Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99386.t1 | XP_003617086.1 | 94.6 | 625 | 24 | 1 | 1 | 625 | 1 | 615 | 0.00E+00 | 1154.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99386.t1 | O24606 | 69.7 | 511 | 135 | 7 | 2 | 508 | 1 | 495 | 1.2e-197 | 691.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99386.t1 | G7K2Y0 | 94.6 | 625 | 24 | 1 | 1 | 625 | 1 | 615 | 0.0e+00 | 1154.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene99386.t1 | TF | EIL |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99386.t1 | MTR_5g087790 | 97.280 | 625 | 7 | 1 | 1 | 625 | 1 | 615 | 0.0 | 1268 |
| MS.gene99386.t1 | MTR_3g078770 | 67.125 | 654 | 156 | 21 | 1 | 623 | 2 | 627 | 0.0 | 802 |
| MS.gene99386.t1 | MTR_2g098470 | 63.961 | 308 | 100 | 4 | 35 | 333 | 24 | 329 | 1.41e-133 | 405 |
| MS.gene99386.t1 | MTR_3g087530 | 62.791 | 258 | 85 | 4 | 46 | 298 | 29 | 280 | 9.79e-110 | 337 |
| MS.gene99386.t1 | MTR_6g460640 | 38.462 | 520 | 282 | 11 | 37 | 550 | 31 | 518 | 6.33e-107 | 337 |
| MS.gene99386.t1 | MTR_6g060600 | 50.000 | 314 | 149 | 4 | 26 | 338 | 20 | 326 | 5.93e-106 | 334 |
| MS.gene99386.t1 | MTR_8g091370 | 60.227 | 264 | 97 | 4 | 39 | 298 | 12 | 271 | 3.95e-105 | 325 |
| MS.gene99386.t1 | MTR_3g010790 | 55.702 | 228 | 100 | 1 | 103 | 330 | 1 | 227 | 2.30e-87 | 281 |
| MS.gene99386.t1 | MTR_1g024420 | 44.231 | 104 | 56 | 1 | 44 | 145 | 5 | 108 | 4.35e-27 | 106 |
| MS.gene99386.t1 | MTR_7g095580 | 43.269 | 104 | 47 | 3 | 92 | 186 | 1 | 101 | 1.69e-18 | 81.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99386.t1 | AT3G20770 | 61.035 | 657 | 191 | 13 | 2 | 623 | 1 | 627 | 0.0 | 744 |
| MS.gene99386.t1 | AT2G27050 | 59.594 | 641 | 183 | 20 | 1 | 623 | 1 | 583 | 0.0 | 673 |
| MS.gene99386.t1 | AT1G73730 | 61.682 | 321 | 92 | 6 | 34 | 336 | 11 | 318 | 1.24e-131 | 397 |
| MS.gene99386.t1 | AT1G73730 | 61.682 | 321 | 92 | 6 | 34 | 336 | 23 | 330 | 1.36e-131 | 398 |
| MS.gene99386.t1 | AT5G21120 | 48.086 | 418 | 182 | 9 | 22 | 432 | 24 | 413 | 1.33e-114 | 352 |
| MS.gene99386.t1 | AT5G21120 | 48.086 | 418 | 182 | 9 | 22 | 432 | 24 | 413 | 1.33e-114 | 352 |
| MS.gene99386.t1 | AT5G21120 | 48.086 | 418 | 182 | 9 | 22 | 432 | 31 | 420 | 1.37e-114 | 353 |
| MS.gene99386.t1 | AT5G10120 | 57.818 | 275 | 109 | 4 | 28 | 298 | 4 | 275 | 2.13e-105 | 327 |
| MS.gene99386.t1 | AT5G65100 | 43.427 | 426 | 188 | 11 | 44 | 429 | 33 | 445 | 1.47e-100 | 317 |
Find 189 sgRNAs with CRISPR-Local
Find 216 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGGCACAAGGCTTTGTTTA+TGG | 0.190580 | 5.1:-69188478 | MS.gene99386:CDS |
| ACCTCGGTAGCATGAAAATT+AGG | 0.199653 | 5.1:+69187482 | None:intergenic |
| CCACCTTCATTCGATTTAAC+TGG | 0.245739 | 5.1:-69187392 | MS.gene99386:CDS |
| GGTGGAGGGCCTTGATCTTT+AGG | 0.277617 | 5.1:+69188124 | None:intergenic |
| TTTAACTGGGTTTGGAGTTT+CGG | 0.307024 | 5.1:-69187378 | MS.gene99386:CDS |
| AAGCTTTGTGGGAAAATAAC+TGG | 0.313704 | 5.1:+69187455 | None:intergenic |
| GCAGGCTGAACTGTAGAATT+AGG | 0.320347 | 5.1:+69187425 | None:intergenic |
| GATCTTTAGGCAAACCGATC+TGG | 0.332130 | 5.1:+69188137 | None:intergenic |
| AGGCACAAGGCTTTGTTTAT+GGG | 0.334965 | 5.1:-69188477 | MS.gene99386:CDS |
| ATCTGCTTGATACTTGGATA+TGG | 0.336300 | 5.1:+69188357 | None:intergenic |
| GTATGGTTCTTCATGTGATT+TGG | 0.348025 | 5.1:-69187048 | MS.gene99386:CDS |
| ACACACCTTGCAAGAATTAC+AGG | 0.349517 | 5.1:-69188284 | MS.gene99386:CDS |
| TCATCCTCGACCACCGAATC+TGG | 0.353514 | 5.1:+69188712 | None:intergenic |
| TGCGTTATCTGCTTGATACT+TGG | 0.353824 | 5.1:+69188351 | None:intergenic |
| AAGCCAGGTTGCGCTTTCCT+TGG | 0.356760 | 5.1:+69187964 | None:intergenic |
| AACAACAAGATGTTTCAATA+TGG | 0.364077 | 5.1:-69186962 | MS.gene99386:CDS |
| CCTTTCAAGATAGGTCTTCC+AGG | 0.366977 | 5.1:-69187565 | MS.gene99386:CDS |
| TTGCATCCATCATTCTTTCC+TGG | 0.368112 | 5.1:+69188325 | None:intergenic |
| ATCTTTAGGCAAACCGATCT+GGG | 0.368749 | 5.1:+69188138 | None:intergenic |
| TACCTCCACCAGAGGATAAC+GGG | 0.368904 | 5.1:+69187885 | None:intergenic |
| AAGTCATGAGGTTTCTTGTA+TGG | 0.369753 | 5.1:+69188103 | None:intergenic |
| ATTATTGTTGTTGTTGAGGT+TGG | 0.371583 | 5.1:+69187082 | None:intergenic |
| TTGCGAATCTTGGCTATATC+AGG | 0.374628 | 5.1:+69188028 | None:intergenic |
| GTCCTGTTGTTGCTGAATGA+TGG | 0.379003 | 5.1:+69187205 | None:intergenic |
| CCTCCACCATGGTGGCCAAC+CGG | 0.379505 | 5.1:-69188178 | MS.gene99386:CDS |
| ATCAATTCCTTCTTTAGCCT+TGG | 0.381143 | 5.1:+69188603 | None:intergenic |
| TCATTCGATTTAACTGGGTT+TGG | 0.382118 | 5.1:-69187386 | MS.gene99386:CDS |
| TTCAATAACTACACAATTGG+TGG | 0.384657 | 5.1:+69187280 | None:intergenic |
