AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene99037

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene99037.t1 MTR_5g030770 92.977 299 9 2 11 297 27 325 0.0 558
MS.gene99037.t1 MTR_5g030770 90.970 299 9 3 11 297 27 319 0.0 525
MS.gene99037.t1 MTR_7g076840 72.285 267 15 6 11 277 24 231 1.47e-111 323
MS.gene99037.t1 MTR_3g111290 58.397 262 87 10 54 297 80 337 1.18e-82 253
MS.gene99037.t1 MTR_3g498695 45.098 204 72 8 124 294 287 483 1.72e-36 136
MS.gene99037.t1 MTR_3g498695 44.828 203 73 8 124 294 287 482 5.48e-36 135
MS.gene99037.t1 MTR_7g083900 43.299 194 71 6 136 294 284 473 7.34e-36 134
MS.gene99037.t1 MTR_7g083900 42.564 195 72 6 136 294 284 474 1.41e-35 133
MS.gene99037.t1 MTR_7g065690 48.649 148 36 6 14 161 26 133 2.59e-32 116
MS.gene99037.t1 MTR_3g030700 37.696 191 90 4 123 288 184 370 4.27e-29 114
MS.gene99037.t1 MTR_2g081040 36.022 186 90 5 136 292 175 360 5.14e-27 108
MS.gene99037.t1 MTR_3g104100 36.813 182 86 4 136 288 193 374 5.95e-27 108
MS.gene99037.t1 MTR_1g112680 25.234 214 102 5 126 287 305 512 3.23e-15 76.3
MS.gene99037.t1 MTR_5g030430 27.807 187 103 5 135 291 490 674 1.47e-14 74.3
MS.gene99037.t1 MTR_2g084280 30.233 172 99 4 131 283 126 295 4.59e-14 71.6
MS.gene99037.t1 MTR_1g072320 30.409 171 86 4 122 260 449 618 9.18e-13 68.9
MS.gene99037.t1 MTR_2g038040 30.380 158 78 3 134 259 48 205 1.29e-12 66.6
MS.gene99037.t1 MTR_4g057270 46.154 65 35 0 137 201 148 212 1.98e-12 67.0
MS.gene99037.t1 MTR_8g024790 30.508 177 93 6 136 290 289 457 2.12e-12 67.4
MS.gene99037.t1 MTR_5g014640 25.543 184 117 3 124 287 140 323 4.82e-12 65.9
MS.gene99037.t1 MTR_8g064700 26.000 200 110 6 122 288 222 416 2.20e-11 64.3
MS.gene99037.t1 MTR_5g014520 29.801 151 87 2 129 260 148 298 7.41e-11 62.4
MS.gene99037.t1 MTR_4g092700 22.260 292 180 10 16 286 60 325 8.21e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene99037.t1 AT5G65640 64.677 201 55 2 113 297 151 351 2.52e-77 239
MS.gene99037.t1 AT5G10570 47.249 309 115 8 15 297 29 315 2.81e-69 218
MS.gene99037.t1 AT1G12860 43.478 184 79 3 136 294 265 448 6.08e-36 134
MS.gene99037.t1 AT3G26744 44.271 192 70 5 136 294 305 492 8.43e-36 134
MS.gene99037.t1 AT3G26744 44.271 192 70 5 136 294 305 492 8.43e-36 134
MS.gene99037.t1 AT3G26744 44.271 192 70 5 136 294 305 492 8.43e-36 134
MS.gene99037.t1 AT1G12860 46.405 153 57 3 136 263 265 417 3.73e-32 123
