Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene98643.t1 | AES78253.1 | 85.7 | 484 | 64 | 1 | 1 | 479 | 69 | 552 | 1.50E-220 | 775.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene98643.t1 | Q5N6V8 | 35.5 | 200 | 88 | 5 | 1 | 165 | 88 | 281 | 5.7e-22 | 107.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene98643.t1 | G7L033 | 85.7 | 484 | 64 | 1 | 1 | 479 | 69 | 552 | 1.1e-220 | 775.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene98643.t1 | TF | GARP-G2-like |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene98643.t1 | MTR_7g026400 | 88.430 | 484 | 51 | 1 | 1 | 479 | 69 | 552 | 0.0 | 816 |
MS.gene98643.t1 | MTR_0450s0040 | 49.158 | 297 | 109 | 6 | 1 | 296 | 86 | 341 | 6.53e-73 | 234 |
MS.gene98643.t1 | MTR_2g034960 | 41.401 | 157 | 80 | 4 | 1 | 145 | 111 | 267 | 1.69e-27 | 116 |
MS.gene98643.t1 | MTR_4g121020 | 25.822 | 426 | 223 | 12 | 1 | 352 | 9 | 415 | 8.69e-27 | 114 |
MS.gene98643.t1 | MTR_4g121020 | 25.822 | 426 | 223 | 12 | 1 | 352 | 113 | 519 | 1.30e-26 | 114 |
MS.gene98643.t1 | MTR_4g121020 | 25.822 | 426 | 223 | 12 | 1 | 352 | 113 | 519 | 1.37e-26 | 114 |
MS.gene98643.t1 | MTR_6g088950 | 62.222 | 90 | 32 | 2 | 1 | 88 | 86 | 175 | 1.28e-25 | 104 |
MS.gene98643.t1 | MTR_1g013170 | 36.095 | 169 | 78 | 3 | 2 | 147 | 88 | 249 | 2.37e-25 | 108 |
MS.gene98643.t1 | MTR_4g021760 | 36.310 | 168 | 94 | 4 | 1 | 166 | 92 | 248 | 3.40e-25 | 105 |
MS.gene98643.t1 | MTR_1g032570 | 34.555 | 191 | 100 | 5 | 1 | 167 | 24 | 213 | 5.52e-25 | 108 |
MS.gene98643.t1 | MTR_8g079940 | 35.912 | 181 | 98 | 5 | 1 | 163 | 107 | 287 | 6.85e-25 | 108 |
MS.gene98643.t1 | MTR_1g032570 | 34.555 | 191 | 100 | 5 | 1 | 167 | 93 | 282 | 1.26e-24 | 107 |
MS.gene98643.t1 | MTR_3g086100 | 33.493 | 209 | 111 | 6 | 1 | 184 | 24 | 229 | 1.80e-24 | 106 |
MS.gene98643.t1 | MTR_3g106220 | 37.143 | 175 | 81 | 5 | 9 | 156 | 98 | 270 | 6.37e-24 | 105 |
MS.gene98643.t1 | MTR_3g086100 | 33.493 | 209 | 111 | 6 | 1 | 184 | 95 | 300 | 6.38e-24 | 105 |
MS.gene98643.t1 | MTR_4g021855 | 38.255 | 149 | 73 | 2 | 1 | 145 | 91 | 224 | 8.02e-24 | 101 |
MS.gene98643.t1 | MTR_7g117705 | 34.524 | 168 | 81 | 3 | 2 | 147 | 89 | 249 | 1.24e-23 | 103 |
MS.gene98643.t1 | MTR_4g021790 | 37.584 | 149 | 74 | 2 | 1 | 145 | 91 | 224 | 2.42e-23 | 99.8 |
MS.gene98643.t1 | MTR_4g021845 | 36.620 | 142 | 71 | 2 | 1 | 138 | 91 | 217 | 3.74e-23 | 97.8 |
MS.gene98643.t1 | MTR_2g450070 | 33.708 | 178 | 87 | 4 | 8 | 156 | 107 | 282 | 1.00e-22 | 102 |
MS.gene98643.t1 | MTR_2g450070 | 33.708 | 178 | 87 | 4 | 8 | 156 | 107 | 282 | 1.42e-22 | 101 |
MS.gene98643.t1 | MTR_4g131600 | 32.353 | 204 | 114 | 3 | 10 | 189 | 111 | 314 | 1.47e-21 | 98.2 |
MS.gene98643.t1 | MTR_4g131580 | 35.849 | 159 | 89 | 2 | 10 | 155 | 108 | 266 | 2.78e-21 | 97.4 |
MS.gene98643.t1 | MTR_1g013180 | 35.928 | 167 | 77 | 3 | 2 | 145 | 239 | 398 | 5.93e-21 | 96.7 |
MS.gene98643.t1 | MTR_3g102590 | 34.965 | 143 | 57 | 2 | 1 | 143 | 91 | 197 | 6.23e-21 | 92.0 |
MS.gene98643.t1 | MTR_3g102600 | 31.126 | 151 | 58 | 2 | 1 | 151 | 41 | 145 | 2.27e-20 | 89.0 |
MS.gene98643.t1 | MTR_3g102600 | 31.126 | 151 | 58 | 2 | 1 | 151 | 90 | 194 | 6.06e-20 | 89.0 |
MS.gene98643.t1 | MTR_6g089050 | 61.905 | 63 | 24 | 0 | 1 | 63 | 32 | 94 | 1.34e-19 | 85.9 |
MS.gene98643.t1 | MTR_4g131570 | 32.571 | 175 | 102 | 3 | 10 | 168 | 108 | 282 | 2.10e-19 | 91.7 |
MS.gene98643.t1 | MTR_6g045327 | 33.750 | 160 | 76 | 2 | 1 | 151 | 96 | 234 | 7.32e-19 | 88.6 |
MS.gene98643.t1 | MTR_4g064730 | 42.857 | 112 | 48 | 4 | 66 | 167 | 101 | 206 | 1.04e-18 | 87.0 |
MS.gene98643.t1 | MTR_7g089010 | 49.296 | 71 | 36 | 0 | 78 | 148 | 80 | 150 | 3.06e-18 | 85.5 |
MS.gene98643.t1 | MTR_3g102590 | 33.333 | 138 | 56 | 2 | 1 | 138 | 91 | 192 | 3.80e-18 | 82.8 |
MS.gene98643.t1 | MTR_0054s0010 | 57.143 | 63 | 27 | 0 | 1 | 63 | 21 | 83 | 5.08e-17 | 79.0 |
MS.gene98643.t1 | MTR_3g102600 | 29.286 | 140 | 53 | 2 | 1 | 140 | 41 | 134 | 5.50e-16 | 75.1 |
MS.gene98643.t1 | MTR_3g102600 | 29.286 | 140 | 53 | 2 | 1 | 140 | 90 | 183 | 4.16e-15 | 73.9 |
