Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98453.t1 | XP_003612709.1 | 98 | 496 | 10 | 0 | 1 | 496 | 1 | 496 | 3.90E-219 | 770.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98453.t1 | F4ICK8 | 62.2 | 505 | 177 | 8 | 1 | 495 | 1 | 501 | 9.0e-140 | 498.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98453.t1 | G7K9K8 | 98.0 | 496 | 10 | 0 | 1 | 496 | 1 | 496 | 2.8e-219 | 770.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene98453.t1 | TR | IWS1 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98453.t1 | MTR_5g028030 | 98.589 | 496 | 7 | 0 | 1 | 496 | 1 | 496 | 0.0 | 984 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98453.t1 | AT1G32130 | 64.133 | 513 | 156 | 10 | 1 | 496 | 1 | 502 | 0.0 | 588 |
| MS.gene98453.t1 | AT1G32130 | 63.158 | 513 | 152 | 11 | 1 | 496 | 1 | 493 | 0.0 | 569 |
| MS.gene98453.t1 | AT4G19000 | 42.048 | 459 | 176 | 12 | 58 | 496 | 25 | 413 | 1.11e-89 | 280 |
Find 139 sgRNAs with CRISPR-Local
Find 318 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAATCAAACTTAAAAGTATT+TGG | 0.177912 | 5.4:-18773941 | None:intergenic |
| CCAAGGATTTGGTTGATAAA+TGG | 0.185509 | 5.4:+18772020 | MS.gene98453:CDS |
| ATCCCTGCAGCTTTAGTTGC+TGG | 0.233171 | 5.4:-18772506 | None:intergenic |
| AGAAGGAGAAGAGGCTGAAA+GGG | 0.278023 | 5.4:+18769943 | MS.gene98453:CDS |
| AAATCCAAAGGTGTGGCTTC+TGG | 0.295709 | 5.4:-18772707 | None:intergenic |
| ATGAAGAAATCAATGTAAAT+AGG | 0.314425 | 5.4:+18771990 | MS.gene98453:CDS |
| AGGAAGAAAGGGAAGGAAAG+TGG | 0.327063 | 5.4:+18769912 | MS.gene98453:CDS |
| AAAGGGAAGGAAAGTGGGTC+TGG | 0.339481 | 5.4:+18769918 | MS.gene98453:CDS |
| GCTGTCCGTATGTTGATATT+TGG | 0.349835 | 5.4:-18771665 | None:intergenic |
| TAGGAGATTAGCCAAGGATT+TGG | 0.358266 | 5.4:+18772009 | MS.gene98453:CDS |
| AAGAGACGGCGATCTTGATT+TGG | 0.361156 | 5.4:+18772535 | MS.gene98453:CDS |
| GCTCGTGCTCTGATTTCATC+GGG | 0.361338 | 5.4:-18772758 | None:intergenic |
| GGTCCGGAGAGTCGTCTTCC+AGG | 0.365768 | 5.4:+18772669 | MS.gene98453:CDS |
| CAAGGATTTGGTTGATAAAT+GGG | 0.367845 | 5.4:+18772021 | MS.gene98453:CDS |
| TAATGAAGGTGCCAGGAATA+TGG | 0.373132 | 5.4:+18770897 | MS.gene98453:CDS |
| GACGAATCGTTGTCGTAAAC+CGG | 0.375541 | 5.4:-18769777 | None:intergenic |
| GAAGGGAGGAAGAGGAAGAA+AGG | 0.381719 | 5.4:+18769900 | MS.gene98453:CDS |
| GGAAAGTGGGTCTGGGAAGA+AGG | 0.382203 | 5.4:+18769926 | MS.gene98453:CDS |
| GGAAAGGGTGGGTCTAGATT+TGG | 0.386770 | 5.4:+18769981 | MS.gene98453:CDS |
| AATGGCGCTGCCACCGGAGC+TGG | 0.393163 | 5.4:+18769854 | MS.gene98453:CDS |
| ACCGGAGCTGGAAGATGAAT+TGG | 0.398311 | 5.4:+18769866 | MS.gene98453:CDS |
| AGGAAGATGAAGGGAGGAAG+AGG | 0.401255 | 5.4:+18769892 | MS.gene98453:CDS |
| TGCTCGTGCTCTGATTTCAT+CGG | 0.401921 | 5.4:-18772759 | None:intergenic |
| TCATAATGCTCTAGATCTAT+AGG | 0.403177 | 5.4:-18771794 | None:intergenic |
| TGGCCTTGATGCATGTTGCC+TGG | 0.404163 | 5.4:-18772687 | None:intergenic |
| GAGATGTGGGATGCACTTGC+TGG | 0.404558 | 5.4:+18770062 | MS.gene98453:CDS |
| AAGAGGACGCTGAGCTTAAT+CGG | 0.405962 | 5.4:+18771405 | MS.gene98453:CDS |
| TGCGAAATACTGAGGATGAT+AGG | 0.410044 | 5.4:+18772356 | MS.gene98453:CDS |
| GTTATCATCATCCATATTCC+TGG | 0.415889 | 5.4:-18770908 | None:intergenic |
| AGAGGGGTTGGTGGGAAAAG+TGG | 0.424017 | 5.4:+18770014 | MS.gene98453:CDS |
| AAGGCCAGAAGCCACACCTT+TGG | 0.425652 | 5.4:+18772703 | MS.gene98453:CDS |
| TTCTCCTGGCGATGCTCCAC+AGG | 0.429208 | 5.4:+18770984 | MS.gene98453:CDS |
| AGGATGATAGGGTTCCTTAC+AGG | 0.430195 | 5.4:+18772368 | MS.gene98453:CDS |
| AAGAAGGAGAAGAGGCTGAA+AGG | 0.431465 | 5.4:+18769942 | MS.gene98453:CDS |
| AAGGGAGGAAGAGGAAGAAA+GGG | 0.431718 | 5.4:+18769901 | MS.gene98453:CDS |
| TTCTTAATCAACCGTTTCCT+CGG | 0.433348 | 5.4:-18769810 | None:intergenic |
| CGTAAACCGGTGTCTGTGAC+CGG | 0.433384 | 5.4:-18769764 | None:intergenic |
| CCATTTATCAACCAAATCCT+TGG | 0.433652 | 5.4:-18772020 | None:intergenic |
| GGTGGTTCTAAGAGAGGGGT+TGG | 0.434042 | 5.4:+18770002 | MS.gene98453:CDS |
| TGCTAAATTTATTGAAGAGT+TGG | 0.438820 | 5.4:+18771615 | MS.gene98453:CDS |
| GGAGTAGAACCTGCTTTGTA+TGG | 0.441599 | 5.4:+18770946 | MS.gene98453:CDS |
| AAGGGAAGGAAAGTGGGTCT+GGG | 0.445015 | 5.4:+18769919 | MS.gene98453:CDS |
| CAGCTGAAGAGAAGTGGTCT+TGG | 0.447062 | 5.4:+18771827 | MS.gene98453:CDS |
| TTTATTAGTTGAGAATGTTA+TGG | 0.452902 | 5.4:+18771361 | MS.gene98453:CDS |
| TGGCTTGAGCCACTTCCTGA+TGG | 0.456323 | 5.4:+18771635 | MS.gene98453:CDS |
| TTAACCGACGGCCTCCTGTA+AGG | 0.457614 | 5.4:-18772382 | None:intergenic |
| GGCTTGAGCCACTTCCTGAT+GGG | 0.457670 | 5.4:+18771636 | MS.gene98453:CDS |
| ATTTACATTGATTTCTTCAT+CGG | 0.467117 | 5.4:-18771987 | None:intergenic |
| GAGGGGTTGGTGGGAAAAGT+GGG | 0.469594 | 5.4:+18770015 | MS.gene98453:CDS |
| TCCAATTCATCTTCCAGCTC+CGG | 0.470206 | 5.4:-18769867 | None:intergenic |
| GGAAGAAAGGGAAGGAAAGT+GGG | 0.471748 | 5.4:+18769913 | MS.gene98453:CDS |
| TGAAGACGGTGAACCGTTGA+TGG | 0.474457 | 5.4:+18769644 | MS.gene98453:CDS |
| TAAGAAATTGCAGCAGTTGA+GGG | 0.478322 | 5.4:+18773861 | MS.gene98453:CDS |
| CGAAATCAAAGCCGAGGAAA+CGG | 0.479189 | 5.4:+18769799 | MS.gene98453:CDS |
| TACGATGAACCACGTTCTCC+TGG | 0.481367 | 5.4:+18770970 | MS.gene98453:CDS |
| TCGTCGAGTTGTTGTGGCTC+CGG | 0.486977 | 5.4:-18769702 | None:intergenic |
| ACTAATAAAGCAATTTCTGC+AGG | 0.487697 | 5.4:-18771347 | None:intergenic |
| AGGCCAGCAACTAAAGCTGC+AGG | 0.496201 | 5.4:+18772503 | MS.gene98453:intron |