MS.gene99037.t1 AT3G26744 45.860 157 56 2 136 263 305 461 1.55e-31 122
MS.gene99037.t1 AT5G65640 60.163 123 32 3 113 219 151 272 1.85e-30 116
MS.gene99037.t1 AT2G16910 33.168 202 88 7 137 293 313 512 4.88e-17 81.6
MS.gene99037.t1 AT4G09820 31.288 163 107 4 127 288 352 510 4.08e-16 79.0
MS.gene99037.t1 AT4G29930 32.117 137 74 2 137 258 53 185 5.63e-15 73.2
MS.gene99037.t1 AT2G46510 37.500 96 59 1 135 229 392 487 6.68e-15 75.1
MS.gene99037.t1 AT4G29930 35.000 140 69 3 137 258 53 188 7.42e-15 72.8
MS.gene99037.t1 AT4G29930 32.117 137 74 2 137 258 53 185 1.17e-14 72.4
MS.gene99037.t1 AT5G46760 29.670 182 99 6 135 291 412 589 8.38e-14 72.0
MS.gene99037.t1 AT4G29930 44.595 74 37 1 137 210 53 122 1.58e-13 68.2
MS.gene99037.t1 AT4G29930 44.595 74 37 1 137 210 53 122 4.13e-13 68.2
MS.gene99037.t1 AT4G29930 44.595 74 37 1 137 210 53 122 7.14e-13 67.8
MS.gene99037.t1 AT4G29930 44.595 74 37 1 137 210 53 122 7.14e-13 67.8
MS.gene99037.t1 AT4G17880 26.582 158 97 1 135 273 413 570 2.84e-12 67.4
MS.gene99037.t1 AT2G28160 40.506 79 42 1 123 201 121 194 3.84e-12 66.2
MS.gene99037.t1 AT2G28160 40.506 79 42 1 123 201 121 194 4.27e-12 65.9

Find 62 sgRNAs with CRISPR-Local

Find 103 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAATCACCTTGCTGATCTT+AGG 0.222682 4.1:+74034431 None:intergenic
AGGCTGTCCTTCAACCCTTT+TGG 0.223211 4.1:+74034529 None:intergenic
AGTGATTGCTTTATCTCTTC+AGG 0.235636 4.1:+74033284 None:intergenic
CATAGATTTGAATGTCCTTA+TGG 0.286074 4.1:-74034773 MS.gene99037:CDS
ACAAATCAGATAAACCTTTC+AGG 0.295093 4.1:-74034046 MS.gene99037:CDS
AAACCTTTCAGGAATTTCTA+AGG 0.299341 4.1:-74034035 MS.gene99037:CDS
TTTACCACAACAAGAAAGTA+TGG 0.308343 4.1:-74034681 MS.gene99037:CDS
TTCCCATGTGTTTAGGTAGA+TGG 0.318517 4.1:-74033326 MS.gene99037:intron
TCATCATACCCTTATCTTGA+TGG 0.320494 4.1:-74034740 MS.gene99037:CDS
CTTTCTTGTTGTGGTAAAAC+TGG 0.323789 4.1:+74034686 None:intergenic
AGATAAAGCAATCACTATTC+AGG 0.330105 4.1:-74033277 MS.gene99037:CDS
TTTCTTACCATTACTTCATT+TGG 0.330225 4.1:+74034004 None:intergenic
CAAGAAAGTATGGAAGAGTT+TGG 0.335442 4.1:-74034671 MS.gene99037:CDS
GAGTCAAAGGTCCAACCATT+AGG 0.336189 4.1:+74034866 None:intergenic
ACAGCCTTCAAAGAATCTTA+TGG 0.358273 4.1:-74034513 MS.gene99037:CDS
ATGGAAGAGTTTGGATTTGT+TGG 0.361028 4.1:-74034662 MS.gene99037:CDS
CATTCAAATCTATGGTCTAA+TGG 0.372381 4.1:+74034782 None:intergenic
