Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene99148.t1 | XP_024632961.1 | 87.5 | 720 | 77 | 4 | 1 | 707 | 81 | 800 | 0.00E+00 | 1264.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene99148.t1 | Q9SZL8 | 26.5 | 597 | 374 | 11 | 6 | 600 | 104 | 637 | 5.6e-58 | 227.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene99148.t1 | D3YBB9 | 79.7 | 708 | 125 | 4 | 2 | 699 | 114 | 812 | 0.0e+00 | 1138.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene99148.t1 | TF | FAR1 |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene99148.t1 | MTR_0558s0020 | 87.879 | 231 | 28 | 0 | 1 | 231 | 66 | 296 | 8.84e-149 | 435 |
MS.gene99148.t1 | MTR_6g090505 | 82.700 | 237 | 41 | 0 | 1 | 237 | 1 | 237 | 2.53e-138 | 410 |
MS.gene99148.t1 | MTR_6g090505 | 67.647 | 102 | 6 | 2 | 332 | 431 | 230 | 306 | 6.12e-34 | 134 |
MS.gene99148.t1 | MTR_6g090505 | 80.488 | 41 | 8 | 0 | 510 | 550 | 322 | 362 | 6.49e-13 | 71.2 |
MS.gene99148.t1 | MTR_1g083640 | 89.216 | 204 | 22 | 0 | 1 | 204 | 81 | 284 | 5.78e-132 | 391 |
MS.gene99148.t1 | MTR_8g446020 | 78.947 | 228 | 48 | 0 | 4 | 231 | 29 | 256 | 7.56e-127 | 377 |
MS.gene99148.t1 | MTR_0337s0060 | 59.048 | 315 | 30 | 4 | 383 | 694 | 21 | 239 | 1.05e-109 | 332 |
MS.gene99148.t1 | MTR_2g014100 | 86.047 | 172 | 24 | 0 | 1 | 172 | 74 | 245 | 3.37e-103 | 316 |
MS.gene99148.t1 | MTR_0337s0040 | 77.083 | 192 | 44 | 0 | 4 | 195 | 30 | 221 | 3.94e-101 | 310 |
MS.gene99148.t1 | MTR_3g028680 | 81.646 | 158 | 26 | 1 | 553 | 707 | 1 | 158 | 1.62e-85 | 268 |
MS.gene99148.t1 | MTR_1g055240 | 87.324 | 142 | 18 | 0 | 27 | 168 | 3 | 144 | 8.38e-85 | 264 |
MS.gene99148.t1 | MTR_0019s0290 | 80.921 | 152 | 29 | 0 | 18 | 169 | 9 | 160 | 1.04e-81 | 256 |
MS.gene99148.t1 | MTR_3g008240 | 85.507 | 138 | 20 | 0 | 1 | 138 | 66 | 203 | 1.29e-78 | 250 |
MS.gene99148.t1 | MTR_2g067090 | 78.710 | 155 | 30 | 1 | 556 | 707 | 99 | 253 | 1.35e-76 | 248 |
MS.gene99148.t1 | MTR_4g040430 | 83.333 | 138 | 19 | 1 | 1 | 138 | 65 | 198 | 4.22e-74 | 238 |
MS.gene99148.t1 | MTR_4g133495 | 60.526 | 190 | 49 | 2 | 503 | 689 | 80 | 246 | 3.17e-68 | 225 |
MS.gene99148.t1 | MTR_4g133340 | 60.526 | 190 | 49 | 2 | 503 | 689 | 80 | 246 | 3.17e-68 | 225 |
MS.gene99148.t1 | MTR_5g071590 | 78.846 | 104 | 22 | 0 | 1 | 104 | 78 | 181 | 3.21e-53 | 182 |
MS.gene99148.t1 | MTR_6g051425 | 33.333 | 273 | 154 | 5 | 21 | 277 | 64 | 324 | 3.05e-38 | 145 |
MS.gene99148.t1 | MTR_1281s0010 | 80.952 | 63 | 12 | 0 | 1 | 63 | 47 | 109 | 4.07e-29 | 112 |
MS.gene99148.t1 | MTR_2g067130 | 62.963 | 81 | 24 | 2 | 630 | 707 | 46 | 123 | 5.08e-22 | 93.6 |
MS.gene99148.t1 | MTR_1g070355 | 25.357 | 280 | 193 | 4 | 21 | 298 | 119 | 384 | 2.05e-15 | 80.5 |
MS.gene99148.t1 | MTR_0337s0050 | 75.000 | 36 | 9 | 0 | 195 | 230 | 14 | 49 | 9.46e-14 | 67.4 |
MS.gene99148.t1 | MTR_0402s0040 | 25.333 | 150 | 97 | 3 | 20 | 169 | 71 | 205 | 4.82e-12 | 69.3 |
MS.gene99148.t1 | MTR_4g035820 | 24.268 | 239 | 159 | 7 | 16 | 235 | 89 | 324 | 4.50e-11 | 66.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene99148.t1 | AT4G38180 | 27.101 | 583 | 360 | 11 | 20 | 600 | 118 | 637 | 3.14e-66 | 234 |
MS.gene99148.t1 | AT4G15090 | 26.045 | 622 | 392 | 12 | 59 | 676 | 121 | 678 | 2.31e-60 | 218 |
MS.gene99148.t1 | AT4G15090 | 26.045 | 622 | 392 | 12 | 59 | 676 | 121 | 678 | 2.31e-60 | 218 |
MS.gene99148.t1 | AT4G15090 | 26.045 | 622 | 392 | 12 | 59 | 676 | 121 | 678 | 2.31e-60 | 218 |
MS.gene99148.t1 | AT4G15090 | 26.045 | 622 | 392 | 12 | 59 | 676 | 121 | 678 | 2.31e-60 | 218 |
MS.gene99148.t1 | AT4G15090 | 26.045 | 622 | 392 | 12 | 59 | 676 | 121 | 678 | 2.31e-60 | 218 |
MS.gene99148.t1 | AT2G27110 | 25.710 | 599 | 366 | 14 | 63 | 654 | 108 | 634 | 5.72e-52 | 194 |
MS.gene99148.t1 | AT2G27110 | 25.710 | 599 | 366 | 14 | 63 | 654 | 108 | 634 | 5.72e-52 | 194 |
MS.gene99148.t1 | AT2G27110 | 26.614 | 511 | 313 | 10 | 149 | 654 | 36 | 489 | 2.73e-51 | 190 |
MS.gene99148.t1 | AT3G06250 | 24.310 | 580 | 325 | 13 | 20 | 596 | 235 | 703 | 2.59e-48 | 182 |
MS.gene99148.t1 | AT3G06250 | 24.310 | 580 | 325 | 13 | 20 | 596 | 235 | 703 | 2.59e-48 | 182 |