| CCTCACGAGCTTGCGAATCT+TGG | 0.387734 | 5.1:+69188018 | None:intergenic |
| TGGTGGAGGTACTGGTTCTA+TGG | 0.388085 | 5.1:-69187873 | MS.gene99386:CDS |
| GGTTTCAAAAGGAGAGTTCA+TGG | 0.396115 | 5.1:+69187103 | None:intergenic |
| TTATCCTCTGGTGGAGGTAC+TGG | 0.399202 | 5.1:-69187881 | MS.gene99386:CDS |
| AATCTTCATCCATCCAATCT+TGG | 0.400017 | 5.1:-69187770 | MS.gene99386:CDS |
| CATTCTATCCATCCCAAGAT+TGG | 0.409448 | 5.1:+69187757 | None:intergenic |
| TTGTGGTACACTTGGGGAAG+GGG | 0.411806 | 5.1:-69188761 | MS.gene99386:CDS |
| TAGGTTGAACAAAGCTTTGT+GGG | 0.411860 | 5.1:+69187444 | None:intergenic |
| AGAAACAGTCCTGCAGGTTA+TGG | 0.412726 | 5.1:-69187509 | MS.gene99386:CDS |
| CTCGCCTTGCCTTTCAAGAT+AGG | 0.415938 | 5.1:-69187574 | MS.gene99386:CDS |
| CAAGCAGATAACGCAATTCC+AGG | 0.415992 | 5.1:-69188343 | MS.gene99386:CDS |
| TTGATTGATGATGGCAAGCC+AGG | 0.425788 | 5.1:+69187949 | None:intergenic |
| AATAATATGCATCCCATGTA+TGG | 0.430283 | 5.1:-69187065 | MS.gene99386:CDS |
| TCCTGTTGTTGCTGAATGAT+GGG | 0.434795 | 5.1:+69187206 | None:intergenic |
| ATCTTCATCCATCCAATCTT+GGG | 0.436018 | 5.1:-69187769 | MS.gene99386:CDS |
| GGCAAGGCAGTCTCAAGAAC+AGG | 0.441318 | 5.1:-69188572 | MS.gene99386:CDS |
| TGATGAGAAGGTTGCTGCAC+TGG | 0.445924 | 5.1:+69187722 | None:intergenic |
| TGAGGTTTCTTGTATGGTGG+AGG | 0.446444 | 5.1:+69188109 | None:intergenic |
| TTGTTGAGGTTGGTTTCAAA+AGG | 0.451254 | 5.1:+69187092 | None:intergenic |
| GGGAGAGGTTGTCACAAACT+TGG | 0.451465 | 5.1:-69187693 | MS.gene99386:CDS |
| CCTCGGTAGCATGAAAATTA+GGG | 0.456819 | 5.1:+69187483 | None:intergenic |
| CACCTTCATTCGATTTAACT+GGG | 0.462918 | 5.1:-69187391 | MS.gene99386:CDS |
| GGCTATGATACACATGTTAT+AGG | 0.462962 | 5.1:-69187320 | MS.gene99386:CDS |
| TCACAAACTTGGATTTCATT+CGG | 0.464079 | 5.1:-69187682 | MS.gene99386:CDS |
| TGATTATAGTGATGAAGAAA+TGG | 0.464489 | 5.1:-69188692 | MS.gene99386:CDS |
| GGATTCCTCTTGATTGATGA+TGG | 0.464516 | 5.1:+69187940 | None:intergenic |
| TTTGTGGTACACTTGGGGAA+GGG | 0.466355 | 5.1:-69188762 | MS.gene99386:CDS |
| GCCCATCATTCAGCAACAAC+AGG | 0.469177 | 5.1:-69187207 | MS.gene99386:CDS |
| GGCCAACCGGGACTGAAGAC+TGG | 0.469478 | 5.1:-69188165 | MS.gene99386:CDS |
| TTGGATGGATGAAGATTCTC+GGG | 0.470657 | 5.1:+69187776 | None:intergenic |
| GCATATTATTGTTGTTGTTG+AGG | 0.474406 | 5.1:+69187078 | None:intergenic |
| CAGGCAAACCGAGCCAGATT+CGG | 0.479153 | 5.1:-69188725 | MS.gene99386:CDS |
| TCGTGAATGGTGGAAGGATA+AGG | 0.479265 | 5.1:-69188407 | MS.gene99386:CDS |
| GAAAATGATGGAGGTTTGTA+AGG | 0.484505 | 5.1:-69188497 | MS.gene99386:CDS |
| TCCTCAGAGGCGTTTCCCAT+TGG | 0.490597 | 5.1:-69188212 | MS.gene99386:CDS |
| GAGAGTTCATGGCCTTGAAC+CGG | 0.490862 | 5.1:+69187114 | None:intergenic |
| AAGGGGATATTTCTTCTGTC+AGG | 0.493214 | 5.1:-69188744 | MS.gene99386:CDS |
| GAGGATTGCCCTTCTCCAAT+GGG | 0.493994 | 5.1:+69188197 | None:intergenic |
| ACGAAGATTGTCAGATGCTC+CGG | 0.495666 | 5.1:+69188426 | None:intergenic |
| ATTGGATGGATGAAGATTCT+CGG | 0.495807 | 5.1:+69187775 | None:intergenic |
| AATTCCCGAGAAGGGAAAAC+CGG | 0.496336 | 5.1:-69188452 | MS.gene99386:CDS |
| TTGTCAGATGCTCCGGTCAC+CGG | 0.496468 | 5.1:+69188433 | None:intergenic |
| GCAACCTTCTCATCAAATCA+AGG | 0.497251 | 5.1:-69187714 | MS.gene99386:CDS |
| GGGCCACCAGTCTTCAGTCC+CGG | 0.499009 | 5.1:+69188159 | None:intergenic |
| CCGGTTGGCCACCATGGTGG+AGG | 0.499341 | 5.1:+69188178 | None:intergenic |
| AAATCAGTTTGACCGGTTCA+AGG | 0.500225 | 5.1:-69187126 | MS.gene99386:CDS |
| CATCAATCAAGAGGAATCCT+TGG | 0.505411 | 5.1:-69187936 | MS.gene99386:CDS |
| GATGATGATGTTTGAGGACA+TGG | 0.505605 | 5.1:-69188809 | MS.gene99386:CDS |
| TCTTGCAAGGTGTGTGGAGT+TGG | 0.508004 | 5.1:+69188292 | None:intergenic |
| TGCAGTGAGTATGATGTTGA+TGG | 0.508204 | 5.1:-69187839 | MS.gene99386:CDS |
| ATGATCAGCGACCTTATGTC+AGG | 0.516438 | 5.1:-69187341 | MS.gene99386:CDS |
| CGAGCCAGATTCGGTGGTCG+AGG | 0.516671 | 5.1:-69188716 | MS.gene99386:CDS |
| CTCGACCACCGAATCTGGCT+CGG | 0.517344 | 5.1:+69188717 | None:intergenic |
| GAATTACAGGACACAACCTT+GGG | 0.517537 | 5.1:-69188271 | MS.gene99386:CDS |
| TAACGACTTCAACATGATGA+TGG | 0.518203 | 5.1:-69187645 | MS.gene99386:CDS |
| GGAGGATTGCCCTTCTCCAA+TGG | 0.519182 | 5.1:+69188196 | None:intergenic |
| ATCGGTTTGCCTAAAGATCA+AGG | 0.519416 | 5.1:-69188133 | MS.gene99386:CDS |
| ATGAGCTTGAGCGGAGGATG+TGG | 0.520497 | 5.1:-69188663 | MS.gene99386:CDS |
| ATCACATGAAGAACCATACA+TGG | 0.521967 | 5.1:+69187052 | None:intergenic |
| AGAATTACAGGACACAACCT+TGG | 0.524464 | 5.1:-69188272 | MS.gene99386:CDS |
| CTCCACCATGGTGGCCAACC+GGG | 0.526692 | 5.1:-69188177 | MS.gene99386:CDS |