CAGTAACAATCCTGGCTTTG+TGG 0.397442 4.1:+74033829 None:intergenic
GAATCACCTTGCTGATCTTA+GGG 0.398992 4.1:+74034432 None:intergenic
CATAAGGACATTCAAATCTA+TGG 0.410090 4.1:+74034774 None:intergenic
ATGGACAGGACATCAATTCT+AGG 0.415879 4.1:-74034142 MS.gene99037:CDS
ATCTGCTGTGCCACAAAGCC+AGG 0.421676 4.1:-74033839 MS.gene99037:CDS
GCAAATGAAGGGTTTAAAGA+TGG 0.426120 4.1:+74034818 None:intergenic
CTATTCAGGAATGCAGGTTA+TGG 0.429722 4.1:-74033263 MS.gene99037:CDS
GTGATTGCTTTATCTCTTCA+GGG 0.432133 4.1:+74033285 None:intergenic
GAAGAAAGCGTTTGAATGAC+AGG 0.437266 4.1:-74034478 MS.gene99037:CDS
TCATCCATAAGATTCTTTGA+AGG 0.448575 4.1:+74034509 None:intergenic
AGTCAAAGGTCCAACCATTA+GGG 0.456761 4.1:+74034867 None:intergenic
AGTGAGTTACTACTCCCTAA+TGG 0.457706 4.1:-74034881 MS.gene99037:CDS
ATGACAGGCTTTCCATGCTT+AGG 0.479470 4.1:-74034463 MS.gene99037:CDS
GCCAAATCCAAAAGGGTTGA+AGG 0.482278 4.1:-74034536 MS.gene99037:CDS
ACTGAGAATCCATCAAGATA+AGG 0.498561 4.1:+74034731 None:intergenic
CTGAGAATCCATCAAGATAA+GGG 0.499837 4.1:+74034732 None:intergenic
ACATGAAAGAGCTTCTAGAA+AGG 0.506584 4.1:-74034105 MS.gene99037:CDS
AGATACTGATTCTTGTGTCC+TGG 0.512516 4.1:+74033858 None:intergenic
TCTTCCATACTTTCTTGTTG+TGG 0.521400 4.1:+74034677 None:intergenic
ACATGGAATACTTTATCCAC+TGG 0.522465 4.1:-74034916 MS.gene99037:CDS
CAATCACTATTCAGGAATGC+AGG 0.523750 4.1:-74033269 MS.gene99037:CDS
TTCAGGAATGCAGGTTATGG+TGG 0.533157 4.1:-74033260 MS.gene99037:CDS
ATTAAAGCCAAATGAAGTAA+TGG 0.533491 4.1:-74034011 MS.gene99037:CDS
TGATGTTGAGCGGAGAGACC+AGG 0.534371 4.1:-74033876 MS.gene99037:CDS
AGAATCTTATGGATGAAAGA+AGG 0.538180 4.1:-74034502 MS.gene99037:CDS
GATGATGCATCAGTTCCATA+AGG 0.540398 4.1:+74034758 None:intergenic
TTGTTGGAAGTGAGAACAAG+AGG 0.555475 4.1:-74034646 MS.gene99037:CDS
ATTGCAAGAATCTTGCTCAA+AGG 0.560414 4.1:-74033732 MS.gene99037:intron
CACTAACTCGTTCAAACCAG+TGG 0.566928 4.1:+74034900 None:intergenic
GTGAACACATTAGAAGCATT+AGG 0.568569 4.1:-74033800 MS.gene99037:CDS
ACTGTTGACAGTAACAATCC+TGG 0.569200 4.1:+74033821 None:intergenic
TTATGGTGGGAGATGTCTCT+AGG 0.570179 4.1:-74033246 None:intergenic
ATTCCTTAGAAATTCCTGAA+AGG 0.577724 4.1:+74034032 None:intergenic
GTTGAGAATGAAGCAAATGA+AGG 0.578645 4.1:+74034806 None:intergenic
TAAAATCAGCTGCAAAGTTG+AGG 0.582223 4.1:-74034612 MS.gene99037:CDS
AGTTACTACTCCCTAATGGT+TGG 0.595993 4.1:-74034877 MS.gene99037:CDS