MS.gene99148.t1 | AT3G06250 | 24.310 | 580 | 325 | 13 | 20 | 596 | 235 | 703 | 2.59e-48 | 182 |
MS.gene99148.t1 | AT3G22170 | 22.989 | 696 | 420 | 16 | 5 | 688 | 100 | 691 | 3.62e-48 | 182 |
MS.gene99148.t1 | AT3G22170 | 22.989 | 696 | 420 | 16 | 5 | 688 | 100 | 691 | 3.62e-48 | 182 |
MS.gene99148.t1 | AT1G76320 | 24.417 | 643 | 395 | 16 | 19 | 655 | 41 | 598 | 1.04e-47 | 179 |
MS.gene99148.t1 | AT1G76320 | 24.883 | 643 | 392 | 17 | 19 | 655 | 41 | 598 | 2.94e-47 | 179 |
MS.gene99148.t1 | AT1G76320 | 24.883 | 643 | 392 | 17 | 19 | 655 | 41 | 598 | 3.30e-47 | 179 |
MS.gene99148.t1 | AT1G76320 | 24.883 | 643 | 392 | 17 | 19 | 655 | 41 | 598 | 3.30e-47 | 179 |
MS.gene99148.t1 | AT4G38170 | 26.279 | 430 | 260 | 12 | 171 | 597 | 24 | 399 | 2.18e-44 | 168 |
MS.gene99148.t1 | AT5G18960 | 25.586 | 469 | 288 | 12 | 133 | 596 | 315 | 727 | 1.84e-42 | 165 |
MS.gene99148.t1 | AT5G18960 | 25.586 | 469 | 288 | 12 | 133 | 596 | 315 | 727 | 1.84e-42 | 165 |
MS.gene99148.t1 | AT2G32250 | 23.789 | 681 | 386 | 19 | 5 | 678 | 68 | 622 | 9.48e-41 | 160 |
MS.gene99148.t1 | AT2G32250 | 23.789 | 681 | 386 | 19 | 5 | 678 | 27 | 581 | 1.15e-40 | 160 |
MS.gene99148.t1 | AT2G32250 | 23.789 | 681 | 386 | 19 | 5 | 678 | 27 | 581 | 1.36e-40 | 159 |
MS.gene99148.t1 | AT2G32250 | 23.789 | 681 | 386 | 19 | 5 | 678 | 68 | 622 | 1.58e-40 | 159 |
MS.gene99148.t1 | AT2G32250 | 23.789 | 681 | 386 | 19 | 5 | 678 | 68 | 622 | 1.58e-40 | 159 |
MS.gene99148.t1 | AT2G32250 | 23.789 | 681 | 386 | 19 | 5 | 678 | 68 | 622 | 1.64e-40 | 159 |
MS.gene99148.t1 | AT2G32250 | 23.789 | 681 | 386 | 19 | 5 | 678 | 68 | 622 | 1.64e-40 | 159 |
MS.gene99148.t1 | AT2G32250 | 23.789 | 681 | 386 | 19 | 5 | 678 | 68 | 622 | 1.64e-40 | 159 |
MS.gene99148.t1 | AT1G10240 | 25.750 | 567 | 342 | 19 | 43 | 594 | 102 | 604 | 5.18e-39 | 154 |
MS.gene99148.t1 | AT1G10240 | 25.750 | 567 | 342 | 19 | 43 | 594 | 102 | 604 | 5.18e-39 | 154 |
MS.gene99148.t1 | AT5G28530 | 24.510 | 612 | 365 | 18 | 5 | 595 | 84 | 619 | 5.58e-38 | 151 |
MS.gene99148.t1 | AT5G28530 | 24.346 | 612 | 362 | 19 | 5 | 595 | 84 | 615 | 3.31e-37 | 149 |
MS.gene99148.t1 | AT5G28530 | 24.346 | 612 | 362 | 19 | 5 | 595 | 84 | 615 | 3.31e-37 | 149 |
MS.gene99148.t1 | AT1G80010 | 25.164 | 457 | 289 | 13 | 146 | 597 | 253 | 661 | 8.50e-35 | 141 |
MS.gene99148.t1 | AT1G52520 | 22.059 | 612 | 376 | 16 | 2 | 597 | 112 | 638 | 9.03e-32 | 132 |
MS.gene99148.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 155 | 419 | 106 | 369 | 1.85e-27 | 119 |
MS.gene99148.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 526 | 656 | 438 | 558 | 1.62e-12 | 71.2 |
MS.gene99148.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 155 | 419 | 177 | 440 | 2.09e-27 | 119 |
MS.gene99148.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 526 | 656 | 509 | 629 | 1.95e-12 | 71.2 |
MS.gene99148.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 155 | 419 | 163 | 426 | 2.17e-27 | 119 |
MS.gene99148.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 526 | 656 | 495 | 615 | 1.65e-12 | 71.6 |
MS.gene99148.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 155 | 419 | 163 | 426 | 2.17e-27 | 119 |
MS.gene99148.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 526 | 656 | 495 | 615 | 1.65e-12 | 71.6 |
MS.gene99148.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 155 | 419 | 163 | 426 | 2.23e-27 | 119 |
MS.gene99148.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 526 | 656 | 495 | 615 | 1.84e-12 | 71.2 |
MS.gene99148.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 155 | 419 | 163 | 426 | 2.49e-27 | 118 |
MS.gene99148.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 526 | 656 | 495 | 615 | 1.85e-12 | 71.2 |
MS.gene99148.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 155 | 419 | 163 | 426 | 2.49e-27 | 118 |
MS.gene99148.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 526 | 656 | 495 | 615 | 1.85e-12 | 71.2 |
MS.gene99148.t1 | AT5G28530 | 22.093 | 602 | 329 | 21 | 5 | 595 | 84 | 556 | 6.86e-19 | 91.7 |