| CGAGTACTCTTATTAAATAT+AGG | 0.497284 | 5.4:-18772322 | None:intergenic |
| GAAGGAGAAGAGGCTGAAAG+GGG | 0.497568 | 5.4:+18769944 | MS.gene98453:CDS |
| TGAGGAAGATGATGAAATCA+AGG | 0.503820 | 5.4:+18771280 | MS.gene98453:CDS |
| GGTTCTAAGAGAGGGGTTGG+TGG | 0.507545 | 5.4:+18770005 | MS.gene98453:CDS |
| GTTCTAAGAGAGGGGTTGGT+GGG | 0.509279 | 5.4:+18770006 | MS.gene98453:CDS |
| TTGTAATGCAGGCCTAGGTC+CGG | 0.510730 | 5.4:+18772653 | MS.gene98453:intron |
| GATTTGGTGGTTCTAAGAGA+GGG | 0.512613 | 5.4:+18769997 | MS.gene98453:CDS |
| ATATTTGGCAGACTCCCATC+AGG | 0.519094 | 5.4:-18771650 | None:intergenic |
| GCGAAATACTGAGGATGATA+GGG | 0.519731 | 5.4:+18772357 | MS.gene98453:CDS |
| TCAAAATCGTCGAGTTGTTG+TGG | 0.520003 | 5.4:-18769708 | None:intergenic |
| ACAGTCAATGGCGCTGCCAC+CGG | 0.522918 | 5.4:+18769848 | MS.gene98453:CDS |
| TTGATTAAGAAAAGTGATAC+CGG | 0.525069 | 5.4:+18769822 | MS.gene98453:CDS |
| TCAACCTGTGGAGCATCGCC+AGG | 0.525860 | 5.4:-18770988 | None:intergenic |
| TTGCCTGGAAGACGACTCTC+CGG | 0.529281 | 5.4:-18772672 | None:intergenic |
| TTCTTGAGTTTATTGACCGC+GGG | 0.529753 | 5.4:-18771437 | None:intergenic |
| CGGATTGTCTTCGTAACCCA+TGG | 0.532356 | 5.4:-18769524 | None:intergenic |
| AATTGGAGGAGGAAGATGAA+GGG | 0.534814 | 5.4:+18769883 | MS.gene98453:CDS |
| CTATATTTAATAAGAGTACT+CGG | 0.535250 | 5.4:+18772323 | MS.gene98453:CDS |
| GAATTGGAGGAGGAAGATGA+AGG | 0.537209 | 5.4:+18769882 | MS.gene98453:CDS |
| ATCCGACGGCGAAGGATCAC+CGG | 0.537994 | 5.4:+18769683 | MS.gene98453:CDS |
| AATCATCAGCTTACTTTGAG+AGG | 0.539854 | 5.4:-18771481 | None:intergenic |
| CACCAACCTTCATACGATGC+TGG | 0.541202 | 5.4:-18772799 | None:intergenic |
| GGTAGTGGTAGTAGTGGAAA+GGG | 0.541485 | 5.4:+18769966 | MS.gene98453:CDS |
| GGCAGACTCCCATCAGGAAG+TGG | 0.542089 | 5.4:-18771644 | None:intergenic |
| ATAAGAAATTGCAGCAGTTG+AGG | 0.546540 | 5.4:+18773860 | MS.gene98453:CDS |
| GGGTAGTGGTAGTAGTGGAA+AGG | 0.547194 | 5.4:+18769965 | MS.gene98453:CDS |
| GAGGAAGAGGAAGAAAGGGA+AGG | 0.547980 | 5.4:+18769905 | MS.gene98453:CDS |
| CTCCGGTGATCCTTCGCCGT+CGG | 0.548204 | 5.4:-18769685 | None:intergenic |
| AAGGGTGGGTCTAGATTTGG+TGG | 0.551074 | 5.4:+18769984 | MS.gene98453:CDS |
| GGAGCTGGAAGATGAATTGG+AGG | 0.551704 | 5.4:+18769869 | MS.gene98453:CDS |
| AGGATGATAATGAAGGTGCC+AGG | 0.553447 | 5.4:+18770890 | MS.gene98453:intron |
| TGATACCGGAAAACAGTCAA+TGG | 0.558638 | 5.4:+18769836 | MS.gene98453:CDS |
| ATTTGGTGGTTCTAAGAGAG+GGG | 0.564155 | 5.4:+18769998 | MS.gene98453:CDS |
| AGAGAACAGCTGAAGAGAAG+TGG | 0.564504 | 5.4:+18771821 | MS.gene98453:CDS |
| GAGTGTCGAAGGTCGTGGTA+TGG | 0.565291 | 5.4:+18773918 | MS.gene98453:CDS |
| AGGTGAAGTTAATGAGATGT+GGG | 0.565360 | 5.4:+18770049 | MS.gene98453:CDS |
| TACTCTTATTAAATATAGGT+CGG | 0.568735 | 5.4:-18772318 | None:intergenic |
| CTTCCAGGCAACATGCATCA+AGG | 0.569461 | 5.4:+18772684 | MS.gene98453:CDS |
| TGGAGGAGGAAGATGAAGGG+AGG | 0.576145 | 5.4:+18769886 | MS.gene98453:CDS |
| AAGGAGAAGAGGCTGAAAGG+GGG | 0.577876 | 5.4:+18769945 | MS.gene98453:CDS |
| GTCTGCCAAATATCAACATA+CGG | 0.578071 | 5.4:+18771660 | MS.gene98453:CDS |
| AATTCATCTTCCAGCTCCGG+TGG | 0.578459 | 5.4:-18769864 | None:intergenic |
| GTCATCAAGGATGATAATGA+AGG | 0.578740 | 5.4:+18770883 | MS.gene98453:intron |
| GAGAGGACTTCTATAAGAAG+AGG | 0.579982 | 5.4:-18771464 | None:intergenic |
| ACAAGACCAGCATCGTATGA+AGG | 0.580052 | 5.4:+18772793 | MS.gene98453:CDS |
| AGATTTGGTGGTTCTAAGAG+AGG | 0.580151 | 5.4:+18769996 | MS.gene98453:CDS |
| TTTAGGTATCGTGATGAAGA+CGG | 0.580572 | 5.4:+18769630 | MS.gene98453:intron |
| GTAAACCGGTGTCTGTGACC+GGG | 0.582959 | 5.4:-18769763 | None:intergenic |
| GGTCTGGGAAGAAGGAGAAG+AGG | 0.586570 | 5.4:+18769934 | MS.gene98453:CDS |
| GCTTGAGGTTACAGCAGAAG+AGG | 0.589644 | 5.4:+18771388 | MS.gene98453:CDS |
| GAAGAGAAGTGGTCTTGGAA+AGG | 0.592321 | 5.4:+18771832 | MS.gene98453:CDS |
| TCGTGCCCGGTCACAGACAC+CGG | 0.593225 | 5.4:+18769758 | MS.gene98453:CDS |
| AGTGGTAGTAGTGGAAAGGG+TGG | 0.594986 | 5.4:+18769969 | MS.gene98453:CDS |
| CTTCTTGAGTTTATTGACCG+CGG | 0.595981 | 5.4:-18771438 | None:intergenic |
| GCTGGAAGATGAATTGGAGG+AGG | 0.598340 | 5.4:+18769872 | MS.gene98453:CDS |
| GAATGTTATGGCTGAGCTTG+AGG | 0.598789 | 5.4:+18771373 | MS.gene98453:CDS |
| GACGTACAATCCGACGGCGA+AGG | 0.604113 | 5.4:+18769675 | MS.gene98453:CDS |
| TCATCGTAACCATACAAAGC+AGG | 0.606767 | 5.4:-18770955 | None:intergenic |
| TGTAAATAGGAGATTAGCCA+AGG | 0.607197 | 5.4:+18772003 | MS.gene98453:CDS |
| GCTACAAAACTGAGTGTCGA+AGG | 0.607526 | 5.4:+18773907 | MS.gene98453:CDS |
| GAAGACGACTCTCCGGACCT+AGG | 0.607941 | 5.4:-18772665 | None:intergenic |
| AAGGTGAAGTTAATGAGATG+TGG | 0.610064 | 5.4:+18770048 | MS.gene98453:CDS |
| TTTCTAGGCTGAGGAAGGTG+AGG | 0.613066 | 5.4:+18771262 | MS.gene98453:intron |
| GTGGTAGTAGTGGAAAGGGT+GGG | 0.617409 | 5.4:+18769970 | MS.gene98453:CDS |
| GATAACTTTATAGACGACAC+TGG | 0.622093 | 5.4:+18770925 | MS.gene98453:CDS |
| TAATCGGCAGCACAAGCCCG+CGG | 0.630405 | 5.4:+18771421 | MS.gene98453:CDS |
| CTCGTGCTCTGATTTCATCG+GGG | 0.632880 | 5.4:-18772757 | None:intergenic |
| TGCACTTGCTGGAAATTCTG+AGG | 0.634543 | 5.4:+18770073 | MS.gene98453:CDS |
| AAACTGAGTGTCGAAGGTCG+TGG | 0.635870 | 5.4:+18773913 | MS.gene98453:CDS |
| GCAGGGATGCAATCAAGAGA+CGG | 0.640208 | 5.4:+18772521 | MS.gene98453:CDS |
| ATGATAGGGTTCCTTACAGG+AGG | 0.648469 | 5.4:+18772371 | MS.gene98453:CDS |