| GTGTATCATAGCCTGACATA+AGG | 0.531266 | 5.1:+69187330 | None:intergenic |
| GAGGCGTTTCCCATTGGAGA+AGG | 0.531537 | 5.1:-69188206 | MS.gene99386:CDS |
| GAGGTTTCTTGTATGGTGGA+GGG | 0.533491 | 5.1:+69188110 | None:intergenic |
| GCAATTCCAGGAAAGAATGA+TGG | 0.536106 | 5.1:-69188331 | MS.gene99386:CDS |
| TCTCCCTTGATTTGATGAGA+AGG | 0.537373 | 5.1:+69187710 | None:intergenic |
| ATTCAATTGATGATTGTCCC+TGG | 0.537403 | 5.1:+69187547 | None:intergenic |
| ATCTTGGGATGGATAGAATG+AGG | 0.537865 | 5.1:-69187754 | MS.gene99386:CDS |
| TAGATCCTCCTTAAAATCAA+AGG | 0.539849 | 5.1:+69187022 | None:intergenic |
| GTACCTCCACCAGAGGATAA+CGG | 0.539881 | 5.1:+69187884 | None:intergenic |
| TCAGTCCCGGTTGGCCACCA+TGG | 0.540302 | 5.1:+69188172 | None:intergenic |
| ACTTGGATTTCATTCGGAAG+AGG | 0.540565 | 5.1:-69187676 | MS.gene99386:CDS |
| TTAGGTTGAACAAAGCTTTG+TGG | 0.541625 | 5.1:+69187443 | None:intergenic |
| GGGTTTGGAGTTTCGGAGGA+CGG | 0.542268 | 5.1:-69187371 | MS.gene99386:CDS |
| GAACAAACCAAGGCTAAAGA+AGG | 0.542936 | 5.1:-69188610 | MS.gene99386:CDS |
| TTTGAATCAAGGAATGGTGA+TGG | 0.544516 | 5.1:-69187174 | MS.gene99386:CDS |
| CAGCCAAGGAAAGCGCAACC+TGG | 0.544615 | 5.1:-69187967 | MS.gene99386:CDS |
| GAAGTACATGCTGAAAATGA+TGG | 0.545558 | 5.1:-69188509 | MS.gene99386:CDS |
| AGCTTGAGCGGAGGATGTGG+AGG | 0.545764 | 5.1:-69188660 | MS.gene99386:CDS |
| GAGAAGGGAAAACCGGTGAC+CGG | 0.547110 | 5.1:-69188445 | MS.gene99386:CDS |
| AGAAACAGAAACAGTCCTGC+AGG | 0.548675 | 5.1:-69187515 | MS.gene99386:CDS |
| GGACTGTTTCTGTTTCTATG+TGG | 0.550312 | 5.1:+69187521 | None:intergenic |
| TGATACTTGGATATGGCAGC+AGG | 0.550770 | 5.1:+69188364 | None:intergenic |
| GAAGGTGGAACTAAACTAGC+AGG | 0.551330 | 5.1:+69187407 | None:intergenic |
| AGGATAAGGTTCGGTTCGAT+AGG | 0.552012 | 5.1:-69188393 | MS.gene99386:CDS |
| TTAGGGTCGCCATAACCTGC+AGG | 0.552645 | 5.1:+69187500 | None:intergenic |
| GCTGAATGATGGGCTGAGAA+AGG | 0.553081 | 5.1:+69187216 | None:intergenic |
| GCTGAATGATGGGCTGAGAA+AGG | 0.553081 | 5.1:+69187249 | None:intergenic |
| TTCTCATCAAATCAAGGGAG+AGG | 0.554659 | 5.1:-69187708 | MS.gene99386:CDS |
| CTTTCAAGATAGGTCTTCCA+GGG | 0.555713 | 5.1:-69187564 | MS.gene99386:CDS |
| TATGGGATAATTCCCGAGAA+GGG | 0.556990 | 5.1:-69188460 | MS.gene99386:CDS |
| GGAAAAGATGATGATGTTTG+AGG | 0.557260 | 5.1:-69188815 | None:intergenic |
| CTATCCATCCCAAGATTGGA+TGG | 0.557944 | 5.1:+69187761 | None:intergenic |
| CTGACAATCTTCGTGAATGG+TGG | 0.558385 | 5.1:-69188417 | MS.gene99386:CDS |
| GGTGTGTGGAGTTGGACCTA+TGG | 0.558968 | 5.1:+69188300 | None:intergenic |
| CCTGGAAGACCTATCTTGAA+AGG | 0.560673 | 5.1:+69187565 | None:intergenic |
| CTACAACTACAAGGAGGAGT+AGG | 0.563021 | 5.1:-69187002 | MS.gene99386:CDS |
| AACCCAGTTAAATCGAATGA+AGG | 0.563631 | 5.1:+69187389 | None:intergenic |
| GCGAGGAAAATCAGTTTGAC+CGG | 0.565875 | 5.1:-69187133 | MS.gene99386:CDS |
| CATCTGACAATCTTCGTGAA+TGG | 0.567255 | 5.1:-69188420 | MS.gene99386:CDS |
| CCAAGATTCGCAAGCTCGTG+AGG | 0.567603 | 5.1:-69188018 | MS.gene99386:CDS |
| TCATGAGGTTTCTTGTATGG+TGG | 0.567990 | 5.1:+69188106 | None:intergenic |
| CACCAGTCTTCAGTCCCGGT+TGG | 0.570122 | 5.1:+69188163 | None:intergenic |
| TTATGGGATAATTCCCGAGA+AGG | 0.572124 | 5.1:-69188461 | MS.gene99386:CDS |
| AATGGTGGAAGGATAAGGTT+CGG | 0.572803 | 5.1:-69188402 | MS.gene99386:CDS |
| AGGCGTTTCCCATTGGAGAA+GGG | 0.573544 | 5.1:-69188205 | MS.gene99386:CDS |
| GGCAGTCTCAAGAACAGGCA+AGG | 0.574300 | 5.1:-69188567 | MS.gene99386:CDS |
| AGAAGGAATTGATGCTGCAA+AGG | 0.574701 | 5.1:-69188593 | MS.gene99386:CDS |
| GCAGTGAGTATGATGTTGAT+GGG | 0.574936 | 5.1:-69187838 | MS.gene99386:CDS |
| GTCCCGGTTGGCCACCATGG+TGG | 0.575585 | 5.1:+69188175 | None:intergenic |
| TGGATATAGTTCTCGAGCCA+AGG | 0.577085 | 5.1:+69187919 | None:intergenic |
| AACTGGGTTTGGAGTTTCGG+AGG | 0.578482 | 5.1:-69187375 | MS.gene99386:CDS |
| AATGATGGATGCAATTCCAT+AGG | 0.584074 | 5.1:-69188316 | MS.gene99386:CDS |
| CGAGTCAAACTTTGATGTGG+AGG | 0.584361 | 5.1:-69187807 | MS.gene99386:CDS |
| AATGGGAAACGCCTCTGAGG+AGG | 0.586375 | 5.1:+69188214 | None:intergenic |
| TGCTGATAAGAGAGAACCCA+AGG | 0.586902 | 5.1:+69188255 | None:intergenic |
| TAGTGATGAAGAAATGGATG+TGG | 0.587114 | 5.1:-69188686 | MS.gene99386:CDS |
| TGTAATTCTTGCAAGGTGTG+TGG | 0.593213 | 5.1:+69188286 | None:intergenic |
| TGTGTCCTGTAATTCTTGCA+AGG | 0.594212 | 5.1:+69188279 | None:intergenic |
| TCTTGGGATGGATAGAATGA+GGG | 0.594489 | 5.1:-69187753 | MS.gene99386:CDS |
| TCAAGATAAAATGACAGCCA+AGG | 0.597129 | 5.1:-69187981 | MS.gene99386:CDS |