MS.gene99148.t1 | AT5G28530 | 21.927 | 602 | 326 | 22 | 5 | 595 | 84 | 552 | 3.42e-18 | 89.4 |
Find 106 sgRNAs with CRISPR-Local
Find 174 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTCGATGAGTTAACTAATT+TGG | 0.156761 | 8.2:+82686663 | MS.gene99148:CDS |
AGTCGCTTCTTTGACCTAAT+TGG | 0.186128 | 8.2:-82687795 | None:intergenic |
CTTTAGTCATTTCAACATTA+TGG | 0.194287 | 8.2:+82686930 | MS.gene99148:CDS |
TACATTTCAGCTGCCTTTCT+TGG | 0.197151 | 8.2:+82686382 | MS.gene99148:intron |
CAACAAGATTATGCTCTATT+TGG | 0.198611 | 8.2:+82685859 | MS.gene99148:CDS |
CATCGTAAGAGTGTGTTATT+TGG | 0.276792 | 8.2:+82686415 | MS.gene99148:CDS |
TATGGTTTGAGGTTTCTTAT+TGG | 0.280533 | 8.2:-82686509 | None:intergenic |
TTCTTTGACCTAATTGGATT+TGG | 0.299426 | 8.2:-82687789 | None:intergenic |
GGTTTCAAATGTTGATGTTT+TGG | 0.317051 | 8.2:+82687224 | MS.gene99148:CDS |
AATCAGATTTCGACTACAAT+TGG | 0.318540 | 8.2:+82686704 | MS.gene99148:CDS |
TGTTCTTGAGGCAGGGAAAA+AGG | 0.322946 | 8.2:+82687641 | MS.gene99148:CDS |
GTCTTTAGTGCCAACATTCA+TGG | 0.339668 | 8.2:-82687517 | None:intergenic |
ACCAGCCTGGTCTGTGTATA+TGG | 0.341000 | 8.2:-82686527 | None:intergenic |
GCCGATATTTATTGTTTGTT+CGG | 0.341758 | 8.2:-82685909 | None:intergenic |
GAGGGATAATCATGCTGATT+TGG | 0.346844 | 8.2:+82686963 | MS.gene99148:CDS |
TATGCATTGGTCTTCAGTTT+GGG | 0.370760 | 8.2:+82686804 | MS.gene99148:CDS |
GAGGAATTTCTTATTTCTAA+AGG | 0.381584 | 8.2:+82687666 | MS.gene99148:CDS |
CTCAACGGTGTTCTTGAGGC+AGG | 0.386173 | 8.2:+82687633 | MS.gene99148:CDS |
AACAATAAATATCGGCCATT+AGG | 0.388497 | 8.2:+82685916 | MS.gene99148:CDS |
TCATGCTGATTTGGACTTCA+AGG | 0.389304 | 8.2:+82686972 | MS.gene99148:CDS |
ACCGAACAAACAATAAATAT+CGG | 0.389395 | 8.2:+82685908 | MS.gene99148:CDS |
GTATGCATTGGTCTTCAGTT+TGG | 0.392120 | 8.2:+82686803 | MS.gene99148:CDS |
TTCTCATACTCAACAAGAAC+TGG | 0.395633 | 8.2:-82685379 | None:intergenic |
AAGAAAGACCAAATCCAATT+AGG | 0.397771 | 8.2:+82687781 | MS.gene99148:CDS |
TTTGGTCTTTCTTTGAACTT+TGG | 0.398856 | 8.2:-82687771 | None:intergenic |
CATGTCGTATGTTTGAGAAC+CGG | 0.411671 | 8.2:+82687349 | MS.gene99148:CDS |
GATTATGATCTTCAAACCTT+GGG | 0.413114 | 8.2:-82687272 | None:intergenic |
GGGTTGTCACAGTCGACATT+AGG | 0.419786 | 8.2:+82687307 | MS.gene99148:CDS |
CGATTATGATCTTCAAACCT+TGG | 0.425681 | 8.2:-82687273 | None:intergenic |
CGAGAAGTAAATGAAGTTCA+AGG | 0.430014 | 8.2:+82685556 | MS.gene99148:CDS |
AGCTGGAATATATTTGAAGT+TGG | 0.433136 | 8.2:+82685438 | MS.gene99148:CDS |
TGAATGTCTATAAGATATAT+AGG | 0.445219 | 8.2:+82685470 | MS.gene99148:CDS |
TGGTCTGTGTATATGGTTTG+AGG | 0.447350 | 8.2:-82686520 | None:intergenic |
GAAAGGGTTGGTTGTAAAGC+TGG | 0.447509 | 8.2:+82685421 | MS.gene99148:CDS |
CGCTTTAAAACATATTGTGC+AGG | 0.447633 | 8.2:-82687450 | None:intergenic |
CGTTATGCTTGTAACAAAGA+AGG | 0.449439 | 8.2:+82685304 | MS.gene99148:CDS |
GCTTTAATAAATTCTAAAGC+TGG | 0.450264 | 8.2:+82685586 | MS.gene99148:CDS |
TGGTCTTTGCTCATGGCACA+TGG | 0.452802 | 8.2:+82686594 | MS.gene99148:CDS |
CTCCTCAAAATAGTATTTGA+AGG | 0.453936 | 8.2:-82687106 | None:intergenic |
ATGTCGTATGTTTGAGAACC+GGG | 0.461344 | 8.2:+82687350 | MS.gene99148:CDS |
GGCCTACTTCAGACTTTAAG+TGG | 0.462107 | 8.2:+82686758 | MS.gene99148:CDS |
CGCAAACACGTGTAGAAAGC+TGG | 0.465682 | 8.2:-82687584 | None:intergenic |
ACAAAATAAGAAATCGGATA+AGG | 0.469178 | 8.2:+82685270 | MS.gene99148:CDS |
TTTGAGGAGGACACAACAAA+AGG | 0.469432 | 8.2:+82687120 | MS.gene99148:CDS |
GCTGTCTGTGAGCCATCTGT+TGG | 0.470881 | 8.2:+82687741 | MS.gene99148:CDS |
CTGTCTGTGAGCCATCTGTT+GGG | 0.478819 | 8.2:+82687742 | MS.gene99148:CDS |
TTACAACCAACCCTTTCCTC+TGG | 0.485330 | 8.2:-82685415 | None:intergenic |
TCTAATGACGACTCGTCAAA+AGG | 0.488508 | 8.2:+82685699 | MS.gene99148:CDS |
CAATTCACAAAATAAGAAAT+CGG | 0.490263 | 8.2:+82685264 | MS.gene99148:CDS |
ATGATTGTCAAAACCAAGAA+AGG | 0.491378 | 8.2:-82686395 | None:intergenic |
ATCAGATTTCGACTACAATT+GGG | 0.491708 | 8.2:+82686705 | MS.gene99148:CDS |
CGTCAAAAGGAGATGGTGGC+TGG | 0.492100 | 8.2:+82685712 | MS.gene99148:CDS |
ACATTATGGTTCAGAGAATG+AGG | 0.494022 | 8.2:+82686944 | MS.gene99148:CDS |