| ATTCGTCGAAATCAAAGCCG+AGG | 0.649525 | 5.4:+18769793 | MS.gene98453:CDS |
| GGCCAGCAACTAAAGCTGCA+GGG | 0.650244 | 5.4:+18772504 | MS.gene98453:intron |
| TGAAGACATGCGAAATACTG+AGG | 0.655646 | 5.4:+18772348 | MS.gene98453:CDS |
| GATCACAAAATCCAAAGGTG+TGG | 0.655821 | 5.4:-18772714 | None:intergenic |
| GGAGCATCGCCAGGAGAACG+TGG | 0.660883 | 5.4:-18770979 | None:intergenic |
| TACGACGACGTACAATCCGA+CGG | 0.665565 | 5.4:+18769669 | MS.gene98453:CDS |
| GGACGGATCACAAAATCCAA+AGG | 0.667839 | 5.4:-18772719 | None:intergenic |
| GGTTCCTTACAGGAGGCCGT+CGG | 0.674989 | 5.4:+18772378 | MS.gene98453:CDS |
| ACGTCGTCGTAATCCATCAA+CGG | 0.684522 | 5.4:-18769657 | None:intergenic |
| AAAAGTGGGAATGATCGTGA+AGG | 0.734592 | 5.4:+18770029 | MS.gene98453:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATCTTACTAAAAATTA+AGG | - | chr5.4:18771024-18771043 | None:intergenic | 10.0% |
| !! | AAAATCTTACTAAAAATTAA+GGG | - | chr5.4:18771023-18771042 | None:intergenic | 10.0% |
| !!! | AATTCAATTTCAATTTTTTT+AGG | + | chr5.4:18769613-18769632 | MS.gene98453:intron | 10.0% |
| !! | AAATTGTGTATTTAAAAGAT+GGG | + | chr5.4:18770222-18770241 | MS.gene98453:intron | 15.0% |
| !! | ATTAAAATTGAATGATGAAA+AGG | - | chr5.4:18770121-18770140 | None:intergenic | 15.0% |
| !! | GAAAAGTTATTGTTAAAATA+AGG | - | chr5.4:18771544-18771563 | None:intergenic | 15.0% |
| !! | TAAATTTATAATTGTAATGC+AGG | + | chr5.4:18772642-18772661 | MS.gene98453:intron | 15.0% |
| !! | AAAATGACATAATAGAGAAA+AGG | - | chr5.4:18771245-18771264 | None:intergenic | 20.0% |
| !! | AAACTATATAATCAAGCATA+TGG | - | chr5.4:18773127-18773146 | None:intergenic | 20.0% |
| !! | AACAGATTATTATAGAACAA+TGG | - | chr5.4:18773432-18773451 | None:intergenic | 20.0% |
| !! | AACTATATATGGTTAAGTAT+AGG | + | chr5.4:18773600-18773619 | MS.gene98453:intron | 20.0% |
| !! | AATAAGATACAAGATAATGA+CGG | - | chr5.4:18772076-18772095 | None:intergenic | 20.0% |
| !! | ATAGTTTCATGAATAAAAGT+TGG | + | chr5.4:18773140-18773159 | MS.gene98453:intron | 20.0% |
| !! | ATGAAGAAATCAATGTAAAT+AGG | + | chr5.4:18771990-18772009 | MS.gene98453:CDS | 20.0% |
| !! | CAAATTGTGTATTTAAAAGA+TGG | + | chr5.4:18770221-18770240 | MS.gene98453:intron | 20.0% |
| !! | CATCAGTATATAACTATATA+TGG | + | chr5.4:18773589-18773608 | MS.gene98453:intron | 20.0% |
| !! | TACTCTTATTAAATATAGGT+CGG | - | chr5.4:18772321-18772340 | None:intergenic | 20.0% |
| !! | TCTTGTATGAAATCAATTAT+TGG | + | chr5.4:18771188-18771207 | MS.gene98453:intron | 20.0% |
| !! | TTATTTATTGGCATAAAAAC+TGG | - | chr5.4:18773030-18773049 | None:intergenic | 20.0% |
| !! | TTGATAAAAACATAATAACC+TGG | - | chr5.4:18771964-18771983 | None:intergenic | 20.0% |
| !! | TTTATTAGTTGAGAATGTTA+TGG | + | chr5.4:18771361-18771380 | MS.gene98453:CDS | 20.0% |
| !!! | AGGTTATTATGTTTTTATCA+AGG | + | chr5.4:18771963-18771982 | MS.gene98453:intron | 20.0% |
| !!! | ATTTACATTGATTTCTTCAT+CGG | - | chr5.4:18771990-18772009 | None:intergenic | 20.0% |
| !!! | ATTTCTATTTTTGAATTGCT+TGG | + | chr5.4:18772420-18772439 | MS.gene98453:intron | 20.0% |
| !!! | CTATATTTAATAAGAGTACT+CGG | + | chr5.4:18772323-18772342 | MS.gene98453:CDS | 20.0% |
| !!! | CTTTTTTACATGTATGTTTT+GGG | + | chr5.4:18773216-18773235 | MS.gene98453:intron | 20.0% |
| ! | AAAGTTGGATGATTTAAACA+TGG | + | chr5.4:18773155-18773174 | MS.gene98453:intron | 25.0% |
| ! | AACAAATAATATGCATACAG+GGG | - | chr5.4:18773503-18773522 | None:intergenic | 25.0% |
| ! | AAGTTGGATGATTTAAACAT+GGG | + | chr5.4:18773156-18773175 | MS.gene98453:intron | 25.0% |
| ! | ACAACAAATAATATGCATAC+AGG | - | chr5.4:18773505-18773524 | None:intergenic | 25.0% |
| ! | ACCCAAAAAAAGGATATAAA+AGG | - | chr5.4:18772851-18772870 | None:intergenic | 25.0% |
| ! | ACTAATAATGAACTCATGAA+AGG | - | chr5.4:18772258-18772277 | None:intergenic | 25.0% |
| ! | AGAACTTATAAAAACAGCTT+AGG | + | chr5.4:18770372-18770391 | MS.gene98453:intron | 25.0% |
| ! | ATGACTAATAATGATCTATC+AGG | - | chr5.4:18770768-18770787 | None:intergenic | 25.0% |
| ! | CAACAAATAATATGCATACA+GGG | - | chr5.4:18773504-18773523 | None:intergenic | 25.0% |
| ! | CCAAAACATACATGTAAAAA+AGG | - | chr5.4:18773218-18773237 | None:intergenic | 25.0% |
| ! | CCCAAAAAAAGGATATAAAA+GGG | - | chr5.4:18772850-18772869 | None:intergenic | 25.0% |
| ! | CGAGTACTCTTATTAAATAT+AGG | - | chr5.4:18772325-18772344 | None:intergenic | 25.0% |
| ! | CTGGAAAATGAAATATGTAA+TGG | + | chr5.4:18771113-18771132 | MS.gene98453:intron | 25.0% |
| ! | GATACAATGCTAAATAATCT+TGG | - | chr5.4:18771753-18771772 | None:intergenic | 25.0% |
| ! | TCTCTATGATATGTACTTTA+TGG | + | chr5.4:18770724-18770743 | MS.gene98453:intron | 25.0% |
| ! | TGACTAATAATGATCTATCA+GGG | - | chr5.4:18770767-18770786 | None:intergenic | 25.0% |
| ! | TGCTAAATTTATTGAAGAGT+TGG | + | chr5.4:18771615-18771634 | MS.gene98453:CDS | 25.0% |
| ! | TGCTTTACAATTACCTAAAA+TGG | + | chr5.4:18772197-18772216 | MS.gene98453:intron | 25.0% |
| ! | TTGATTAAGAAAAGTGATAC+CGG | + | chr5.4:18769822-18769841 | MS.gene98453:CDS | 25.0% |
| ! | TTTACTTATTGCATAGTAAC+AGG | + | chr5.4:18772449-18772468 | MS.gene98453:intron | 25.0% |
| !! | ACCCTTTTATATCCTTTTTT+TGG | + | chr5.4:18772846-18772865 | MS.gene98453:intron | 25.0% |
| !! | ATTAAGTTGTTTATCCAAAC+AGG | + | chr5.4:18770669-18770688 | MS.gene98453:intron | 25.0% |
| !! | CAGAAAGATTTAGAATTTCA+AGG | - | chr5.4:18773716-18773735 | None:intergenic | 25.0% |
| !! | CCCTTTTATATCCTTTTTTT+GGG | + | chr5.4:18772847-18772866 | MS.gene98453:intron | 25.0% |
