AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene98037

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene98037.t1 MTR_5g075410 95.929 786 32 0 1 786 1 786 0.0 1532
MS.gene98037.t1 MTR_3g467380 55.952 840 300 14 1 778 1 832 0.0 851
MS.gene98037.t1 MTR_4g028130 42.943 836 396 12 1 777 1 814 0.0 613
MS.gene98037.t1 MTR_4g028130 41.627 836 371 12 1 777 1 778 0.0 582
MS.gene98037.t1 MTR_4g028130 45.008 591 291 7 1 578 1 570 9.00e-160 479
MS.gene98037.t1 MTR_2g011940 41.241 548 222 12 283 774 305 808 3.03e-110 357
MS.gene98037.t1 MTR_2g011940 43.066 137 60 5 6 135 22 147 1.36e-23 107
MS.gene98037.t1 MTR_2g011940 47.138 297 117 4 283 578 314 571 8.57e-78 264
MS.gene98037.t1 MTR_2g011940 42.424 132 68 4 6 135 31 156 8.76e-24 107
MS.gene98037.t1 MTR_2g011940 47.138 297 117 4 283 578 314 571 1.65e-77 263
MS.gene98037.t1 MTR_2g011940 42.424 132 68 4 6 135 31 156 1.27e-23 107
MS.gene98037.t1 MTR_7g073240 49.189 185 89 3 254 434 52 235 6.44e-51 182
MS.gene98037.t1 MTR_7g073240 54.054 74 33 1 506 578 245 318 3.18e-16 81.6
MS.gene98037.t1 MTR_7g083700 48.235 85 43 1 321 404 126 210 1.27e-18 88.2
MS.gene98037.t1 MTR_7g059330 39.216 102 60 2 321 420 623 724 1.94e-15 81.3
MS.gene98037.t1 MTR_1g058350 37.037 135 64 6 302 422 54 181 5.72e-15 77.4
MS.gene98037.t1 MTR_5g053920 41.818 110 47 4 321 417 194 299 3.27e-14 75.5
MS.gene98037.t1 MTR_7g117455 38.462 91 51 3 321 408 117 205 2.28e-13 73.6
MS.gene98037.t1 MTR_7g105370 41.176 102 50 5 326 421 65 162 6.61e-13 70.9
MS.gene98037.t1 MTR_1g093600 31.429 140 76 5 321 442 191 328 1.92e-11 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene98037.t1 AT4G32010 41.019 746 315 14 3 706 4 666 3.91e-175 523
MS.gene98037.t1 AT4G32010 40.800 750 315 15 3 706 4 670 2.94e-173 518
MS.gene98037.t1 AT2G30470 39.976 828 348 22 1 774 6 738 4.23e-172 515
MS.gene98037.t1 AT4G21550 53.247 154 67 3 287 437 291 442 8.75e-44 166
MS.gene98037.t1 AT4G21550 43.956 91 51 0 3 93 14 104 2.46e-21 99.0
MS.gene98037.t1 AT4G21550 53.247 154 67 3 287 437 291 442 2.35e-43 168
MS.gene98037.t1 AT4G21550 43.956 91 51 0 3 93 14 104 3.15e-21 99.8
MS.gene98037.t1 AT4G21550 40.336 119 56 4 657 774 551 655 2.61e-12 70.9
MS.gene98037.t1 AT4G21550 53.247 154 67 3 287 437 291 442 2.50e-43 166
MS.gene98037.t1 AT4G21550 44.944 89 49 0 5 93 16 104 4.19e-21 98.6
MS.gene98037.t1 AT3G26790 45.882 85 45 1 321 404 91 175 6.37e-18 85.9
MS.gene98037.t1 AT3G24650 41.176 102 58 2 321 420 571 672 7.12e-16 82.4
MS.gene98037.t1 AT1G28300 41.000 100 57 2 321 419 170 268 1.70e-15 79.3
MS.gene98037.t1 AT5G06250 35.135 148 73 6 310 439 37 179 2.47e-15 77.4
MS.gene98037.t1 AT5G06250 35.135 148 73 6 310 439 37 179 2.70e-15 77.8
MS.gene98037.t1 AT4G01500 43.820 89 47 2 321 408 35 121 3.07e-15 78.2
MS.gene98037.t1 AT5G06250 35.135 148 73 6 310 439 37 179 3.34e-15 77.4
MS.gene98037.t1 AT2G36080 39.815 108 56 4 321 421 37 142 3.69e-15 74.7
MS.gene98037.t1 AT2G36080 39.815 108 56 4 321 421 37 142 3.69e-15 74.7
MS.gene98037.t1 AT5G06250 35.135 148 73 6 310 439 37 179 3.92e-15 77.0
MS.gene98037.t1 AT5G06250 35.135 148 73 6 310 439 37 179 5.08e-15 76.6
MS.gene98037.t1 AT2G36080 39.815 108 56 4 321 421 37 142 6.50e-15 75.5
MS.gene98037.t1 AT2G36080 39.815 108 56 4 321 421 37 142 7.46e-15 75.5
MS.gene98037.t1 AT2G46870 40.659 91 49 3 321 408 34 122 7.85e-15 76.6
MS.gene98037.t1 AT1G13260 42.391 92 47 3 321 408 187 276 9.08e-15 77.0
MS.gene98037.t1 AT3G25730 38.318 107 57 4 321 420 182 286 3.22e-14 75.1
MS.gene98037.t1 AT3G61970 38.298 94 50 3 321 408 22 113 8.20e-14 73.6
MS.gene98037.t1 AT1G68840 41.935 93 47 3 321 408 187 277 2.24e-13 72.8
MS.gene98037.t1 AT1G68840 41.935 93 47 3 321 408 187 277 2.24e-13 72.8
MS.gene98037.t1 AT1G01030 40.860 93 46 4 321 408 55 143 4.87e-13 71.6
MS.gene98037.t1 AT1G01030 40.860 93 46 4 321 408 55 143 5.85e-13 71.6
MS.gene98037.t1 AT3G11580 36.752 117 55 5 321 421 28 141 6.61e-13 70.1
MS.gene98037.t1 AT3G11580 36.752 117 55 5 321 421 28 141 6.67e-12 66.6
MS.gene98037.t1 AT3G11580 36.752 117 55 5 321 421 28 141 6.67e-12 66.6
MS.gene98037.t1 AT3G11580 36.752 117 55 5 321 421 28 141 6.67e-12 66.6
MS.gene98037.t1 AT3G11580 36.752 117 55 5 321 421 28 141 1.28e-11 67.8

Find 197 sgRNAs with CRISPR-Local

Find 368 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCTCAATTGTTACAATATT+TGG 0.086549 5.1:+57900405 None:intergenic
ATTCAAGAACACAAGCTTTC+AGG 0.213336 5.1:-57899471 MS.gene98037:CDS
ACTTAACACCTTCTCAAATA+AGG 0.237548 5.1:+57901412 None:intergenic
CCCGCATTTGTTGCAGAGTT+TGG 0.256841 5.1:+57903968 None:intergenic
TATGATTAATTTGATTGTTT+TGG 0.258238 5.1:+57899190 None:intergenic
CAACTGCTTCAGATTCTAAT+TGG 0.263143 5.1:+57899217 None:intergenic
TTCTAACGGCATTTCGATAA+AGG 0.267420 5.1:-57900766 MS.gene98037:CDS
ATCAGTTACTTTCTCGATAC+TGG 0.269074 5.1:-57901872 MS.gene98037:CDS
TTTACAGTTCCAAGATATAA+TGG 0.271409 5.1:-57901186 MS.gene98037:CDS
TATACCTCAGCACACGCTTT+TGG 0.274011 5.1:+57901353 None:intergenic
TGAAGACTTTCTTGTTCCTT+TGG 0.285526 5.1:+57899884 None:intergenic
AAGAAGAGGTCTCGCAATAT+TGG 0.296576 5.1:-57900531 MS.gene98037:CDS
TACATCCTACTGTTATTATT+AGG 0.308177 5.1:+57901131 None:intergenic
AACGGGGAACCTTACTTAAA+TGG 0.309832 5.1:-57900666 MS.gene98037:CDS
ACGGATGAGGGAAGCCTAAA+TGG 0.318513 5.1:-57899114 MS.gene98037:CDS
CAATTAAATGCTGGTGATAC+TGG 0.325898 5.1:-57901071 MS.gene98037:intron
AATGTAGTAAATGCTGTTAA+AGG 0.330641 5.1:+57902176 None:intergenic
CATCATATTCTTCAAATACT+TGG 0.347609 5.1:+57900382 None:intergenic
CTGCCGTTGGCCTCTGAGAT+TGG 0.350593 5.1:-57902062 MS.gene98037:CDS
TTACAGTTCCAAGATATAAT+GGG 0.352438 5.1:-57901185 MS.gene98037:CDS
CCTCAGAATTTGAACTCATT+AGG 0.359994 5.1:-57900723 MS.gene98037:CDS
AGGATACTGAAAATCATAAT+AGG 0.362554 5.1:-57902451 MS.gene98037:CDS
CCTCAAGCTGACCTCCATTT+AGG 0.367489 5.1:+57899100 None:intergenic
GCAAACATCTCAGTCTATAT+TGG 0.370039 5.1:-57901994 MS.gene98037:CDS
AAATTCCACCGTCATGAAAC+TGG 0.376289 5.1:-57902839 MS.gene98037:CDS
GCCTAGTGCTGCGGGACAAT+TGG 0.377079 5.1:-57899070 MS.gene98037:CDS
TTCAATCAATGAAAGGTAAC+GGG 0.377988 5.1:-57900683 MS.gene98037:CDS
CTTGTTCCTTTGGACCGAGC+TGG 0.382544 5.1:+57899894 None:intergenic
TGAGGTGCACCAGAAAAGTT+TGG 0.383323 5.1:+57900741 None:intergenic
TAATATGACTAGTCATGCTT+TGG 0.383891 5.1:+57898994 None:intergenic
GATGGCATGGTTTCATGTAT+TGG 0.390905 5.1:-57902275 MS.gene98037:CDS
AAAACCAGTGCCTCTCCATC+AGG 0.394979 5.1:-57900240 MS.gene98037:CDS
ACATTCAGAACATCTGCGTT+TGG 0.398523 5.1:-57900643 MS.gene98037:CDS
GAACATCTGCGTTTGGGTAA+TGG 0.398608 5.1:-57900636 MS.gene98037:CDS
CAATGGTCCATTGCAGCAAC+TGG 0.398704 5.1:-57900568 MS.gene98037:CDS
CAATTCTACACAACTGCATA+AGG 0.399404 5.1:+57902339 None:intergenic
CCGAGTGATGCAGGTCGAAT+TGG 0.400991 5.1:-57901389 MS.gene98037:CDS