GACCGCATAAGCTGACTGTT+GGG | 0.496307 | 8.2:-82687024 | None:intergenic |
TGTCTTCTGCAGCATCAACT+TGG | 0.502977 | 8.2:-82685804 | None:intergenic |
CTCATTCAAATCGTATGCAT+TGG | 0.507227 | 8.2:+82686791 | MS.gene99148:CDS |
ATCATAATCGACTTGATGAA+AGG | 0.507955 | 8.2:+82687286 | MS.gene99148:CDS |
TTTAAGTCCGAAAATCGAAA+AGG | 0.508080 | 8.2:-82685670 | None:intergenic |
ATTGGTCTTCAGTTTGGGTG+AGG | 0.509410 | 8.2:+82686809 | MS.gene99148:CDS |
GATCTTCAAACCTTGGGGAA+AGG | 0.519004 | 8.2:-82687266 | None:intergenic |
CAAAATAGTATTTGAAGGAA+AGG | 0.519540 | 8.2:-82687101 | None:intergenic |
TAAAGAATCGAACAAGTGAA+TGG | 0.519618 | 8.2:-82686912 | None:intergenic |
AAATGCTCTACTTTATGTAA+TGG | 0.520476 | 8.2:-82685514 | None:intergenic |
TCATAATCGACTTGATGAAA+GGG | 0.526860 | 8.2:+82687287 | MS.gene99148:CDS |
TTGAGGAGGACACAACAAAA+GGG | 0.529908 | 8.2:+82687121 | MS.gene99148:CDS |
TGTCTATAAGATATATAGGT+GGG | 0.532209 | 8.2:+82685474 | MS.gene99148:CDS |
CTGAAATCTACCATGAATGT+TGG | 0.534154 | 8.2:+82687507 | MS.gene99148:CDS |
TAACAAAGAAGGTTTCAAGA+AGG | 0.538422 | 8.2:+82685315 | MS.gene99148:CDS |
AATCGAACAAGTGAATGGTC+TGG | 0.540971 | 8.2:-82686907 | None:intergenic |
TATATCTTATAGACATTCAA+CGG | 0.544310 | 8.2:-82685466 | None:intergenic |
AACAAAGAAGGTTTCAAGAA+GGG | 0.545537 | 8.2:+82685316 | MS.gene99148:CDS |
CGATGTTGATTATAATGAGA+GGG | 0.549585 | 8.2:+82687203 | MS.gene99148:CDS |
GAGAACATCTTATGAAGTGA+TGG | 0.551307 | 8.2:+82685618 | MS.gene99148:CDS |
ACTTCAACAACGCACCAGCC+TGG | 0.557139 | 8.2:-82686540 | None:intergenic |
AATGAAGCTCTCTCGAAACC+AGG | 0.565261 | 8.2:+82685766 | MS.gene99148:CDS |
GGGTGAAGGTGTTGGAGGCA+CGG | 0.565649 | 8.2:+82685639 | MS.gene99148:CDS |
TACACGTGTTTGCGCAGATG+CGG | 0.571672 | 8.2:+82687593 | MS.gene99148:CDS |
GGACCGCATAAGCTGACTGT+TGG | 0.579264 | 8.2:-82687025 | None:intergenic |
TGGTGTATACTTGTTTACTA+CGG | 0.585960 | 8.2:-82687046 | None:intergenic |
TCAACGGTGTTCTTGAGGCA+GGG | 0.590097 | 8.2:+82687634 | MS.gene99148:CDS |
ACCATATACACAGACCAGGC+TGG | 0.590176 | 8.2:+82686526 | MS.gene99148:CDS |
ATTTCTCAACGGTGTTCTTG+AGG | 0.591378 | 8.2:+82687629 | MS.gene99148:CDS |
TTTGGTGCAGTCCCAACAGA+TGG | 0.595102 | 8.2:-82687753 | None:intergenic |
TGAAGACTTAGAAGGCGTAA+CGG | 0.598405 | 8.2:-82687709 | None:intergenic |
TTGAAGGAAACCTTTCCCCA+AGG | 0.600566 | 8.2:+82687256 | MS.gene99148:CDS |
GAAGTGATGGGTGAAGGTGT+TGG | 0.603704 | 8.2:+82685631 | MS.gene99148:CDS |
GACGACTCGTCAAAAGGAGA+TGG | 0.604288 | 8.2:+82685705 | MS.gene99148:CDS |
ACGTGTTTGCGCAGATGCGG+AGG | 0.605934 | 8.2:+82687596 | MS.gene99148:CDS |
ATCCCAACAGTCAGCTTATG+CGG | 0.606153 | 8.2:+82687022 | MS.gene99148:CDS |
GACTCGTCAAAAGGAGATGG+TGG | 0.611157 | 8.2:+82685708 | MS.gene99148:CDS |
AGCCACTTAAAGTCTGAAGT+AGG | 0.617789 | 8.2:-82686760 | None:intergenic |
AGAACTGGACTGTCACATGT+TGG | 0.620791 | 8.2:-82685364 | None:intergenic |
GTGATGGGTGAAGGTGTTGG+AGG | 0.621481 | 8.2:+82685634 | MS.gene99148:CDS |
ACGATGTTGATTATAATGAG+AGG | 0.622271 | 8.2:+82687202 | MS.gene99148:CDS |
ATTATGATCTTCAAACCTTG+GGG | 0.630358 | 8.2:-82687271 | None:intergenic |
GGTCTTTGCTCATGGCACAT+GGG | 0.639768 | 8.2:+82686595 | MS.gene99148:CDS |
AGAACATCTTATGAAGTGAT+GGG | 0.643044 | 8.2:+82685619 | MS.gene99148:CDS |
CATTATGGTTCAGAGAATGA+GGG | 0.643278 | 8.2:+82686945 | MS.gene99148:CDS |
ATGTCTATAAGATATATAGG+TGG | 0.643489 | 8.2:+82685473 | MS.gene99148:CDS |
GATTTCAGCTTATCGACAGA+CGG | 0.644926 | 8.2:-82687492 | None:intergenic |
TGAATAAATGAAAAGCAAGA+TGG | 0.655697 | 8.2:-82687066 | None:intergenic |
TCTTATGAAGTGATGGGTGA+AGG | 0.656961 | 8.2:+82685625 | MS.gene99148:CDS |
GCATCTGAAATATTTCTCAA+CGG | 0.661104 | 8.2:+82687618 | MS.gene99148:CDS |
CATGTCGACATAAGAAACCC+CGG | 0.663279 | 8.2:-82687368 | None:intergenic |
TCAAACCATATACACAGACC+AGG | 0.671057 | 8.2:+82686522 | MS.gene99148:CDS |
TGTCGTATGTTTGAGAACCG+GGG | 0.673760 | 8.2:+82687351 | MS.gene99148:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTTTTAATTTTGTTATGTT+TGG | - | chr8.2:82688230-82688249 | None:intergenic | 10.0% |