| !! | CTTTAAGCTTTTAGTGTATA+CGG | + | chr5.4:18772872-18772891 | MS.gene98453:intron | 25.0% |
| !! | TAGTTTTCTTGAACTTTTAC+AGG | + | chr5.4:18772483-18772502 | MS.gene98453:intron | 25.0% |
| !! | TATTAGTCATGTCTTTTAGT+TGG | + | chr5.4:18770778-18770797 | MS.gene98453:intron | 25.0% |
| !! | TTAAGTTGTTTATCCAAACA+GGG | + | chr5.4:18770552-18770571 | MS.gene98453:intron | 25.0% |
| !! | TTTTATGCCAATAAATAAGC+AGG | + | chr5.4:18773032-18773051 | MS.gene98453:intron | 25.0% |
| !!! | ATTAGTCATGTCTTTTAGTT+GGG | + | chr5.4:18770779-18770798 | MS.gene98453:intron | 25.0% |
| !!! | CCTTTTTTACATGTATGTTT+TGG | + | chr5.4:18773215-18773234 | MS.gene98453:intron | 25.0% |
| !!! | GTCTAAATGTAGTTTGTTAT+TGG | + | chr5.4:18771896-18771915 | MS.gene98453:intron | 25.0% |
| !!! | TATGTAATGGTTGTTTTTTG+AGG | + | chr5.4:18771126-18771145 | MS.gene98453:intron | 25.0% |
| !!! | TCTAGAATTTTTTCACGTTA+GGG | + | chr5.4:18769561-18769580 | MS.gene98453:intron | 25.0% |
| !!! | TCTCTATTATGTCATTTTCT+AGG | + | chr5.4:18771247-18771266 | MS.gene98453:intron | 25.0% |
| !!! | TCTGATATTTTGGATAGAAT+GGG | + | chr5.4:18773243-18773262 | MS.gene98453:intron | 25.0% |
| !!! | TGTAGTTTGTTATTGGAATT+TGG | + | chr5.4:18771903-18771922 | MS.gene98453:intron | 25.0% |
| !!! | TGTTGTTTGGAGTAATATTT+TGG | + | chr5.4:18770820-18770839 | MS.gene98453:intron | 25.0% |
| !!! | TTCTGATATTTTGGATAGAA+TGG | + | chr5.4:18773242-18773261 | MS.gene98453:intron | 25.0% |
| !!! | TTTTGGTTTAAATTTCAGCA+AGG | + | chr5.4:18773273-18773292 | MS.gene98453:intron | 25.0% |
| AAAACATGATATCCACAAGT+TGG | - | chr5.4:18773339-18773358 | None:intergenic | 30.0% | |
| AAACACTTGTGAGATAGTTT+AGG | + | chr5.4:18770349-18770368 | MS.gene98453:intron | 30.0% | |
| AAACATGATATCCACAAGTT+GGG | - | chr5.4:18773338-18773357 | None:intergenic | 30.0% | |
| AAATGCTAGAGAAGAAAACT+TGG | + | chr5.4:18772135-18772154 | MS.gene98453:intron | 30.0% | |
| AATGCTAGAGAAGAAAACTT+GGG | + | chr5.4:18772136-18772155 | MS.gene98453:intron | 30.0% | |
| ACAAATAATATGCATACAGG+GGG | - | chr5.4:18773502-18773521 | None:intergenic | 30.0% | |
| ACTAATAAAGCAATTTCTGC+AGG | - | chr5.4:18771350-18771369 | None:intergenic | 30.0% | |
| AGCTTAAAGAACCCAAAAAA+AGG | - | chr5.4:18772861-18772880 | None:intergenic | 30.0% | |
| AGGAGCAAAGTAAAAAAAGT+TGG | - | chr5.4:18772912-18772931 | None:intergenic | 30.0% | |
| ATGATTTAAACATGGGATAC+TGG | + | chr5.4:18773163-18773182 | MS.gene98453:intron | 30.0% | |
| ATGTGAAGAAAACAACGATA+GGG | + | chr5.4:18771871-18771890 | MS.gene98453:intron | 30.0% | |
| GCTTATTTGTTCTTATCTAC+GGG | + | chr5.4:18770258-18770277 | MS.gene98453:intron | 30.0% | |
| GGAATTTGGAAGTAATATTC+TGG | + | chr5.4:18771917-18771936 | MS.gene98453:intron | 30.0% | |
| GGCTTATTTGTTCTTATCTA+CGG | + | chr5.4:18770257-18770276 | MS.gene98453:intron | 30.0% | |
| GGGAAAAAAAAAAAACAGCA+TGG | - | chr5.4:18773482-18773501 | None:intergenic | 30.0% | |
| GTAACTGCATAACAAGAAAA+CGG | - | chr5.4:18771775-18771794 | None:intergenic | 30.0% | |
| TAAACACTGTATAAAGCGAA+GGG | - | chr5.4:18772116-18772135 | None:intergenic | 30.0% | |
| TCTAGAGAGATAGAAACTTA+CGG | - | chr5.4:18769547-18769566 | None:intergenic | 30.0% | |
| TTAAACACTGTATAAAGCGA+AGG | - | chr5.4:18772117-18772136 | None:intergenic | 30.0% | |
| TTAGTAGAATTTGACCAATG+TGG | + | chr5.4:18773819-18773838 | MS.gene98453:intron | 30.0% | |
| ! | ACAGTTTGAGAGAACTTTTT+AGG | + | chr5.4:18770286-18770305 | MS.gene98453:intron | 30.0% |
| ! | AGTTTGAGAGAACTTTTTAG+GGG | + | chr5.4:18770288-18770307 | MS.gene98453:intron | 30.0% |
| ! | CAGTTTGAGAGAACTTTTTA+GGG | + | chr5.4:18770287-18770306 | MS.gene98453:intron | 30.0% |
| ! | CTGATTTGAAGAACTTGAAA+TGG | - | chr5.4:18771083-18771102 | None:intergenic | 30.0% |
| ! | GTTAAGTTGTTTATCCAAAC+AGG | + | chr5.4:18770551-18770570 | MS.gene98453:intron | 30.0% |
| ! | GTTTTCATAAGCTAACTTAG+AGG | - | chr5.4:18770436-18770455 | None:intergenic | 30.0% |
| ! | TCATAATGCTCTAGATCTAT+AGG | - | chr5.4:18771797-18771816 | None:intergenic | 30.0% |
| ! | TTGTTGTTCAGTTTCACTTA+AGG | + | chr5.4:18772595-18772614 | MS.gene98453:intron | 30.0% |
| !! | AAGGCATTGAGCATTAATAT+TGG | - | chr5.4:18773199-18773218 | None:intergenic | 30.0% |
| !! | AATCAAGGATCTTTTCAAGA+TGG | + | chr5.4:18771295-18771314 | MS.gene98453:CDS | 30.0% |
| !! | ATCAAGGATCTTTTCAAGAT+GGG | + | chr5.4:18771296-18771315 | MS.gene98453:CDS | 30.0% |
| !! | CAAGGATTTGGTTGATAAAT+GGG | + | chr5.4:18772021-18772040 | MS.gene98453:CDS | 30.0% |
| !! | GATATTTTCATTGTTTTGCC+AGG | + | chr5.4:18771943-18771962 | MS.gene98453:intron | 30.0% |
| !! | TTAGTCATGTCTTTTAGTTG+GGG | + | chr5.4:18770780-18770799 | MS.gene98453:intron | 30.0% |
| !! | TTGTTTTTCTCTGTGTTGTT+TGG | + | chr5.4:18770807-18770826 | MS.gene98453:intron | 30.0% |
| !! | TTTGGGTGTTTCTGATATTT+TGG | + | chr5.4:18773233-18773252 | MS.gene98453:intron | 30.0% |
| !!! | CTCTAGAATTTTTTCACGTT+AGG | + | chr5.4:18769560-18769579 | MS.gene98453:intron | 30.0% |
| !!! | GTTGGTGTTTTTTAAGTTCT+GGG | + | chr5.4:18772815-18772834 | MS.gene98453:intron | 30.0% |
| !!! | TTTTTGAGGTCAAACTTTCT+CGG | + | chr5.4:18771140-18771159 | MS.gene98453:intron | 30.0% |
| AAATCTCTGTGATCTCCATA+TGG | + | chr5.4:18773366-18773385 | MS.gene98453:intron | 35.0% | |
| AAGGTGAAGTTAATGAGATG+TGG | + | chr5.4:18770048-18770067 | MS.gene98453:CDS | 35.0% | |
| AATCATCAGCTTACTTTGAG+AGG | - | chr5.4:18771484-18771503 | None:intergenic | 35.0% | |