CATTCAGAACATCTGCGTTT+GGG 0.404927 5.1:-57900642 MS.gene98037:CDS
AACAATGCAAGTGATCGATA+TGG 0.408713 5.1:-57902410 MS.gene98037:CDS
ATGAGTCTTGAAACAAATAA+AGG 0.410706 5.1:-57901945 MS.gene98037:CDS
AGTTTCCATTTCTTCATGAC+TGG 0.412100 5.1:+57899032 None:intergenic
TCATCCCAGTCATGAAGAAA+TGG 0.415741 5.1:-57899037 MS.gene98037:CDS
AGAAGAGGTCTCGCAATATT+GGG 0.416834 5.1:-57900530 MS.gene98037:CDS
TAAGCCCTCCCAGCTTTGTC+TGG 0.424644 5.1:-57902608 MS.gene98037:intron
TCGTTCGAGTACCTTGATTT+CGG 0.425356 5.1:-57902655 MS.gene98037:CDS
AGGCAAGGCAAGTGCATGTC+GGG 0.425926 5.1:+57899292 None:intergenic
ACTCGTTCCCCATTATATCT+TGG 0.426035 5.1:+57901177 None:intergenic
CTTAACACCTTCTCAAATAA+GGG 0.428464 5.1:+57901413 None:intergenic
GAATTGACACTTAACTTCTT+CGG 0.430100 5.1:+57902244 None:intergenic
TGGAAACTGATACATATAAC+AGG 0.432852 5.1:-57899017 MS.gene98037:CDS
TCTGAATGTCCATTTAAGTA+AGG 0.433067 5.1:+57900657 None:intergenic
TAACAGTAGGATGTATGTAT+TGG 0.435051 5.1:-57901123 MS.gene98037:CDS
CTTATGCAGTTGTGTAGAAT+TGG 0.437808 5.1:-57902338 MS.gene98037:CDS
TATTGTAAGGAAGGTTCAAC+TGG 0.440184 5.1:-57904032 MS.gene98037:CDS
CTCTTTGAGCTTGTGACCAA+CGG 0.442148 5.1:+57902297 None:intergenic
GGGTGGTCTTTGATCTCTGG+TGG 0.449691 5.1:-57903996 MS.gene98037:CDS
ACATTTAGTCGGATAGATCC+TGG 0.451349 5.1:-57900969 MS.gene98037:CDS
CCAGCTGACGACGACTCGTC+AGG 0.453820 5.1:+57899399 None:intergenic
CAAGAGCTGGAGAAATTGTC+GGG 0.454716 5.1:-57901834 MS.gene98037:CDS
AAAGGGTGGTCTTTGATCTC+TGG 0.456650 5.1:-57903999 MS.gene98037:CDS
ACAGAAATGTGAATTCTCAT+AGG 0.465032 5.1:+57902865 None:intergenic
CTGCATTGGCAAGAGCATCT+AGG 0.465149 5.1:+57899448 None:intergenic
ATGAATAATTATTGTAAGGA+AGG 0.465785 5.1:-57904041 MS.gene98037:CDS
AAGAAATTCTGTTCTGCCGT+TGG 0.473954 5.1:-57902075 MS.gene98037:CDS
CCTGACGAGTCGTCGTCAGC+TGG 0.478183 5.1:-57899399 MS.gene98037:CDS
CCAAACTCTGCAACAAATGC+GGG 0.482509 5.1:-57903968 MS.gene98037:intron
CATTCAACCACCAAGTGGAC+AGG 0.483217 5.1:-57899325 MS.gene98037:CDS
TGGGTAATGGAACTGCTGAT+TGG 0.484375 5.1:-57900623 MS.gene98037:CDS
TTTATTTGTTTCAAGACTCA+TGG 0.486601 5.1:+57901947 None:intergenic
CTATGGAATTGAGACTTACA+TGG 0.489129 5.1:-57900470 MS.gene98037:CDS
ACAATATTTGGCTTGACACT+AGG 0.490295 5.1:+57900417 None:intergenic
TTTAACAGCATTTACTACAT+TGG 0.491046 5.1:-57902174 MS.gene98037:CDS
GCATCGTAAGGCTCTTGAAC+CGG 0.491358 5.1:+57899253 None:intergenic
CAGTAGGATGTATGTATTGG+AGG 0.492186 5.1:-57901120 MS.gene98037:CDS
GCCAAATATTGTAACAATTG+AGG 0.493508 5.1:-57900406 MS.gene98037:CDS
CCTTCACATCAGCAGGTGGC+CGG 0.497637 5.1:+57901901 None:intergenic
CATTCATAGCGAAGATGCTA+TGG 0.498765 5.1:-57900487 MS.gene98037:CDS
GTGTATGAATAATTATTGTA+AGG 0.498958 5.1:-57904045 MS.gene98037:CDS
ATTGCCTAAAACTGCTGCAT+TGG 0.500146 5.1:+57899434 None:intergenic
AACTTATACCACCGAAATCA+AGG 0.500512 5.1:+57902644 None:intergenic
CCGGCCACCTGCTGATGTGA+AGG 0.500794 5.1:-57901901 MS.gene98037:CDS
GTGTTAAGTCCGAGTGATGC+AGG 0.501935 5.1:-57901398 MS.gene98037:CDS
TCAGCAGGTGGCCGGCGTGG+TGG 0.502029 5.1:+57901909 None:intergenic
GTTTCCATTTCTTCATGACT+GGG 0.503416 5.1:+57899033 None:intergenic
GGTGGTCTTTGATCTCTGGT+GGG 0.503585 5.1:-57903995 MS.gene98037:CDS
TCAAGAGCTGGAGAAATTGT+CGG 0.505861 5.1:-57901835 MS.gene98037:CDS
TTACCCTGATGGAGAGGCAC+TGG 0.511162 5.1:+57900236 None:intergenic
ATTATATCTTGGAACTGTAA+AGG 0.513021 5.1:+57901188 None:intergenic
TCAACTGGTGAATGGAAGAA+AGG 0.514062 5.1:-57904017 MS.gene98037:CDS
CGGCCACCTGCTGATGTGAA+GGG 0.515875 5.1:-57901900 MS.gene98037:CDS
TTAACCTTACCAGACAAAGC+TGG 0.516700 5.1:+57902599 None:intergenic
CTTCAATCAATGAAAGGTAA+CGG 0.516842 5.1:-57900684 MS.gene98037:CDS
ATTGGAGAAGGTAAACTTGA+GGG 0.521191 5.1:-57902044 MS.gene98037:CDS
AGCTCTTGATCAGTAATCCT+TGG 0.521679 5.1:+57901849 None:intergenic
GGTATATAATCTTACCCTGA+TGG 0.522702 5.1:+57900225 None:intergenic
AAACATCCGAGGCATCGTCC+TGG 0.526966 5.1:-57899366 MS.gene98037:CDS
AGGAAGGTTCAACTGGTGAA+TGG 0.526974 5.1:-57904025 MS.gene98037:CDS
CGATATGGTGAACATATTGA+TGG 0.528805 5.1:-57902395 MS.gene98037:CDS
TACAAGTCACTCAACGGATG+AGG 0.528930 5.1:-57899127 MS.gene98037:CDS
TTGTTACAGTAACATTTAGT+CGG 0.530093 5.1:-57900980 MS.gene98037:intron
TGAAACGCTTTCACTAAAGA+TGG 0.532158 5.1:-57902114 MS.gene98037:CDS
CCAATTCGACCTGCATCACT+CGG 0.532323 5.1:+57901389 None:intergenic
TTTCAGTTTCAGAGAAGAAG+AGG 0.532408 5.1:-57900545 MS.gene98037:CDS
AATCTTCTTCAATCAATGAA+AGG 0.533019 5.1:-57900690 MS.gene98037:CDS
ACTGAAACCAGTTGCTGCAA+TGG 0.534324 5.1:+57900561 None:intergenic
TTGGCTCAACTATCAAAGAC+TGG 0.539999 5.1:-57901975 MS.gene98037:CDS
ATCACCAGCATTTAATTGCA+AGG 0.546441 5.1:+57901076 None:intergenic
ATTAATCATATAGATGAAGC+AGG 0.546533 5.1:-57899177 MS.gene98037:CDS
CAGTCCTTGCAATTAAATGC+TGG 0.547662 5.1:-57901080 MS.gene98037:CDS
AGACTACTGGTGGAACAAGC+TGG 0.549005 5.1:-57902371 MS.gene98037:CDS
TAACCTTACCAGACAAAGCT+GGG 0.549034 5.1:+57902600 None:intergenic
GTGCATCCAGGACGATGCCT+CGG 0.549949 5.1:+57899360 None:intergenic
TACTTTCTCGATACTGGCCA+AGG 0.550936 5.1:-57901866 MS.gene98037:CDS
GTTGTTGAGCCTAGTGCTGC+GGG 0.553930 5.1:-57899078 MS.gene98037:CDS
CCGGCGCTTAAGAGTCTCAC+AGG 0.559293 5.1:+57899272 None:intergenic
CAACTGGTGAATGGAAGAAA+GGG 0.559758 5.1:-57904016 MS.gene98037:CDS
TGTAGTGCCCTTATTTGAGA+AGG 0.560033 5.1:-57901420 MS.gene98037:CDS
ATTGACTTCTGTTGTTACAC+AGG 0.561453 5.1:-57900916 MS.gene98037:intron
TCCAATTGTCCCGCAGCACT+AGG 0.562994 5.1:+57899069 None:intergenic
TCCATCCAGTTTCATGACGG+TGG 0.564496 5.1:+57902834 None:intergenic
AATTGCAAGGACTGTATGCA+AGG 0.565036 5.1:+57901089 None:intergenic
ACTATACATCCACTGTGGAT+AGG 0.566036 5.1:+57902688 None:intergenic
GGAAAATAATAGACCAACAT+GGG 0.566824 5.1:-57902153 MS.gene98037:CDS
TTATTTCATTTAGGAACCCC+CGG 0.568626 5.1:-57900277 MS.gene98037:intron
AAGGATTACTGATCAAGAGC+TGG 0.569540 5.1:-57901847 MS.gene98037:CDS
GCCAAACTCTGCAACAAATG+CGG 0.571705 5.1:-57903969 MS.gene98037:CDS
ATCAGACCAGCTCGGTCCAA+AGG 0.576061 5.1:-57899900 MS.gene98037:CDS
TCCTCCATCCAGTTTCATGA+CGG 0.576172 5.1:+57902831 None:intergenic
CACACGATACAAGTGCATCC+AGG 0.576195 5.1:+57899348 None:intergenic
TTCCCCTTCACATCAGCAGG+TGG 0.578031 5.1:+57901897 None:intergenic
AGTAGGATGTATGTATTGGA+GGG 0.578641 5.1:-57901119 MS.gene98037:CDS
TTCGAGTACCTTGATTTCGG+TGG 0.580235 5.1:-57902652 MS.gene98037:CDS
TAAGTGTCAATTCAACAAAG+AGG 0.581056 5.1:-57902234 MS.gene98037:CDS
CTTACCAGACAAAGCTGGGA+GGG 0.582135 5.1:+57902604 None:intergenic
ACATCAGCAGGTGGCCGGCG+TGG 0.583280 5.1:+57901906 None:intergenic
CCTGTGAGACTCTTAAGCGC+CGG 0.585911 5.1:-57899272 MS.gene98037:CDS
CATTTAGTCGGATAGATCCT+GGG 0.586278 5.1:-57900968 MS.gene98037:CDS
TTTGGCCTAATAATAACAGT+AGG 0.589295 5.1:-57901136 MS.gene98037:CDS
GCTTAAAACTGCACATAGTG+AGG 0.592237 5.1:-57900601 MS.gene98037:CDS
CCTAATGAGTTCAAATTCTG+AGG 0.592495 5.1:+57900723 None:intergenic