!!! | GTTTTTTTTTGTTATAAGTT+AGG | + | chr8.2:82687922-82687941 | MS.gene99148:intron | 15.0% |
!! | ATTAAAGTCATAATCAAACA+AGG | + | chr8.2:82688121-82688140 | MS.gene99148:intron | 20.0% |
!! | CAATTCACAAAATAAGAAAT+CGG | + | chr8.2:82685264-82685283 | MS.gene99148:CDS | 20.0% |
!! | TATATCTTATAGACATTCAA+CGG | - | chr8.2:82685469-82685488 | None:intergenic | 20.0% |
!! | TGAATGTCTATAAGATATAT+AGG | + | chr8.2:82685470-82685489 | MS.gene99148:CDS | 20.0% |
!! | TTGGATTTATAATGTTAGTA+TGG | - | chr8.2:82688211-82688230 | None:intergenic | 20.0% |
!! | TTTAAACAATGTAGCATTAT+TGG | + | chr8.2:82688148-82688167 | MS.gene99148:intron | 20.0% |
!!! | AATTTAATGTTCTGGTTTAT+TGG | + | chr8.2:82686091-82686110 | MS.gene99148:intron | 20.0% |
!!! | ATGATGAAAAACTGTTTTAA+TGG | + | chr8.2:82686733-82686752 | MS.gene99148:CDS | 20.0% |
!!! | TGAATGTTTATATTGATTGA+AGG | + | chr8.2:82686063-82686082 | MS.gene99148:intron | 20.0% |
! | AAAACACCTTGAAAAACATT+CGG | - | chr8.2:82686571-82686590 | None:intergenic | 25.0% |
! | AAAGTGATTATGAAAAAGCT+AGG | + | chr8.2:82687820-82687839 | MS.gene99148:intron | 25.0% |
! | AAATGCTCTACTTTATGTAA+TGG | - | chr8.2:82685517-82685536 | None:intergenic | 25.0% |
! | AAGTGATTATGAAAAAGCTA+GGG | + | chr8.2:82687821-82687840 | MS.gene99148:intron | 25.0% |
! | ACAAAATAAGAAATCGGATA+AGG | + | chr8.2:82685270-82685289 | MS.gene99148:CDS | 25.0% |
! | ACCGAACAAACAATAAATAT+CGG | + | chr8.2:82685908-82685927 | MS.gene99148:CDS | 25.0% |
! | AGTACAAAATACTAACCTAA+TGG | - | chr8.2:82685934-82685953 | None:intergenic | 25.0% |
! | ATGTCTATAAGATATATAGG+TGG | + | chr8.2:82685473-82685492 | MS.gene99148:CDS | 25.0% |
! | CAAAATAGTATTTGAAGGAA+AGG | - | chr8.2:82687104-82687123 | None:intergenic | 25.0% |
! | CTTTAGTCATTTCAACATTA+TGG | + | chr8.2:82686930-82686949 | MS.gene99148:CDS | 25.0% |
! | TGAAATTTGAATGAATGTTC+TGG | + | chr8.2:82685981-82686000 | MS.gene99148:intron | 25.0% |
! | TGAATAAATGAAAAGCAAGA+TGG | - | chr8.2:82687069-82687088 | None:intergenic | 25.0% |
! | TGTCTATAAGATATATAGGT+GGG | + | chr8.2:82685474-82685493 | MS.gene99148:CDS | 25.0% |
! | TTTCGATGAGTTAACTAATT+TGG | + | chr8.2:82686663-82686682 | MS.gene99148:CDS | 25.0% |
!! | AGGTTTAGAATTTAATGTTC+TGG | + | chr8.2:82686083-82686102 | MS.gene99148:intron | 25.0% |
!! | CAAAGTTTTTACAATTGAGA+AGG | + | chr8.2:82687164-82687183 | MS.gene99148:CDS | 25.0% |
!! | TGTTGTATTTTGTTCTGATT+TGG | + | chr8.2:82686353-82686372 | MS.gene99148:intron | 25.0% |
!! | TTAGTATGGTTTGTAATGTT+TGG | - | chr8.2:82688197-82688216 | None:intergenic | 25.0% |
!! | TTCCTTCAAATACTATTTTG+AGG | + | chr8.2:82687104-82687123 | MS.gene99148:CDS | 25.0% |
!!! | AAGACATAGCTAGTATTTTT+TGG | + | chr8.2:82685821-82685840 | MS.gene99148:CDS | 25.0% |
!!! | AGACATAGCTAGTATTTTTT+GGG | + | chr8.2:82685822-82685841 | MS.gene99148:CDS | 25.0% |
!!! | CTTATTTTGTGAATTGTTCT+TGG | - | chr8.2:82685260-82685279 | None:intergenic | 25.0% |
!!! | GAGGAATTTCTTATTTCTAA+AGG | + | chr8.2:82687666-82687685 | MS.gene99148:CDS | 25.0% |
!!! | GCTTTAATAAATTCTAAAGC+TGG | + | chr8.2:82685586-82685605 | MS.gene99148:CDS | 25.0% |
!!! | TGAAAAACTGTTTTAATGGA+AGG | + | chr8.2:82686737-82686756 | MS.gene99148:CDS | 25.0% |
AAACACATATGATCTTTCCA+TGG | - | chr8.2:82686154-82686173 | None:intergenic | 30.0% | |
AACAAAGAAGGTTTCAAGAA+GGG | + | chr8.2:82685316-82685335 | MS.gene99148:CDS | 30.0% | |
AACAATAAATATCGGCCATT+AGG | + | chr8.2:82685916-82685935 | MS.gene99148:CDS | 30.0% | |
AAGAAAGACCAAATCCAATT+AGG | + | chr8.2:82687781-82687800 | MS.gene99148:CDS | 30.0% | |
AATCAGATTTCGACTACAAT+TGG | + | chr8.2:82686704-82686723 | MS.gene99148:CDS | 30.0% | |
AGAACATCTTATGAAGTGAT+GGG | + | chr8.2:82685619-82685638 | MS.gene99148:CDS | 30.0% | |
ATAAGTTAGGAAAGATGATG+AGG | + | chr8.2:82687935-82687954 | MS.gene99148:intron | 30.0% | |
ATCAGATTTCGACTACAATT+GGG | + | chr8.2:82686705-82686724 | MS.gene99148:CDS | 30.0% | |
ATGATTGTCAAAACCAAGAA+AGG | - | chr8.2:82686398-82686417 | None:intergenic | 30.0% | |
ATTATGATCTTCAAACCTTG+GGG | - | chr8.2:82687274-82687293 | None:intergenic | 30.0% | |