| TCATCCATCCAATCTTGGGA+TGG | 0.598664 | 5.1:-69187765 | MS.gene99386:CDS |
| CCAGTTAAATCGAATGAAGG+TGG | 0.598931 | 5.1:+69187392 | None:intergenic |
| CTTGGGATGGATAGAATGAG+GGG | 0.601634 | 5.1:-69187752 | MS.gene99386:CDS |
| CAATCTTCGTGAATGGTGGA+AGG | 0.601878 | 5.1:-69188413 | MS.gene99386:CDS |
| CAACCTTCTCATCAAATCAA+GGG | 0.606873 | 5.1:-69187713 | MS.gene99386:CDS |
| AAGGAGGATCTACAACTACA+AGG | 0.608788 | 5.1:-69187011 | MS.gene99386:CDS |
| AAGGTTCGGTTCGATAGGAA+TGG | 0.610184 | 5.1:-69188388 | MS.gene99386:CDS |
| GCAAACCGAGCCAGATTCGG+TGG | 0.610299 | 5.1:-69188722 | MS.gene99386:CDS |
| ACTACAAGGAGGAGTAGGAA+TGG | 0.611304 | 5.1:-69186997 | MS.gene99386:CDS |
| AAGATGTCAAGAGCTCAAGA+TGG | 0.612194 | 5.1:-69188538 | MS.gene99386:CDS |
| GCTTCGCTGTAAGCGCATTG+AGG | 0.613195 | 5.1:+69187596 | None:intergenic |
| CGGCGAGTCAAACTTTGATG+TGG | 0.614982 | 5.1:-69187810 | MS.gene99386:CDS |
| TCCAATGGGAAACGCCTCTG+AGG | 0.618975 | 5.1:+69188211 | None:intergenic |
| GAAGACTGGTGGCCCCAGAT+CGG | 0.620125 | 5.1:-69188151 | MS.gene99386:CDS |
| AAGACCTATCTTGAAAGGCA+AGG | 0.620631 | 5.1:+69187570 | None:intergenic |
| TATGATGTTGATGGGGCTGA+CGG | 0.622733 | 5.1:-69187830 | MS.gene99386:CDS |
| GCTTGCCATCATCAATCAAG+AGG | 0.624863 | 5.1:-69187945 | MS.gene99386:CDS |
| GAATTGATGCTGCAAAGGCA+AGG | 0.624873 | 5.1:-69188588 | MS.gene99386:CDS |
| GAATCAAGGAATGGTGATGG+AGG | 0.630262 | 5.1:-69187171 | MS.gene99386:CDS |
| ATGGAGGTTTGTAAGGCACA+AGG | 0.638043 | 5.1:-69188490 | MS.gene99386:CDS |
| GAAAATAACTGGCTTAACCT+CGG | 0.643010 | 5.1:+69187466 | None:intergenic |
| GCTTGAGCGGAGGATGTGGA+GGG | 0.653404 | 5.1:-69188659 | MS.gene99386:CDS |
| AGTCTCAAGAACAGGCAAGG+AGG | 0.658159 | 5.1:-69188564 | MS.gene99386:CDS |
| TGGATGTGGATGAGCTTGAG+CGG | 0.660750 | 5.1:-69188672 | MS.gene99386:CDS |
| CAACCGGGACTGAAGACTGG+TGG | 0.661902 | 5.1:-69188162 | MS.gene99386:CDS |
| TCTTTAGGCAAACCGATCTG+GGG | 0.665997 | 5.1:+69188139 | None:intergenic |
| ATGATGATGTTTGAGGACAT+GGG | 0.668420 | 5.1:-69188808 | MS.gene99386:CDS |
| AGCACTGCGATCCTCCTCAG+AGG | 0.670631 | 5.1:-69188225 | MS.gene99386:CDS |
| ACCTCCACCAGAGGATAACG+GGG | 0.673590 | 5.1:+69187886 | None:intergenic |
| TCACATGAAGAACCATACAT+GGG | 0.685805 | 5.1:+69187053 | None:intergenic |
| GCGACTGAAAGAACAAACCA+AGG | 0.688069 | 5.1:-69188620 | MS.gene99386:CDS |
| CAGTGAGTATGATGTTGATG+GGG | 0.693933 | 5.1:-69187837 | MS.gene99386:CDS |
| AGGGCAATCCTCCACCATGG+TGG | 0.709968 | 5.1:-69188186 | MS.gene99386:CDS |
| ATGTGGATGAGCTTGAGCGG+AGG | 0.710465 | 5.1:-69188669 | MS.gene99386:CDS |
| AGAAGGGCAATCCTCCACCA+TGG | 0.713618 | 5.1:-69188189 | MS.gene99386:CDS |
| AGAACCAGTACCTCCACCAG+AGG | 0.719646 | 5.1:+69187877 | None:intergenic |
| GTACATGCTGAAAATGATGG+AGG | 0.724912 | 5.1:-69188506 | MS.gene99386:CDS |
| CTCCACCAGAGGATAACGGG+GGG | 0.729921 | 5.1:+69187888 | None:intergenic |
| CCTCCACCAGAGGATAACGG+GGG | 0.744768 | 5.1:+69187887 | None:intergenic |
| GAGGATCTACAACTACAAGG+AGG | 0.776973 | 5.1:-69187008 | MS.gene99386:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTCAATAACTACACAAT+TGG | + | chr5.1:69188487-69188506 | None:intergenic | 20.0% |
| ! | AACAACAAGATGTTTCAATA+TGG | - | chr5.1:69188799-69188818 | MS.gene99386:CDS | 25.0% |
| ! | TGATTATAGTGATGAAGAAA+TGG | - | chr5.1:69187069-69187088 | MS.gene99386:CDS | 25.0% |
| !! | GACAATTTCTTTTTGAATCA+AGG | - | chr5.1:69188576-69188595 | MS.gene99386:CDS | 25.0% |
| !! | TTTCTTTTTGAATCAAGGAA+TGG | - | chr5.1:69188581-69188600 | MS.gene99386:CDS | 25.0% |
| AATAATATGCATCCCATGTA+TGG | - | chr5.1:69188696-69188715 | MS.gene99386:CDS | 30.0% | |
| TAGATCCTCCTTAAAATCAA+AGG | + | chr5.1:69188742-69188761 | None:intergenic | 30.0% | |
| TCACAAACTTGGATTTCATT+CGG | - | chr5.1:69188079-69188098 | MS.gene99386:CDS | 30.0% | |
| TTCAATAACTACACAATTGG+TGG | + | chr5.1:69188484-69188503 | None:intergenic | 30.0% | |
| ! | ATTATTGTTGTTGTTGAGGT+TGG | + | chr5.1:69188682-69188701 | None:intergenic | 30.0% |
| ! | GCATATTATTGTTGTTGTTG+AGG | + | chr5.1:69188686-69188705 | None:intergenic | 30.0% |
| ! | TTGAAAAAAGCATGGAAAGT+TGG | - | chr5.1:69187679-69187698 | MS.gene99386:CDS | 30.0% |
| !! | TTTGGCATCCTTTGATTTTA+AGG | - | chr5.1:69188731-69188750 | MS.gene99386:CDS | 30.0% |
| !!! | CATTTTATCTTGAAGGCATT+TGG | + | chr5.1:69187773-69187792 | None:intergenic | 30.0% |
| !!! | TTTTGTTGTTGCTGAATGAT+GGG | + | chr5.1:69188525-69188544 | None:intergenic | 30.0% |
| AACCCAGTTAAATCGAATGA+AGG | + | chr5.1:69188375-69188394 | None:intergenic | 35.0% | |
| AAGTCATGAGGTTTCTTGTA+TGG | + | chr5.1:69187661-69187680 | None:intergenic | 35.0% | |