CTTTCACTAAAGATGGCTCT+AGG 0.593793 5.1:-57902107 MS.gene98037:CDS
ACAAGCTCAAAGAGATGGCA+TGG 0.595112 5.1:-57902288 MS.gene98037:CDS
GGTTGTTGAGCCTAGTGCTG+CGG 0.595679 5.1:-57899079 MS.gene98037:CDS
ACAAGTCACTCAACGGATGA+GGG 0.597566 5.1:-57899126 MS.gene98037:CDS
ATAGATGAAGCAGGTACTAG+TGG 0.598221 5.1:-57899168 MS.gene98037:CDS
CTGGTGGAACAAGCTGGCAA+AGG 0.598804 5.1:-57902365 MS.gene98037:CDS
TATTGATGGTAGACTACTGG+TGG 0.600333 5.1:-57902381 MS.gene98037:CDS
GGCCACCTGCTGATGTGAAG+GGG 0.601780 5.1:-57901899 MS.gene98037:CDS
TGGTCACAAGCTCAAAGAGA+TGG 0.603653 5.1:-57902293 MS.gene98037:CDS
CAGGCAAGGCAAGTGCATGT+CGG 0.603970 5.1:+57899291 None:intergenic
ACATATTGATGGTAGACTAC+TGG 0.604398 5.1:-57902384 MS.gene98037:CDS
TCCACCGTCATGAAACTGGA+TGG 0.604497 5.1:-57902835 MS.gene98037:CDS
ATTGCAAGGACTGTATGCAA+GGG 0.607548 5.1:+57901090 None:intergenic
ATATTGGGACGAAAACTAAG+AGG 0.609627 5.1:-57900515 MS.gene98037:CDS
AAGATATAATGGGGAACGAG+TGG 0.614024 5.1:-57901175 MS.gene98037:CDS
GCTTAAGAGTCTCACAGGCA+AGG 0.617723 5.1:+57899277 None:intergenic
TTGGCCTCTGAGATTGGAGA+AGG 0.619422 5.1:-57902056 MS.gene98037:CDS
CCTAAATGGAGGTCAGCTTG+AGG 0.620594 5.1:-57899100 MS.gene98037:CDS
TTGTGTAGAATTGGTGAAGT+CGG 0.620883 5.1:-57902329 MS.gene98037:CDS
TACAGTTCCAAGATATAATG+GGG 0.621280 5.1:-57901184 MS.gene98037:CDS
AAACCAGTGCCTCTCCATCA+GGG 0.622368 5.1:-57900239 MS.gene98037:intron
TCTACATCTTCTCATTCTAA+CGG 0.622522 5.1:-57900780 MS.gene98037:CDS
ACAAGATACAAGTCACTCAA+CGG 0.624174 5.1:-57899133 MS.gene98037:CDS
CAGCTGACGACGACTCGTCA+GGG 0.628337 5.1:+57899400 None:intergenic
TGATCTCTCATCCACCACGC+CGG 0.630532 5.1:-57901920 MS.gene98037:CDS
ATAATCTTACCCTGATGGAG+AGG 0.631070 5.1:+57900230 None:intergenic
GATGAAGCAGGTACTAGTGG+TGG 0.639251 5.1:-57899165 MS.gene98037:CDS
ATTCAACCACCAAGTGGACA+GGG 0.641900 5.1:-57899324 MS.gene98037:CDS
AAGTCGGTGAATCAAGCCGT+TGG 0.642223 5.1:-57902313 MS.gene98037:CDS
GGTTCTGCATCAGACCAGCT+CGG 0.642711 5.1:-57899908 MS.gene98037:CDS
TGGAAAATAATAGACCAACA+TGG 0.644227 5.1:-57902154 MS.gene98037:CDS
CTGGTGAATGGAAGAAAGGG+TGG 0.646177 5.1:-57904013 MS.gene98037:CDS
TTTGGCTTGACACTAGGCGG+CGG 0.654279 5.1:+57900423 None:intergenic
GTGTGCATTCAACCACCAAG+TGG 0.657426 5.1:-57899330 MS.gene98037:CDS
CCTTCTGATTGCAAAATACG+AGG 0.659510 5.1:+57901215 None:intergenic
TCTCCAATCTCAGAGGCCAA+CGG 0.662250 5.1:+57902059 None:intergenic
TTGCAAGGACTGTATGCAAG+GGG 0.665717 5.1:+57901091 None:intergenic
ATATTTGGCTTGACACTAGG+CGG 0.666538 5.1:+57900420 None:intergenic
GTTAGAATGAGAAGATGTAG+AGG 0.666828 5.1:+57900782 None:intergenic
TAAAACTGCACATAGTGAGG+AGG 0.667263 5.1:-57900598 MS.gene98037:CDS
GAAATGCAGCAATTGCAGCA+AGG 0.667427 5.1:-57902810 MS.gene98037:intron
GATTGGAGAAGGTAAACTTG+AGG 0.667659 5.1:-57902045 MS.gene98037:CDS
AAGAGCTGGAGAAATTGTCG+GGG 0.668493 5.1:-57901833 MS.gene98037:CDS
TTAATCTTTCCGAAAACCGG+GGG 0.672825 5.1:+57900261 None:intergenic
ACCGTCATGAAACTGGATGG+AGG 0.674066 5.1:-57902832 MS.gene98037:CDS
TTTAATCTTTCCGAAAACCG+GGG 0.679300 5.1:+57900260 None:intergenic
AGTGAGGAGGAAATGAACAA+TGG 0.681817 5.1:-57900585 MS.gene98037:CDS
TATGGAATTGAGACTTACAT+GGG 0.685466 5.1:-57900469 MS.gene98037:CDS
AAGCTGGGAGGGCTTAACAC+AGG 0.686823 5.1:+57902615 None:intergenic
TTTACCTTCTCCAATCTCAG+AGG 0.691488 5.1:+57902052 None:intergenic
GAATCACCACAAAACATCCG+AGG 0.699635 5.1:-57899377 MS.gene98037:CDS
TCAATCAATGAAAGGTAACG+GGG 0.707345 5.1:-57900682 MS.gene98037:CDS
CCTTACCAGACAAAGCTGGG+AGG 0.709735 5.1:+57902603 None:intergenic
GATGAGGGAAGCCTAAATGG+AGG 0.710836 5.1:-57899111 MS.gene98037:CDS
AGAGCTGGAGAAATTGTCGG+GGG 0.721199 5.1:-57901832 MS.gene98037:CDS
GCTCCCAAAAGCGTGTGCTG+AGG 0.736724 5.1:-57901357 MS.gene98037:intron
TTGATACTATACATCCACTG+TGG 0.738079 5.1:+57902683 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAATATATTTCAATATCAA+AGG + chr5.1:57900336-57900355 None:intergenic 10.0%
!!! ACATATATCTAAATATTTTT+GGG - chr5.1:57903353-57903372 MS.gene98037:intron 10.0%
!!! GTTTTTTATTTATTTCATTT+AGG - chr5.1:57902775-57902794 MS.gene98037:intron 10.0%
!!! TACATATATCTAAATATTTT+TGG - chr5.1:57903352-57903371 MS.gene98037:intron 10.0%
!! AAATCCCAAAATTATTAATT+TGG + chr5.1:57899232-57899251 None:intergenic 15.0%
!! AGAATCAAATAACAAAATTT+CGG + chr5.1:57900522-57900541 None:intergenic 15.0%
!! ATTATTCTTATTATGTACTA+TGG - chr5.1:57903115-57903134 MS.gene98037:intron 15.0%
!!! AATGATATATTTTGGATTTT+TGG - chr5.1:57902718-57902737 MS.gene98037:intron 15.0%
!!! ATTTCACAATGTTATAATTT+TGG - chr5.1:57899177-57899196 MS.gene98037:CDS 15.0%
!!! CAATTTTTTTTTAGAAAACT+CGG + chr5.1:57899894-57899913 None:intergenic 15.0%
!!! TATGATTAATTTGATTGTTT+TGG + chr5.1:57903874-57903893 None:intergenic 15.0%
!!! TGATCCAAATTAATAATTTT+GGG - chr5.1:57899225-57899244 MS.gene98037:CDS 15.0%
!!! TTGATCCAAATTAATAATTT+TGG - chr5.1:57899224-57899243 MS.gene98037:CDS 15.0%
!!! TTTCACAATGTTATAATTTT+GGG - chr5.1:57899178-57899197 MS.gene98037:CDS 15.0%
!! AAACTGAGATAATAATGTTA+AGG + chr5.1:57901612-57901631 None:intergenic 20.0%
!! AAATCAAAATATGAAATGCT+CGG - chr5.1:57899438-57899457 MS.gene98037:CDS 20.0%
!! AACTGAGATAATAATGTTAA+GGG + chr5.1:57901611-57901630 None:intergenic 20.0%
!! AATACAACTTTAAATATGAG+TGG + chr5.1:57899409-57899428 None:intergenic 20.0%
!! ATAAATAAAAAACATAAGCC+AGG + chr5.1:57902768-57902787 None:intergenic 20.0%
!! ATAATAGACCAAAATACTAA+GGG + chr5.1:57901547-57901566 None:intergenic 20.0%
!! ATGAATAATTATTGTAAGGA+AGG - chr5.1:57899020-57899039 MS.gene98037:CDS 20.0%
!! GAATCAAATAACAAAATTTC+GGG + chr5.1:57900521-57900540 None:intergenic 20.0%
!! GTGTATGAATAATTATTGTA+AGG - chr5.1:57899016-57899035 MS.gene98037:CDS 20.0%
!! TAAAAAAAAAAAACGATAGC+AGG + chr5.1:57903224-57903243 None:intergenic 20.0%
!! TAATTAAGTACTAGTTATCA+AGG + chr5.1:57903492-57903511 None:intergenic 20.0%
!! TATAATAGACCAAAATACTA+AGG + chr5.1:57901548-57901567 None:intergenic 20.0%
!! TCTTAAGTATAAGTAAAAGT+TGG + chr5.1:57899574-57899593 None:intergenic 20.0%
!! TTCAAATCAAACATATGTTT+AGG - chr5.1:57900061-57900080 MS.gene98037:intron 20.0%
!!! AAACTGTGAATGATATATTT+TGG - chr5.1:57902710-57902729 MS.gene98037:intron 20.0%
!!! AATTTCTATTTGGTTTTAGA+AGG - chr5.1:57902120-57902139 MS.gene98037:CDS 20.0%
!!! ACTTTTACTTATACTTAAGA+CGG - chr5.1:57899574-57899593 MS.gene98037:intron 20.0%
!!! ATTAATAATTTTGGGATTTG+AGG - chr5.1:57899233-57899252 MS.gene98037:CDS 20.0%
!!! CGAGTTTTCTAAAAAAAAAT+TGG - chr5.1:57899892-57899911 MS.gene98037:CDS 20.0%
!!! TATCATTGAATGTTTTTCTA+TGG - chr5.1:57900583-57900602 MS.gene98037:CDS 20.0%
!!! TTCACAATGTTATAATTTTG+GGG - chr5.1:57899179-57899198 MS.gene98037:CDS 20.0%
! AATCTTCTTCAATCAATGAA+AGG - chr5.1:57902371-57902390 MS.gene98037:CDS 25.0%
! AATGTAGTAAATGCTGTTAA+AGG + chr5.1:57900888-57900907 None:intergenic 25.0%