MS.gene98643.t1 | MTR_4g078810 | 61.111 | 54 | 21 | 0 | 88 | 141 | 157 | 210 | 5.82e-15 | 77.0 |
MS.gene98643.t1 | MTR_2g090675 | 61.111 | 54 | 21 | 0 | 88 | 141 | 160 | 213 | 1.37e-14 | 75.9 |
MS.gene98643.t1 | MTR_8g105600 | 31.288 | 163 | 82 | 3 | 1 | 144 | 91 | 242 | 3.78e-14 | 75.1 |
MS.gene98643.t1 | MTR_5g014040 | 53.333 | 60 | 28 | 0 | 88 | 147 | 310 | 369 | 4.75e-14 | 74.7 |
MS.gene98643.t1 | MTR_4g098870 | 50.794 | 63 | 31 | 0 | 88 | 150 | 309 | 371 | 5.79e-14 | 74.7 |
MS.gene98643.t1 | MTR_4g098870 | 50.794 | 63 | 31 | 0 | 88 | 150 | 329 | 391 | 6.37e-14 | 74.3 |
MS.gene98643.t1 | MTR_4g098870 | 50.794 | 63 | 31 | 0 | 88 | 150 | 309 | 371 | 7.22e-14 | 74.3 |
MS.gene98643.t1 | MTR_4g098870 | 50.794 | 63 | 31 | 0 | 88 | 150 | 329 | 391 | 7.60e-14 | 74.3 |
MS.gene98643.t1 | MTR_4g098870 | 50.794 | 63 | 31 | 0 | 88 | 150 | 348 | 410 | 7.76e-14 | 74.3 |
MS.gene98643.t1 | MTR_5g014040 | 49.231 | 65 | 28 | 1 | 88 | 147 | 270 | 334 | 4.15e-12 | 68.6 |
MS.gene98643.t1 | MTR_5g014040 | 49.231 | 65 | 28 | 1 | 88 | 147 | 310 | 374 | 4.62e-12 | 68.6 |
MS.gene98643.t1 | MTR_5g041350 | 54.545 | 55 | 24 | 1 | 89 | 142 | 15 | 69 | 1.20e-11 | 66.6 |
MS.gene98643.t1 | MTR_6g032990 | 54.545 | 55 | 24 | 1 | 89 | 142 | 42 | 96 | 1.60e-11 | 66.2 |
MS.gene98643.t1 | MTR_4g086835 | 44.444 | 63 | 35 | 0 | 85 | 147 | 270 | 332 | 4.78e-11 | 65.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene98643.t1 | AT3G16857 | 36.275 | 204 | 88 | 5 | 1 | 168 | 45 | 242 | 2.13e-29 | 122 |
MS.gene98643.t1 | AT3G16857 | 36.275 | 204 | 88 | 5 | 1 | 168 | 115 | 312 | 4.40e-29 | 121 |
MS.gene98643.t1 | AT3G16857 | 36.275 | 204 | 88 | 5 | 1 | 168 | 115 | 312 | 4.53e-29 | 121 |
MS.gene98643.t1 | AT5G07210 | 36.923 | 195 | 82 | 5 | 12 | 165 | 104 | 298 | 1.73e-25 | 110 |
MS.gene98643.t1 | AT5G07210 | 36.923 | 195 | 82 | 5 | 12 | 165 | 112 | 306 | 1.97e-25 | 110 |
MS.gene98643.t1 | AT2G01760 | 37.126 | 167 | 83 | 3 | 1 | 145 | 25 | 191 | 6.22e-24 | 102 |
MS.gene98643.t1 | AT4G31920 | 34.868 | 152 | 99 | 0 | 1 | 152 | 95 | 246 | 1.96e-23 | 103 |
MS.gene98643.t1 | AT2G25180 | 37.736 | 159 | 87 | 2 | 1 | 147 | 95 | 253 | 2.44e-23 | 103 |
MS.gene98643.t1 | AT2G01760 | 37.725 | 167 | 82 | 4 | 1 | 145 | 90 | 256 | 3.38e-23 | 101 |
MS.gene98643.t1 | AT2G01760 | 37.725 | 167 | 82 | 4 | 1 | 145 | 118 | 284 | 7.48e-23 | 100 |
MS.gene98643.t1 | AT5G58080 | 35.443 | 158 | 77 | 3 | 10 | 149 | 104 | 254 | 3.57e-22 | 100 |
MS.gene98643.t1 | AT2G27070 | 34.466 | 206 | 92 | 5 | 1 | 165 | 98 | 301 | 1.70e-21 | 98.2 |
MS.gene98643.t1 | AT1G67710 | 36.158 | 177 | 92 | 5 | 1 | 156 | 15 | 191 | 3.41e-20 | 93.2 |
MS.gene98643.t1 | AT1G67710 | 36.158 | 177 | 92 | 5 | 1 | 156 | 24 | 200 | 3.45e-20 | 93.6 |
MS.gene98643.t1 | AT1G67710 | 36.158 | 177 | 92 | 5 | 1 | 156 | 89 | 265 | 6.37e-20 | 92.8 |
MS.gene98643.t1 | AT5G59570 | 38.053 | 113 | 59 | 2 | 47 | 148 | 88 | 200 | 9.99e-19 | 87.0 |
MS.gene98643.t1 | AT5G59570 | 38.053 | 113 | 59 | 2 | 47 | 148 | 88 | 200 | 9.99e-19 | 87.0 |
MS.gene98643.t1 | AT3G10760 | 47.887 | 71 | 37 | 0 | 78 | 148 | 94 | 164 | 1.54e-18 | 87.0 |
MS.gene98643.t1 | AT5G05090 | 49.275 | 69 | 35 | 0 | 77 | 145 | 69 | 137 | 3.74e-18 | 84.7 |
MS.gene98643.t1 | AT3G46640 | 49.296 | 71 | 34 | 1 | 80 | 148 | 133 | 203 | 4.23e-18 | 85.5 |
MS.gene98643.t1 | AT3G46640 | 49.296 | 71 | 34 | 1 | 80 | 148 | 133 | 203 | 4.23e-18 | 85.5 |
MS.gene98643.t1 | AT2G40970 | 50.725 | 69 | 34 | 0 | 80 | 148 | 96 | 164 | 5.01e-18 | 84.0 |
MS.gene98643.t1 | AT5G49240 | 32.484 | 157 | 83 | 3 | 1 | 138 | 120 | 272 | 5.12e-18 | 84.7 |
MS.gene98643.t1 | AT3G46640 | 49.296 | 71 | 34 | 1 | 80 | 148 | 133 | 203 | 7.87e-18 | 84.7 |
MS.gene98643.t1 | AT5G44190 | 62.295 | 61 | 21 | 1 | 81 | 141 | 141 | 199 | 1.32e-16 | 82.0 |
MS.gene98643.t1 | AT5G44190 | 62.295 | 61 | 21 | 1 | 81 | 141 | 141 | 199 | 1.35e-16 | 81.6 |
MS.gene98643.t1 | AT3G62670 | 35.526 | 152 | 87 | 5 | 1 | 141 | 117 | 268 | 2.31e-15 | 78.6 |
MS.gene98643.t1 | AT2G20570 | 59.259 | 54 | 22 | 0 | 88 | 141 | 152 | 205 | 2.43e-14 | 75.1 |