| AATCTTCATCCATCCAATCT+TGG | - | chr5.1:69187991-69188010 | MS.gene99386:CDS | 35.0% | |
| ATCAATTCCTTCTTTAGCCT+TGG | + | chr5.1:69187161-69187180 | None:intergenic | 35.0% | |
| ATCACATGAAGAACCATACA+TGG | + | chr5.1:69188712-69188731 | None:intergenic | 35.0% | |
| ATCTGCTTGATACTTGGATA+TGG | + | chr5.1:69187407-69187426 | None:intergenic | 35.0% | |
| ATCTTCATCCATCCAATCTT+GGG | - | chr5.1:69187992-69188011 | MS.gene99386:CDS | 35.0% | |
| ATTGGATGGATGAAGATTCT+CGG | + | chr5.1:69187989-69188008 | None:intergenic | 35.0% | |
| CAACCTTCTCATCAAATCAA+GGG | - | chr5.1:69188048-69188067 | MS.gene99386:CDS | 35.0% | |
| CACCTTCATTCGATTTAACT+GGG | - | chr5.1:69188370-69188389 | MS.gene99386:CDS | 35.0% | |
| CTCATGACTTGAAAAAAGCA+TGG | - | chr5.1:69187671-69187690 | MS.gene99386:CDS | 35.0% | |
| GAAGTACATGCTGAAAATGA+TGG | - | chr5.1:69187252-69187271 | MS.gene99386:CDS | 35.0% | |
| GGCTATGATACACATGTTAT+AGG | - | chr5.1:69188441-69188460 | MS.gene99386:CDS | 35.0% | |
| GTATGGTTCTTCATGTGATT+TGG | - | chr5.1:69188713-69188732 | MS.gene99386:CDS | 35.0% | |
| TAACGACTTCAACATGATGA+TGG | - | chr5.1:69188116-69188135 | MS.gene99386:CDS | 35.0% | |
| TAGTGATGAAGAAATGGATG+TGG | - | chr5.1:69187075-69187094 | MS.gene99386:CDS | 35.0% | |
| TCAAGATAAAATGACAGCCA+AGG | - | chr5.1:69187780-69187799 | MS.gene99386:CDS | 35.0% | |
| TCACATGAAGAACCATACAT+GGG | + | chr5.1:69188711-69188730 | None:intergenic | 35.0% | |
| TCATTCGATTTAACTGGGTT+TGG | - | chr5.1:69188375-69188394 | MS.gene99386:CDS | 35.0% | |
| TTTGAATCAAGGAATGGTGA+TGG | - | chr5.1:69188587-69188606 | MS.gene99386:CDS | 35.0% | |
| ! | AAGCTTTGTGGGAAAATAAC+TGG | + | chr5.1:69188309-69188328 | None:intergenic | 35.0% |
| ! | ATGATGATGTTTGAGGACAT+GGG | - | chr5.1:69186953-69186972 | MS.gene99386:CDS | 35.0% |
| ! | ATGTGTTTTGTGGTACACTT+GGG | - | chr5.1:69186993-69187012 | MS.gene99386:CDS | 35.0% |
| ! | ATTCAATTGATGATTGTCCC+TGG | + | chr5.1:69188217-69188236 | None:intergenic | 35.0% |
| ! | GAAAATAACTGGCTTAACCT+CGG | + | chr5.1:69188298-69188317 | None:intergenic | 35.0% |
| ! | GAAAATGATGGAGGTTTGTA+AGG | - | chr5.1:69187264-69187283 | MS.gene99386:CDS | 35.0% |
| ! | TAGGTTGAACAAAGCTTTGT+GGG | + | chr5.1:69188320-69188339 | None:intergenic | 35.0% |
| ! | TTTAACTGGGTTTGGAGTTT+CGG | - | chr5.1:69188383-69188402 | MS.gene99386:CDS | 35.0% |
| !! | AATGATGGATGCAATTCCAT+AGG | - | chr5.1:69187445-69187464 | MS.gene99386:CDS | 35.0% |
| !! | TTAGGTTGAACAAAGCTTTG+TGG | + | chr5.1:69188321-69188340 | None:intergenic | 35.0% |
| !! | TTGTTGAGGTTGGTTTCAAA+AGG | + | chr5.1:69188672-69188691 | None:intergenic | 35.0% |
| !!! | CATGCTTTTTTCAAGTCATG+AGG | + | chr5.1:69187673-69187692 | None:intergenic | 35.0% |
| !!! | GTTTTGTTGTTGCTGAATGA+TGG | + | chr5.1:69188526-69188545 | None:intergenic | 35.0% |
| !!! | TGGCTGTCATTTTATCTTGA+AGG | + | chr5.1:69187780-69187799 | None:intergenic | 35.0% |
| AAGACCTATCTTGAAAGGCA+AGG | + | chr5.1:69188194-69188213 | None:intergenic | 40.0% | |
| AAGATGTCAAGAGCTCAAGA+TGG | - | chr5.1:69187223-69187242 | MS.gene99386:CDS | 40.0% | |
| AAGGAGGATCTACAACTACA+AGG | - | chr5.1:69188750-69188769 | MS.gene99386:CDS | 40.0% | |
| AAGGGGATATTTCTTCTGTC+AGG | - | chr5.1:69187017-69187036 | MS.gene99386:CDS | 40.0% | |
| ACACACCTTGCAAGAATTAC+AGG | - | chr5.1:69187477-69187496 | MS.gene99386:CDS | 40.0% | |
| ACCTCGGTAGCATGAAAATT+AGG | + | chr5.1:69188282-69188301 | None:intergenic | 40.0% | |
| ACTTGGATTTCATTCGGAAG+AGG | - | chr5.1:69188085-69188104 | MS.gene99386:CDS | 40.0% | |
| AGAAGGAATTGATGCTGCAA+AGG | - | chr5.1:69187168-69187187 | MS.gene99386:CDS | 40.0% | |
| AGAATTACAGGACACAACCT+TGG | - | chr5.1:69187489-69187508 | MS.gene99386:CDS | 40.0% | |
| ATCTTGGGATGGATAGAATG+AGG | - | chr5.1:69188007-69188026 | MS.gene99386:CDS | 40.0% | |
| ATCTTTAGGCAAACCGATCT+GGG | + | chr5.1:69187626-69187645 | None:intergenic | 40.0% | |
| CAGTGAGTATGATGTTGATG+GGG | - | chr5.1:69187924-69187943 | MS.gene99386:CDS | 40.0% | |
| CATCAATCAAGAGGAATCCT+TGG | - | chr5.1:69187825-69187844 | MS.gene99386:CDS | 40.0% | |
| CATCTGACAATCTTCGTGAA+TGG | - | chr5.1:69187341-69187360 | MS.gene99386:CDS | 40.0% | |
| CATTCTATCCATCCCAAGAT+TGG | + | chr5.1:69188007-69188026 | None:intergenic | 40.0% | |
| CCACCTTCATTCGATTTAAC+TGG | - | chr5.1:69188369-69188388 | MS.gene99386:CDS | 40.0% | |
| CCAGTTAAATCGAATGAAGG+TGG | + | chr5.1:69188372-69188391 | None:intergenic | 40.0% | |
| CCTCGGTAGCATGAAAATTA+GGG | + | chr5.1:69188281-69188300 | None:intergenic | 40.0% | |
| CTTTCAAGATAGGTCTTCCA+GGG | - | chr5.1:69188197-69188216 | MS.gene99386:CDS | 40.0% | |