CAACAAGATTATGCTCTATT+TGG | + | chr8.2:82685859-82685878 | MS.gene99148:CDS | 30.0% | |
CACAAATTCTAAGTCAAGAT+AGG | - | chr8.2:82686121-82686140 | None:intergenic | 30.0% | |
CTCCTCAAAATAGTATTTGA+AGG | - | chr8.2:82687109-82687128 | None:intergenic | 30.0% | |
CTGGTATATGTGTGTTAATT+TGG | + | chr8.2:82686020-82686039 | MS.gene99148:intron | 30.0% | |
GAGAATGCAAAGAAAAATCT+CGG | + | chr8.2:82686619-82686638 | MS.gene99148:CDS | 30.0% | |
GATTATGATCTTCAAACCTT+GGG | - | chr8.2:82687275-82687294 | None:intergenic | 30.0% | |
GCCGATATTTATTGTTTGTT+CGG | - | chr8.2:82685912-82685931 | None:intergenic | 30.0% | |
TAAAGAAAAACCAGAGGAAA+GGG | + | chr8.2:82685405-82685424 | MS.gene99148:CDS | 30.0% | |
TAAAGAATCGAACAAGTGAA+TGG | - | chr8.2:82686915-82686934 | None:intergenic | 30.0% | |
TAACAAAGAAGGTTTCAAGA+AGG | + | chr8.2:82685315-82685334 | MS.gene99148:CDS | 30.0% | |
TGGATATCATAGTAAAAACC+TGG | - | chr8.2:82685787-82685806 | None:intergenic | 30.0% | |
TGGTGTATACTTGTTTACTA+CGG | - | chr8.2:82687049-82687068 | None:intergenic | 30.0% | |
TTCTTTGACCTAATTGGATT+TGG | - | chr8.2:82687792-82687811 | None:intergenic | 30.0% | |
TTTAAGTCCGAAAATCGAAA+AGG | - | chr8.2:82685673-82685692 | None:intergenic | 30.0% | |
TTTCTATTTACACAGCTCAA+TGG | + | chr8.2:82686312-82686331 | MS.gene99148:intron | 30.0% | |
! | ACGATGTTGATTATAATGAG+AGG | + | chr8.2:82687202-82687221 | MS.gene99148:CDS | 30.0% |
! | AGCTGGAATATATTTGAAGT+TGG | + | chr8.2:82685438-82685457 | MS.gene99148:CDS | 30.0% |
! | CGATGTTGATTATAATGAGA+GGG | + | chr8.2:82687203-82687222 | MS.gene99148:CDS | 30.0% |
! | GAATCTTCCTTTTCGATTTT+CGG | + | chr8.2:82685663-82685682 | MS.gene99148:CDS | 30.0% |
! | GCATCTGAAATATTTCTCAA+CGG | + | chr8.2:82687618-82687637 | MS.gene99148:CDS | 30.0% |
! | GGTTTCAAATGTTGATGTTT+TGG | + | chr8.2:82687224-82687243 | MS.gene99148:CDS | 30.0% |
! | TATGGTTTGAGGTTTCTTAT+TGG | - | chr8.2:82686512-82686531 | None:intergenic | 30.0% |
! | TCAATTCCGAATGTTTTTCA+AGG | + | chr8.2:82686562-82686581 | MS.gene99148:CDS | 30.0% |
! | TGAGGCTTTAACAATTTAAG+CGG | + | chr8.2:82687890-82687909 | MS.gene99148:intron | 30.0% |
! | TGAGGCTTTAACTAAAAAAG+CGG | + | chr8.2:82687953-82687972 | MS.gene99148:intron | 30.0% |
! | TTTGGTCTTTCTTTGAACTT+TGG | - | chr8.2:82687774-82687793 | None:intergenic | 30.0% |
!! | ATCATAATCGACTTGATGAA+AGG | + | chr8.2:82687286-82687305 | MS.gene99148:CDS | 30.0% |
!! | ATGTTCTGGTTTAGAATTGA+AGG | + | chr8.2:82685995-82686014 | MS.gene99148:intron | 30.0% |
!! | CTTCAAATACTATTTTGAGG+AGG | + | chr8.2:82687107-82687126 | MS.gene99148:CDS | 30.0% |
!! | TCATAATCGACTTGATGAAA+GGG | + | chr8.2:82687287-82687306 | MS.gene99148:CDS | 30.0% |
!! | TCGACATGTTTTCAAGATTT+TGG | + | chr8.2:82687383-82687402 | MS.gene99148:CDS | 30.0% |
!!! | CTGCACAATATGTTTTAAAG+CGG | + | chr8.2:82687451-82687470 | MS.gene99148:CDS | 30.0% |
!!! | GTTTTTCAAGGTGTTTTTCA+TGG | + | chr8.2:82686574-82686593 | MS.gene99148:CDS | 30.0% |
!!! | TTCAAGATTTTGGAGTTCTT+AGG | + | chr8.2:82687393-82687412 | MS.gene99148:CDS | 30.0% |
ACATTATGGTTCAGAGAATG+AGG | + | chr8.2:82686944-82686963 | MS.gene99148:CDS | 35.0% | |
CATTATGGTTCAGAGAATGA+GGG | + | chr8.2:82686945-82686964 | MS.gene99148:CDS | 35.0% | |
CCACATCATGAATGAATTCA+AGG | - | chr8.2:82688067-82688086 | None:intergenic | 35.0% | |
CCTTGAATTCATTCATGATG+TGG | + | chr8.2:82688064-82688083 | MS.gene99148:intron | 35.0% | |
CGAGAAGTAAATGAAGTTCA+AGG | + | chr8.2:82685556-82685575 | MS.gene99148:CDS | 35.0% | |
CGATTATGATCTTCAAACCT+TGG | - | chr8.2:82687276-82687295 | None:intergenic | 35.0% | |
CGTTATGCTTGTAACAAAGA+AGG | + | chr8.2:82685304-82685323 | MS.gene99148:CDS | 35.0% | |
CTAAAGAAAAACCAGAGGAA+AGG | + | chr8.2:82685404-82685423 | MS.gene99148:CDS | 35.0% | |
CTCATTCAAATCGTATGCAT+TGG | + | chr8.2:82686791-82686810 | MS.gene99148:CDS | 35.0% | |
CTGAAATCTACCATGAATGT+TGG | + | chr8.2:82687507-82687526 | MS.gene99148:CDS | 35.0% | |
GAAAGCTAAAGAAAAACCAG+AGG | + | chr8.2:82685399-82685418 | MS.gene99148:CDS | 35.0% | |
GAAGCAAAAGAAAGATGATG+AGG | + | chr8.2:82687872-82687891 | MS.gene99148:intron | 35.0% | |