TAACACACTGGTGAATCTCA+AGG 0.606173 4.1:+74033777 None:intergenic
TCAGGAATGCAGGTTATGGT+GGG 0.610095 4.1:-74033259 MS.gene99037:CDS
TTGAGAATGAAGCAAATGAA+GGG 0.614806 4.1:+74034807 None:intergenic
AATGGTAAGAAATTCCCCTA+AGG 0.619045 4.1:-74033993 MS.gene99037:intron
TGAAACTGCTTATAACACAC+TGG 0.622427 4.1:+74033765 None:intergenic
GGTGCTGAATCATCAAACTC+AGG 0.624297 4.1:+74034707 None:intergenic
AGGGACAATTGACCTAAGCA+TGG 0.627542 4.1:+74034451 None:intergenic
GGAACTAAACCATACCTTAG+GGG 0.677566 4.1:+74033979 None:intergenic
AATTGTCCCTAAGATCAGCA+AGG 0.709185 4.1:-74034438 MS.gene99037:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTCTGAATAAATTTAATTAA+TGG - chr4.1:74034237-74034256 MS.gene99037:intron 10.0%
!! ATTAAATTTATTCAGAAACT+TGG + chr4.1:74034234-74034253 None:intergenic 15.0%
!!! AAAATGTAAATTTTGTAAGA+TGG - chr4.1:74034000-74034019 MS.gene99037:CDS 15.0%
!! ATAATTGATCATGAAAAGTT+TGG - chr4.1:74034557-74034576 MS.gene99037:CDS 20.0%
!! TAGTAAGTTACAATAAGAAA+TGG - chr4.1:74034081-74034100 MS.gene99037:intron 20.0%
!!! ATGTATGTGTGTTTTATTTT+TGG - chr4.1:74033882-74033901 MS.gene99037:intron 20.0%
! AAATTGTATTACTGCATGTT+CGG - chr4.1:74034457-74034476 MS.gene99037:CDS 25.0%
! AATCGAATGTAATAAATTCC+TGG + chr4.1:74034673-74034692 None:intergenic 25.0%
! ATTAAAGCCAAATGAAGTAA+TGG - chr4.1:74034150-74034169 MS.gene99037:intron 25.0%
! GATTATGCATTAATTCTTCA+AGG + chr4.1:74034206-74034225 None:intergenic 25.0%
! TAAGTTACAATAAGAAATGG+AGG - chr4.1:74034084-74034103 MS.gene99037:intron 25.0%
! TTTAACCATGCAAACAATTA+TGG + chr4.1:74034782-74034801 None:intergenic 25.0%
! TTTCTTACCATTACTTCATT+TGG + chr4.1:74034160-74034179 None:intergenic 25.0%
!! ATTTTCATCAAATGAGTCAA+AGG + chr4.1:74033311-74033330 None:intergenic 25.0%
!! TCTATAATTAATTTTTCGCC+AGG - chr4.1:74034652-74034671 MS.gene99037:CDS 25.0%
!!! AAGCGTAGTTTTTAGTAAAA+TGG + chr4.1:74034521-74034540 None:intergenic 25.0%
AAACCTTTCAGGAATTTCTA+AGG - chr4.1:74034126-74034145 MS.gene99037:CDS 30.0%
AATTGACTAGCACTTGTATT+TGG - chr4.1:74033940-74033959 MS.gene99037:intron 30.0%
ACAAATCAGATAAACCTTTC+AGG - chr4.1:74034115-74034134 MS.gene99037:CDS 30.0%
AGAAAAAAGCCAAATCCAAA+AGG - chr4.1:74033617-74033636 MS.gene99037:intron 30.0%
AGAATCTTATGGATGAAAGA+AGG - chr4.1:74033659-74033678 MS.gene99037:intron 30.0%
AGATAAAGCAATCACTATTC+AGG - chr4.1:74034884-74034903 MS.gene99037:CDS 30.0%