| GAACAAACCAAGGCTAAAGA+AGG | - | chr5.1:69187151-69187170 | MS.gene99386:CDS | 40.0% | |
| GAATTACAGGACACAACCTT+GGG | - | chr5.1:69187490-69187509 | MS.gene99386:CDS | 40.0% | |
| GCAACCTTCTCATCAAATCA+AGG | - | chr5.1:69188047-69188066 | MS.gene99386:CDS | 40.0% | |
| GCAATTCCAGGAAAGAATGA+TGG | - | chr5.1:69187430-69187449 | MS.gene99386:CDS | 40.0% | |
| GCAGTGAGTATGATGTTGAT+GGG | - | chr5.1:69187923-69187942 | MS.gene99386:CDS | 40.0% | |
| GGATTCCTCTTGATTGATGA+TGG | + | chr5.1:69187824-69187843 | None:intergenic | 40.0% | |
| GGTTTCAAAAGGAGAGTTCA+TGG | + | chr5.1:69188661-69188680 | None:intergenic | 40.0% | |
| GTACATGCTGAAAATGATGG+AGG | - | chr5.1:69187255-69187274 | MS.gene99386:CDS | 40.0% | |
| GTGTATCATAGCCTGACATA+AGG | + | chr5.1:69188434-69188453 | None:intergenic | 40.0% | |
| TATGGGATAATTCCCGAGAA+GGG | - | chr5.1:69187301-69187320 | MS.gene99386:CDS | 40.0% | |
| TCATGAGGTTTCTTGTATGG+TGG | + | chr5.1:69187658-69187677 | None:intergenic | 40.0% | |
| TCCTGTTGTTGCTGAATGAT+GGG | + | chr5.1:69188558-69188577 | None:intergenic | 40.0% | |
| TCTTGGGATGGATAGAATGA+GGG | - | chr5.1:69188008-69188027 | MS.gene99386:CDS | 40.0% | |
| TGCAGTGAGTATGATGTTGA+TGG | - | chr5.1:69187922-69187941 | MS.gene99386:CDS | 40.0% | |
| TGCGTTATCTGCTTGATACT+TGG | + | chr5.1:69187413-69187432 | None:intergenic | 40.0% | |
| TGTAATTCTTGCAAGGTGTG+TGG | + | chr5.1:69187478-69187497 | None:intergenic | 40.0% | |
| TGTGTCCTGTAATTCTTGCA+AGG | + | chr5.1:69187485-69187504 | None:intergenic | 40.0% | |
| TTATGGGATAATTCCCGAGA+AGG | - | chr5.1:69187300-69187319 | MS.gene99386:CDS | 40.0% | |
| TTCTCATCAAATCAAGGGAG+AGG | - | chr5.1:69188053-69188072 | MS.gene99386:CDS | 40.0% | |
| TTGCATCCATCATTCTTTCC+TGG | + | chr5.1:69187439-69187458 | None:intergenic | 40.0% | |
| TTGCGAATCTTGGCTATATC+AGG | + | chr5.1:69187736-69187755 | None:intergenic | 40.0% | |
| TTGGATGGATGAAGATTCTC+GGG | + | chr5.1:69187988-69188007 | None:intergenic | 40.0% | |
| ! | AAATCAGTTTGACCGGTTCA+AGG | - | chr5.1:69188635-69188654 | MS.gene99386:CDS | 40.0% |
| ! | AATGGTGGAAGGATAAGGTT+CGG | - | chr5.1:69187359-69187378 | MS.gene99386:CDS | 40.0% |
| ! | CATGGGATTTTGTGGTGATT+TGG | - | chr5.1:69186970-69186989 | MS.gene99386:CDS | 40.0% |
| ! | GATGAAGATTCTCGGGTTTT+CGG | + | chr5.1:69187981-69188000 | None:intergenic | 40.0% |
| ! | GATGTGTTTTGTGGTACACT+TGG | - | chr5.1:69186992-69187011 | MS.gene99386:CDS | 40.0% |
| ! | TAAGGTCGCTGATCATTTTC+TGG | + | chr5.1:69188416-69188435 | None:intergenic | 40.0% |
| ! | TCTCCCTTGATTTGATGAGA+AGG | + | chr5.1:69188054-69188073 | None:intergenic | 40.0% |
| ! | TGCTCGCATGTGTACATTTT+CGG | + | chr5.1:69188144-69188163 | None:intergenic | 40.0% |
| ! | TGTGTTTTGTGGTACACTTG+GGG | - | chr5.1:69186994-69187013 | MS.gene99386:CDS | 40.0% |
| ! | TTTGAGGACATGGGATTTTG+TGG | - | chr5.1:69186962-69186981 | MS.gene99386:CDS | 40.0% |
| !! | AAGGCACAAGGCTTTGTTTA+TGG | - | chr5.1:69187283-69187302 | MS.gene99386:CDS | 40.0% |
| !! | AGGCACAAGGCTTTGTTTAT+GGG | - | chr5.1:69187284-69187303 | MS.gene99386:CDS | 40.0% |
| !! | ATCGGTTTGCCTAAAGATCA+AGG | - | chr5.1:69187628-69187647 | MS.gene99386:CDS | 40.0% |
| !! | GGACTGTTTCTGTTTCTATG+TGG | + | chr5.1:69188243-69188262 | None:intergenic | 40.0% |
| !! | GGCATCCTTTGATTTTAAGG+AGG | - | chr5.1:69188734-69188753 | MS.gene99386:CDS | 40.0% |
| !! | GGTGATTTGGATGTGTTTTG+TGG | - | chr5.1:69186983-69187002 | MS.gene99386:CDS | 40.0% |
| AATTCCCGAGAAGGGAAAAC+CGG | - | chr5.1:69187309-69187328 | MS.gene99386:CDS | 45.0% | |
| ACGAAGATTGTCAGATGCTC+CGG | + | chr5.1:69187338-69187357 | None:intergenic | 45.0% | |
| ACTACAAGGAGGAGTAGGAA+TGG | - | chr5.1:69188764-69188783 | MS.gene99386:CDS | 45.0% | |
| AGAAACAGAAACAGTCCTGC+AGG | - | chr5.1:69188246-69188265 | MS.gene99386:CDS | 45.0% | |
| AGAAACAGTCCTGCAGGTTA+TGG | - | chr5.1:69188252-69188271 | MS.gene99386:CDS | 45.0% | |
| ATGATCAGCGACCTTATGTC+AGG | - | chr5.1:69188420-69188439 | MS.gene99386:CDS | 45.0% | |
| ATGGAGGTTTGTAAGGCACA+AGG | - | chr5.1:69187271-69187290 | MS.gene99386:CDS | 45.0% | |
| CAAGCAGATAACGCAATTCC+AGG | - | chr5.1:69187418-69187437 | MS.gene99386:CDS | 45.0% | |
| CCTGGAAGACCTATCTTGAA+AGG | + | chr5.1:69188199-69188218 | None:intergenic | 45.0% | |
| CCTTTCAAGATAGGTCTTCC+AGG | - | chr5.1:69188196-69188215 | MS.gene99386:CDS | 45.0% | |
| CGAGTCAAACTTTGATGTGG+AGG | - | chr5.1:69187954-69187973 | MS.gene99386:CDS | 45.0% | |
| CTACAACTACAAGGAGGAGT+AGG | - | chr5.1:69188759-69188778 | MS.gene99386:CDS | 45.0% | |
| CTATCCATCCCAAGATTGGA+TGG | + | chr5.1:69188003-69188022 | None:intergenic | 45.0% | |
