t1
chr2.3 CDS 43255535 43255655 43255535 ID=cds.MS.gene98019.t1;Parent=MS.gene98019.t1
chr2.3 exon 43254356 43254466 43254356 ID=MS.gene98019.t1.exon2;Parent=MS.gene98019.t1
chr2.3 CDS 43254356 43254466 43254356 ID=cds.MS.gene98019.t1;Parent=MS.gene98019.t1
chr2.3 exon 43251828 43251940 43251828 ID=MS.gene98019.t1.exon3;Parent=MS.gene98019.t1
chr2.3 CDS 43251828 43251940 43251828 ID=cds.MS.gene98019.t1;Parent=MS.gene98019.t1
chr2.3 exon 43250957 43251019 43250957 ID=MS.gene98019.t1.exon4;Parent=MS.gene98019.t1
chr2.3 CDS 43250957 43251019 43250957 ID=cds.MS.gene98019.t1;Parent=MS.gene98019.t1
chr2.3 exon 43250760 43250831 43250760 ID=MS.gene98019.t1.exon5;Parent=MS.gene98019.t1
chr2.3 CDS 43250760 43250831 43250760 ID=cds.MS.gene98019.t1;Parent=MS.gene98019.t1
chr2.3 exon 43250224 43250265 43250224 ID=MS.gene98019.t1.exon6;Parent=MS.gene98019.t1
chr2.3 CDS 43250224 43250265 43250224 ID=cds.MS.gene98019.t1;Parent=MS.gene98019.t1
Gene Sequence

>MS.gene98019

ATGCGGAGCCACATTATGTGTACTGGGTGTAGGAACATCTTGCTATACCCTAGAGGAGCAAGCAATGTTTGCTGTGCAGTGTGCAGCACAATTACCCCTGTTATTCCTGTTCTTCCTCCTGGTATCTTTCCTTTTACTGTTTTTGTTATCAAGATTTCAAGAATTTTCTTGCTCCATGCTCAGTGTGTTGAGTTAATTTGATTGCATACTTAGACTAAGCAGGGCCGGCGTTGATCCTTCCTTTGATTTTTTTTTTTTTTTTTAAACAGAAAATGTAATATTGCAAAACGTGAGTTTCGAACGCAGGTCACGGGGACATAATTAAAACGCATTTACCACTGCAGCACCGAAATCATATACTCAATTTAGTGGGAAATATTATATATACATTAAAAGAATATCCCCCTCATAAAATCAATTAAATTTGGGCCCTCCAAATTTTGTGGCCCTGGGCCTGATTCAACTCGCTTTGGGCCGGCCCTGCGATTAAGTTGTAAGTTTTTGCAGTAATGGATGTCACTTGGCTGTTGGTTCTTCCAATAGAAAAATTAACTCAATAATACTAGTTTTGTACATAATTGGACTCAAGTTCTATAAAATAGTTCAATTGCTGTCATGATTCCTCATTCCCGATGAAAACTAGTGTAGCATTTCGCCATCTTCATATGCTTTTTGGTGTATCATATCATCAACTTACCAAAGGAGTAACTTTTGTCATACTTGCCTCACTTTACAACTCTTTGTTGACGCTAAATATTGTAATTTTTTAGTTGATGTTTTGTTTTATTTTAAAAAGTATATTATACATTAAATTGAAAACTCCTTCTTGGAATAATTGGATCCACACATGTATGTGTGTGCACGCGTTTATGTATTGTAGGTAGGATATTCTTTTTTTATGCTGTGATATACGTATTCACTTAACTTGTCTGATCCAAATTAGGATCTAGAGGTTGGTAACGATGTTGTGCCCCATATTGATTTTTATTATCGTTATTAGTCCATATCTATAGTCAATTATATCCCATTTTTCTCTATTTAGCCAATTATCAACAAGGGATGCATACGTGAGTATAAAGTAGAAAGCAACTATGCAACTAGCCAGTTTAAAAGTTCACTTGTTCTTAGATTTAAACTATAATCTAAATGGTTACGTCCAGGGATCTAAAATTTCCTGATGTGCCTGCAGGAATGGAAATGTCACAACTTTATTGTGGAGGTTGTAGAACATTGCTAATGCACGCACGTGGAGCTACTACCGTGAGATGTTCCTGCTGTAACACTATAAATCTTGTGCCAGGTATGATATATATTTATAATTATGTGTTGCCAGATTTGTACAGCTTTTACACTGCATGCTAATTTGCTGATTGATTTACGTGTTGCTTGATCATTAAATACACTTAATTCATCGATGGTATACCAAATCCTGGTATACCCTTAATTTATAATTCTTTCCTTCCTTTCTTTTTTCCCCTTGCGGTGTATTTCAAGCTATATATGTCTGTGAGAAATTAAAGAATGTAAGCCAACTATATGTACATCATACTCAAACAAGTATTTGTTGACTCCTTCCAGTGACCTACTTTCCAAAAATATTGTACTGTTTAGCGAAGGATCATGAATAATTTTTTATATCTCACACACTTCCCTTTGTGCAAAAACCCTTTGGGTTTGAAATGTGGACATGGTGGGGAAATTCAGTTTTATTCATAAGAATGGGATCGAAAAGGGTTGCCTTTCGATCGGTTGGTCAAGCCGTCTAAAAGTTTAATATGTTTGGTAAAATGCTTTTTTTGTCTCTAATAACTAAAAAATTCTGCAATAAATCCATTTAACGTAATATCTTCTGATTATTCCATGGACAGCATAATTTTAATTATAATTCCTTACTATAAATCACGAAGGTGTGTGGTATAGTTGAGACATAGGTTTTGGCATATCGTTCTAAAATTATCTTTCCCAACATGGTATTAGGATGGATACTTGATGAACCATGCAATATTTTTGTAGTTAACTGACTGTGTTTCAACTTCGATCCCCTGCCCTATCTACTGTGCTCAGTGTACACCTCGGTGTAGCCTTTTCTCTTTCCTCTGCATTGGTTGGTGGGGCTGTAGAGTTACTGTTGCTGAGCATTATCTTCACTGGCCTACCTCACTGTCATCCTTAATATCCTTAGCGTGTCCAGTGCACCATGGTGTGCTGCAAATGAAGCTGTTGTGTGCCACCACATCCTGCAAGTGCACCTGGTTTCTATCTGGCTGTCAAGGGATGTCGTTCCATTTAACTCGATAATTTTTGTCCGGCCTTATTTAGGCCCTTATCTGGCTAGCACTTGCCCAAAGCCACTTTGATACCTTGAAGTTTCACTTTTGGGTTTTTGTAGACACAATGATGGTAGAGACCCTTATTTTCACCCATACTGTGTTGATTGAGTCTTCTAGCCTAATTTTTTGTATCCCCGAGTCCTTATATGGCACCAATCAGTCTCTTCAAGCATGGTTTCATAGGTTCAGTTTGTTATCACACAATTTGATATTATTTTGAATAAATTTAACCTTCTACTGCTAAGTGCTACACGCCTTGGGGCCTCGTCTATTTGATTGTGTACGAATGATATTATGATAGATCTGGTATCAAGACAGTAAAGGAAATTGAATTCTAATGCTAAAAGATCAAATAAAACTTTCCTTGATCTGTTTCAATTCACAACTCCACAATCATCATTGTTTCGACAGATCTTTTACTCTTGTATCATAGATTTGTCTGAGATGTGTCCAAGGAGTGCTAAGGTGTGTTGAAGCAAAAGAAAGAAGAAAAAAAAAGTTTTTTGGGGACATTTGTCTGAGTTGTCGTACAAGTGTCGGACACAAGGACACACACAATCTCAGGGGAGAGCGTGCTTCATAGCTAACAACCACCCGACTATTGGCTATGGCCCTCTCCATTTCTTGTTTAGTGAATAAACAATCAATTTGATCCCTAAACTAGCAGTCTCTCTCTGTGTCCAAATTGGTCCCTAAACTATTAAAACCTACTAAAGGGTCCGTAAACTATTCCTCCATCCAACTATTGCCCAATTGTTGTCGTATTATCGTTTGGGTGATCACCATGACATATAATTCTCGTTAAATAAACATTTTCCCCCATTTTTAGACCAAAGGTTTTGGCAAACCCTGTTTATTTTTTTAGGAATTGAAGTGGCACAAAGATGGTACAGTTTTTGTTATACGTTAAACCATTCTTGTTCCTAACTATTGAAGTATTTGGAACAGTTGGATATGACTCATATGAGCATATCAACATAAAAGTCGAATAAACCTGCCTATGATTTTTTTTTTTCCTAATCAATATCATCCACTTGCAGTAATTCATTATCTGTAAACTACAAAAACAAGAGAGAATCTTGGTCATTTGGATATGAGCATAACCCGAAATTCAGATTAGTTTTAAATAACTTGATTAGTTTTCTATGCTTGATGAAAGTTTGTATTGAAAAATGCTGTCATTATTATCCACATAGCTCAATAATTAGGGTGTTTTAAATGTAAAAATTTACGTGTAAACTTTAGGATGTTTGGTGTTCATGAAGTTTCATTTAGTTAGTTCCATTTTCTTCATCTATGGATATTTTATTTTATTTTAATAATTAATGTTGCCAATCATACATGCTAAGTTGTTTACTGACTTATTGTTGGCTTTGCCTTTAAAGATTCTAATCAAATGAACCATATCCGTTGTGGGAACTGCCGGACAACACTCATGTATCCTCATGGAGCTCCTTCAGTCAAATGTGCAGTTTGTCACTATATTACTAATGTCGATGTAAGTGTACATTGATGGATTATATTAATCTGTTATTTCACTTTCTATTTTCACAAATATTTTCAGTAAATTAATTCTGTTGATCTGGAGTTCATTTTGTTGTAAACTTAGTTAGTTGTGCCAATCAAGATTCTATTTTGATAAGCTTGTAGCTAAAGATTTTAGACTGATTGGATTTGAAGAATAGGAAGTAAAGTTGTAGCTAATTGATTATGTTTTATGATTAACTTGTTGAAAATCAGAAAATAATTGGTCAGATTATGTCATTTTGTTCGGGCTTTAATTTGTTGGGTAGTTTCTGCAGTTATTAGAACCATCTGCACTATGTTGAAAGATATTTAAGAAAAGAAAGACAGGATCATAGGAAAGAACTATAAAAATCCTGCCAAGGCCGGTCCCAAGCCCGGGTAAAAAGAGAGGGTTGTGTTAGGCCTCGACAGCCAACGTAAAACTTTGTCGAATCTCTATGACATGGACCAAATACGAAATAGTGTATTCGTTTTGGAACATGGAATATAGGTAGGAAAGAACTATAAAAGCTTGATATAGATGGGTACATAAATGTTATGATGCATGTTATTTTAATAGAAAAAGATTGCATTTATTGTTATACACATTACTTCAAATATATTTTAGGATTCTGGTACTTGTATGGTTATAACTGTCTCCATAACACGCGACTATCACGAGCACGGGTTCAAATTCCTCTATGCCTGCAATTTACTTGATATCAGTCGTCAACATTTTGCATTTTATGTGGTTTTGTATTGAGCTGATATCTTTTACCCTTTCCTGGATTGTCCTGTAGATGACCAATGGAAGGCCGCCAACTCCTGTACTGACACCTAATGAAACAACCAGCTCCGAAACGGTATCTTCTACTGCATCACTATGCTGTTGACTTTCTTTCTTTTGGTGATTATTCATATTACATGTCAAATTATTGTTATGACATTGATATCTAACAAATATACATGTGATCTCAATACCCTGCAGTCAAGACCTCGCTTTGAGAGCCAAACTGTAGTAGTAGAAAATCCTATGTCCGTTGATTCAAGTGGGAAATTGGTAATTGCTATCTCTTTTATTTTTTTGTTAGTTTTGGATATATATTTTTTGAGTAAATATGTTTACTCCCTATAGAATAAGTGAATTTTGGTTCTGGTCCCCTGAAAAAAGAAACTTTGATTTTTATTCCTTCATAATTTGAGATGACTATTTTTGGTCCCTACCGACATGTGACATTCCTTAACTGCCTGTGTCTAATCACTACTGATATGTCATGTCATCTCTAATGGCACCTAATAATTTCTATACTCATAACGTAACTTTAGCACGGATTCTCCTAAAATGAATTATTTCTTCCCTCAAATGGATGCTTGGGACCAAATCAGTAATTTCAGATTTGAGTGATGAAAACTATAAAATATTTTACAGGAATCTTAATTAAAAGTTTCCATTGTATAGTTACCATATCCTGCATTTTCCACTGGTTCACTGATTTTATTTTTGTGATATTTGAGCAAAACAAGATTTAATTTTAAGAATGTGAACTGGCACAGGTAAGCAATGTTGTTGTCGGTGTTACAACAGAGAAGAAATGA
Protein sequence

>MS.gene98019.t1

MRSHIMCTGCRNILLYPRGASNVCCAVCSTITPVIPVLPPGMEMSQLYCGGCRTLLMHARGATTVRCSCCNTINLVPDSNQMNHIRCGNCRTTLMYPHGAPSVKCAVCHYITNVDMTNGRPPTPVLTPNETTSSETSRPRFESQTVVVENPMSVDSSGKLVSNVVVGVTTEKK