ATTCCTTAGAAATTCCTGAA+AGG + chr4.1:74034132-74034151 None:intergenic 30.0%
CATAAGGACATTCAAATCTA+TGG + chr4.1:74033390-74033409 None:intergenic 30.0%
CATAGATTTGAATGTCCTTA+TGG - chr4.1:74033388-74033407 MS.gene99037:intron 30.0%
CATATTATTCCCATGTGTTT+AGG - chr4.1:74034828-74034847 MS.gene99037:CDS 30.0%
CATTCAAATCTATGGTCTAA+TGG + chr4.1:74033382-74033401 None:intergenic 30.0%
GAAAAAAGCCAAATCCAAAA+GGG - chr4.1:74033618-74033637 MS.gene99037:intron 30.0%
TAGTCAATTGTAGTCAATGA+AGG + chr4.1:74033929-74033948 None:intergenic 30.0%
TCATCCATAAGATTCTTTGA+AGG + chr4.1:74033655-74033674 None:intergenic 30.0%
TTGAGAATGAAGCAAATGAA+GGG + chr4.1:74033357-74033376 None:intergenic 30.0%
TTTACCACAACAAGAAAGTA+TGG - chr4.1:74033480-74033499 MS.gene99037:intron 30.0%
! ATATCTTCAATCTGAAGTGT+CGG + chr4.1:74033808-74033827 None:intergenic 30.0%
! GAAACTCCAGTTTTTAACAT+GGG - chr4.1:74033583-74033602 MS.gene99037:intron 30.0%
! GTAAATTTTGTAAGATGGAC+AGG - chr4.1:74034005-74034024 MS.gene99037:CDS 30.0%
! TGAAACTCCAGTTTTTAACA+TGG - chr4.1:74033582-74033601 MS.gene99037:intron 30.0%
!! TTTTTCAGTTTGATGTTGAG+CGG - chr4.1:74034275-74034294 MS.gene99037:intron 30.0%
!!! CAGTTATTCTTTTTTGTGTC+TGG - chr4.1:74033831-74033850 MS.gene99037:CDS 30.0%
!!! CGTAGTTTTTAGTAAAATGG+CGG + chr4.1:74034518-74034537 None:intergenic 30.0%
AACCATGCAAACAATTATGG+AGG + chr4.1:74034779-74034798 None:intergenic 35.0%
AAGGAACTAAACCATACCTT+AGG + chr4.1:74034187-74034206 None:intergenic 35.0%
AATGGTAAGAAATTCCCCTA+AGG - chr4.1:74034168-74034187 MS.gene99037:intron 35.0%
ACAGCCTTCAAAGAATCTTA+TGG - chr4.1:74033648-74033667 MS.gene99037:intron 35.0%
ACTGAGAATCCATCAAGATA+AGG + chr4.1:74033433-74033452 None:intergenic 35.0%
AGGAACTAAACCATACCTTA+GGG + chr4.1:74034186-74034205 None:intergenic 35.0%
AGTGATTGCTTTATCTCTTC+AGG + chr4.1:74034880-74034899 None:intergenic 35.0%
ATGGAAGAGTTTGGATTTGT+TGG - chr4.1:74033499-74033518 MS.gene99037:intron 35.0%
ATTGCAAGAATCTTGCTCAA+AGG - chr4.1:74034429-74034448 MS.gene99037:intron 35.0%
CACAAACCCATGTTAAAAAC+TGG + chr4.1:74033592-74033611 None:intergenic 35.0%
CTGAGAATCCATCAAGATAA+GGG + chr4.1:74033432-74033451 None:intergenic 35.0%
GCAAATGAAGGGTTTAAAGA+TGG + chr4.1:74033346-74033365 None:intergenic 35.0%
GTGATTGCTTTATCTCTTCA+GGG + chr4.1:74034879-74034898 None:intergenic 35.0%