! ACATTAAGATAATCATTTGC+AGG + chr5.1:57899676-57899695 None:intergenic 25.0%
! AGGATACTGAAAATCATAAT+AGG - chr5.1:57900610-57900629 MS.gene98037:CDS 25.0%
! ATGAGTCTTGAAACAAATAA+AGG - chr5.1:57901116-57901135 MS.gene98037:CDS 25.0%
! ATTAATCATATAGATGAAGC+AGG - chr5.1:57903884-57903903 MS.gene98037:intron 25.0%
! ATTATATCTTGGAACTGTAA+AGG + chr5.1:57901876-57901895 None:intergenic 25.0%
! CAAATTGGTATATGAATTTC+AGG - chr5.1:57901815-57901834 MS.gene98037:intron 25.0%
! CATCATATTCTTCAAATACT+TGG + chr5.1:57902682-57902701 None:intergenic 25.0%
! CTATCATTGTACATATTTGA+AGG + chr5.1:57902912-57902931 None:intergenic 25.0%
! GAATCTGTAAATTTATGTCT+CGG + chr5.1:57900559-57900578 None:intergenic 25.0%
! TACATCCTACTGTTATTATT+AGG + chr5.1:57901933-57901952 None:intergenic 25.0%
! TAGTCCTATTTCAAATGTTT+GGG - chr5.1:57903028-57903047 MS.gene98037:intron 25.0%
! TCCTCAATTGTTACAATATT+TGG + chr5.1:57902659-57902678 None:intergenic 25.0%
! TTAAAGGGTTATCTTTAAAC+AGG - chr5.1:57902253-57902272 MS.gene98037:CDS 25.0%
! TTACAGTTCCAAGATATAAT+GGG - chr5.1:57901876-57901895 MS.gene98037:CDS 25.0%
! TTAGTCCTATTTCAAATGTT+TGG - chr5.1:57903027-57903046 MS.gene98037:intron 25.0%
! TTGTTACAGTAACATTTAGT+CGG - chr5.1:57902081-57902100 MS.gene98037:CDS 25.0%
! TTTAACAGCATTTACTACAT+TGG - chr5.1:57900887-57900906 MS.gene98037:intron 25.0%
! TTTACAGTTCCAAGATATAA+TGG - chr5.1:57901875-57901894 MS.gene98037:CDS 25.0%
! TTTATTTGTTTCAAGACTCA+TGG + chr5.1:57901117-57901136 None:intergenic 25.0%
!! ATTATGTACTATGGTTTTTC+AGG - chr5.1:57903124-57903143 MS.gene98037:intron 25.0%
!! CTTTTACTTATACTTAAGAC+GGG - chr5.1:57899575-57899594 MS.gene98037:intron 25.0%
!!! CTTTTGCTTATATTTAAGAC+CGG + chr5.1:57899504-57899523 None:intergenic 25.0%
!!! TCAAAGAAAGTTGATGTATT+TGG + chr5.1:57899551-57899570 None:intergenic 25.0%
AAAACCCCAGAAAAGAAAAA+GGG + chr5.1:57899316-57899335 None:intergenic 30.0%
AAATGTAGACTGAACAGAAA+GGG + chr5.1:57899627-57899646 None:intergenic 30.0%
AAATTAAGAATCCGTAAGCA+GGG + chr5.1:57900152-57900171 None:intergenic 30.0%
AAGTCCATGTTGCAATTTAT+AGG - chr5.1:57900016-57900035 MS.gene98037:intron 30.0%
AATAAGCTGAAAACAACTCA+TGG - chr5.1:57901430-57901449 MS.gene98037:CDS 30.0%
ACAGAAATGTGAATTCTCAT+AGG + chr5.1:57900199-57900218 None:intergenic 30.0%
ACTTAACACCTTCTCAAATA+AGG + chr5.1:57901652-57901671 None:intergenic 30.0%
AGTCCATGTTGCAATTTATA+GGG - chr5.1:57900017-57900036 MS.gene98037:intron 30.0%
AGTCTTCAAAGAACCAAAAA+AGG - chr5.1:57903192-57903211 MS.gene98037:intron 30.0%
AGTTTATCGAAACAGCTTAA+CGG + chr5.1:57901461-57901480 None:intergenic 30.0%
ATCTTCAAATTTCTGTTACC+TGG - chr5.1:57902747-57902766 MS.gene98037:intron 30.0%
CAAACAGAACCTGAATATAA+AGG + chr5.1:57901260-57901279 None:intergenic 30.0%
CCTGGGAAAAAATTTCTATT+TGG - chr5.1:57902110-57902129 MS.gene98037:CDS 30.0%
CTTAACACCTTCTCAAATAA+GGG + chr5.1:57901651-57901670 None:intergenic 30.0%
CTTATTTCGATAAGTTCTCT+AGG + chr5.1:57901416-57901435 None:intergenic 30.0%
CTTCAATCAATGAAAGGTAA+CGG - chr5.1:57902377-57902396 MS.gene98037:CDS 30.0%
GAATCAACTTTGCATGTTTA+AGG + chr5.1:57901577-57901596 None:intergenic 30.0%
GAATTGACACTTAACTTCTT+CGG + chr5.1:57900820-57900839 None:intergenic 30.0%
GCCAAATATTGTAACAATTG+AGG - chr5.1:57902655-57902674 MS.gene98037:CDS 30.0%
GGAAAATAATAGACCAACAT+GGG - chr5.1:57900908-57900927 MS.gene98037:intron 30.0%
TAAATTAAGAATCCGTAAGC+AGG + chr5.1:57900153-57900172 None:intergenic 30.0%
TAACAGTAGGATGTATGTAT+TGG - chr5.1:57901938-57901957 MS.gene98037:CDS 30.0%
TAAGTGTCAATTCAACAAAG+AGG - chr5.1:57900827-57900846 MS.gene98037:intron 30.0%
TACAGTTCCAAGATATAATG+GGG - chr5.1:57901877-57901896 MS.gene98037:CDS 30.0%
TATGGAATTGAGACTTACAT+GGG - chr5.1:57902592-57902611 MS.gene98037:intron 30.0%
TCTACATCTTCTCATTCTAA+CGG - chr5.1:57902281-57902300 MS.gene98037:CDS 30.0%
TCTGAATGTCCATTTAAGTA+AGG + chr5.1:57902407-57902426 None:intergenic 30.0%
TCTGTAGTAGTCATGTTTAT+CGG - chr5.1:57903255-57903274 MS.gene98037:intron 30.0%
TGGAAAATAATAGACCAACA+TGG - chr5.1:57900907-57900926 MS.gene98037:intron 30.0%
TGGAAACTGATACATATAAC+AGG - chr5.1:57904044-57904063 MS.gene98037:CDS 30.0%
TGTTCTTATGAGTTCATGTT+GGG - chr5.1:57899266-57899285 MS.gene98037:CDS 30.0%
TTACCCTATAAATTGCAACA+TGG + chr5.1:57900023-57900042 None:intergenic 30.0%
TTCAATCAATGAAAGGTAAC+GGG - chr5.1:57902378-57902397 MS.gene98037:CDS 30.0%
TTTGGCCTAATAATAACAGT+AGG - chr5.1:57901925-57901944 MS.gene98037:CDS 30.0%
! ATAAAGGATCCAAACTTTTC+TGG - chr5.1:57902311-57902330 MS.gene98037:CDS 30.0%
! CATCTTCTCATTTTCAACAA+GGG - chr5.1:57901045-57901064 MS.gene98037:intron 30.0%
! CTTTATATTCAGGTTCTGTT+TGG - chr5.1:57901258-57901277 MS.gene98037:intron 30.0%
! GAATGTTTTTCTATGGATAC+AGG - chr5.1:57900590-57900609 MS.gene98037:CDS 30.0%
! TGATCATCATTTTCATCCAA+AGG + chr5.1:57899384-57899403 None:intergenic 30.0%
! TTCAACCCTTTTTCTTTTCT+GGG - chr5.1:57899308-57899327 MS.gene98037:CDS 30.0%
! TTTCAACCCTTTTTCTTTTC+TGG - chr5.1:57899307-57899326 MS.gene98037:CDS 30.0%
! TTTTAATCTTTCCGAAAACC+GGG + chr5.1:57902805-57902824 None:intergenic 30.0%
!! AGTGCTTTGGAAATAACTTT+AGG + chr5.1:57903461-57903480 None:intergenic 30.0%
!! GTTTTAATCTTTCCGAAAAC+CGG + chr5.1:57902806-57902825 None:intergenic 30.0%
!!! CCAAATAGAAATTTTTTCCC+AGG + chr5.1:57902113-57902132 None:intergenic 30.0%
!!! CTAAATATTTTTGGGATGTG+CGG - chr5.1:57903361-57903380 MS.gene98037:intron 30.0%
AACAATGCAAGTGATCGATA+TGG - chr5.1:57900651-57900670 MS.gene98037:CDS 35.0%
AACTTATACCACCGAAATCA+AGG + chr5.1:57900420-57900439 None:intergenic 35.0%
AATTAAGAATCCGTAAGCAG+GGG + chr5.1:57900151-57900170 None:intergenic 35.0%
ACAAGATACAAGTCACTCAA+CGG - chr5.1:57903928-57903947 MS.gene98037:intron 35.0%
AGCAAGCACAGAATTTAACA+AGG + chr5.1:57903410-57903429 None:intergenic 35.0%
AGTAGGATGTATGTATTGGA+GGG - chr5.1:57901942-57901961 MS.gene98037:CDS 35.0%
AGTTTCCATTTCTTCATGAC+TGG + chr5.1:57904032-57904051 None:intergenic 35.0%
ATATTGGGACGAAAACTAAG+AGG - chr5.1:57902546-57902565 MS.gene98037:intron 35.0%
ATCACCAGCATTTAATTGCA+AGG + chr5.1:57901988-57902007 None:intergenic 35.0%
ATTCAAGAACACAAGCTTTC+AGG - chr5.1:57903590-57903609 MS.gene98037:intron 35.0%
ATTGGAGAAGGTAAACTTGA+GGG - chr5.1:57901017-57901036 MS.gene98037:intron 35.0%
CAAATGTAGACTGAACAGAA+AGG + chr5.1:57899628-57899647 None:intergenic 35.0%
CAACTGCTTCAGATTCTAAT+TGG + chr5.1:57903847-57903866 None:intergenic 35.0%
CAATTAAATGCTGGTGATAC+TGG - chr5.1:57901990-57902009 MS.gene98037:CDS 35.0%
CAATTCTACACAACTGCATA+AGG + chr5.1:57900725-57900744 None:intergenic 35.0%
CCTAATGAGTTCAAATTCTG+AGG + chr5.1:57902341-57902360 None:intergenic 35.0%
CCTCAGAATTTGAACTCATT+AGG - chr5.1:57902338-57902357 MS.gene98037:CDS 35.0%
CGATATGGTGAACATATTGA+TGG - chr5.1:57900666-57900685 MS.gene98037:CDS 35.0%