MS.gene98643.t1 | AT2G20570 | 60.784 | 51 | 20 | 0 | 91 | 141 | 171 | 221 | 1.33e-13 | 73.2 |
MS.gene98643.t1 | AT4G18020 | 54.717 | 53 | 24 | 0 | 89 | 141 | 296 | 348 | 3.22e-13 | 72.4 |
MS.gene98643.t1 | AT4G18020 | 54.717 | 53 | 24 | 0 | 89 | 141 | 296 | 348 | 3.22e-13 | 72.4 |
MS.gene98643.t1 | AT4G18020 | 54.717 | 53 | 24 | 0 | 89 | 141 | 296 | 348 | 3.22e-13 | 72.4 |
MS.gene98643.t1 | AT4G18020 | 54.717 | 53 | 24 | 0 | 89 | 141 | 296 | 348 | 3.22e-13 | 72.4 |
MS.gene98643.t1 | AT4G18020 | 54.717 | 53 | 24 | 0 | 89 | 141 | 296 | 348 | 3.22e-13 | 72.4 |
MS.gene98643.t1 | AT4G18020 | 54.717 | 53 | 24 | 0 | 89 | 141 | 296 | 348 | 3.40e-13 | 72.0 |
MS.gene98643.t1 | AT4G18020 | 54.717 | 53 | 24 | 0 | 89 | 141 | 296 | 348 | 3.40e-13 | 72.0 |
MS.gene98643.t1 | AT4G18020 | 54.717 | 53 | 24 | 0 | 89 | 141 | 296 | 348 | 3.40e-13 | 72.0 |
MS.gene98643.t1 | AT4G18020 | 54.717 | 53 | 24 | 0 | 89 | 141 | 296 | 348 | 3.40e-13 | 72.0 |
MS.gene98643.t1 | AT4G18020 | 54.717 | 53 | 24 | 0 | 89 | 141 | 296 | 348 | 3.40e-13 | 72.0 |
MS.gene98643.t1 | AT4G18020 | 54.717 | 53 | 24 | 0 | 89 | 141 | 296 | 348 | 3.40e-13 | 72.0 |
MS.gene98643.t1 | AT1G49190 | 31.548 | 168 | 90 | 6 | 1 | 146 | 112 | 276 | 7.54e-12 | 67.4 |
MS.gene98643.t1 | AT3G04450 | 52.632 | 57 | 26 | 1 | 86 | 141 | 235 | 291 | 1.27e-11 | 66.2 |
MS.gene98643.t1 | AT3G04450 | 46.479 | 71 | 31 | 2 | 86 | 149 | 235 | 305 | 1.82e-11 | 66.6 |
MS.gene98643.t1 | AT3G04450 | 46.479 | 71 | 31 | 2 | 86 | 149 | 195 | 265 | 1.90e-11 | 66.2 |
MS.gene98643.t1 | AT3G04450 | 46.479 | 71 | 31 | 2 | 86 | 149 | 195 | 265 | 1.90e-11 | 66.2 |
MS.gene98643.t1 | AT3G04030 | 52.727 | 55 | 25 | 1 | 89 | 142 | 45 | 99 | 3.16e-11 | 65.5 |
MS.gene98643.t1 | AT3G04030 | 52.727 | 55 | 25 | 1 | 89 | 142 | 45 | 99 | 3.41e-11 | 65.5 |
MS.gene98643.t1 | AT5G29000 | 40.506 | 79 | 46 | 1 | 86 | 163 | 185 | 263 | 3.70e-11 | 65.1 |
MS.gene98643.t1 | AT5G29000 | 40.506 | 79 | 46 | 1 | 86 | 163 | 185 | 263 | 3.70e-11 | 65.1 |
MS.gene98643.t1 | AT5G29000 | 44.286 | 70 | 38 | 1 | 86 | 154 | 228 | 297 | 3.70e-11 | 64.7 |
MS.gene98643.t1 | AT5G29000 | 40.506 | 79 | 46 | 1 | 86 | 163 | 228 | 306 | 3.73e-11 | 65.5 |
Find 76 sgRNAs with CRISPR-Local
Find 174 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGGATTCTATTTCAAATATT+AGG | 0.152381 | 7.2:-72914039 | MS.gene98643:CDS |
CTGAAGACTTCAAAGATATT+TGG | 0.172247 | 7.2:-72916411 | MS.gene98643:CDS |
GAACTATGAACAATGGATTA+AGG | 0.243060 | 7.2:-72914162 | MS.gene98643:CDS |
ACTTACTTTCCAATCCAATT+TGG | 0.246719 | 7.2:+72916173 | None:intergenic |
AGGATTGGCTCTTCAAGATT+TGG | 0.255717 | 7.2:-72914560 | MS.gene98643:CDS |
CTGCTTGCTATTAACCAAAT+TGG | 0.262572 | 7.2:-72916187 | MS.gene98643:CDS |
GGATTCTATTTCAAATATTA+GGG | 0.276070 | 7.2:-72914038 | MS.gene98643:CDS |
GTAAGAAACGATAATCCTTT+TGG | 0.277733 | 7.2:-72914223 | MS.gene98643:CDS |
AAATGTAGCAAGTCACTTAC+AGG | 0.277878 | 7.2:-72914988 | MS.gene98643:intron |
CAACATGATGTGTTGGAAAT+TGG | 0.289454 | 7.2:+72914605 | None:intergenic |
ATCTCAAAGACGCTAGAAAA+TGG | 0.291584 | 7.2:-72916466 | MS.gene98643:CDS |
TTTGGAATTCAGCTGAATAA+TGG | 0.295030 | 7.2:-72914205 | MS.gene98643:CDS |
CAATTCCCTTATATACAAAA+AGG | 0.300716 | 7.2:-72914580 | MS.gene98643:CDS |
TTAAGAAACAAAAGCTTGTT+TGG | 0.309580 | 7.2:-72916234 | MS.gene98643:CDS |
TTTCCTCAACATAAATTAGA+TGG | 0.318545 | 7.2:-72913947 | MS.gene98643:CDS |
TTGAAGTCTTCAGCACAAAA+AGG | 0.324880 | 7.2:+72916421 | None:intergenic |
AACAATGGATTAAGGGCTTC+TGG | 0.336654 | 7.2:-72914154 | MS.gene98643:CDS |
GGATCTTTGATAAGCACTAA+TGG | 0.346236 | 7.2:-72914271 | MS.gene98643:CDS |
AGATATTTGGAAATATGTTA+TGG | 0.355548 | 7.2:-72916398 | MS.gene98643:CDS |
CACCTCTTGTTTGATATGCC+AGG | 0.356901 | 7.2:+72914653 | None:intergenic |
AACTATGAACAATGGATTAA+GGG | 0.373260 | 7.2:-72914161 | MS.gene98643:CDS |
GGTTTGGTTCAAGGAGGGTT+TGG | 0.375726 | 7.2:-72914064 | MS.gene98643:CDS |
GGAGCAGAAATGGTTGGAAT+TGG | 0.379114 | 7.2:-72914184 | MS.gene98643:CDS |
TGCTATTAACCAAATTGGAT+TGG | 0.390260 | 7.2:-72916182 | MS.gene98643:CDS |