GTGTGTATGTTTATGTTGTC+TGG - chr4.1:74033780-74033799 MS.gene99037:CDS 35.0%
GTTACAATAAGAAATGGAGG+AGG - chr4.1:74034087-74034106 MS.gene99037:intron 35.0%
GTTGAGAATGAAGCAAATGA+AGG + chr4.1:74033358-74033377 None:intergenic 35.0%
TAAAATCAGCTGCAAAGTTG+AGG - chr4.1:74033549-74033568 MS.gene99037:intron 35.0%
TAAGAAATTCCCCTAAGGTA+TGG - chr4.1:74034173-74034192 MS.gene99037:intron 35.0%
TCATCATACCCTTATCTTGA+TGG - chr4.1:74033421-74033440 MS.gene99037:intron 35.0%
TCTTCCATACTTTCTTGTTG+TGG + chr4.1:74033487-74033506 None:intergenic 35.0%
TGAAACTGCTTATAACACAC+TGG + chr4.1:74034399-74034418 None:intergenic 35.0%
! AACTACGCTTTTGAGCTTTA+AGG - chr4.1:74034531-74034550 MS.gene99037:CDS 35.0%
! ACATGAAAGAGCTTCTAGAA+AGG - chr4.1:74034056-74034075 MS.gene99037:intron 35.0%
! CAAGAAAGTATGGAAGAGTT+TGG - chr4.1:74033490-74033509 MS.gene99037:intron 35.0%
! CTTTCTTGTTGTGGTAAAAC+TGG + chr4.1:74033478-74033497 None:intergenic 35.0%
! GTTTTTAACATGGGTTTGTG+TGG - chr4.1:74033592-74033611 MS.gene99037:intron 35.0%
!! ACTACGCTTTTGAGCTTTAA+GGG - chr4.1:74034532-74034551 MS.gene99037:CDS 35.0%
!! GTGAACACATTAGAAGCATT+AGG - chr4.1:74034361-74034380 MS.gene99037:intron 35.0%
!!! CTAGTCTATTTTTGGTTCTG+CGG + chr4.1:74034753-74034772 None:intergenic 35.0%
AATTGTCCCTAAGATCAGCA+AGG - chr4.1:74033723-74033742 MS.gene99037:intron 40.0%
ACTGTTGACAGTAACAATCC+TGG + chr4.1:74034343-74034362 None:intergenic 40.0%
AGTCAAAGGTCCAACCATTA+GGG + chr4.1:74033297-74033316 None:intergenic 40.0%
AGTGAGTTACTACTCCCTAA+TGG - chr4.1:74033280-74033299 MS.gene99037:CDS 40.0%
AGTTACTACTCCCTAATGGT+TGG - chr4.1:74033284-74033303 MS.gene99037:CDS 40.0%
ATGGACAGGACATCAATTCT+AGG - chr4.1:74034019-74034038 MS.gene99037:CDS 40.0%
CAATAAGAAATGGAGGAGGA+AGG - chr4.1:74034091-74034110 MS.gene99037:intron 40.0%
CAATCACTATTCAGGAATGC+AGG - chr4.1:74034892-74034911 MS.gene99037:CDS 40.0%
CTATTCAGGAATGCAGGTTA+TGG - chr4.1:74034898-74034917 MS.gene99037:CDS 40.0%
GAATCACCTTGCTGATCTTA+GGG + chr4.1:74033732-74033751 None:intergenic 40.0%
GACCATCTACCTAAACACAT+GGG + chr4.1:74034840-74034859 None:intergenic 40.0%
GATGATGCATCAGTTCCATA+AGG + chr4.1:74033406-74033425 None:intergenic 40.0%
GGAACTAAACCATACCTTAG+GGG + chr4.1:74034185-74034204 None:intergenic 40.0%
TAACACACTGGTGAATCTCA+AGG + chr4.1:74034387-74034406 None:intergenic 40.0%
TGAATCACCTTGCTGATCTT+AGG + chr4.1:74033733-74033752 None:intergenic 40.0%