CTATGGAATTGAGACTTACA+TGG - chr5.1:57902591-57902610 MS.gene98037:intron 35.0%
CTTATGCAGTTGTGTAGAAT+TGG - chr5.1:57900723-57900742 MS.gene98037:CDS 35.0%
GAAAACCCCAGAAAAGAAAA+AGG + chr5.1:57899317-57899336 None:intergenic 35.0%
GCAAACATCTCAGTCTATAT+TGG - chr5.1:57901067-57901086 MS.gene98037:intron 35.0%
GGGTACATTACTTAAACTGA+TGG + chr5.1:57899607-57899626 None:intergenic 35.0%
GGTATATAATCTTACCCTGA+TGG + chr5.1:57902839-57902858 None:intergenic 35.0%
GTGTTCTTATGAGTTCATGT+TGG - chr5.1:57899265-57899284 MS.gene98037:CDS 35.0%
GTTAGAATGAGAAGATGTAG+AGG + chr5.1:57902282-57902301 None:intergenic 35.0%
GTTTATCGGAATAGAGTTAG+AGG - chr5.1:57903269-57903288 MS.gene98037:intron 35.0%
GTTTCCATTTCTTCATGACT+GGG + chr5.1:57904031-57904050 None:intergenic 35.0%
TACACATTTCCCTGTAATTG+CGG - chr5.1:57901783-57901802 MS.gene98037:intron 35.0%
TATCAAAGGAGAGAAAGACA+AGG + chr5.1:57900322-57900341 None:intergenic 35.0%
TATCTTAATGTGTACCCACT+TGG - chr5.1:57899685-57899704 MS.gene98037:intron 35.0%
TATTGTAAGGAAGGTTCAAC+TGG - chr5.1:57899029-57899048 MS.gene98037:CDS 35.0%
TCAATCAATGAAAGGTAACG+GGG - chr5.1:57902379-57902398 MS.gene98037:CDS 35.0%
TGAAACGCTTTCACTAAAGA+TGG - chr5.1:57900947-57900966 MS.gene98037:CDS 35.0%
TGAAGACTTTCTTGTTCCTT+TGG + chr5.1:57903180-57903199 None:intergenic 35.0%
TTATTTCATTTAGGAACCCC+CGG - chr5.1:57902784-57902803 MS.gene98037:intron 35.0%
TTCTAACGGCATTTCGATAA+AGG - chr5.1:57902295-57902314 MS.gene98037:CDS 35.0%
TTGATACTATACATCCACTG+TGG + chr5.1:57900381-57900400 None:intergenic 35.0%
TTGTGTAGAATTGGTGAAGT+CGG - chr5.1:57900732-57900751 MS.gene98037:CDS 35.0%
TTTAATCTTTCCGAAAACCG+GGG + chr5.1:57902804-57902823 None:intergenic 35.0%
TTTATGTCTCGGTATCACAA+TGG + chr5.1:57900548-57900567 None:intergenic 35.0%
TTTCAGTTTCAGAGAAGAAG+AGG - chr5.1:57902516-57902535 MS.gene98037:intron 35.0%
! ACATATTGATGGTAGACTAC+TGG - chr5.1:57900677-57900696 MS.gene98037:CDS 35.0%
! ATACTTTTAGTCTCCCATGT+TGG + chr5.1:57900924-57900943 None:intergenic 35.0%
! ATCAGTTACTTTCTCGATAC+TGG - chr5.1:57901189-57901208 MS.gene98037:CDS 35.0%
! ATTGACTTCTGTTGTTACAC+AGG - chr5.1:57902145-57902164 MS.gene98037:CDS 35.0%
! CACTTAACTTCTTCGGTTTT+TGG + chr5.1:57900813-57900832 None:intergenic 35.0%
! GCATCCCAAACATTTGAAAT+AGG + chr5.1:57903035-57903054 None:intergenic 35.0%
! GCATCTTCTCATTTTCAACA+AGG - chr5.1:57901044-57901063 MS.gene98037:intron 35.0%
! GGACTTTTCAGTTCAGATTT+TGG - chr5.1:57901907-57901926 MS.gene98037:CDS 35.0%
! TCAACCCTTTTTCTTTTCTG+GGG - chr5.1:57899309-57899328 MS.gene98037:CDS 35.0%
! TCGATCACTTGCATTGTTTT+TGG + chr5.1:57900649-57900668 None:intergenic 35.0%
! TTTTCTTCTTACGCATCGTA+AGG + chr5.1:57903823-57903842 None:intergenic 35.0%
!! ACAATATTTGGCTTGACACT+AGG + chr5.1:57902647-57902666 None:intergenic 35.0%
!!! CATTGTTTTTGGTCGATTGA+GGG + chr5.1:57900638-57900657 None:intergenic 35.0%
!!! CTTGGTTTTGTTAGTAAGTC+AGG - chr5.1:57899981-57900000 MS.gene98037:intron 35.0%
!!! TCGCTTCTTTTTAGAATCTG+CGG + chr5.1:57903546-57903565 None:intergenic 35.0%
!!! TTTCTTTTCTGGGGTTTTCA+GGG - chr5.1:57899318-57899337 MS.gene98037:CDS 35.0%
!!! TTTTCTTTTCTGGGGTTTTC+AGG - chr5.1:57899317-57899336 MS.gene98037:CDS 35.0%
AAATTCCACCGTCATGAAAC+TGG - chr5.1:57900222-57900241 MS.gene98037:intron 40.0%
AACGGGGAACCTTACTTAAA+TGG - chr5.1:57902395-57902414 MS.gene98037:CDS 40.0%
AAGAAATTCTGTTCTGCCGT+TGG - chr5.1:57900986-57901005 MS.gene98037:intron 40.0%
AAGAAGAGGTCTCGCAATAT+TGG - chr5.1:57902530-57902549 MS.gene98037:intron 40.0%
AAGGATTACTGATCAAGAGC+TGG - chr5.1:57901214-57901233 MS.gene98037:CDS 40.0%
AATTGCAAGGACTGTATGCA+AGG + chr5.1:57901975-57901994 None:intergenic 40.0%
ACATTCAGAACATCTGCGTT+TGG - chr5.1:57902418-57902437 MS.gene98037:CDS 40.0%
ACATTTAGTCGGATAGATCC+TGG - chr5.1:57902092-57902111 MS.gene98037:CDS 40.0%
ACGCATAAATGCACAGTTAC+AGG + chr5.1:57899348-57899367 None:intergenic 40.0%
ACTATACATCCACTGTGGAT+AGG + chr5.1:57900376-57900395 None:intergenic 40.0%
ACTCGTTCCCCATTATATCT+TGG + chr5.1:57901887-57901906 None:intergenic 40.0%
AGAAACCTCAGAACAAAAGC+AGG + chr5.1:57899963-57899982 None:intergenic 40.0%
AGAAGAGGTCTCGCAATATT+GGG - chr5.1:57902531-57902550 MS.gene98037:intron 40.0%
AGCTCTTGATCAGTAATCCT+TGG + chr5.1:57901215-57901234 None:intergenic 40.0%
AGTCCTGCTCTGACTTTAAA+TGG - chr5.1:57899808-57899827 MS.gene98037:intron 40.0%
AGTGAGGAGGAAATGAACAA+TGG - chr5.1:57902476-57902495 MS.gene98037:intron 40.0%
ATAATCTTACCCTGATGGAG+AGG + chr5.1:57902834-57902853 None:intergenic 40.0%
ATAGATGAAGCAGGTACTAG+TGG - chr5.1:57903893-57903912 MS.gene98037:intron 40.0%
ATTGCAAGGACTGTATGCAA+GGG + chr5.1:57901974-57901993 None:intergenic 40.0%
ATTGCCTAAAACTGCTGCAT+TGG + chr5.1:57903630-57903649 None:intergenic 40.0%
CAACTGGTGAATGGAAGAAA+GGG - chr5.1:57899045-57899064 MS.gene98037:CDS 40.0%
CAGTAGGATGTATGTATTGG+AGG - chr5.1:57901941-57901960 MS.gene98037:CDS 40.0%
CAGTCCTTGCAATTAAATGC+TGG - chr5.1:57901981-57902000 MS.gene98037:CDS 40.0%
CATTCAGAACATCTGCGTTT+GGG - chr5.1:57902419-57902438 MS.gene98037:CDS 40.0%
CATTCATAGCGAAGATGCTA+TGG - chr5.1:57902574-57902593 MS.gene98037:intron 40.0%
CATTTAGTCGGATAGATCCT+GGG - chr5.1:57902093-57902112 MS.gene98037:CDS 40.0%
CCTTCTGATTGCAAAATACG+AGG + chr5.1:57901849-57901868 None:intergenic 40.0%
CTTACTTTGTGCTCCTCTAA+AGG - chr5.1:57899734-57899753 MS.gene98037:intron 40.0%
CTTTCACTAAAGATGGCTCT+AGG - chr5.1:57900954-57900973 MS.gene98037:CDS 40.0%
GATGGCATGGTTTCATGTAT+TGG - chr5.1:57900786-57900805 MS.gene98037:CDS 40.0%
GATTGGAGAAGGTAAACTTG+AGG - chr5.1:57901016-57901035 MS.gene98037:intron 40.0%
GCAGACAGGTCAACATTATT+CGG - chr5.1:57903053-57903072 MS.gene98037:intron 40.0%
GCTTAAAACTGCACATAGTG+AGG - chr5.1:57902460-57902479 MS.gene98037:intron 40.0%
GTCCTGCTCTGACTTTAAAT+GGG - chr5.1:57899809-57899828 MS.gene98037:intron 40.0%
TAAAACTGCACATAGTGAGG+AGG - chr5.1:57902463-57902482 MS.gene98037:intron 40.0%
TAACCTTACCAGACAAAGCT+GGG + chr5.1:57900464-57900483 None:intergenic 40.0%
TCAACTGGTGAATGGAAGAA+AGG - chr5.1:57899044-57899063 MS.gene98037:CDS 40.0%
TCAAGAGCTGGAGAAATTGT+CGG - chr5.1:57901226-57901245 MS.gene98037:CDS 40.0%
TCATACATGCCGCAATTACA+GGG + chr5.1:57901795-57901814 None:intergenic 40.0%
TCATCCCAGTCATGAAGAAA+TGG - chr5.1:57904024-57904043 MS.gene98037:CDS 40.0%
TCGTTCGAGTACCTTGATTT+CGG - chr5.1:57900406-57900425 MS.gene98037:CDS 40.0%
TGTCAACGAATCTCAGTTCT+TGG + chr5.1:57899471-57899490 None:intergenic 40.0%
TTAACCTTACCAGACAAAGC+TGG + chr5.1:57900465-57900484 None:intergenic 40.0%
TTAATCTTTCCGAAAACCGG+GGG + chr5.1:57902803-57902822 None:intergenic 40.0%
TTGCGGCATGTATGACAAAT+TGG - chr5.1:57901800-57901819 MS.gene98037:intron 40.0%
TTGGCTCAACTATCAAAGAC+TGG - chr5.1:57901086-57901105 MS.gene98037:CDS 40.0%
TTTACCTTCTCCAATCTCAG+AGG + chr5.1:57901012-57901031 None:intergenic 40.0%