| AATGATCTATCAGGGTAGAA+AGG | - | chr5.4:18770759-18770778 | None:intergenic | 35.0% | |
| ACCAAAAAAGAAGCAACTTC+AGG | + | chr5.4:18773885-18773904 | MS.gene98453:CDS | 35.0% | |
| AGGTGAAGTTAATGAGATGT+GGG | + | chr5.4:18770049-18770068 | MS.gene98453:CDS | 35.0% | |
| ATAAGAAATTGCAGCAGTTG+AGG | + | chr5.4:18773860-18773879 | MS.gene98453:CDS | 35.0% | |
| ATTTGCTTGTCATTGGAAGT+TGG | - | chr5.4:18772937-18772956 | None:intergenic | 35.0% | |
| CCATTTATCAACCAAATCCT+TGG | - | chr5.4:18772023-18772042 | None:intergenic | 35.0% | |
| CTTATTGCATAGTAACAGGT+TGG | + | chr5.4:18772453-18772472 | MS.gene98453:intron | 35.0% | |
| GATAACTTTATAGACGACAC+TGG | + | chr5.4:18770925-18770944 | MS.gene98453:CDS | 35.0% | |
| GATGTGAAGAAAACAACGAT+AGG | + | chr5.4:18771870-18771889 | MS.gene98453:intron | 35.0% | |
| GATTTGGATCTTTCACAGTA+AGG | + | chr5.4:18772551-18772570 | MS.gene98453:intron | 35.0% | |
| GCACACAAACTAAACTTCAA+AGG | - | chr5.4:18772961-18772980 | None:intergenic | 35.0% | |
| GCTACATTAGACTGTTGTTA+TGG | + | chr5.4:18771508-18771527 | MS.gene98453:intron | 35.0% | |
| GCTTATTTGTGCTTAACTAC+AGG | + | chr5.4:18770323-18770342 | MS.gene98453:intron | 35.0% | |
| GTCTGCCAAATATCAACATA+CGG | + | chr5.4:18771660-18771679 | MS.gene98453:CDS | 35.0% | |
| GTCTTCTTTGTGTTGTGTTT+GGG | + | chr5.4:18772163-18772182 | MS.gene98453:intron | 35.0% | |
| GTGATATGGCAAATTTGTCA+AGG | - | chr5.4:18773101-18773120 | None:intergenic | 35.0% | |
| GTTATCATCATCCATATTCC+TGG | - | chr5.4:18770911-18770930 | None:intergenic | 35.0% | |
| TAACAACAGTCTAATGTAGC+AGG | - | chr5.4:18771508-18771527 | None:intergenic | 35.0% | |
| TAAGAAATTGCAGCAGTTGA+GGG | + | chr5.4:18773861-18773880 | MS.gene98453:CDS | 35.0% | |
| TATAATTGTAATGCAGGCCT+AGG | + | chr5.4:18772648-18772667 | MS.gene98453:intron | 35.0% | |
| TGAGGAAGATGATGAAATCA+AGG | + | chr5.4:18771280-18771299 | MS.gene98453:CDS | 35.0% | |
| TGTGAAGAAAACAACGATAG+GGG | + | chr5.4:18771872-18771891 | MS.gene98453:intron | 35.0% | |
| TGTTTGATAAGTACACTGCA+GGG | + | chr5.4:18773647-18773666 | MS.gene98453:intron | 35.0% | |
| TTCTTAATCAACCGTTTCCT+CGG | - | chr5.4:18769813-18769832 | None:intergenic | 35.0% | |
| TTGTTTGATAAGTACACTGC+AGG | + | chr5.4:18773646-18773665 | MS.gene98453:intron | 35.0% | |
| ! | AGAAGATGTCGACAATTTTC+AGG | + | chr5.4:18769734-18769753 | MS.gene98453:CDS | 35.0% |
| ! | ATCGGGGTCAATTTTAGATT+GGG | - | chr5.4:18772744-18772763 | None:intergenic | 35.0% |
| ! | CAAAGGAATTTGCTTGTCAT+TGG | - | chr5.4:18772944-18772963 | None:intergenic | 35.0% |
| ! | CTGAGGTACATTTGTGATTT+TGG | + | chr5.4:18770090-18770109 | MS.gene98453:intron | 35.0% |
| ! | GGTCTTATGTATGAGAATAG+TGG | + | chr5.4:18770573-18770592 | MS.gene98453:intron | 35.0% |
| ! | GTCATCAAGGATGATAATGA+AGG | + | chr5.4:18770883-18770902 | MS.gene98453:intron | 35.0% |
| ! | TGTAAATAGGAGATTAGCCA+AGG | + | chr5.4:18772003-18772022 | MS.gene98453:CDS | 35.0% |
| ! | TTTAGGTATCGTGATGAAGA+CGG | + | chr5.4:18769630-18769649 | MS.gene98453:intron | 35.0% |
| !! | AGAACTTTTTAGGGGATGTT+TGG | + | chr5.4:18770296-18770315 | MS.gene98453:intron | 35.0% |
| !! | ATTTTGGATAGAATGGGTTC+TGG | + | chr5.4:18773249-18773268 | MS.gene98453:intron | 35.0% |
| !! | CAGCTAGAGTTTTTAGATCA+CGG | + | chr5.4:18771590-18771609 | MS.gene98453:CDS | 35.0% |
| !! | CCAAGGATTTGGTTGATAAA+TGG | + | chr5.4:18772020-18772039 | MS.gene98453:CDS | 35.0% |
| !! | TCAAGGATCTTTTCAAGATG+GGG | + | chr5.4:18771297-18771316 | MS.gene98453:CDS | 35.0% |
| !! | TTGTGTGCTGCTTATATCAA+CGG | + | chr5.4:18772973-18772992 | MS.gene98453:intron | 35.0% |
| !!! | GGTTGGTGTTTTTTAAGTTC+TGG | + | chr5.4:18772814-18772833 | MS.gene98453:intron | 35.0% |
| !!! | TTATGTCATTTTCTAGGCTG+AGG | + | chr5.4:18771253-18771272 | MS.gene98453:intron | 35.0% |
| AAAAGTGGGAATGATCGTGA+AGG | + | chr5.4:18770029-18770048 | MS.gene98453:CDS | 40.0% | |
| AAAGATGGGTCTGTTTCGAT+TGG | + | chr5.4:18770236-18770255 | MS.gene98453:intron | 40.0% | |
| AAATACCGTGAGTGTGAGAA+TGG | + | chr5.4:18773545-18773564 | MS.gene98453:intron | 40.0% | |
| AACAGCATTAGGCCAAAGAA+TGG | - | chr5.4:18773402-18773421 | None:intergenic | 40.0% | |
| AATACCGTGAGTGTGAGAAT+GGG | + | chr5.4:18773546-18773565 | MS.gene98453:intron | 40.0% | |
| AATGGGTGCAAAACACCATA+TGG | - | chr5.4:18773384-18773403 | None:intergenic | 40.0% | |
| AATTGGAGGAGGAAGATGAA+GGG | + | chr5.4:18769883-18769902 | MS.gene98453:CDS | 40.0% | |
| ACAGCATTAGGCCAAAGAAT+GGG | - | chr5.4:18773401-18773420 | None:intergenic | 40.0% | |
| AGTTTCACTTAAGGAATCGC+TGG | + | chr5.4:18772604-18772623 | MS.gene98453:intron | 40.0% | |
| ATGGTACCAGAAACAGCATT+AGG | - | chr5.4:18773413-18773432 | None:intergenic | 40.0% | |
| CAAGCATATGGCATGTGATA+TGG | - | chr5.4:18773115-18773134 | None:intergenic | 40.0% | |
| CTAGAGAAGAAAACTTGGGT+GGG | + | chr5.4:18772140-18772159 | MS.gene98453:intron | 40.0% | |
| CTCATACATAAGACCCTGTT+TGG | - | chr5.4:18770568-18770587 | None:intergenic | 40.0% | |
| CTGCAGTTAACAATCCACAT+TGG | - | chr5.4:18773836-18773855 | None:intergenic | 40.0% | |
| CTGTATAAAGCGAAGGGAAT+TGG | - | chr5.4:18772110-18772129 | None:intergenic | 40.0% | |
| CTTCTTGAGTTTATTGACCG+CGG | - | chr5.4:18771441-18771460 | None:intergenic | 40.0% | |
| CTTGTCATTGGAAGTTGGAA+AGG | - | chr5.4:18772932-18772951 | None:intergenic | 40.0% | |
| GAGAGGACTTCTATAAGAAG+AGG | - | chr5.4:18771467-18771486 | None:intergenic | 40.0% | |