GAATGAATTCAAGGAATGAG+TGG | - | chr8.2:82688058-82688077 | None:intergenic | 35.0% | |
GACAGAAATTCCTTATAGCT+CGG | + | chr8.2:82687847-82687866 | MS.gene99148:intron | 35.0% | |
GAGAACATCTTATGAAGTGA+TGG | + | chr8.2:82685618-82685637 | MS.gene99148:CDS | 35.0% | |
GTCTGCTTAATCCTAAAAAC+AGG | + | chr8.2:82685341-82685360 | MS.gene99148:CDS | 35.0% | |
TGTACTAAGTTTGTAATGCG+CGG | + | chr8.2:82688001-82688020 | MS.gene99148:intron | 35.0% | |
TTCTCATACTCAACAAGAAC+TGG | - | chr8.2:82685382-82685401 | None:intergenic | 35.0% | |
! | CATCGTAAGAGTGTGTTATT+TGG | + | chr8.2:82686415-82686434 | MS.gene99148:CDS | 35.0% |
! | GAGGCTTTAACAATTTAAGC+GGG | + | chr8.2:82687891-82687910 | MS.gene99148:intron | 35.0% |
! | TCTTTCAATGCTTTTCTTCG+TGG | + | chr8.2:82686874-82686893 | MS.gene99148:CDS | 35.0% |
! | TTTTTCATGGTCTTTGCTCA+TGG | + | chr8.2:82686587-82686606 | MS.gene99148:CDS | 35.0% |
!! | ACTGCTTTTGAAGACTTAGA+AGG | - | chr8.2:82687720-82687739 | None:intergenic | 35.0% |
!! | CGCTTTAAAACATATTGTGC+AGG | - | chr8.2:82687453-82687472 | None:intergenic | 35.0% |
!! | TATGCATTGGTCTTCAGTTT+GGG | + | chr8.2:82686804-82686823 | MS.gene99148:CDS | 35.0% |
!!! | AAGATTTTGGAGTTCTTAGG+TGG | + | chr8.2:82687396-82687415 | MS.gene99148:CDS | 35.0% |
!!! | AGACATCAGCTACTTTTGAT+TGG | + | chr8.2:82686458-82686477 | MS.gene99148:CDS | 35.0% |
!!! | CACAATATGTTTTAAAGCGG+TGG | + | chr8.2:82687454-82687473 | MS.gene99148:CDS | 35.0% |
AATCGAACAAGTGAATGGTC+TGG | - | chr8.2:82686910-82686929 | None:intergenic | 40.0% | |
ACCTATGATCTTTGCATAGC+TGG | - | chr8.2:82686252-82686271 | None:intergenic | 40.0% | |
AGTCGCTTCTTTGACCTAAT+TGG | - | chr8.2:82687798-82687817 | None:intergenic | 40.0% | |
ATGTCGTATGTTTGAGAACC+GGG | + | chr8.2:82687350-82687369 | MS.gene99148:CDS | 40.0% | |
ATTTCTCAACGGTGTTCTTG+AGG | + | chr8.2:82687629-82687648 | MS.gene99148:CDS | 40.0% | |
CATGTCGTATGTTTGAGAAC+CGG | + | chr8.2:82687349-82687368 | MS.gene99148:CDS | 40.0% | |
GATTTCAGCTTATCGACAGA+CGG | - | chr8.2:82687495-82687514 | None:intergenic | 40.0% | |
GTCTTTAGTGCCAACATTCA+TGG | - | chr8.2:82687520-82687539 | None:intergenic | 40.0% | |
TACATTTCAGCTGCCTTTCT+TGG | + | chr8.2:82686382-82686401 | MS.gene99148:intron | 40.0% | |
TCAAACCATATACACAGACC+AGG | + | chr8.2:82686522-82686541 | MS.gene99148:CDS | 40.0% | |
TCCAGCTATGCAAAGATCAT+AGG | + | chr8.2:82686248-82686267 | MS.gene99148:intron | 40.0% | |
TCTAATGACGACTCGTCAAA+AGG | + | chr8.2:82685699-82685718 | MS.gene99148:CDS | 40.0% | |
TGGTCTGTGTATATGGTTTG+AGG | - | chr8.2:82686523-82686542 | None:intergenic | 40.0% | |
TTGAGGAGGACACAACAAAA+GGG | + | chr8.2:82687121-82687140 | MS.gene99148:CDS | 40.0% | |
TTTGAGGAGGACACAACAAA+AGG | + | chr8.2:82687120-82687139 | MS.gene99148:CDS | 40.0% | |
TTTGCTTCTTCCGAGCTATA+AGG | - | chr8.2:82687860-82687879 | None:intergenic | 40.0% | |
! | AGCCACTTAAAGTCTGAAGT+AGG | - | chr8.2:82686763-82686782 | None:intergenic | 40.0% |
! | GAGGGATAATCATGCTGATT+TGG | + | chr8.2:82686963-82686982 | MS.gene99148:CDS | 40.0% |
! | TGAAGACTTAGAAGGCGTAA+CGG | - | chr8.2:82687712-82687731 | None:intergenic | 40.0% |
! | TGGTTTAGAATTGAAGGCTC+TGG | + | chr8.2:82686001-82686020 | MS.gene99148:intron | 40.0% |
!! | GTATGCATTGGTCTTCAGTT+TGG | + | chr8.2:82686803-82686822 | MS.gene99148:CDS | 40.0% |
!! | GTTTTGGATGCAGAACTTGA+AGG | + | chr8.2:82687240-82687259 | MS.gene99148:CDS | 40.0% |
!! | TCACATGTTGGCCTGTTTTT+AGG | - | chr8.2:82685355-82685374 | None:intergenic | 40.0% |
!! | TCATGCTGATTTGGACTTCA+AGG | + | chr8.2:82686972-82686991 | MS.gene99148:CDS | 40.0% |
!! | TCTTATGAAGTGATGGGTGA+AGG | + | chr8.2:82685625-82685644 | MS.gene99148:CDS | 40.0% |
!!! | GCTAGTATTTTTTGGGCAGA+TGG | + | chr8.2:82685829-82685848 | MS.gene99148:CDS | 40.0% |
AATGAAGCTCTCTCGAAACC+AGG | + | chr8.2:82685766-82685785 | MS.gene99148:CDS | 45.0% | |
AGAACTGGACTGTCACATGT+TGG | - | chr8.2:82685367-82685386 | None:intergenic | 45.0% | |
ATCCCAACAGTCAGCTTATG+CGG | + | chr8.2:82687022-82687041 | MS.gene99148:CDS | 45.0% | |