! AAGATATAATGGGGAACGAG+TGG - chr5.1:57901886-57901905 MS.gene98037:CDS 40.0%
! ATTCCCTCTGATGCCAATTT+TGG - chr5.1:57899768-57899787 MS.gene98037:intron 40.0%
! CAAAATACTAAGGGCTTGCT+AGG + chr5.1:57901538-57901557 None:intergenic 40.0%
! CCTCGTATTTTGCAATCAGA+AGG - chr5.1:57901846-57901865 MS.gene98037:CDS 40.0%
! CTAGCAAGCCCTTAGTATTT+TGG - chr5.1:57901536-57901555 MS.gene98037:intron 40.0%
! CTGATAGTGCTAAATGTGCA+AGG + chr5.1:57902860-57902879 None:intergenic 40.0%
! TATTGATGGTAGACTACTGG+TGG - chr5.1:57900680-57900699 MS.gene98037:CDS 40.0%
! TGTAGTGCCCTTATTTGAGA+AGG - chr5.1:57901641-57901660 MS.gene98037:intron 40.0%
!! ATATTTGGCTTGACACTAGG+CGG + chr5.1:57902644-57902663 None:intergenic 40.0%
!! CTTTACCTGCTTTTGTTCTG+AGG - chr5.1:57899955-57899974 MS.gene98037:intron 40.0%
!! GGGGAGTATCCTTTATATTC+AGG - chr5.1:57901248-57901267 MS.gene98037:intron 40.0%
!!! CTATGGTTTTTCAGGTCTTC+AGG - chr5.1:57903132-57903151 MS.gene98037:intron 40.0%
!!! GCATTGTTTTTGGTCGATTG+AGG + chr5.1:57900639-57900658 None:intergenic 40.0%
!!! GCTTTTGTTCTGAGGTTTCT+TGG - chr5.1:57899963-57899982 MS.gene98037:intron 40.0%
!!! TAGCAGGATCGTACCTTTTT+TGG + chr5.1:57903208-57903227 None:intergenic 40.0%
!!! TATTTTTGGGATGTGCGGAT+TGG - chr5.1:57903366-57903385 MS.gene98037:intron 40.0%
AAAGGGTGGTCTTTGATCTC+TGG - chr5.1:57899062-57899081 MS.gene98037:CDS 45.0%
AAGAGCTGGAGAAATTGTCG+GGG - chr5.1:57901228-57901247 MS.gene98037:intron 45.0%
ACAAGCTCAAAGAGATGGCA+TGG - chr5.1:57900773-57900792 MS.gene98037:CDS 45.0%
ACAAGTCACTCAACGGATGA+GGG - chr5.1:57903935-57903954 MS.gene98037:intron 45.0%
ACTGAAACCAGTTGCTGCAA+TGG + chr5.1:57902503-57902522 None:intergenic 45.0%
AGGAAGGTTCAACTGGTGAA+TGG - chr5.1:57899036-57899055 MS.gene98037:CDS 45.0%
AGTCAGAGCAGGACTTTGTA+TGG + chr5.1:57899803-57899822 None:intergenic 45.0%
ATCAAACCCGAGACCTTTAG+AGG + chr5.1:57899750-57899769 None:intergenic 45.0%
ATGTCTCGGTATCACAATGG+CGG + chr5.1:57900545-57900564 None:intergenic 45.0%
ATTCAACCACCAAGTGGACA+GGG - chr5.1:57903737-57903756 MS.gene98037:intron 45.0%
CAAGAGCTGGAGAAATTGTC+GGG - chr5.1:57901227-57901246 MS.gene98037:CDS 45.0%
CAAGGACTACTTCAGTGCTT+TGG + chr5.1:57903474-57903493 None:intergenic 45.0%
CAATGACCGACTAATCCTAG+GGG + chr5.1:57899863-57899882 None:intergenic 45.0%
CCAAACTCTGCAACAAATGC+GGG - chr5.1:57899093-57899112 MS.gene98037:CDS 45.0%
CCAATGACCGACTAATCCTA+GGG + chr5.1:57899864-57899883 None:intergenic 45.0%
CCACCAAAATTGGCATCAGA+GGG + chr5.1:57899774-57899793 None:intergenic 45.0%
CGTGTTTCAATCTCAGCCTT+TGG - chr5.1:57899365-57899384 MS.gene98037:CDS 45.0%
CTCTTTGAGCTTGTGACCAA+CGG + chr5.1:57900767-57900786 None:intergenic 45.0%
GAAATGCAGCAATTGCAGCA+AGG - chr5.1:57900251-57900270 MS.gene98037:CDS 45.0%
GAACATCTGCGTTTGGGTAA+TGG - chr5.1:57902425-57902444 MS.gene98037:CDS 45.0%
GAATCACCACAAAACATCCG+AGG - chr5.1:57903684-57903703 MS.gene98037:intron 45.0%
GCCAAACTCTGCAACAAATG+CGG - chr5.1:57899092-57899111 MS.gene98037:CDS 45.0%
GTCATACATGCCGCAATTAC+AGG + chr5.1:57901796-57901815 None:intergenic 45.0%
TACAAGTCACTCAACGGATG+AGG - chr5.1:57903934-57903953 MS.gene98037:intron 45.0%
TACTTTCTCGATACTGGCCA+AGG - chr5.1:57901195-57901214 MS.gene98037:CDS 45.0%
TCCTCCATCCAGTTTCATGA+CGG + chr5.1:57900233-57900252 None:intergenic 45.0%
TGAGGTGCACCAGAAAAGTT+TGG + chr5.1:57902323-57902342 None:intergenic 45.0%
TGGTCACAAGCTCAAAGAGA+TGG - chr5.1:57900768-57900787 MS.gene98037:CDS 45.0%
TTCGAGTACCTTGATTTCGG+TGG - chr5.1:57900409-57900428 MS.gene98037:CDS 45.0%
TTGCAAGGACTGTATGCAAG+GGG + chr5.1:57901973-57901992 None:intergenic 45.0%
! ATACCTCAGCACACGCTTTT+GGG + chr5.1:57901710-57901729 None:intergenic 45.0%
! ATTGGACCCCTAGGATTAGT+CGG - chr5.1:57899854-57899873 MS.gene98037:intron 45.0%
! ATTTAGGAACCCCCGGTTTT+CGG - chr5.1:57902791-57902810 MS.gene98037:intron 45.0%
! CAAATGTTTGGGATGCAGAC+AGG - chr5.1:57903039-57903058 MS.gene98037:intron 45.0%
! CATTGACTATCCCCTGCTTA+CGG - chr5.1:57900138-57900157 MS.gene98037:intron 45.0%
! CTTGCCAATGCAGCAGTTTT+AGG - chr5.1:57903623-57903642 MS.gene98037:intron 45.0%
! TATACCTCAGCACACGCTTT+TGG + chr5.1:57901711-57901730 None:intergenic 45.0%
! TCATGTTTTCCCTGTCCACT+TGG + chr5.1:57903749-57903768 None:intergenic 45.0%
! TTGTGCTCCTCTAAAGGTCT+CGG - chr5.1:57899740-57899759 MS.gene98037:intron 45.0%
! TTTTTCCCCTTCACATCAGC+AGG + chr5.1:57901170-57901189 None:intergenic 45.0%
! TTTTTGCAGCCTATCCACAG+TGG - chr5.1:57900364-57900383 MS.gene98037:intron 45.0%
!! ATGGACTAGCCCACCAAAAT+TGG + chr5.1:57899784-57899803 None:intergenic 45.0%
!! CCTAGGATTAGTCGGTCATT+GGG - chr5.1:57899862-57899881 MS.gene98037:intron 45.0%
!! CCTCTGATGCCAATTTTGGT+GGG - chr5.1:57899772-57899791 MS.gene98037:intron 45.0%
!! TGGGTAATGGAACTGCTGAT+TGG - chr5.1:57902438-57902457 MS.gene98037:CDS 45.0%
!! AAATATCTTATAATATATAT+TGG - chr5.1:57902945-57902964 MS.gene98037:intron 5.0%
!!! ATTTTTGAAAATATAATTAA+AGG - chr5.1:57902237-57902256 MS.gene98037:CDS 5.0%
!!! TAATTAATTCTTATATTTTA+TGG - chr5.1:57903506-57903525 MS.gene98037:intron 5.0%
!!! TTTTTGAAAATATAATTAAA+GGG - chr5.1:57902238-57902257 MS.gene98037:CDS 5.0%
AAAACCAGTGCCTCTCCATC+AGG - chr5.1:57902821-57902840 MS.gene98037:CDS 50.0%
AAACCAGTGCCTCTCCATCA+GGG - chr5.1:57902822-57902841 MS.gene98037:CDS 50.0%
AAGTCGGTGAATCAAGCCGT+TGG - chr5.1:57900748-57900767 MS.gene98037:CDS 50.0%
ACCGTCATGAAACTGGATGG+AGG - chr5.1:57900229-57900248 MS.gene98037:intron 50.0%
ACGGATGAGGGAAGCCTAAA+TGG - chr5.1:57903947-57903966 MS.gene98037:intron 50.0%
AGACTACTGGTGGAACAAGC+TGG - chr5.1:57900690-57900709 MS.gene98037:CDS 50.0%
AGAGCTGGAGAAATTGTCGG+GGG - chr5.1:57901229-57901248 MS.gene98037:intron 50.0%
ATCCCAAACCAACACCGCTA+GGG + chr5.1:57899714-57899733 None:intergenic 50.0%
CAATGGTCCATTGCAGCAAC+TGG - chr5.1:57902493-57902512 MS.gene98037:intron 50.0%
CACACGATACAAGTGCATCC+AGG + chr5.1:57903716-57903735 None:intergenic 50.0%
CATTCAACCACCAAGTGGAC+AGG - chr5.1:57903736-57903755 MS.gene98037:intron 50.0%
CCAATTCGACCTGCATCACT+CGG + chr5.1:57901675-57901694 None:intergenic 50.0%
CCCAATGACCGACTAATCCT+AGG + chr5.1:57899865-57899884 None:intergenic 50.0%
CCCACCAAAATTGGCATCAG+AGG + chr5.1:57899775-57899794 None:intergenic 50.0%
CCTAAATGGAGGTCAGCTTG+AGG - chr5.1:57903961-57903980 MS.gene98037:intron 50.0%
CCTCAAGCTGACCTCCATTT+AGG + chr5.1:57903964-57903983 None:intergenic 50.0%
CTGGTGAATGGAAGAAAGGG+TGG - chr5.1:57899048-57899067 MS.gene98037:CDS 50.0%
CTTACCAGACAAAGCTGGGA+GGG + chr5.1:57900460-57900479 None:intergenic 50.0%
GATGAAGCAGGTACTAGTGG+TGG - chr5.1:57903896-57903915 MS.gene98037:intron 50.0%
GATGAGGGAAGCCTAAATGG+AGG - chr5.1:57903950-57903969 MS.gene98037:intron 50.0%
GCATCGTAAGGCTCTTGAAC+CGG + chr5.1:57903811-57903830 None:intergenic 50.0%