| GATCACAAAATCCAAAGGTG+TGG | - | chr5.4:18772717-18772736 | None:intergenic | 40.0% | |
| GCGAAATACTGAGGATGATA+GGG | + | chr5.4:18772357-18772376 | MS.gene98453:CDS | 40.0% | |
| GCTGTCCGTATGTTGATATT+TGG | - | chr5.4:18771668-18771687 | None:intergenic | 40.0% | |
| GGGAATAAATCATCAACCTG+TGG | - | chr5.4:18771003-18771022 | None:intergenic | 40.0% | |
| GGTCTTCTTTGTGTTGTGTT+TGG | + | chr5.4:18772162-18772181 | MS.gene98453:intron | 40.0% | |
| TAGAGAAGAAAACTTGGGTG+GGG | + | chr5.4:18772141-18772160 | MS.gene98453:intron | 40.0% | |
| TCACACGCCTGCTTATTTAT+TGG | - | chr5.4:18773042-18773061 | None:intergenic | 40.0% | |
| TCATCGTAACCATACAAAGC+AGG | - | chr5.4:18770958-18770977 | None:intergenic | 40.0% | |
| TGAAGACATGCGAAATACTG+AGG | + | chr5.4:18772348-18772367 | MS.gene98453:CDS | 40.0% | |
| TGATACCGGAAAACAGTCAA+TGG | + | chr5.4:18769836-18769855 | MS.gene98453:CDS | 40.0% | |
| TGCGAAATACTGAGGATGAT+AGG | + | chr5.4:18772356-18772375 | MS.gene98453:CDS | 40.0% | |
| TTCTTGAGTTTATTGACCGC+GGG | - | chr5.4:18771440-18771459 | None:intergenic | 40.0% | |
| ! | CATCGGGGTCAATTTTAGAT+TGG | - | chr5.4:18772745-18772764 | None:intergenic | 40.0% |
| ! | CTTTTCACCTACTGTTTCAC+AGG | + | chr5.4:18771558-18771577 | MS.gene98453:intron | 40.0% |
| ! | GGTCAATTTTAGATTGGGGA+CGG | - | chr5.4:18772739-18772758 | None:intergenic | 40.0% |
| ! | TACCTAAAATGGCTGACTCT+TGG | + | chr5.4:18772208-18772227 | MS.gene98453:intron | 40.0% |
| ! | TAGGAGATTAGCCAAGGATT+TGG | + | chr5.4:18772009-18772028 | MS.gene98453:CDS | 40.0% |
| ! | TCAAAATCGTCGAGTTGTTG+TGG | - | chr5.4:18769711-18769730 | None:intergenic | 40.0% |
| ! | TCGGGGTCAATTTTAGATTG+GGG | - | chr5.4:18772743-18772762 | None:intergenic | 40.0% |
| ! | TTCTCACACTCACGGTATTT+TGG | - | chr5.4:18773545-18773564 | None:intergenic | 40.0% |
| !! | AGATTTGGTGGTTCTAAGAG+AGG | + | chr5.4:18769996-18770015 | MS.gene98453:CDS | 40.0% |
| !! | ATTTGGTGGTTCTAAGAGAG+GGG | + | chr5.4:18769998-18770017 | MS.gene98453:CDS | 40.0% |
| !! | CAAGCGTACTTTTTAACCGA+CGG | - | chr5.4:18772397-18772416 | None:intergenic | 40.0% |
| !! | CTCTGTTGTTTCTGTCATCA+AGG | + | chr5.4:18770870-18770889 | MS.gene98453:intron | 40.0% |
| !! | GATTTGGTGGTTCTAAGAGA+GGG | + | chr5.4:18769997-18770016 | MS.gene98453:CDS | 40.0% |
| !! | TAATGAAGGTGCCAGGAATA+TGG | + | chr5.4:18770897-18770916 | MS.gene98453:CDS | 40.0% |
| !! | TTCCAAGAGTCAGCCATTTT+AGG | - | chr5.4:18772213-18772232 | None:intergenic | 40.0% |
| !!! | ATAGAATGGGTTCTGGCTTT+TGG | + | chr5.4:18773256-18773275 | MS.gene98453:intron | 40.0% |
| !!! | GCCTGAAGTTGCTTCTTTTT+TGG | - | chr5.4:18773889-18773908 | None:intergenic | 40.0% |
| AAGAAGGAGAAGAGGCTGAA+AGG | + | chr5.4:18769942-18769961 | MS.gene98453:CDS | 45.0% | |
| AAGAGACGGCGATCTTGATT+TGG | + | chr5.4:18772535-18772554 | MS.gene98453:CDS | 45.0% | |
| AAGAGGACGCTGAGCTTAAT+CGG | + | chr5.4:18771405-18771424 | MS.gene98453:CDS | 45.0% | |
| AAGGGAGGAAGAGGAAGAAA+GGG | + | chr5.4:18769901-18769920 | MS.gene98453:CDS | 45.0% | |
| ACAAGACCAGCATCGTATGA+AGG | + | chr5.4:18772793-18772812 | MS.gene98453:CDS | 45.0% | |
| ACGTCGTCGTAATCCATCAA+CGG | - | chr5.4:18769660-18769679 | None:intergenic | 45.0% | |
| AGAAGGAGAAGAGGCTGAAA+GGG | + | chr5.4:18769943-18769962 | MS.gene98453:CDS | 45.0% | |
| AGAGAACAGCTGAAGAGAAG+TGG | + | chr5.4:18771821-18771840 | MS.gene98453:CDS | 45.0% | |
| AGGAAGAAAGGGAAGGAAAG+TGG | + | chr5.4:18769912-18769931 | MS.gene98453:CDS | 45.0% | |
| AGGATGATAGGGTTCCTTAC+AGG | + | chr5.4:18772368-18772387 | MS.gene98453:CDS | 45.0% | |
| AGGCACAATGTAAAGTCGCT+AGG | - | chr5.4:18773081-18773100 | None:intergenic | 45.0% | |
| ATACCGTGAGTGTGAGAATG+GGG | + | chr5.4:18773547-18773566 | MS.gene98453:intron | 45.0% | |
| ATATACTGATGCATCCCTGC+TGG | - | chr5.4:18773580-18773599 | None:intergenic | 45.0% | |
| ATATTTGGCAGACTCCCATC+AGG | - | chr5.4:18771653-18771672 | None:intergenic | 45.0% | |
| ATGATAGGGTTCCTTACAGG+AGG | + | chr5.4:18772371-18772390 | MS.gene98453:CDS | 45.0% | |
| ATTCGTCGAAATCAAAGCCG+AGG | + | chr5.4:18769793-18769812 | MS.gene98453:CDS | 45.0% | |
| CGAAATCAAAGCCGAGGAAA+CGG | + | chr5.4:18769799-18769818 | MS.gene98453:CDS | 45.0% | |
| CTATCAGGGTAGAAAGGAGA+GGG | - | chr5.4:18770753-18770772 | None:intergenic | 45.0% | |
| GAATGTTATGGCTGAGCTTG+AGG | + | chr5.4:18771373-18771392 | MS.gene98453:CDS | 45.0% | |
| GAATTGGAGGAGGAAGATGA+AGG | + | chr5.4:18769882-18769901 | MS.gene98453:CDS | 45.0% | |
| GACGAATCGTTGTCGTAAAC+CGG | - | chr5.4:18769780-18769799 | None:intergenic | 45.0% | |
| GCTAGAGAAGAAAACTTGGG+TGG | + | chr5.4:18772139-18772158 | MS.gene98453:intron | 45.0% | |
| GGAAGAAAGGGAAGGAAAGT+GGG | + | chr5.4:18769913-18769932 | MS.gene98453:CDS | 45.0% | |
| GGACGGATCACAAAATCCAA+AGG | - | chr5.4:18772722-18772741 | None:intergenic | 45.0% | |
| GGAGTAGAACCTGCTTTGTA+TGG | + | chr5.4:18770946-18770965 | MS.gene98453:CDS | 45.0% | |
| TCAAATCAGCTGTAGAGTGC+TGG | + | chr5.4:18771094-18771113 | MS.gene98453:intron | 45.0% | |
| TCCAATTCATCTTCCAGCTC+CGG | - | chr5.4:18769870-18769889 | None:intergenic | 45.0% | |
| TCTATCAGGGTAGAAAGGAG+AGG | - | chr5.4:18770754-18770773 | None:intergenic | 45.0% | |
| TGCTCGTGCTCTGATTTCAT+CGG | - | chr5.4:18772762-18772781 | None:intergenic | 45.0% | |
| ! | AAATCCAAAGGTGTGGCTTC+TGG | - | chr5.4:18772710-18772729 | None:intergenic | 45.0% |