TGACCATCTACCTAAACACA+TGG + chr4.1:74034841-74034860 None:intergenic 40.0%
TGCCTCCATAATTGTTTGCA+TGG - chr4.1:74034774-74034793 MS.gene99037:CDS 40.0%
TTCCCATGTGTTTAGGTAGA+TGG - chr4.1:74034835-74034854 MS.gene99037:CDS 40.0%
TTGTTGGAAGTGAGAACAAG+AGG - chr4.1:74033515-74033534 MS.gene99037:intron 40.0%
! TCCTTCAACCCTTTTGGATT+TGG + chr4.1:74033629-74033648 None:intergenic 40.0%
!! AGATACTGATTCTTGTGTCC+TGG + chr4.1:74034306-74034325 None:intergenic 40.0%
!! GAAGAAAGCGTTTGAATGAC+AGG - chr4.1:74033683-74033702 MS.gene99037:intron 40.0%
!! GGAGGCAACTAGTCTATTTT+TGG + chr4.1:74034761-74034780 None:intergenic 40.0%
AGGGACAATTGACCTAAGCA+TGG + chr4.1:74033713-74033732 None:intergenic 45.0%
ATGACAGGCTTTCCATGCTT+AGG - chr4.1:74033698-74033717 MS.gene99037:intron 45.0%
CACTAACTCGTTCAAACCAG+TGG + chr4.1:74033264-74033283 None:intergenic 45.0%
GAGTCAAAGGTCCAACCATT+AGG + chr4.1:74033298-74033317 None:intergenic 45.0%
GCCAAATCCAAAAGGGTTGA+AGG - chr4.1:74033625-74033644 MS.gene99037:intron 45.0%
TCAGGAATGCAGGTTATGGT+GGG - chr4.1:74034902-74034921 MS.gene99037:CDS 45.0%
TTCAGGAATGCAGGTTATGG+TGG - chr4.1:74034901-74034920 MS.gene99037:CDS 45.0%
! GGTGCTGAATCATCAAACTC+AGG + chr4.1:74033457-74033476 None:intergenic 45.0%
!! CAGTAACAATCCTGGCTTTG+TGG + chr4.1:74034335-74034354 None:intergenic 45.0%
! AGGCTGTCCTTCAACCCTTT+TGG + chr4.1:74033635-74033654 None:intergenic 50.0%
ATCTGCTGTGCCACAAAGCC+AGG - chr4.1:74034322-74034341 MS.gene99037:intron 55.0%
TGATGTTGAGCGGAGAGACC+AGG - chr4.1:74034285-74034304 MS.gene99037:intron 55.0%


Chromosome Type Strat End Strand Name
chr4.1 gene 74033247 74034936 74033247 ID=MS.gene99037
chr4.1 mRNA 74033247 74034936 74033247 ID=MS.gene99037.t1;Parent=MS.gene99037
chr4.1 exon 74034439 74034936 74034439 ID=MS.gene99037.t1.exon1;Parent=MS.gene99037.t1
chr4.1 CDS 74034439 74034936 74034439 ID=cds.MS.gene99037.t1;Parent=MS.gene99037.t1
chr4.1 exon 74034101 74034164 74034101 ID=MS.gene99037.t1.exon2;Parent=MS.gene99037.t1
chr4.1 CDS 74034101 74034164 74034101 ID=cds.MS.gene99037.t1;Parent=MS.gene99037.t1
chr4.1 exon 74033994 74034070 74033994 ID=MS.gene99037.t1.exon3;Parent=MS.gene99037.t1
chr4.1 CDS 74033994 74034070 74033994 ID=cds.MS.gene99037.t1;Parent=MS.gene99037.t1
chr4.1 exon 74033733 74033900 74033733 ID=MS.gene99037.t1.exon4;Parent=MS.gene99037.t1