| CTGACAATCTTCGTGAATGG+TGG | - | chr5.1:69187344-69187363 | MS.gene99386:CDS | 45.0% | |
| CTTGGGATGGATAGAATGAG+GGG | - | chr5.1:69188009-69188028 | MS.gene99386:CDS | 45.0% | |
| GAAGGTGGAACTAAACTAGC+AGG | + | chr5.1:69188357-69188376 | None:intergenic | 45.0% | |
| GAATTGATGCTGCAAAGGCA+AGG | - | chr5.1:69187173-69187192 | MS.gene99386:CDS | 45.0% | |
| GAGGATCTACAACTACAAGG+AGG | - | chr5.1:69188753-69188772 | MS.gene99386:CDS | 45.0% | |
| GATCTTTAGGCAAACCGATC+TGG | + | chr5.1:69187627-69187646 | None:intergenic | 45.0% | |
| GCAGGCTGAACTGTAGAATT+AGG | + | chr5.1:69188339-69188358 | None:intergenic | 45.0% | |
| GCGACTGAAAGAACAAACCA+AGG | - | chr5.1:69187141-69187160 | MS.gene99386:CDS | 45.0% | |
| GCGAGGAAAATCAGTTTGAC+CGG | - | chr5.1:69188628-69188647 | MS.gene99386:CDS | 45.0% | |
| GCTTGCCATCATCAATCAAG+AGG | - | chr5.1:69187816-69187835 | MS.gene99386:CDS | 45.0% | |
| GTCCTGTTGTTGCTGAATGA+TGG | + | chr5.1:69188559-69188578 | None:intergenic | 45.0% | |
| TCATCCATCCAATCTTGGGA+TGG | - | chr5.1:69187996-69188015 | MS.gene99386:CDS | 45.0% | |
| TCTTTAGGCAAACCGATCTG+GGG | + | chr5.1:69187625-69187644 | None:intergenic | 45.0% | |
| TGAGGTTTCTTGTATGGTGG+AGG | + | chr5.1:69187655-69187674 | None:intergenic | 45.0% | |
| TGATACTTGGATATGGCAGC+AGG | + | chr5.1:69187400-69187419 | None:intergenic | 45.0% | |
| TGCTGATAAGAGAGAACCCA+AGG | + | chr5.1:69187509-69187528 | None:intergenic | 45.0% | |
| TGGATATAGTTCTCGAGCCA+AGG | + | chr5.1:69187845-69187864 | None:intergenic | 45.0% | |
| TTTGTGGTACACTTGGGGAA+GGG | - | chr5.1:69186999-69187018 | MS.gene99386:CDS | 45.0% | |
| ! | AAGGTTCGGTTCGATAGGAA+TGG | - | chr5.1:69187373-69187392 | MS.gene99386:CDS | 45.0% |
| ! | AGGATAAGGTTCGGTTCGAT+AGG | - | chr5.1:69187368-69187387 | MS.gene99386:CDS | 45.0% |
| ! | CAATCTTCGTGAATGGTGGA+AGG | - | chr5.1:69187348-69187367 | MS.gene99386:CDS | 45.0% |
| ! | CCCTAATTTTCATGCTACCG+AGG | - | chr5.1:69188278-69188297 | MS.gene99386:CDS | 45.0% |
| ! | GAGGTTTCTTGTATGGTGGA+GGG | + | chr5.1:69187654-69187673 | None:intergenic | 45.0% |
| ! | TATGATGTTGATGGGGCTGA+CGG | - | chr5.1:69187931-69187950 | MS.gene99386:CDS | 45.0% |
| ! | TCGTGAATGGTGGAAGGATA+AGG | - | chr5.1:69187354-69187373 | MS.gene99386:CDS | 45.0% |
| ! | TTTTGTGGTACACTTGGGGA+AGG | - | chr5.1:69186998-69187017 | MS.gene99386:CDS | 45.0% |
| !! | GAATCAAGGAATGGTGATGG+AGG | - | chr5.1:69188590-69188609 | MS.gene99386:CDS | 45.0% |
| !! | TTGATTGATGATGGCAAGCC+AGG | + | chr5.1:69187815-69187834 | None:intergenic | 45.0% |
| !!! | GGCAAACTTTTTTACTCGCG+AGG | - | chr5.1:69188611-69188630 | MS.gene99386:CDS | 45.0% |
| AGGCGTTTCCCATTGGAGAA+GGG | - | chr5.1:69187556-69187575 | MS.gene99386:CDS | 50.0% | |
| AGTCTCAAGAACAGGCAAGG+AGG | - | chr5.1:69187197-69187216 | MS.gene99386:CDS | 50.0% | |
| CGGCGAGTCAAACTTTGATG+TGG | - | chr5.1:69187951-69187970 | MS.gene99386:CDS | 50.0% | |
| CTCGCCTTGCCTTTCAAGAT+AGG | - | chr5.1:69188187-69188206 | MS.gene99386:CDS | 50.0% | |
| GAGGATTGCCCTTCTCCAAT+GGG | + | chr5.1:69187567-69187586 | None:intergenic | 50.0% | |
| GCCCATCATTCAGCAACAAC+AGG | - | chr5.1:69188521-69188540 | MS.gene99386:CDS | 50.0% | |
| GGGAGAGGTTGTCACAAACT+TGG | - | chr5.1:69188068-69188087 | MS.gene99386:CDS | 50.0% | |
| GTACCTCCACCAGAGGATAA+CGG | + | chr5.1:69187880-69187899 | None:intergenic | 50.0% | |
| TACCTCCACCAGAGGATAAC+GGG | + | chr5.1:69187879-69187898 | None:intergenic | 50.0% | |
| TCTTGCAAGGTGTGTGGAGT+TGG | + | chr5.1:69187472-69187491 | None:intergenic | 50.0% | |
| TGATGAGAAGGTTGCTGCAC+TGG | + | chr5.1:69188042-69188061 | None:intergenic | 50.0% | |
| TGGATGTGGATGAGCTTGAG+CGG | - | chr5.1:69187089-69187108 | MS.gene99386:CDS | 50.0% | |
| TTGTGGTACACTTGGGGAAG+GGG | - | chr5.1:69187000-69187019 | MS.gene99386:CDS | 50.0% | |
| ! | AACTGGGTTTGGAGTTTCGG+AGG | - | chr5.1:69188386-69188405 | MS.gene99386:CDS | 50.0% |
| ! | GAGAGTTCATGGCCTTGAAC+CGG | + | chr5.1:69188650-69188669 | None:intergenic | 50.0% |
| ! | TTATCCTCTGGTGGAGGTAC+TGG | - | chr5.1:69187880-69187899 | MS.gene99386:CDS | 50.0% |
| !! | GATAACGGGGGGCAATAATC+TGG | + | chr5.1:69187865-69187884 | None:intergenic | 50.0% |
| !! | GCTGAATGATGGGCTGAGAA+AGG | + | chr5.1:69188515-69188534 | None:intergenic | 50.0% |
| !! | TGGTGGAGGTACTGGTTCTA+TGG | - | chr5.1:69187888-69187907 | MS.gene99386:CDS | 50.0% |
| AAGCCAGGTTGCGCTTTCCT+TGG | + | chr5.1:69187800-69187819 | None:intergenic | 55.0% | |
| ACCTCCACCAGAGGATAACG+GGG | + | chr5.1:69187878-69187897 | None:intergenic | 55.0% | |
| AGAACCAGTACCTCCACCAG+AGG | + | chr5.1:69187887-69187906 | None:intergenic | 55.0% | |