GCTTAAGAGTCTCACAGGCA+AGG + chr5.1:57903787-57903806 None:intergenic 50.0%
GGTGGTCTTTGATCTCTGGT+GGG - chr5.1:57899066-57899085 MS.gene98037:CDS 50.0%
GTGTGCATTCAACCACCAAG+TGG - chr5.1:57903731-57903750 MS.gene98037:intron 50.0%
GTGTTAAGTCCGAGTGATGC+AGG - chr5.1:57901663-57901682 MS.gene98037:intron 50.0%
TCCACCGTCATGAAACTGGA+TGG - chr5.1:57900226-57900245 MS.gene98037:intron 50.0%
TCCATCCAGTTTCATGACGG+TGG + chr5.1:57900230-57900249 None:intergenic 50.0%
TCGTTGACAGCGTGATACTC+CGG - chr5.1:57899482-57899501 MS.gene98037:CDS 50.0%
TCTCCAATCTCAGAGGCCAA+CGG + chr5.1:57901005-57901024 None:intergenic 50.0%
! ACGATGCCTCGGATGTTTTG+TGG + chr5.1:57903693-57903712 None:intergenic 50.0%
! CCCGCATTTGTTGCAGAGTT+TGG + chr5.1:57899096-57899115 None:intergenic 50.0%
! CCCTCTGATGCCAATTTTGG+TGG - chr5.1:57899771-57899790 MS.gene98037:intron 50.0%
! GGCCCATTTAAAGTCAGAGC+AGG + chr5.1:57899814-57899833 None:intergenic 50.0%
! TGTGCTCCTCTAAAGGTCTC+GGG - chr5.1:57899741-57899760 MS.gene98037:intron 50.0%
! TGTTTTCCCTGTCCACTTGG+TGG + chr5.1:57903746-57903765 None:intergenic 50.0%
!! CCCTAGGATTAGTCGGTCAT+TGG - chr5.1:57899861-57899880 MS.gene98037:intron 50.0%
!! CTGCATTGGCAAGAGCATCT+AGG + chr5.1:57903616-57903635 None:intergenic 50.0%
!! TTGGCCTCTGAGATTGGAGA+AGG - chr5.1:57901005-57901024 MS.gene98037:intron 50.0%
AAGCTGGGAGGGCTTAACAC+AGG + chr5.1:57900449-57900468 None:intergenic 55.0%
AATCCCACCGTCCAATTGCG+GGG + chr5.1:57899837-57899856 None:intergenic 55.0%
AGGCAAGGCAAGTGCATGTC+GGG + chr5.1:57903772-57903791 None:intergenic 55.0%
ATCAGACCAGCTCGGTCCAA+AGG - chr5.1:57903161-57903180 MS.gene98037:intron 55.0%
CAATCCCACCGTCCAATTGC+GGG + chr5.1:57899838-57899857 None:intergenic 55.0%
CAGGCAAGGCAAGTGCATGT+CGG + chr5.1:57903773-57903792 None:intergenic 55.0%
CCAATCCCACCGTCCAATTG+CGG + chr5.1:57899839-57899858 None:intergenic 55.0%
CCGAGTGATGCAGGTCGAAT+TGG - chr5.1:57901672-57901691 MS.gene98037:intron 55.0%
CCTGTGAGACTCTTAAGCGC+CGG - chr5.1:57903789-57903808 MS.gene98037:intron 55.0%
CCTTACCAGACAAAGCTGGG+AGG + chr5.1:57900461-57900480 None:intergenic 55.0%
CTGGTGGAACAAGCTGGCAA+AGG - chr5.1:57900696-57900715 MS.gene98037:CDS 55.0%
CTTGTTCCTTTGGACCGAGC+TGG + chr5.1:57903170-57903189 None:intergenic 55.0%
GATCCCAAACCAACACCGCT+AGG + chr5.1:57899715-57899734 None:intergenic 55.0%
GGGTGGTCTTTGATCTCTGG+TGG - chr5.1:57899065-57899084 MS.gene98037:CDS 55.0%
GGTTCTGCATCAGACCAGCT+CGG - chr5.1:57903153-57903172 MS.gene98037:intron 55.0%
GGTTGTTGAGCCTAGTGCTG+CGG - chr5.1:57903982-57904001 MS.gene98037:CDS 55.0%
GTTGTTGAGCCTAGTGCTGC+GGG - chr5.1:57903983-57904002 MS.gene98037:CDS 55.0%
TACCCACTTGGTTGCCCTAG+CGG - chr5.1:57899697-57899716 MS.gene98037:intron 55.0%
TCCAATTGTCCCGCAGCACT+AGG + chr5.1:57903995-57904014 None:intergenic 55.0%
TGATCTCTCATCCACCACGC+CGG - chr5.1:57901141-57901160 MS.gene98037:CDS 55.0%
TTAAATGGGCCCCCCGCAAT+TGG - chr5.1:57899823-57899842 MS.gene98037:intron 55.0%
TTCCCCTTCACATCAGCAGG+TGG + chr5.1:57901167-57901186 None:intergenic 55.0%
! CCTCCCAGCTTTGTCTGGTA+AGG - chr5.1:57900458-57900477 MS.gene98037:CDS 55.0%
! TAAGCCCTCCCAGCTTTGTC+TGG - chr5.1:57900453-57900472 MS.gene98037:CDS 55.0%
! TTACCCTGATGGAGAGGCAC+TGG + chr5.1:57902828-57902847 None:intergenic 55.0%
!! AAACATCCGAGGCATCGTCC+TGG - chr5.1:57903695-57903714 MS.gene98037:intron 55.0%
!! TGCCCTAGCGGTGTTGGTTT+GGG - chr5.1:57899709-57899728 MS.gene98037:intron 55.0%
!! TTGCCCTAGCGGTGTTGGTT+TGG - chr5.1:57899708-57899727 MS.gene98037:intron 55.0%
!! TTTGGCTTGACACTAGGCGG+CGG + chr5.1:57902641-57902660 None:intergenic 55.0%
ACACCGCTAGGGCAACCAAG+TGG + chr5.1:57899703-57899722 None:intergenic 60.0%
ATCCCACCGTCCAATTGCGG+GGG + chr5.1:57899836-57899855 None:intergenic 60.0%
CACCGCTAGGGCAACCAAGT+GGG + chr5.1:57899702-57899721 None:intergenic 60.0%
CAGCTGACGACGACTCGTCA+GGG + chr5.1:57903664-57903683 None:intergenic 60.0%
CCGCAATTGGACGGTGGGAT+TGG - chr5.1:57899836-57899855 MS.gene98037:intron 60.0%
CCGGCGCTTAAGAGTCTCAC+AGG + chr5.1:57903792-57903811 None:intergenic 60.0%
CCTTCACATCAGCAGGTGGC+CGG + chr5.1:57901163-57901182 None:intergenic 60.0%
CGGCCACCTGCTGATGTGAA+GGG - chr5.1:57901161-57901180 MS.gene98037:CDS 60.0%
CTTGGTTGCCCTAGCGGTGT+TGG - chr5.1:57899703-57899722 MS.gene98037:intron 60.0%
GCCTAGTGCTGCGGGACAAT+TGG - chr5.1:57903991-57904010 MS.gene98037:CDS 60.0%
GGCCACCTGCTGATGTGAAG+GGG - chr5.1:57901162-57901181 MS.gene98037:CDS 60.0%
GTGCATCCAGGACGATGCCT+CGG + chr5.1:57903704-57903723 None:intergenic 60.0%
! GCTCCCAAAAGCGTGTGCTG+AGG - chr5.1:57901704-57901723 MS.gene98037:intron 60.0%
!! CTGCCGTTGGCCTCTGAGAT+TGG - chr5.1:57900999-57901018 MS.gene98037:intron 60.0%
ATGGGCCCCCCGCAATTGGA+CGG - chr5.1:57899827-57899846 MS.gene98037:intron 65.0%
CCAGCTGACGACGACTCGTC+AGG + chr5.1:57903665-57903684 None:intergenic 65.0%
CCGGCCACCTGCTGATGTGA+AGG - chr5.1:57901160-57901179 MS.gene98037:CDS 65.0%
CCTGACGAGTCGTCGTCAGC+TGG - chr5.1:57903662-57903681 MS.gene98037:intron 65.0%
GACGGTGGGATTGGACCCCT+AGG - chr5.1:57899845-57899864 MS.gene98037:intron 65.0%
TCCCACCGTCCAATTGCGGG+GGG + chr5.1:57899835-57899854 None:intergenic 65.0%
ACATCAGCAGGTGGCCGGCG+TGG + chr5.1:57901158-57901177 None:intergenic 70.0%
GCCCCCCGCAATTGGACGGT+GGG - chr5.1:57899831-57899850 MS.gene98037:intron 70.0%
GGCCCCCCGCAATTGGACGG+TGG - chr5.1:57899830-57899849 MS.gene98037:intron 75.0%
TCAGCAGGTGGCCGGCGTGG+TGG + chr5.1:57901155-57901174 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr5.1 gene 57899002 57904081 57899002 ID=MS.gene98037
chr5.1 mRNA 57899002 57904081 57899002 ID=MS.gene98037.t1;Parent=MS.gene98037
chr5.1 exon 57903969 57904081 57903969 ID=MS.gene98037.t1.exon1;Parent=MS.gene98037.t1
chr5.1 CDS 57903969 57904081 57903969 ID=cds.MS.gene98037.t1;Parent=MS.gene98037.t1
chr5.1 exon 57902811 57902892 57902811 ID=MS.gene98037.t1.exon2;Parent=MS.gene98037.t1
chr5.1 CDS 57902811 57902892 57902811 ID=cds.MS.gene98037.t1;Parent=MS.gene98037.t1
chr5.1 exon 57902609 57902710 57902609 ID=MS.gene98037.t1.exon3;Parent=MS.gene98037.t1
chr5.1 CDS 57902609 57902710 57902609 ID=cds.MS.gene98037.t1;Parent=MS.gene98037.t1
chr5.1 exon 57901831 57902471 57901831 ID=MS.gene98037.t1.exon4;Parent=MS.gene98037.t1
chr5.1 CDS 57901831 57902471 57901831 ID=cds.MS.gene98037.t1;Parent=MS.gene98037.t1
chr5.1 exon 57901358 57901454 57901358 ID=MS.gene98037.t1.exon5;Parent=MS.gene98037.t1
chr5.1 CDS 57901358 57901454 57901358 ID=cds.MS.gene98037.t1;Parent=MS.gene98037.t1
chr5.1 exon 57901072 57901246 57901072 ID=MS.gene98037.t1.exon6;Parent=MS.gene98037.t1
chr5.1 CDS 57901072 57901246 57901072 ID=cds.MS.gene98037.t1;Parent=MS.gene98037.t1
chr5.1 exon 57900917 57900993 57900917 ID=MS.gene98037.t1.exon7;Parent=MS.gene98037.t1
chr5.1 CDS 57900917 57900993 57900917 ID=cds.MS.gene98037.t1;Parent=MS.gene98037.t1