| ! | ATCCACAAGTTGGGAATGCA+AGG | - | chr5.4:18773329-18773348 | None:intergenic | 45.0% |
| ! | GAAGAGAAGTGGTCTTGGAA+AGG | + | chr5.4:18771832-18771851 | MS.gene98453:CDS | 45.0% |
| ! | GCTGTTTCCTGTGAAACAGT+AGG | - | chr5.4:18771568-18771587 | None:intergenic | 45.0% |
| ! | GGTAGTGGTAGTAGTGGAAA+GGG | + | chr5.4:18769966-18769985 | MS.gene98453:CDS | 45.0% |
| ! | GGTGTTTTGCACCCATTCTT+TGG | + | chr5.4:18773387-18773406 | MS.gene98453:intron | 45.0% |
| ! | TCCACAAGTTGGGAATGCAA+GGG | - | chr5.4:18773328-18773347 | None:intergenic | 45.0% |
| ! | TGCACTTGCTGGAAATTCTG+AGG | + | chr5.4:18770073-18770092 | MS.gene98453:CDS | 45.0% |
| ! | TTTCTAGTGTATGGGGCAGA+TGG | + | chr5.4:18773001-18773020 | MS.gene98453:intron | 45.0% |
| !! | ACAATTTTCAGGATCGTGCC+CGG | + | chr5.4:18769745-18769764 | MS.gene98453:CDS | 45.0% |
| !! | ACGGTGACGTTTCTAGTGTA+TGG | + | chr5.4:18772992-18773011 | MS.gene98453:intron | 45.0% |
| !! | AGGAATCGCTGGTTTGTAGT+TGG | + | chr5.4:18772615-18772634 | MS.gene98453:intron | 45.0% |
| !! | AGGATGATAATGAAGGTGCC+AGG | + | chr5.4:18770890-18770909 | MS.gene98453:intron | 45.0% |
| !! | ATCGCTGGTTTGTAGTTGGA+TGG | + | chr5.4:18772619-18772638 | MS.gene98453:intron | 45.0% |
| !! | CGGTGACGTTTCTAGTGTAT+GGG | + | chr5.4:18772993-18773012 | MS.gene98453:intron | 45.0% |
| !! | CTTTGGCCTAATGCTGTTTC+TGG | + | chr5.4:18773404-18773423 | MS.gene98453:intron | 45.0% |
| !! | GCTACAAAACTGAGTGTCGA+AGG | + | chr5.4:18773907-18773926 | MS.gene98453:CDS | 45.0% |
| !! | GGTGACGTTTCTAGTGTATG+GGG | + | chr5.4:18772994-18773013 | MS.gene98453:intron | 45.0% |
| !! | GTCATTTTCTAGGCTGAGGA+AGG | + | chr5.4:18771257-18771276 | MS.gene98453:intron | 45.0% |
| AAAGGGAAGGAAAGTGGGTC+TGG | + | chr5.4:18769918-18769937 | MS.gene98453:CDS | 50.0% | |
| AAGGAGAAGAGGCTGAAAGG+GGG | + | chr5.4:18769945-18769964 | MS.gene98453:CDS | 50.0% | |
| AAGGGAAGGAAAGTGGGTCT+GGG | + | chr5.4:18769919-18769938 | MS.gene98453:CDS | 50.0% | |
| AAGGGTGGGTCTAGATTTGG+TGG | + | chr5.4:18769984-18770003 | MS.gene98453:CDS | 50.0% | |
| AATTCATCTTCCAGCTCCGG+TGG | - | chr5.4:18769867-18769886 | None:intergenic | 50.0% | |
| ACCGGAGCTGGAAGATGAAT+TGG | + | chr5.4:18769866-18769885 | MS.gene98453:CDS | 50.0% | |
| AGGAAGATGAAGGGAGGAAG+AGG | + | chr5.4:18769892-18769911 | MS.gene98453:CDS | 50.0% | |
| CACCAACCTTCATACGATGC+TGG | - | chr5.4:18772802-18772821 | None:intergenic | 50.0% | |
| CAGCTGAAGAGAAGTGGTCT+TGG | + | chr5.4:18771827-18771846 | MS.gene98453:CDS | 50.0% | |
| CTCGTGCTCTGATTTCATCG+GGG | - | chr5.4:18772760-18772779 | None:intergenic | 50.0% | |
| CTTCCAGGCAACATGCATCA+AGG | + | chr5.4:18772684-18772703 | MS.gene98453:CDS | 50.0% | |
| GAAGGAGAAGAGGCTGAAAG+GGG | + | chr5.4:18769944-18769963 | MS.gene98453:CDS | 50.0% | |
| GAAGGGAGGAAGAGGAAGAA+AGG | + | chr5.4:18769900-18769919 | MS.gene98453:CDS | 50.0% | |
| GACCAGCATCGTATGAAGGT+TGG | + | chr5.4:18772797-18772816 | MS.gene98453:intron | 50.0% | |
| GAGGAAGAGGAAGAAAGGGA+AGG | + | chr5.4:18769905-18769924 | MS.gene98453:CDS | 50.0% | |
| GCAGGGATGCAATCAAGAGA+CGG | + | chr5.4:18772521-18772540 | MS.gene98453:CDS | 50.0% | |
| GCTCGTGCTCTGATTTCATC+GGG | - | chr5.4:18772761-18772780 | None:intergenic | 50.0% | |
| GCTGGAAGATGAATTGGAGG+AGG | + | chr5.4:18769872-18769891 | MS.gene98453:CDS | 50.0% | |
| GCTTGAGGTTACAGCAGAAG+AGG | + | chr5.4:18771388-18771407 | MS.gene98453:CDS | 50.0% | |
| GGAAAGGGTGGGTCTAGATT+TGG | + | chr5.4:18769981-18770000 | MS.gene98453:CDS | 50.0% | |
| GGAGCTGGAAGATGAATTGG+AGG | + | chr5.4:18769869-18769888 | MS.gene98453:CDS | 50.0% | |
| TACCGTGAGTGTGAGAATGG+GGG | + | chr5.4:18773548-18773567 | MS.gene98453:intron | 50.0% | |
| TACGACGACGTACAATCCGA+CGG | + | chr5.4:18769669-18769688 | MS.gene98453:CDS | 50.0% | |
| TACGATGAACCACGTTCTCC+TGG | + | chr5.4:18770970-18770989 | MS.gene98453:CDS | 50.0% | |
| TCCCTTGCATTCCCAACTTG+TGG | + | chr5.4:18773324-18773343 | MS.gene98453:intron | 50.0% | |
| TGAAGACGGTGAACCGTTGA+TGG | + | chr5.4:18769644-18769663 | MS.gene98453:CDS | 50.0% | |
| TTGTAATGCAGGCCTAGGTC+CGG | + | chr5.4:18772653-18772672 | MS.gene98453:intron | 50.0% | |
| TTTCTAGGCTGAGGAAGGTG+AGG | + | chr5.4:18771262-18771281 | MS.gene98453:intron | 50.0% | |
| ! | AAAGGGGGTAGTGGTAGTAG+TGG | + | chr5.4:18769960-18769979 | MS.gene98453:CDS | 50.0% |
| ! | AGTGGTAGTAGTGGAAAGGG+TGG | + | chr5.4:18769969-18769988 | MS.gene98453:CDS | 50.0% |
| ! | ATCCCTGCAGCTTTAGTTGC+TGG | - | chr5.4:18772509-18772528 | None:intergenic | 50.0% |
| ! | GGGTAGTGGTAGTAGTGGAA+AGG | + | chr5.4:18769965-18769984 | MS.gene98453:CDS | 50.0% |
| ! | GTGGTAGTAGTGGAAAGGGT+GGG | + | chr5.4:18769970-18769989 | MS.gene98453:CDS | 50.0% |
| !! | AAACTGAGTGTCGAAGGTCG+TGG | + | chr5.4:18773913-18773932 | MS.gene98453:CDS | 50.0% |
| !! | CAGCGCCATTGACTGTTTTC+CGG | - | chr5.4:18769844-18769863 | None:intergenic | 50.0% |
| !! | GTTCTAAGAGAGGGGTTGGT+GGG | + | chr5.4:18770006-18770025 | MS.gene98453:CDS | 50.0% |
| AAGAGGCTGAAAGGGGGTAG+TGG | + | chr5.4:18769951-18769970 | MS.gene98453:CDS | 55.0% | |
| AAGGCCAGAAGCCACACCTT+TGG | + | chr5.4:18772703-18772722 | MS.gene98453:CDS | 55.0% | |
| AGGCCAGCAACTAAAGCTGC+AGG | + | chr5.4:18772503-18772522 | MS.gene98453:intron | 55.0% | |
| CGTAAACCGGTGTCTGTGAC+CGG | - | chr5.4:18769767-18769786 | None:intergenic | 55.0% | |
| GAGATGTGGGATGCACTTGC+TGG | + | chr5.4:18770062-18770081 | MS.gene98453:CDS | 55.0% | |