GGCCATGGTCAAAACAGGTT+TGG | 0.410656 | 7.2:-72914481 | MS.gene98643:CDS |
GAAAATGAGCAAAAGTATAA+TGG | 0.418138 | 7.2:-72913914 | MS.gene98643:CDS |
TAGAGGTGAACAAGGATTGA+TGG | 0.418771 | 7.2:-72914380 | MS.gene98643:CDS |
GTGTTGGAAATTGGTTGAAA+TGG | 0.423793 | 7.2:+72914614 | None:intergenic |
GGCTCTTCAAGATTTGGAAC+AGG | 0.426933 | 7.2:-72914554 | MS.gene98643:CDS |
TTACGATGATTCTTGTCATC+AGG | 0.428578 | 7.2:+72913827 | None:intergenic |
GCTGAATAATGGAGCAGAAA+TGG | 0.428747 | 7.2:-72914194 | MS.gene98643:CDS |
CTGCGAGATGTTGAAGAGAA+AGG | 0.429447 | 7.2:-72914808 | MS.gene98643:CDS |
TTCAAGATTTGGAACAGGTT+AGG | 0.432005 | 7.2:-72914549 | MS.gene98643:CDS |
CAGTGATGTCTGAAGACAAT+AGG | 0.437039 | 7.2:-72916498 | None:intergenic |
ATAATGGCCATGGTCAAAAC+AGG | 0.444362 | 7.2:-72914486 | MS.gene98643:CDS |
GGTTCAAGGAGGGTTTGGTC+TGG | 0.452214 | 7.2:-72914059 | MS.gene98643:CDS |
GATGTTGTTGCGGAGAATAA+TGG | 0.456575 | 7.2:-72914502 | MS.gene98643:CDS |
TGGTTCTACTTTCACTAATG+AGG | 0.465096 | 7.2:-72913894 | MS.gene98643:CDS |
AGCGTCTTTGAGATTAAACT+TGG | 0.469430 | 7.2:+72916475 | None:intergenic |
CTTCTTCAAGTTTCTTAACA+AGG | 0.470322 | 7.2:-72914351 | MS.gene98643:CDS |
GATTTGGAACAGGTTAGGCT+TGG | 0.482764 | 7.2:-72914544 | MS.gene98643:CDS |
TGGTGCAAATAACAATGAAA+GGG | 0.489301 | 7.2:-72914134 | MS.gene98643:CDS |
GCAGGATCAGTTAATAATGA+AGG | 0.491730 | 7.2:-72913992 | MS.gene98643:CDS |
GTTGAAGAGAAAGGAATGGT+TGG | 0.491902 | 7.2:-72914799 | MS.gene98643:CDS |
CTGGTGCAAATAACAATGAA+AGG | 0.495858 | 7.2:-72914135 | MS.gene98643:CDS |
CTTGAATATCTCTCTCTCCT+TGG | 0.495918 | 7.2:+72916260 | None:intergenic |
ACCTCTTGTTTGATATGCCA+GGG | 0.497863 | 7.2:+72914654 | None:intergenic |
TCAAATATTAGGGGAGGGAG+TGG | 0.500534 | 7.2:-72914028 | MS.gene98643:CDS |
TTTCCATCTAATTTATGTTG+AGG | 0.508389 | 7.2:+72913944 | None:intergenic |
TAGGCTTGGAAAATCAAAGT+TGG | 0.508790 | 7.2:-72914530 | MS.gene98643:CDS |
ATTTCTCTGATCACAGAACT+TGG | 0.510262 | 7.2:+72914730 | None:intergenic |
GTTTGCAAATATTGAAGTGT+TGG | 0.515294 | 7.2:+72914676 | None:intergenic |
ACATCAGAAGTAAACTTATG+AGG | 0.520784 | 7.2:+72914244 | None:intergenic |
TAAATTAGATGGAAATGTTG+TGG | 0.531191 | 7.2:-72913936 | MS.gene98643:CDS |
TTCTTCAAGTTTCTTAACAA+GGG | 0.536372 | 7.2:-72914350 | MS.gene98643:CDS |
AGCTAGTGGAAGCACCATCA+TGG | 0.545478 | 7.2:+72914413 | None:intergenic |
TTATTCAGCTGAATTCCAAA+AGG | 0.546390 | 7.2:+72914208 | None:intergenic |
AATAATGGAGCAGAAATGGT+TGG | 0.555811 | 7.2:-72914190 | MS.gene98643:CDS |
TCTATTTCAAATATTAGGGG+AGG | 0.562372 | 7.2:-72914034 | MS.gene98643:CDS |
TCTATATGATGAAAAGCTAG+TGG | 0.562508 | 7.2:+72914399 | None:intergenic |
GTTGGAAGCCGATGTTGTTG+CGG | 0.566366 | 7.2:-72914512 | MS.gene98643:CDS |
GAAGAGAAAGGAATGGTTGG+AGG | 0.566539 | 7.2:-72914796 | MS.gene98643:CDS |
AGTGGAAGAGAGTTTCTAGC+AGG | 0.567708 | 7.2:-72914010 | MS.gene98643:CDS |
CTATTTCAAATATTAGGGGA+GGG | 0.570948 | 7.2:-72914033 | MS.gene98643:CDS |
ATTATTCTCCGCAACAACAT+CGG | 0.578561 | 7.2:+72914504 | None:intergenic |
GGAATTGGAACTATGAACAA+TGG | 0.591999 | 7.2:-72914169 | MS.gene98643:CDS |
AATTGGTCAACATGATGTGT+TGG | 0.598362 | 7.2:+72914598 | None:intergenic |
TCATCATATAGAGGTGAACA+AGG | 0.599585 | 7.2:-72914388 | MS.gene98643:CDS |
AGAAAGAGTAAAGAATGCCA+AGG | 0.604346 | 7.2:-72916277 | MS.gene98643:CDS |
ACTTCAATATTTGCAAACCC+TGG | 0.607854 | 7.2:-72914671 | MS.gene98643:CDS |
GATTCTATTTCAAATATTAG+GGG | 0.624169 | 7.2:-72914037 | MS.gene98643:CDS |
ACCCTGGCATATCAAACAAG+AGG | 0.650777 | 7.2:-72914655 | MS.gene98643:CDS |
GGTGCAAATAACAATGAAAG+GGG | 0.659516 | 7.2:-72914133 | MS.gene98643:CDS |
AGATGTTGAAGAGAAAGGAA+TGG | 0.660542 | 7.2:-72914803 | MS.gene98643:CDS |
GTTGCGGAGAATAATGGCCA+TGG | 0.690083 | 7.2:-72914496 | MS.gene98643:CDS |
TGACAAGAATCATCGTAACG+AGG | 0.748080 | 7.2:-72913822 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AAAAATATTTTTCTTATGAA+AGG | - | chr7.2:72914174-72914193 | MS.gene98643:CDS | 10.0% |
!!! | ATATTATTTTAAAATGATAG+TGG | + | chr7.2:72914384-72914403 | None:intergenic | 10.0% |
!! | AATATTAAAATTGGGATAAT+AGG | + | chr7.2:72915093-72915112 | None:intergenic | 15.0% |