| AGAAGGGCAATCCTCCACCA+TGG | - | chr5.1:69187572-69187591 | MS.gene99386:CDS | 55.0% | |
| ATGAGCTTGAGCGGAGGATG+TGG | - | chr5.1:69187098-69187117 | MS.gene99386:CDS | 55.0% | |
| ATGTGGATGAGCTTGAGCGG+AGG | - | chr5.1:69187092-69187111 | MS.gene99386:CDS | 55.0% | |
| CAGGCAAACCGAGCCAGATT+CGG | - | chr5.1:69187036-69187055 | MS.gene99386:CDS | 55.0% | |
| CCAAGATTCGCAAGCTCGTG+AGG | - | chr5.1:69187743-69187762 | MS.gene99386:CDS | 55.0% | |
| CCTCACGAGCTTGCGAATCT+TGG | + | chr5.1:69187746-69187765 | None:intergenic | 55.0% | |
| GAGAAGGGAAAACCGGTGAC+CGG | - | chr5.1:69187316-69187335 | MS.gene99386:CDS | 55.0% | |
| GCTTCGCTGTAAGCGCATTG+AGG | + | chr5.1:69188168-69188187 | None:intergenic | 55.0% | |
| GGAGGATTGCCCTTCTCCAA+TGG | + | chr5.1:69187568-69187587 | None:intergenic | 55.0% | |
| GGCAAGGCAGTCTCAAGAAC+AGG | - | chr5.1:69187189-69187208 | MS.gene99386:CDS | 55.0% | |
| GGCAGTCTCAAGAACAGGCA+AGG | - | chr5.1:69187194-69187213 | MS.gene99386:CDS | 55.0% | |
| GGTGGAGGGCCTTGATCTTT+AGG | + | chr5.1:69187640-69187659 | None:intergenic | 55.0% | |
| GGTGTGTGGAGTTGGACCTA+TGG | + | chr5.1:69187464-69187483 | None:intergenic | 55.0% | |
| TATTGCCCCCCGTTATCCTC+TGG | - | chr5.1:69187868-69187887 | MS.gene99386:CDS | 55.0% | |
| TCATCCTCGACCACCGAATC+TGG | + | chr5.1:69187052-69187071 | None:intergenic | 55.0% | |
| TCCAATGGGAAACGCCTCTG+AGG | + | chr5.1:69187553-69187572 | None:intergenic | 55.0% | |
| TTAGGGTCGCCATAACCTGC+AGG | + | chr5.1:69188264-69188283 | None:intergenic | 55.0% | |
| TTGTCAGATGCTCCGGTCAC+CGG | + | chr5.1:69187331-69187350 | None:intergenic | 55.0% | |
| ! | AATGGGAAACGCCTCTGAGG+AGG | + | chr5.1:69187550-69187569 | None:intergenic | 55.0% |
| ! | GAGGCGTTTCCCATTGGAGA+AGG | - | chr5.1:69187555-69187574 | MS.gene99386:CDS | 55.0% |
| ! | GGGTTTGGAGTTTCGGAGGA+CGG | - | chr5.1:69188390-69188409 | MS.gene99386:CDS | 55.0% |
| !! | TCCTCAGAGGCGTTTCCCAT+TGG | - | chr5.1:69187549-69187568 | MS.gene99386:CDS | 55.0% |
| !!! | GGTCACCGGTTTTCCCTTCT+CGG | + | chr5.1:69187317-69187336 | None:intergenic | 55.0% |
| !!! | GTCACCGGTTTTCCCTTCTC+GGG | + | chr5.1:69187316-69187335 | None:intergenic | 55.0% |
| AGCACTGCGATCCTCCTCAG+AGG | - | chr5.1:69187536-69187555 | MS.gene99386:CDS | 60.0% | |
| AGCTTGAGCGGAGGATGTGG+AGG | - | chr5.1:69187101-69187120 | MS.gene99386:CDS | 60.0% | |
| AGGGCAATCCTCCACCATGG+TGG | - | chr5.1:69187575-69187594 | MS.gene99386:CDS | 60.0% | |
| CAACCGGGACTGAAGACTGG+TGG | - | chr5.1:69187599-69187618 | MS.gene99386:CDS | 60.0% | |
| CACCAGTCTTCAGTCCCGGT+TGG | + | chr5.1:69187601-69187620 | None:intergenic | 60.0% | |
| CTCGACCACCGAATCTGGCT+CGG | + | chr5.1:69187047-69187066 | None:intergenic | 60.0% | |
| GAAGACTGGTGGCCCCAGAT+CGG | - | chr5.1:69187610-69187629 | MS.gene99386:CDS | 60.0% | |
| GCAAACCGAGCCAGATTCGG+TGG | - | chr5.1:69187039-69187058 | MS.gene99386:CDS | 60.0% | |
| GCTTGAGCGGAGGATGTGGA+GGG | - | chr5.1:69187102-69187121 | MS.gene99386:CDS | 60.0% | |
| ! | CAGCCAAGGAAAGCGCAACC+TGG | - | chr5.1:69187794-69187813 | MS.gene99386:CDS | 60.0% |
| ! | CCTCCACCAGAGGATAACGG+GGG | + | chr5.1:69187877-69187896 | None:intergenic | 60.0% |
| !! | CTCCACCAGAGGATAACGGG+GGG | + | chr5.1:69187876-69187895 | None:intergenic | 60.0% |
| CCCCCGTTATCCTCTGGTGG+AGG | - | chr5.1:69187874-69187893 | MS.gene99386:CDS | 65.0% | |
| CCTCCACCATGGTGGCCAAC+CGG | - | chr5.1:69187583-69187602 | MS.gene99386:CDS | 65.0% | |
| CTCCACCATGGTGGCCAACC+GGG | - | chr5.1:69187584-69187603 | MS.gene99386:CDS | 65.0% | |
| GGCCAACCGGGACTGAAGAC+TGG | - | chr5.1:69187596-69187615 | MS.gene99386:CDS | 65.0% | |
| GGGCCACCAGTCTTCAGTCC+CGG | + | chr5.1:69187605-69187624 | None:intergenic | 65.0% | |
| TGCCCCCCGTTATCCTCTGG+TGG | - | chr5.1:69187871-69187890 | MS.gene99386:CDS | 65.0% | |
| ! | TCAGTCCCGGTTGGCCACCA+TGG | + | chr5.1:69187592-69187611 | None:intergenic | 65.0% |
| !! | CGAGCCAGATTCGGTGGTCG+AGG | - | chr5.1:69187045-69187064 | MS.gene99386:CDS | 65.0% |
| ! | CCGGTTGGCCACCATGGTGG+AGG | + | chr5.1:69187586-69187605 | None:intergenic | 70.0% |
| ! | GTCCCGGTTGGCCACCATGG+TGG | + | chr5.1:69187589-69187608 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 69186953 | 69188830 | 69186953 | ID=MS.gene99386 |
| chr5.1 | mRNA | 69186953 | 69188830 | 69186953 | ID=MS.gene99386.t1;Parent=MS.gene99386 |
| chr5.1 | exon | 69186953 | 69188830 | 69186953 | ID=MS.gene99386.t1.exon1;Parent=MS.gene99386.t1 |
| chr5.1 | CDS | 69186953 | 69188830 | 69186953 | ID=cds.MS.gene99386.t1;Parent=MS.gene99386.t1 |
| Gene Sequence |
| Protein sequence |