chr5.1 exon 57900383 57900808 57900383 ID=MS.gene98037.t1.exon8;Parent=MS.gene98037.t1
chr5.1 CDS 57900383 57900808 57900383 ID=cds.MS.gene98037.t1;Parent=MS.gene98037.t1
chr5.1 exon 57900240 57900286 57900240 ID=MS.gene98037.t1.exon9;Parent=MS.gene98037.t1
chr5.1 CDS 57900240 57900286 57900240 ID=cds.MS.gene98037.t1;Parent=MS.gene98037.t1
chr5.1 exon 57899870 57899937 57899870 ID=MS.gene98037.t1.exon10;Parent=MS.gene98037.t1
chr5.1 CDS 57899870 57899937 57899870 ID=cds.MS.gene98037.t1;Parent=MS.gene98037.t1
chr5.1 exon 57899002 57899534 57899002 ID=MS.gene98037.t1.exon11;Parent=MS.gene98037.t1
chr5.1 CDS 57899002 57899534 57899002 ID=cds.MS.gene98037.t1;Parent=MS.gene98037.t1
Gene Sequence

>MS.gene98037

ATGGGGGTTGAAGTGTGTATGAATAATTATTGTAAGGAAGGTTCAACTGGTGAATGGAAGAAAGGGTGGTCTTTGATCTCTGGTGGGTTTGCCAAACTCTGCAACAAATGCGGGTAAATTTCATTTCTTTAGTTTATCTCTCTTTTACTTGAGCTGAAATGTTATCAGAAATTTGATTTCACAATGTTATAATTTTGGGGTTTTGACTTTGATGTTATTGTTTTGATCCAAATTAATAATTTTGGGATTTGAGGTTGACTTGAGTGTTCTTATGAGTTCATGTTGGGTTAGTCAATAGTCAAAAGTTTCAACCCTTTTTCTTTTCTGGGGTTTTCAGGGATTTCCTGTAACTGTGCATTTATGCGTGTTTCAATCTCAGCCTTTGGATGAAAATGATGATCAGACCACTCATATTTAAAGTTGTATTTTAAAGTTGAAATCAAAATATGAAATGCTCGGTTTTCATCCAAGAACTGAGATTCGTTGACAGCGTGATACTCCGGTCTTAAATATAAGCAAAAGTTGTTCAGAAAAAGTTGATGTAGACCAAATACATCAACTTTCTTTGACCAACTTTTACTTATACTTAAGACGGGACGTAACCATCAGTTTAAGTAATGTACCCTTTCTGTTCAGTCTACATTTGTGTATTTGAACTCATGATGCTGTTTCCTGCAAATGATTATCTTAATGTGTACCCACTTGGTTGCCCTAGCGGTGTTGGTTTGGGATCTTACTTTGTGCTCCTCTAAAGGTCTCGGGTTTGATTCCCTCTGATGCCAATTTTGGTGGGCTAGTCCATACAAAGTCCTGCTCTGACTTTAAATGGGCCCCCCGCAATTGGACGGTGGGATTGGACCCCTAGGATTAGTCGGTCATTGGGATTATACCGAGTTTTCTAAAAAAAAATTGGATTAATAAAACTTGATCTTGCTGTTCTCAGTCTGATGCTACTTTACCTGCTTTTGTTCTGAGGTTTCTTGGTTTTGTTAGTAAGTCAGGTTCAGCTCTTTAAAGTCCATGTTGCAATTTATAGGGTAAAAATATATTTTTTGCTTGTTCAAATCAAACATATGTTTAGGTTTTGCTGTTAAGCAGTCTGACTGTCTAGAATTTTTTATCAGTAATGATTTATTCATTGACTATCCCCTGCTTACGGATTCTTAATTTATCACTCTTGTGTGTTTAGACTTGCCTATGAGAATTCACATTTCTGTGATAAATTCCACCGTCATGAAACTGGATGGAGGAAATGCAGCAATTGCAGCAAGGTAAAATTTATGTTTGATTTTTTGTACTATTTAAATACTCATTAAGCCTTGTCTTTCTCTCCTTTGATATTGAAATATATTATTTGATTTTTTTTTGCAGCCTATCCACAGTGGATGTATAGTATCAAAGTCTTCGTTCGAGTACCTTGATTTCGGTGGTATAAGTTGTGTTACCTGTGTTAAGCCCTCCCAGCTTTGTCTGGTAAGGTTAAGTTGAATATTCATTTCTGTATAATGATTTCGAACCCGAAATTTTGTTATTTGATTCTCCGCCATTGTGATACCGAGACATAAATTTACAGATTCATGTTATCATTGAATGTTTTTCTATGGATACAGGATACTGAAAATCATAATAGGTTCCCTCAATCGACCAAAAACAATGCAAGTGATCGATATGGTGAACATATTGATGGTAGACTACTGGTGGAACAAGCTGGCAAAGGAAACCTTATGCAGTTGTGTAGAATTGGTGAAGTCGGTGAATCAAGCCGTTGGTCACAAGCTCAAAGAGATGGCATGGTTTCATGTATTGGTCCAAAAACCGAAGAAGTTAAGTGTCAATTCAACAAAGAGGATACAAGATTTTTGAATGTAATGAAACATTCTAGTCCTTTAACAGCATTTACTACATTGGAAAATAATAGACCAACATGGGAGACTAAAAGTATAGATGAAACGCTTTCACTAAAGATGGCTCTAGGAACTTCATCAAGAAATTCTGTTCTGCCGTTGGCCTCTGAGATTGGAGAAGGTAAACTTGAGGGTAAAGCATCTTCTCATTTTCAACAAGGGCAAACATCTCAGTCTATATTGGCTCAACTATCAAAGACTGGAATTACCATGAGTCTTGAAACAAATAAAGGCATGATCTCTCATCCACCACGCCGGCCACCTGCTGATGTGAAGGGGAAAAATCAGTTACTTTCTCGATACTGGCCAAGGATTACTGATCAAGAGCTGGAGAAATTGTCGGGGGAGTATCCTTTATATTCAGGTTCTGTTTGGATAAACAACTTAATAAGCTCTTATATCATAAATACTTATGATATAAGTGCTTATGTATAAGCTGTTTTTGAAACTAAGATAAAATAAAGTCAAACTGTTTTCATTAAGCTATAAGTTGTTTTCATAAGCTATCCTAGAGAACTTATCGAAATAAGCTGAAAACAACTCATGGACATGCCGTTAAGCTGTTTCGATAAACTCTCTCAAATATTATCACGAGTACTTATGCAAATAGTAAGCTCAAATAAGTCAATCCTAGCAAGCCCTTAGTATTTTGGTCTATTATACATCTACCTTAAACATGCAAAGTTGATTCATCAACAGTTTCCCTTAACATTATTATCTCAGTTTGAAGTCTACTGTAGTGCCCTTATTTGAGAAGGTGTTAAGTCCGAGTGATGCAGGTCGAATTGGTCGTCTTGTGCTCCCAAAAGCGTGTGCTGAGGTATACTTTGATGTTTATCTTGACTCTGTCTATAGAAGATTTTTTATTTTAAAGAAATACACATTTCCCTGTAATTGCGGCATGTATGACAAATTGGTATATGAATTTCAGGCTTTTCTTCCTCGTATTTTGCAATCAGAAGGTGTTCCTTTACAGTTCCAAGATATAATGGGGAACGAGTGGACTTTTCAGTTCAGATTTTGGCCTAATAATAACAGTAGGATGTATGTATTGGAGGGTGTGACCCCTTGCATACAGTCCTTGCAATTAAATGCTGGTGATACTGGTATACGTCAATCTACATCATGATTTTGTTTCACATCTAAAGTTATCATCAATTGATATGAATTTTTTTTTGTTACAGTAACATTTAGTCGGATAGATCCTGGGAAAAAATTTCTATTTGGTTTTAGAAGGTCATTGACTTCTGTTGTTACACAGGTTATGACATGATTTTCAGTTTTACTATCTTTAGCTTCTTCAGATGATAACATGTTTATATTCTTCACTTATTTTTGAAAATATAATTAAAGGGTTATCTTTAAACAGGATGCCTCTACATCTTCTCATTCTAACGGCATTTCGATAAAGGATCCAAACTTTTCTGGTGCACCTCAGAATTTGAACTCATTAGGTAGTTTTTCTAATCTTCTTCAATCAATGAAAGGTAACGGGGAACCTTACTTAAATGGACATTCAGAACATCTGCGTTTGGGTAATGGAACTGCTGATTGGCTTAAAACTGCACATAGTGAGGAGGAAATGAACAATGGTCCATTGCAGCAACTGGTTTCAGTTTCAGAGAAGAAGAGGTCTCGCAATATTGGGACGAAAACTAAGAGGTTGCACATTCATAGCGAAGATGCTATGGAATTGAGACTTACATGGGAAGAAGCACAAGAATTTCTTTGTCCGCCGCCTAGTGTCAAGCCAAATATTGTAACAATTGAGGACCAAGTATTTGAAGAATATGATGTAAGTGAGAAACTGTGAATGATATATTTTGGATTTTTGGAGAATCATCTTCAAATTTCTGTTACCTGGCTTATGTTTTTTATTTATTTCATTTAGGAACCCCCGGTTTTCGGAAAGATTAAAACCAGTGCCTCTCCATCAGGGTAAGATTATATACCTTGCACATTTAGCACTATCAGTTTTATATGCTGTTGATCACTTATTCATGCCTTCAAATATGTACAATGATAGTCAGAAGATATGAAAATATCTTATAATATATATTGGTATTTTCATTGAGTATCTTTGAAGTAACAGTCAATATTTTTTGAACTATATTATTATCTTTAGTCCTATTTCAAATGTTTGGGATGCAGACAGGTCAACATTATTCGGTGCTTTTGAACTTCTACTGATTGAAGTGAGTATATCGTAATTATTCTTATTATGTACTATGGTTTTTCAGGTCTTCAGGTTCTGCATCAGACCAGCTCGGTCCAAAGGAACAAGAAAGTCTTCAAAGAACCAAAAAAGGTACGATCCTGCTATCGTTTTTTTTTTTTATTTATACATGCTCTGTAGTAGTCATGTTTATCGGAATAGAGTTAGAGGTTGATGCTTCAGTAAAATTGATTAAATGATCATTCTGTTTCGTGCATGTGTGAAATGTTTTACATATATCTAAATATTTTTGGGATGTGCGGATTGGTTTCATAAATGATATAATCCTTGTTAAATTCTGTGCTTGCTGTCTAATGTTCATTCATTGAATCATATTCCTAAAGTTATTTCCAAAGCACTGAAGTAGTCCTTGATAACTAGTACTTAATTAATTCTTATATTTTATGGATGTGTATGATCTTCCGCAGATTCTAAAAAGAAGCGAAAAATTGCTGAAAAGAGCAAGTCAATTCAAGAACACAAGCTTTCAGGCCTAGATGCTCTTGCCAATGCAGCAGTTTTAGGCAATAATCTTGCTGACCCTGACGAGTCGTCGTCAGCTGGAATCACCACAAAACATCCGAGGCATCGTCCTGGATGCACTTGTATCGTGTGCATTCAACCACCAAGTGGACAGGGAAAACATGACCCGACATGCACTTGCCTTGCCTGTGAGACTCTTAAGCGCCGGTTCAAGAGCCTTACGATGCGTAAGAAGAAAAACCAATTAGAATCTGAAGCAGTTGCTGACCAAAACAATCAAATTAATCATATAGATGAAGCAGGTACTAGTGGTGGTGTAACGAGACAAGATACAAGTCACTCAACGGATGAGGGAAGCCTAAATGGAGGTCAGCTTGAGGTTGTTGAGCCTAGTGCTGCGGGACAATTGGATTTGAATTCTCATCCCAGTCATGAAGAAATGGAAACTGATACATATAACAGGCCAAAGCATGACTAG
Protein sequence

>MS.gene98037.t1

MGVEVCMNNYCKEGSTGEWKKGWSLISGGFAKLCNKCGLAYENSHFCDKFHRHETGWRKCSNCSKPIHSGCIVSKSSFEYLDFGGISCVTCVKPSQLCLDTENHNRFPQSTKNNASDRYGEHIDGRLLVEQAGKGNLMQLCRIGEVGESSRWSQAQRDGMVSCIGPKTEEVKCQFNKEDTRFLNVMKHSSPLTAFTTLENNRPTWETKSIDETLSLKMALGTSSRNSVLPLASEIGEGKLEGKASSHFQQGQTSQSILAQLSKTGITMSLETNKGMISHPPRRPPADVKGKNQLLSRYWPRITDQELEKLSGDLKSTVVPLFEKVLSPSDAGRIGRLVLPKACAEAFLPRILQSEGVPLQFQDIMGNEWTFQFRFWPNNNSRMYVLEGVTPCIQSLQLNAGDTVTFSRIDPGKKFLFGFRRSLTSVVTQDASTSSHSNGISIKDPNFSGAPQNLNSLGSFSNLLQSMKGNGEPYLNGHSEHLRLGNGTADWLKTAHSEEEMNNGPLQQLVSVSEKKRSRNIGTKTKRLHIHSEDAMELRLTWEEAQEFLCPPPSVKPNIVTIEDQVFEEYDEPPVFGKIKTSASPSGSSGSASDQLGPKEQESLQRTKKDSKKKRKIAEKSKSIQEHKLSGLDALANAAVLGNNLADPDESSSAGITTKHPRHRPGCTCIVCIQPPSGQGKHDPTCTCLACETLKRRFKSLTMRKKKNQLESEAVADQNNQINHIDEAGTSGGVTRQDTSHSTDEGSLNGGQLEVVEPSAAGQLDLNSHPSHEEMETDTYNRPKHD