!! | AGTGTGTATAATATTAAAAT+TGG | + | chr7.2:72915102-72915121 | None:intergenic | 15.0% |
!! | GTGTGTATAATATTAAAATT+GGG | + | chr7.2:72915101-72915120 | None:intergenic | 15.0% |
!!! | TATTTTAATAAAAAGTGATG+TGG | + | chr7.2:72914769-72914788 | None:intergenic | 15.0% |
!! | AATTTGTAATTCAACAATGT+AGG | + | chr7.2:72915069-72915088 | None:intergenic | 20.0% |
!! | AGATATTTGGAAATATGTTA+TGG | - | chr7.2:72913918-72913937 | MS.gene98643:CDS | 20.0% |
!! | AGTGTTAAAAATTCAAACTT+TGG | - | chr7.2:72916024-72916043 | MS.gene98643:intron | 20.0% |
!! | GATTCTATTTCAAATATTAG+GGG | - | chr7.2:72916279-72916298 | MS.gene98643:CDS | 20.0% |
!! | GGATTCTATTTCAAATATTA+GGG | - | chr7.2:72916278-72916297 | MS.gene98643:CDS | 20.0% |
!! | TACACATATTACTTACAATA+TGG | + | chr7.2:72914224-72914243 | None:intergenic | 20.0% |
!! | TGGATTCTATTTCAAATATT+AGG | - | chr7.2:72916277-72916296 | MS.gene98643:CDS | 20.0% |
!!! | AATTTTTAACACTGTGATTT+TGG | + | chr7.2:72916017-72916036 | None:intergenic | 20.0% |
!!! | ATATTAGTGATCATTTTACA+TGG | - | chr7.2:72914400-72914419 | MS.gene98643:CDS | 20.0% |
!!! | ATTTTACAACCATATCATAT+GGG | - | chr7.2:72914425-72914444 | MS.gene98643:CDS | 20.0% |
!!! | TCTTTTGTGAATGAAAATTT+TGG | - | chr7.2:72916231-72916250 | MS.gene98643:CDS | 20.0% |
!!! | TTAACAAGGGATTTTAAATT+TGG | - | chr7.2:72915979-72915998 | MS.gene98643:intron | 20.0% |
!!! | TTTAATTTTGTAACCTCAAA+GGG | + | chr7.2:72914464-72914483 | None:intergenic | 20.0% |
! | AGATATACGACAAAAATTAG+AGG | + | chr7.2:72915431-72915450 | None:intergenic | 25.0% |
! | CAATTCCCTTATATACAAAA+AGG | - | chr7.2:72915736-72915755 | MS.gene98643:intron | 25.0% |
! | CAGACAATACTATAGAAAAA+TGG | + | chr7.2:72914273-72914292 | None:intergenic | 25.0% |
! | TAAATTAGATGGAAATGTTG+TGG | - | chr7.2:72916380-72916399 | MS.gene98643:CDS | 25.0% |
! | TATTGTGGAAAAAAAATTGG+TGG | - | chr7.2:72914695-72914714 | MS.gene98643:CDS | 25.0% |
! | TCCTATTGTGGAAAAAAAAT+TGG | - | chr7.2:72914692-72914711 | MS.gene98643:CDS | 25.0% |
! | TTTCCATCTAATTTATGTTG+AGG | + | chr7.2:72916375-72916394 | None:intergenic | 25.0% |
! | TTTCCTCAACATAAATTAGA+TGG | - | chr7.2:72916369-72916388 | MS.gene98643:CDS | 25.0% |
!! | ATTTAAGACCTCAAAATTGA+GGG | - | chr7.2:72914928-72914947 | MS.gene98643:intron | 25.0% |
!! | CATTTTACAACCATATCATA+TGG | - | chr7.2:72914424-72914443 | MS.gene98643:CDS | 25.0% |
!! | CCAATCCTTTTTGTATATAA+GGG | + | chr7.2:72915744-72915763 | None:intergenic | 25.0% |
!! | CTTTTTGTATATAAGGGAAT+TGG | + | chr7.2:72915738-72915757 | None:intergenic | 25.0% |
!! | GAAAATGAGCAAAAGTATAA+TGG | - | chr7.2:72916402-72916421 | MS.gene98643:CDS | 25.0% |
!! | TTAAGAAACAAAAGCTTGTT+TGG | - | chr7.2:72914082-72914101 | MS.gene98643:CDS | 25.0% |
!! | TTCTTCAAGTTTCTTAACAA+GGG | - | chr7.2:72915966-72915985 | MS.gene98643:intron | 25.0% |
!! | TTTTTGCTAGAAAAAATGGA+AGG | + | chr7.2:72915876-72915895 | None:intergenic | 25.0% |
!!! | AACTATGAACAATGGATTAA+GGG | - | chr7.2:72916155-72916174 | MS.gene98643:intron | 25.0% |
!!! | ACCAATTTTTTTTCCACAAT+AGG | + | chr7.2:72914696-72914715 | None:intergenic | 25.0% |
!!! | ATGATCTCCAGAATTTTTTT+TGG | + | chr7.2:72915284-72915303 | None:intergenic | 25.0% |
!!! | GAGTTTTTTGCTAGAAAAAA+TGG | + | chr7.2:72915880-72915899 | None:intergenic | 25.0% |
!!! | GTTTAATTTTGTAACCTCAA+AGG | + | chr7.2:72914465-72914484 | None:intergenic | 25.0% |
!!! | TCAATTTTGAGGTCTTAAAT+GGG | + | chr7.2:72914928-72914947 | None:intergenic | 25.0% |
!!! | TGTGAATGAAAATTTTGGTT+TGG | - | chr7.2:72916236-72916255 | MS.gene98643:CDS | 25.0% |
AACACCACTATCATTGTTTA+TGG | - | chr7.2:72914508-72914527 | MS.gene98643:CDS | 30.0% | |
AATAGAGATCCTCTAACAAA+GGG | + | chr7.2:72914837-72914856 | None:intergenic | 30.0% | |
ACACCACTATCATTGTTTAT+GGG | - | chr7.2:72914509-72914528 | MS.gene98643:CDS | 30.0% | |
ACATCAGAAGTAAACTTATG+AGG | + | chr7.2:72916075-72916094 | None:intergenic | 30.0% | |
ACTTACTTTCCAATCCAATT+TGG | + | chr7.2:72914146-72914165 | None:intergenic | 30.0% | |