chr4.1 CDS 74033733 74033900 74033733 ID=cds.MS.gene99037.t1;Parent=MS.gene99037.t1
chr4.1 exon 74033247 74033333 74033247 ID=MS.gene99037.t1.exon5;Parent=MS.gene99037.t1
chr4.1 CDS 74033247 74033333 74033247 ID=cds.MS.gene99037.t1;Parent=MS.gene99037.t1
Gene Sequence

>MS.gene99037

ATGGAATACTTTATCCACTGGTTTGAACGAGTTAGTGAGTTACTACTCCCTAATGGTTGGACCTTTGACTCATTTGATGAAAATCTTCTCATCAATCCATCTTTAAACCCTTCATTTGCTTCATTCTCAACACCATTAGACCATAGATTTGAATGTCCTTATGGAACTGATGCATCATCATACCCTTATCTTGATGGATTCTCAGTTCCTGAGTTTGATGATTCAGCACCAGTTTTACCACAACAAGAAAGTATGGAAGAGTTTGGATTTGTTGGAAGTGAGAACAAGAGGTTTGAAGAGAGTAAAATCAGCTGCAAAGTTGAGGAACAAGTTAGTGAAACTCCAGTTTTTAACATGGGTTTGTGTGGTGAGAAAAAAGCCAAATCCAAAAGGGTTGAAGGACAGCCTTCAAAGAATCTTATGGATGAAAGAAGGAGAAGAAAGCGTTTGAATGACAGGCTTTCCATGCTTAGGTCAATTGTCCCTAAGATCAGCAAGGTGATTCAATATATATAATGTGTATGTATGTTTGTGTGTGTATGTTTATGTTGTCTGGCTCCGACACTTCAGATTGAAGATATGTTCAGTTATTCTTTTTTGTGTCTGGTGTTTATGTAAGTGCTCATAGTGTGTATATGTATGTGTGTTTTATTTTTGGTACAAGTGTTTGTGTTTTTTACCTTCATTGACTACAATTGACTAGCACTTGTATTTGGTGTTTGATTTTGAGATAAATTCATTTGAACTATCAAGAAAATGTAAATTTTGTAAGATGGACAGGACATCAATTCTAGGAGATACAATTGATTACATGAAAGAGCTTCTAGAAAGGATTAGTAAGTTACAATAAGAAATGGAGGAGGAAGGAACAAATCAGATAAACCTTTCAGGAATTTCTAAGGAATTAAAGCCAAATGAAGTAATGGTAAGAAATTCCCCTAAGGTATGGTTTAGTTCCTTGAAGAATTAATGCATAATCATAGACCAAGTTTCTGAATAAATTTAATTAATGGAATGTTTTCTTTTTCTTTTTCAGTTTGATGTTGAGCGGAGAGACCAGGACACAAGAATCAGTATCTGCTGTGCCACAAAGCCAGGATTGTTACTGTCAACAGTGAACACATTAGAAGCATTAGGCCTTGAGATTCACCAGTGTGTTATAAGCAGTTTCAATGATTTTTCATTGCAAGAATCTTGCTCAAAGGTTAGTAAATTGTATTACTGCATGTTCGGATTGATAGCGAATTTGTCAGAATTACATTGTGTCGCCGCCATTTTACTAAAAACTACGCTTTTGAGCTTTAAGGGTTATAATTGATCATGAAAAGTTTGGATGTTTGCGAGTAGAATTGCTATTGTCTTCAAAATGATTCTAATTTGAAGTTAGAATTTAGCGTTTTTTTTCTCTATAATTAATTTTTCGCCAGGAATTTATTACATTCGATTCAATTTTAGTCAGAAACAATTTTTTTCAATCAATTAATTCAAGATCAATTTTTGCGACCGCAGAACCAAAAATAGACTAGTTGCCTCCATAATTGTTTGCATGGTTAAAATAAAACATGTTCTTACTTCTTTTAACATATTATTCCCATGTGTTTAGGTAGATGGTCAGAGAAATTGTATGAACCCTGAAGAGATAAAGCAATCACTATTCAGGAATGCAGGTTATGGTGGGAGATGTCTCTAG
Protein sequence

>MS.gene99037.t1

MEYFIHWFERVSELLLPNGWTFDSFDENLLINPSLNPSFASFSTPLDHRFECPYGTDASSYPYLDGFSVPEFDDSAPVLPQQESMEEFGFVGSENKRFEESKISCKVEEQVSETPVFNMGLCGEKKAKSKRVEGQPSKNLMDERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDTIDYMKELLERIRTNQINLSGISKELKPNEVMVRNSPKFDVERRDQDTRISICCATKPGLLLSTVNTLEALGLEIHQCVISSFNDFSLQESCSKVDGQRNCMNPEEIKQSLFRNAGYGGRCL