| GGAAAGTGGGTCTGGGAAGA+AGG | + | chr5.4:18769926-18769945 | MS.gene98453:CDS | 55.0% | |
| GGCCAGCAACTAAAGCTGCA+GGG | + | chr5.4:18772504-18772523 | MS.gene98453:intron | 55.0% | |
| GGCTTGAGCCACTTCCTGAT+GGG | + | chr5.4:18771636-18771655 | MS.gene98453:CDS | 55.0% | |
| GGTCTGGGAAGAAGGAGAAG+AGG | + | chr5.4:18769934-18769953 | MS.gene98453:CDS | 55.0% | |
| GTAAACCGGTGTCTGTGACC+GGG | - | chr5.4:18769766-18769785 | None:intergenic | 55.0% | |
| TGCCCCCATTCTCACACTCA+CGG | - | chr5.4:18773553-18773572 | None:intergenic | 55.0% | |
| TGGAGGAGGAAGATGAAGGG+AGG | + | chr5.4:18769886-18769905 | MS.gene98453:CDS | 55.0% | |
| TGGCTTGAGCCACTTCCTGA+TGG | + | chr5.4:18771635-18771654 | MS.gene98453:CDS | 55.0% | |
| TTAACCGACGGCCTCCTGTA+AGG | - | chr5.4:18772385-18772404 | None:intergenic | 55.0% | |
| TTGCCTGGAAGACGACTCTC+CGG | - | chr5.4:18772675-18772694 | None:intergenic | 55.0% | |
| ! | AATGGGGGCATATGCCAGCA+GGG | + | chr5.4:18773563-18773582 | MS.gene98453:intron | 55.0% |
| ! | TCGTCGAGTTGTTGTGGCTC+CGG | - | chr5.4:18769705-18769724 | None:intergenic | 55.0% |
| ! | TGGCCTTGATGCATGTTGCC+TGG | - | chr5.4:18772690-18772709 | None:intergenic | 55.0% |
| !! | AGAGGGGTTGGTGGGAAAAG+TGG | + | chr5.4:18770014-18770033 | MS.gene98453:CDS | 55.0% |
| !! | GAGGGGTTGGTGGGAAAAGT+GGG | + | chr5.4:18770015-18770034 | MS.gene98453:CDS | 55.0% |
| !! | GAGTGTCGAAGGTCGTGGTA+TGG | + | chr5.4:18773918-18773937 | MS.gene98453:CDS | 55.0% |
| !! | GGTGGTTCTAAGAGAGGGGT+TGG | + | chr5.4:18770002-18770021 | MS.gene98453:CDS | 55.0% |
| !! | GGTTCTAAGAGAGGGGTTGG+TGG | + | chr5.4:18770005-18770024 | MS.gene98453:CDS | 55.0% |
| ACAGTCAATGGCGCTGCCAC+CGG | + | chr5.4:18769848-18769867 | MS.gene98453:CDS | 60.0% | |
| ATCCGACGGCGAAGGATCAC+CGG | + | chr5.4:18769683-18769702 | MS.gene98453:CDS | 60.0% | |
| GAAGACGACTCTCCGGACCT+AGG | - | chr5.4:18772668-18772687 | None:intergenic | 60.0% | |
| GACGTACAATCCGACGGCGA+AGG | + | chr5.4:18769675-18769694 | MS.gene98453:CDS | 60.0% | |
| GGCAGACTCCCATCAGGAAG+TGG | - | chr5.4:18771647-18771666 | None:intergenic | 60.0% | |
| GGTTCCTTACAGGAGGCCGT+CGG | + | chr5.4:18772378-18772397 | MS.gene98453:CDS | 60.0% | |
| TAATCGGCAGCACAAGCCCG+CGG | + | chr5.4:18771421-18771440 | MS.gene98453:CDS | 60.0% | |
| TTCTCCTGGCGATGCTCCAC+AGG | + | chr5.4:18770984-18771003 | MS.gene98453:CDS | 60.0% | |
| ! | GAATGGGGGCATATGCCAGC+AGG | + | chr5.4:18773562-18773581 | MS.gene98453:intron | 60.0% |
| !! | TCAACCTGTGGAGCATCGCC+AGG | - | chr5.4:18770991-18771010 | None:intergenic | 60.0% |
| CTCCGGTGATCCTTCGCCGT+CGG | - | chr5.4:18769688-18769707 | None:intergenic | 65.0% | |
| GGTCCGGAGAGTCGTCTTCC+AGG | + | chr5.4:18772669-18772688 | MS.gene98453:CDS | 65.0% | |
| TCGTGCCCGGTCACAGACAC+CGG | + | chr5.4:18769758-18769777 | MS.gene98453:CDS | 65.0% | |
| !! | GGAGCATCGCCAGGAGAACG+TGG | - | chr5.4:18770982-18771001 | None:intergenic | 65.0% |
| AATGGCGCTGCCACCGGAGC+TGG | + | chr5.4:18769854-18769873 | MS.gene98453:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 18769526 | 18773954 | 18769526 | ID=MS.gene98453 |
| chr5.4 | mRNA | 18769526 | 18773954 | 18769526 | ID=MS.gene98453.t1;Parent=MS.gene98453 |
| chr5.4 | exon | 18769526 | 18769545 | 18769526 | ID=MS.gene98453.t1.exon1;Parent=MS.gene98453.t1 |
| chr5.4 | CDS | 18769526 | 18769545 | 18769526 | ID=cds.MS.gene98453.t1;Parent=MS.gene98453.t1 |
| chr5.4 | exon | 18769635 | 18770094 | 18769635 | ID=MS.gene98453.t1.exon2;Parent=MS.gene98453.t1 |
| chr5.4 | CDS | 18769635 | 18770094 | 18769635 | ID=cds.MS.gene98453.t1;Parent=MS.gene98453.t1 |
| chr5.4 | exon | 18770892 | 18771005 | 18770892 | ID=MS.gene98453.t1.exon3;Parent=MS.gene98453.t1 |
| chr5.4 | CDS | 18770892 | 18771005 | 18770892 | ID=cds.MS.gene98453.t1;Parent=MS.gene98453.t1 |
| chr5.4 | exon | 18771269 | 18771489 | 18771269 | ID=MS.gene98453.t1.exon4;Parent=MS.gene98453.t1 |
| chr5.4 | CDS | 18771269 | 18771489 | 18771269 | ID=cds.MS.gene98453.t1;Parent=MS.gene98453.t1 |
| chr5.4 | exon | 18771580 | 18771709 | 18771580 | ID=MS.gene98453.t1.exon5;Parent=MS.gene98453.t1 |
| chr5.4 | CDS | 18771580 | 18771709 | 18771580 | ID=cds.MS.gene98453.t1;Parent=MS.gene98453.t1 |
| chr5.4 | exon | 18771791 | 18771853 | 18771791 | ID=MS.gene98453.t1.exon6;Parent=MS.gene98453.t1 |
| chr5.4 | CDS | 18771791 | 18771853 | 18771791 | ID=cds.MS.gene98453.t1;Parent=MS.gene98453.t1 |
| chr5.4 | exon | 18771965 | 18772042 | 18771965 | ID=MS.gene98453.t1.exon7;Parent=MS.gene98453.t1 |
| chr5.4 | CDS | 18771965 | 18772042 | 18771965 | ID=cds.MS.gene98453.t1;Parent=MS.gene98453.t1 |
| chr5.4 | exon | 18772316 | 18772407 | 18772316 | ID=MS.gene98453.t1.exon8;Parent=MS.gene98453.t1 |
| chr5.4 | CDS | 18772316 | 18772407 | 18772316 | ID=cds.MS.gene98453.t1;Parent=MS.gene98453.t1 |
| chr5.4 | exon | 18772505 | 18772567 | 18772505 | ID=MS.gene98453.t1.exon9;Parent=MS.gene98453.t1 |
| chr5.4 | CDS | 18772505 | 18772567 | 18772505 | ID=cds.MS.gene98453.t1;Parent=MS.gene98453.t1 |
| chr5.4 | exon | 18772664 | 18772814 | 18772664 | ID=MS.gene98453.t1.exon10;Parent=MS.gene98453.t1 |
| chr5.4 | CDS | 18772664 | 18772814 | 18772664 | ID=cds.MS.gene98453.t1;Parent=MS.gene98453.t1 |
| chr5.4 | exon | 18773856 | 18773954 | 18773856 | ID=MS.gene98453.t1.exon11;Parent=MS.gene98453.t1 |
| chr5.4 | CDS | 18773856 | 18773954 | 18773856 | ID=cds.MS.gene98453.t1;Parent=MS.gene98453.t1 |
| Gene Sequence |
| Protein sequence |