AGTTCAAATCCCATATGATA+TGG | + | chr7.2:72914437-72914456 | None:intergenic | 30.0% | |
ATTAGGTACCATGTCTTAAA+TGG | + | chr7.2:72914666-72914685 | None:intergenic | 30.0% | |
CAAGTATGTTGCATTAATAG+CGG | + | chr7.2:72914322-72914341 | None:intergenic | 30.0% | |
CCCTTATATACAAAAAGGAT+TGG | - | chr7.2:72915741-72915760 | MS.gene98643:intron | 30.0% | |
CTATTTCAAATATTAGGGGA+GGG | - | chr7.2:72916283-72916302 | MS.gene98643:CDS | 30.0% | |
CTGAAGACTTCAAAGATATT+TGG | - | chr7.2:72913905-72913924 | MS.gene98643:CDS | 30.0% | |
GTTTGCAAATATTGAAGTGT+TGG | + | chr7.2:72915643-72915662 | None:intergenic | 30.0% | |
TACTTCTTCCAACCATAAAT+CGG | - | chr7.2:72914242-72914261 | MS.gene98643:CDS | 30.0% | |
TCTATATGATGAAAAGCTAG+TGG | + | chr7.2:72915920-72915939 | None:intergenic | 30.0% | |
TCTATTTCAAATATTAGGGG+AGG | - | chr7.2:72916282-72916301 | MS.gene98643:CDS | 30.0% | |
TGCTATTAACCAAATTGGAT+TGG | - | chr7.2:72914134-72914153 | MS.gene98643:CDS | 30.0% | |
TGGTGCAAATAACAATGAAA+GGG | - | chr7.2:72916182-72916201 | MS.gene98643:CDS | 30.0% | |
TTATTCAGCTGAATTCCAAA+AGG | + | chr7.2:72916111-72916130 | None:intergenic | 30.0% | |
! | AGAAACATTTTGTGGAGATA+AGG | + | chr7.2:72914111-72914130 | None:intergenic | 30.0% |
! | ATATTTTCTCCCTAATTCAG+AGG | - | chr7.2:72915253-72915272 | MS.gene98643:intron | 30.0% |
! | CATTTAAGACCTCAAAATTG+AGG | - | chr7.2:72914927-72914946 | MS.gene98643:intron | 30.0% |
! | CTTCTTCAAGTTTCTTAACA+AGG | - | chr7.2:72915965-72915984 | MS.gene98643:intron | 30.0% |
! | GCCAATCCTTTTTGTATATA+AGG | + | chr7.2:72915745-72915764 | None:intergenic | 30.0% |
! | GTAAGAAACGATAATCCTTT+TGG | - | chr7.2:72916093-72916112 | MS.gene98643:intron | 30.0% |
! | TAATTACAGAGCATCTACAA+TGG | - | chr7.2:72914629-72914648 | MS.gene98643:CDS | 30.0% |
! | TTTAAGACATGGTACCTAAT+AGG | - | chr7.2:72914666-72914685 | MS.gene98643:CDS | 30.0% |
! | TTTGGAATTCAGCTGAATAA+TGG | - | chr7.2:72916111-72916130 | MS.gene98643:intron | 30.0% |
!! | GAACTATGAACAATGGATTA+AGG | - | chr7.2:72916154-72916173 | MS.gene98643:intron | 30.0% |
!!! | ACTAGCTTTTCATCATATAG+AGG | - | chr7.2:72915919-72915938 | MS.gene98643:intron | 30.0% |
!!! | CTCAATTTTGAGGTCTTAAA+TGG | + | chr7.2:72914929-72914948 | None:intergenic | 30.0% |
!!! | GAAAATTTTGGTTTGGTTCA+AGG | - | chr7.2:72916243-72916262 | MS.gene98643:CDS | 30.0% |
AAAAAGTGATGTGTCCATGT+GGG | - | chr7.2:72914901-72914920 | MS.gene98643:intron | 35.0% | |
AAATGTAGCAAGTCACTTAC+AGG | - | chr7.2:72915328-72915347 | MS.gene98643:intron | 35.0% | |
AAGCCCATAAACAATGATAG+TGG | + | chr7.2:72914515-72914534 | None:intergenic | 35.0% | |
AATTGGTCAACATGATGTGT+TGG | + | chr7.2:72915721-72915740 | None:intergenic | 35.0% | |
ACTTCAATATTTGCAAACCC+TGG | - | chr7.2:72915645-72915664 | MS.gene98643:intron | 35.0% | |
AGAAAGAGTAAAGAATGCCA+AGG | - | chr7.2:72914039-72914058 | MS.gene98643:CDS | 35.0% | |
AGATGTTGAAGAGAAAGGAA+TGG | - | chr7.2:72915513-72915532 | MS.gene98643:intron | 35.0% | |
ATCTCAAAGACGCTAGAAAA+TGG | - | chr7.2:72913850-72913869 | MS.gene98643:CDS | 35.0% | |
ATGTGGACCCATTTAAGAAT+GGG | + | chr7.2:72914752-72914771 | None:intergenic | 35.0% | |
ATTATTCTCCGCAACAACAT+CGG | + | chr7.2:72915815-72915834 | None:intergenic | 35.0% | |
ATTTCTCTGATCACAGAACT+TGG | + | chr7.2:72915589-72915608 | None:intergenic | 35.0% | |
ATTTGAACTTCTTCCCTTTG+AGG | - | chr7.2:72914448-72914467 | MS.gene98643:CDS | 35.0% | |
CAACATGATGTGTTGGAAAT+TGG | + | chr7.2:72915714-72915733 | None:intergenic | 35.0% | |
CAATAGAGATCCTCTAACAA+AGG | + | chr7.2:72914838-72914857 | None:intergenic | 35.0% | |
CTCTAACAAAGGGTCTAATA+GGG | + | chr7.2:72914827-72914846 | None:intergenic | 35.0% | |
CTGGTGCAAATAACAATGAA+AGG | - | chr7.2:72916181-72916200 | MS.gene98643:CDS | 35.0% | |
CTTTGTTAGAGGATCTCTAT+TGG | - | chr7.2:72914836-72914855 | MS.gene98643:intron | 35.0% | |
GCAAAAAACTCATTCCATGA+TGG | - | chr7.2:72915889-72915908 | MS.gene98643:intron | 35.0% | |
GCAGGATCAGTTAATAATGA+AGG | - | chr7.2:72916324-72916343 | MS.gene98643:CDS | 35.0% | |
GGAATTGGAACTATGAACAA+TGG | - | chr7.2:72916147-72916166 | MS.gene98643:intron | 35.0% | |