ATTTGTGCTCTGTACAGCCA+TGG | + | chr8.2:82686134-82686153 | MS.gene99148:intron | 45.0% | |
CATGTCGACATAAGAAACCC+CGG | - | chr8.2:82687371-82687390 | None:intergenic | 45.0% | |
GAAAAACCAGAGGAAAGGGT+TGG | + | chr8.2:82685409-82685428 | MS.gene99148:CDS | 45.0% | |
GATCTTCAAACCTTGGGGAA+AGG | - | chr8.2:82687269-82687288 | None:intergenic | 45.0% | |
GGCCTACTTCAGACTTTAAG+TGG | + | chr8.2:82686758-82686777 | MS.gene99148:CDS | 45.0% | |
TGTCGTATGTTTGAGAACCG+GGG | + | chr8.2:82687351-82687370 | MS.gene99148:CDS | 45.0% | |
TGTCTTCTGCAGCATCAACT+TGG | - | chr8.2:82685807-82685826 | None:intergenic | 45.0% | |
TGTTCTTGAGGCAGGGAAAA+AGG | + | chr8.2:82687641-82687660 | MS.gene99148:CDS | 45.0% | |
TTACAACCAACCCTTTCCTC+TGG | - | chr8.2:82685418-82685437 | None:intergenic | 45.0% | |
TTGAAGGAAACCTTTCCCCA+AGG | + | chr8.2:82687256-82687275 | MS.gene99148:CDS | 45.0% | |
! | GTGAGGTCACATTTTACAGC+TGG | + | chr8.2:82686826-82686845 | MS.gene99148:CDS | 45.0% |
!! | ATTGGTCTTCAGTTTGGGTG+AGG | + | chr8.2:82686809-82686828 | MS.gene99148:CDS | 45.0% |
!! | GAAAGGGTTGGTTGTAAAGC+TGG | + | chr8.2:82685421-82685440 | MS.gene99148:CDS | 45.0% |
ACCAGCCTGGTCTGTGTATA+TGG | - | chr8.2:82686530-82686549 | None:intergenic | 50.0% | |
ACCATATACACAGACCAGGC+TGG | + | chr8.2:82686526-82686545 | MS.gene99148:CDS | 50.0% | |
CGCAAACACGTGTAGAAAGC+TGG | - | chr8.2:82687587-82687606 | None:intergenic | 50.0% | |
CTGTCTGTGAGCCATCTGTT+GGG | + | chr8.2:82687742-82687761 | MS.gene99148:CDS | 50.0% | |
GACCGCATAAGCTGACTGTT+GGG | - | chr8.2:82687027-82687046 | None:intergenic | 50.0% | |
GACGACTCGTCAAAAGGAGA+TGG | + | chr8.2:82685705-82685724 | MS.gene99148:CDS | 50.0% | |
GACTCGTCAAAAGGAGATGG+TGG | + | chr8.2:82685708-82685727 | MS.gene99148:CDS | 50.0% | |
GGGTTGTCACAGTCGACATT+AGG | + | chr8.2:82687307-82687326 | MS.gene99148:CDS | 50.0% | |
GGTCTTTGCTCATGGCACAT+GGG | + | chr8.2:82686595-82686614 | MS.gene99148:CDS | 50.0% | |
GTGGCATGTTGAGAGCAAAG+AGG | + | chr8.2:82688083-82688102 | MS.gene99148:intron | 50.0% | |
TACACGTGTTTGCGCAGATG+CGG | + | chr8.2:82687593-82687612 | MS.gene99148:CDS | 50.0% | |
TCAACGGTGTTCTTGAGGCA+GGG | + | chr8.2:82687634-82687653 | MS.gene99148:CDS | 50.0% | |
TGGTCTTTGCTCATGGCACA+TGG | + | chr8.2:82686594-82686613 | MS.gene99148:CDS | 50.0% | |
! | TTTGGTGCAGTCCCAACAGA+TGG | - | chr8.2:82687756-82687775 | None:intergenic | 50.0% |
!! | GAAGTGATGGGTGAAGGTGT+TGG | + | chr8.2:82685631-82685650 | MS.gene99148:CDS | 50.0% |
ACTTCAACAACGCACCAGCC+TGG | - | chr8.2:82686543-82686562 | None:intergenic | 55.0% | |
CTCAACGGTGTTCTTGAGGC+AGG | + | chr8.2:82687633-82687652 | MS.gene99148:CDS | 55.0% | |
GCTGTCTGTGAGCCATCTGT+TGG | + | chr8.2:82687741-82687760 | MS.gene99148:CDS | 55.0% | |
GGACCGCATAAGCTGACTGT+TGG | - | chr8.2:82687028-82687047 | None:intergenic | 55.0% | |
TGAGGCAGGGAAAAAGGCAG+AGG | + | chr8.2:82687647-82687666 | MS.gene99148:CDS | 55.0% | |
! | CGTCAAAAGGAGATGGTGGC+TGG | + | chr8.2:82685712-82685731 | MS.gene99148:CDS | 55.0% |
!! | GTGATGGGTGAAGGTGTTGG+AGG | + | chr8.2:82685634-82685653 | MS.gene99148:CDS | 55.0% |
ACGTGTTTGCGCAGATGCGG+AGG | + | chr8.2:82687596-82687615 | MS.gene99148:CDS | 60.0% | |
!! | GGGTGAAGGTGTTGGAGGCA+CGG | + | chr8.2:82685639-82685658 | MS.gene99148:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.2 | gene | 82685247 | 82688270 | 82685247 | ID=MS.gene99148 |
chr8.2 | mRNA | 82685247 | 82688270 | 82685247 | ID=MS.gene99148.t1;Parent=MS.gene99148 |
chr8.2 | exon | 82685247 | 82685937 | 82685247 | ID=MS.gene99148.t1.exon1;Parent=MS.gene99148.t1 |
chr8.2 | CDS | 82685247 | 82685937 | 82685247 | ID=cds.MS.gene99148.t1;Parent=MS.gene99148.t1 |
chr8.2 | exon | 82686392 | 82687822 | 82686392 | ID=MS.gene99148.t1.exon2;Parent=MS.gene99148.t1 |
chr8.2 | CDS | 82686392 | 82687822 | 82686392 | ID=cds.MS.gene99148.t1;Parent=MS.gene99148.t1 |
chr8.2 | exon | 82688260 | 82688270 | 82688260 | ID=MS.gene99148.t1.exon3;Parent=MS.gene99148.t1 |
chr8.2 | CDS | 82688260 | 82688270 | 82688260 | ID=cds.MS.gene99148.t1;Parent=MS.gene99148.t1 |
Gene Sequence |
Protein sequence |