GGATCTTTGATAAGCACTAA+TGG | - | chr7.2:72916045-72916064 | MS.gene98643:intron | 35.0% | |
GGCTGTTCCAAAAAAAATTC+TGG | - | chr7.2:72915274-72915293 | MS.gene98643:intron | 35.0% | |
GGTGCAAATAACAATGAAAG+GGG | - | chr7.2:72916183-72916202 | MS.gene98643:CDS | 35.0% | |
GTGTTGGAAATTGGTTGAAA+TGG | + | chr7.2:72915705-72915724 | None:intergenic | 35.0% | |
TAAAAAGTGATGTGTCCATG+TGG | - | chr7.2:72914900-72914919 | MS.gene98643:intron | 35.0% | |
TAAGACCCCCATTCTTAAAT+GGG | - | chr7.2:72914742-72914761 | MS.gene98643:CDS | 35.0% | |
TACCCCTAAAATTAAGCTGT+TGG | - | chr7.2:72915136-72915155 | MS.gene98643:intron | 35.0% | |
TAGGCTTGGAAAATCAAAGT+TGG | - | chr7.2:72915786-72915805 | MS.gene98643:intron | 35.0% | |
TATCCCTTTCAAACTCAAGT+GGG | - | chr7.2:72914973-72914992 | MS.gene98643:intron | 35.0% | |
TCATCATATAGAGGTGAACA+AGG | - | chr7.2:72915928-72915947 | MS.gene98643:intron | 35.0% | |
TTAAGACCCCCATTCTTAAA+TGG | - | chr7.2:72914741-72914760 | MS.gene98643:CDS | 35.0% | |
TTACGATGATTCTTGTCATC+AGG | + | chr7.2:72916492-72916511 | None:intergenic | 35.0% | |
TTGAAGTCTTCAGCACAAAA+AGG | + | chr7.2:72913898-72913917 | None:intergenic | 35.0% | |
! | AATAATGGAGCAGAAATGGT+TGG | - | chr7.2:72916126-72916145 | MS.gene98643:intron | 35.0% |
! | AGAGCCAACAGCTTAATTTT+AGG | + | chr7.2:72915143-72915162 | None:intergenic | 35.0% |
! | AGCCAACAGCTTAATTTTAG+GGG | + | chr7.2:72915141-72915160 | None:intergenic | 35.0% |
! | CAATGCTTCTTTTCGTTCTT+AGG | + | chr7.2:72914015-72914034 | None:intergenic | 35.0% |
! | CTAAGATCAAGTTTTGCATC+AGG | - | chr7.2:72915559-72915578 | MS.gene98643:intron | 35.0% |
! | GAGCCAACAGCTTAATTTTA+GGG | + | chr7.2:72915142-72915161 | None:intergenic | 35.0% |
! | TAGCAAGCAGAAACATTTTG+TGG | + | chr7.2:72914119-72914138 | None:intergenic | 35.0% |
! | TGGTTCTACTTTCACTAATG+AGG | - | chr7.2:72916422-72916441 | MS.gene98643:CDS | 35.0% |
! | TTCAAGATTTGGAACAGGTT+AGG | - | chr7.2:72915767-72915786 | MS.gene98643:intron | 35.0% |
!! | AGCGTCTTTGAGATTAAACT+TGG | + | chr7.2:72913844-72913863 | None:intergenic | 35.0% |
!! | CTGCTTGCTATTAACCAAAT+TGG | - | chr7.2:72914129-72914148 | MS.gene98643:CDS | 35.0% |
!!! | AATTTTGGTTTGGTTCAAGG+AGG | - | chr7.2:72916246-72916265 | MS.gene98643:CDS | 35.0% |
!!! | ATTTTGGTTTGGTTCAAGGA+GGG | - | chr7.2:72916247-72916266 | MS.gene98643:CDS | 35.0% |
AAAATTGAGGGTCTCCATTG+TGG | - | chr7.2:72914940-72914959 | MS.gene98643:intron | 40.0% | |
ACACCCACTTGAGTTTGAAA+GGG | + | chr7.2:72914979-72914998 | None:intergenic | 40.0% | |
ATAATGGCCATGGTCAAAAC+AGG | - | chr7.2:72915830-72915849 | MS.gene98643:intron | 40.0% | |
CCACAATAGGAGAACCTATT+AGG | + | chr7.2:72914683-72914702 | None:intergenic | 40.0% | |
CCTAATAGGTTCTCCTATTG+TGG | - | chr7.2:72914680-72914699 | MS.gene98643:CDS | 40.0% | |
CCTATTAGACCCTTTGTTAG+AGG | - | chr7.2:72914825-72914844 | MS.gene98643:CDS | 40.0% | |
CCTCTAACAAAGGGTCTAAT+AGG | + | chr7.2:72914828-72914847 | None:intergenic | 40.0% | |
CTTGAATATCTCTCTCTCCT+TGG | + | chr7.2:72914059-72914078 | None:intergenic | 40.0% | |
GATGTGGACCCATTTAAGAA+TGG | + | chr7.2:72914753-72914772 | None:intergenic | 40.0% | |
GATGTTGTTGCGGAGAATAA+TGG | - | chr7.2:72915814-72915833 | MS.gene98643:intron | 40.0% | |
GTATCCCTTTCAAACTCAAG+TGG | - | chr7.2:72914972-72914991 | MS.gene98643:intron | 40.0% | |
GTTGAAGAGAAAGGAATGGT+TGG | - | chr7.2:72915517-72915536 | MS.gene98643:intron | 40.0% | |
TAGAGGTGAACAAGGATTGA+TGG | - | chr7.2:72915936-72915955 | MS.gene98643:intron | 40.0% | |
TGTGGACCCATTTAAGAATG+GGG | + | chr7.2:72914751-72914770 | None:intergenic | 40.0% | |
TGTTTGTGCACTAGCTAACT+GGG | + | chr7.2:72914492-72914511 | None:intergenic | 40.0% | |
TTAGAGGATCTCTATTGGAG+TGG | - | chr7.2:72914841-72914860 | MS.gene98643:intron | 40.0% | |
TTGGAACAGCCTCTGAATTA+GGG | + | chr7.2:72915265-72915284 | None:intergenic | 40.0% | |
! | AAAATGGTGCAGCCGATTTA+TGG | + | chr7.2:72914257-72914276 | None:intergenic | 40.0% |
! | AATGGAGACCCTCAATTTTG+AGG | + | chr7.2:72914939-72914958 | None:intergenic | 40.0% |
! | ACATTTTCTCTGGTCAGGTT+TGG | + | chr7.2:72915314-72915333 | None:intergenic | 40.0% |
! | ACCTCTTGTTTGATATGCCA+GGG | + | chr7.2:72915665-72915684 | None:intergenic | 40.0% |
! | GCTGAATAATGGAGCAGAAA+TGG | - | chr7.2:72916122-72916141 | MS.gene98643:intron | 40.0% |
! | GGTCTTCACCATTTAAGACA+TGG | - | chr7.2:72914655-72914674 | MS.gene98643:CDS | 40.0% |
! | TGGTGGTCTTAAAAGATCCA+AGG | - | chr7.2:72914712-72914731 | MS.gene98643:CDS | 40.0% |
! | TTGCTACATTTTCTCTGGTC+AGG | + | chr7.2:72915319-72915338 | None:intergenic | 40.0% |
! | TTTGGAACAGCCTCTGAATT+AGG | + | chr7.2:72915266-72915285 | None:intergenic | 40.0% |
!! | AACAATGGATTAAGGGCTTC+TGG | - | chr7.2:72916162-72916181 | MS.gene98643:intron | 40.0% |
!! | AGGATTGGCTCTTCAAGATT+TGG | - | chr7.2:72915756-72915775 | MS.gene98643:intron | 40.0% |
!! | GATACTAAGAGCATCCACAA+TGG | + | chr7.2:72914957-72914976 | None:intergenic | 40.0% |
!!! | GTGACTTGCTACATTTTCTC+TGG | + | chr7.2:72915324-72915343 | None:intergenic | 40.0% |
!!! | TTCCAAACCTGTTTTGACCA+TGG | + | chr7.2:72915840-72915859 | None:intergenic | 40.0% |
ACCCTGGCATATCAAACAAG+AGG | - | chr7.2:72915661-72915680 | MS.gene98643:intron | 45.0% | |
CACACCCACTTGAGTTTGAA+AGG | + | chr7.2:72914980-72914999 | None:intergenic | 45.0% | |
CTGCGAGATGTTGAAGAGAA+AGG | - | chr7.2:72915508-72915527 | MS.gene98643:intron | 45.0% | |
GAAGAGAAAGGAATGGTTGG+AGG | - | chr7.2:72915520-72915539 | MS.gene98643:intron | 45.0% | |
GGAGCAGAAATGGTTGGAAT+TGG | - | chr7.2:72916132-72916151 | MS.gene98643:intron | 45.0% | |
GTGGACCCATTTAAGAATGG+GGG | + | chr7.2:72914750-72914769 | None:intergenic | 45.0% | |
GTGTTTGTGCACTAGCTAAC+TGG | + | chr7.2:72914493-72914512 | None:intergenic | 45.0% | |
TCAAATATTAGGGGAGGGAG+TGG | - | chr7.2:72916288-72916307 | MS.gene98643:CDS | 45.0% | |
! | ACAGAGCATCTACAATGGTG+AGG | - | chr7.2:72914634-72914653 | MS.gene98643:CDS | 45.0% |
! | CACCTCTTGTTTGATATGCC+AGG | + | chr7.2:72915666-72915685 | None:intergenic | 45.0% |
! | GATTTGGAACAGGTTAGGCT+TGG | - | chr7.2:72915772-72915791 | MS.gene98643:intron | 45.0% |
! | GGCTCTTCAAGATTTGGAAC+AGG | - | chr7.2:72915762-72915781 | MS.gene98643:intron | 45.0% |
!! | AGTGGAAGAGAGTTTCTAGC+AGG | - | chr7.2:72916306-72916325 | MS.gene98643:CDS | 45.0% |
!!! | TATTAAAATAATAATTTTCA+TGG | - | chr7.2:72914779-72914798 | MS.gene98643:CDS | 5.0% |
!!! | TTTTAATAATAGTAATTAAT+AGG | + | chr7.2:72914874-72914893 | None:intergenic | 5.0% |
GGCCATGGTCAAAACAGGTT+TGG | - | chr7.2:72915835-72915854 | MS.gene98643:intron | 50.0% | |
GGGGGTCTTAAGTTAGACCT+TGG | + | chr7.2:72914732-72914751 | None:intergenic | 50.0% | |
GGTCTTAAATGGGTCCCACA+TGG | + | chr7.2:72914918-72914937 | None:intergenic | 50.0% | |
GTTGCGGAGAATAATGGCCA+TGG | - | chr7.2:72915820-72915839 | MS.gene98643:intron | 50.0% | |
GTTGGAAGCCGATGTTGTTG+CGG | - | chr7.2:72915804-72915823 | MS.gene98643:intron | 50.0% | |
! | GGTTTGGTTCAAGGAGGGTT+TGG | - | chr7.2:72916252-72916271 | MS.gene98643:CDS | 50.0% |
! | TGGTGCAGCCGATTTATGGT+TGG | + | chr7.2:72914253-72914272 | None:intergenic | 50.0% |
!! | AGCTAGTGGAAGCACCATCA+TGG | + | chr7.2:72915906-72915925 | None:intergenic | 50.0% |
! | GGTTCAAGGAGGGTTTGGTC+TGG | - | chr7.2:72916257-72916276 | MS.gene98643:CDS | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.2 | gene | 72913823 | 72916515 | 72913823 | ID=MS.gene98643 |
chr7.2 | mRNA | 72913823 | 72916515 | 72913823 | ID=MS.gene98643.t1;Parent=MS.gene98643 |
chr7.2 | exon | 72916179 | 72916515 | 72916179 | ID=MS.gene98643.t1.exon1;Parent=MS.gene98643.t1 |
chr7.2 | CDS | 72916179 | 72916515 | 72916179 | ID=cds.MS.gene98643.t1;Parent=MS.gene98643.t1 |
chr7.2 | exon | 72914989 | 72915065 | 72914989 | ID=MS.gene98643.t1.exon2;Parent=MS.gene98643.t1 |
chr7.2 | CDS | 72914989 | 72915065 | 72914989 | ID=cds.MS.gene98643.t1;Parent=MS.gene98643.t1 |
chr7.2 | exon | 72913823 | 72914845 | 72913823 | ID=MS.gene98643.t1.exon3;Parent=MS.gene98643.t1 |
chr7.2 | CDS | 72913823 | 72914845 | 72913823 | ID=cds.MS.gene98643.t1;Parent=MS.gene98643.t1 |
Gene Sequence |
Protein sequence |