Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99498.t1 | XP_024626741.1 | 90.1 | 272 | 26 | 1 | 1 | 272 | 1 | 271 | 1.20E-132 | 482.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99498.t1 | Q39262 | 41.8 | 98 | 48 | 4 | 82 | 179 | 57 | 145 | 2.0e-08 | 61.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99498.t1 | A0A396H587 | 58.1 | 270 | 82 | 7 | 20 | 262 | 1 | 266 | 2.1e-67 | 265.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene99498.t1 | TF | C2H2 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99498.t1 | MTR_1g013130 | 33.333 | 174 | 89 | 7 | 26 | 179 | 27 | 193 | 9.70e-13 | 67.0 |
| MS.gene99498.t1 | MTR_3g011990 | 45.977 | 87 | 30 | 4 | 67 | 146 | 72 | 148 | 1.97e-11 | 63.5 |
| MS.gene99498.t1 | MTR_3g012010 | 49.254 | 67 | 27 | 1 | 66 | 125 | 71 | 137 | 2.31e-11 | 63.2 |
| MS.gene99498.t1 | MTR_5g077370 | 44.737 | 76 | 37 | 1 | 48 | 118 | 44 | 119 | 2.84e-11 | 62.4 |
| MS.gene99498.t1 | MTR_8g466760 | 46.667 | 75 | 27 | 3 | 77 | 148 | 86 | 150 | 3.85e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99498.t1 | AT5G10970 | 39.837 | 123 | 48 | 6 | 63 | 179 | 84 | 186 | 1.32e-11 | 63.9 |
| MS.gene99498.t1 | AT5G25160 | 41.837 | 98 | 48 | 4 | 82 | 179 | 57 | 145 | 1.72e-11 | 63.2 |
| MS.gene99498.t1 | AT1G80730 | 68.293 | 41 | 11 | 1 | 78 | 118 | 60 | 98 | 5.38e-11 | 61.6 |
Find 81 sgRNAs with CRISPR-Local
Find 89 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGACCAATGCCTTTCCTTCT+TGG | 0.138422 | 7.1:+32240338 | MS.gene99498:CDS |
| TTTGATTTCGACTCTAATTT+TGG | 0.159297 | 7.1:-32239926 | None:intergenic |
| TGAATTATGCCTTCTCTATT+AGG | 0.184623 | 7.1:-32240613 | None:intergenic |
| CCCCAAGCAACAACACAATT+TGG | 0.187401 | 7.1:+32240448 | MS.gene99498:CDS |
| TGGTGTTAGTGCCAAGTCTT+AGG | 0.224597 | 7.1:-32240006 | None:intergenic |
| TCTTGGCTCGGTTCACCTTA+TGG | 0.231125 | 7.1:+32240355 | MS.gene99498:CDS |
| CGGGTTGCAAAGGGTGTATT+TGG | 0.256836 | 7.1:-32240400 | None:intergenic |
| CCCAAATTGTGTTGTTGCTT+GGG | 0.273537 | 7.1:-32240449 | None:intergenic |
| GTTGTTGCTTGGGGTGAATT+TGG | 0.275394 | 7.1:-32240439 | None:intergenic |
| CCCAAAGTGTTTGACCTTTG+TGG | 0.286115 | 7.1:-32240517 | None:intergenic |
| GTTCACGCTTATGAGCATTT+TGG | 0.317761 | 7.1:-32240177 | None:intergenic |
| AGGTCAAACACTTTGGGTTT+GGG | 0.338136 | 7.1:+32240523 | MS.gene99498:CDS |
| CCACAAAGGTCAAACACTTT+GGG | 0.340923 | 7.1:+32240517 | MS.gene99498:CDS |
| GTGTTTGACCTTTGTGGAAT+TGG | 0.343209 | 7.1:-32240511 | None:intergenic |
| AAGGTCAAACACTTTGGGTT+TGG | 0.344659 | 7.1:+32240522 | MS.gene99498:CDS |
| CAAGGGTTTGGAAGTGGACT+TGG | 0.360530 | 7.1:-32240026 | None:intergenic |
| GTCACATATTGGACGCCAAT+TGG | 0.375665 | 7.1:-32240319 | None:intergenic |
| TCCCAAATTGTGTTGTTGCT+TGG | 0.377648 | 7.1:-32240450 | None:intergenic |
| TTCTCCACTTCTCAAGCTCT+TGG | 0.384550 | 7.1:+32240148 | MS.gene99498:CDS |
| TAGAAACCTCAAACGCAAAA+TGG | 0.385914 | 7.1:+32239895 | MS.gene99498:CDS |
| TCCACCGTTCTCCAAGGGTT+TGG | 0.389944 | 7.1:-32240038 | None:intergenic |
| CACCTTATGGTGGCTATGGA+GGG | 0.398816 | 7.1:+32240368 | MS.gene99498:CDS |
| GAAAGGCATTGGTCACATAT+TGG | 0.406502 | 7.1:-32240330 | None:intergenic |
| TAATAGAGAAGGCATAATTC+AGG | 0.407241 | 7.1:+32240615 | MS.gene99498:CDS |
| CCCAAGCAACAACACAATTT+GGG | 0.410223 | 7.1:+32240449 | MS.gene99498:CDS |
| TCCACAAAGGTCAAACACTT+TGG | 0.411221 | 7.1:+32240516 | MS.gene99498:CDS |
| TTAGGATCACGAGATAATAA+TGG | 0.420098 | 7.1:-32240595 | None:intergenic |
| ACCACTTTCTGCTCAGGTAA+AGG | 0.442903 | 7.1:-32240094 | None:intergenic |
| TCAAGCTCTATTCACTATCA+AGG | 0.445678 | 7.1:+32240262 | MS.gene99498:CDS |
| AATGCCTTTCCTTCTTGGCT+CGG | 0.453136 | 7.1:+32240343 | MS.gene99498:CDS |
| TTGGCATTTGCATCACATAC+CGG | 0.471216 | 7.1:-32240420 | None:intergenic |
| GTTCTCCAAGGGTTTGGAAG+TGG | 0.473154 | 7.1:-32240032 | None:intergenic |
| TCACATATTGGACGCCAATT+GGG | 0.475144 | 7.1:-32240318 | None:intergenic |
| TCACCTTATGGTGGCTATGG+AGG | 0.475493 | 7.1:+32240367 | MS.gene99498:CDS |
| TCCACTTCTCAAGCTCTTGG+AGG | 0.477317 | 7.1:+32240151 | MS.gene99498:CDS |
| GGTGTTAGTGCCAAGTCTTA+GGG | 0.481355 | 7.1:-32240005 | None:intergenic |
| GCTAACTTGCACAACCCAAT+TGG | 0.486494 | 7.1:+32240304 | MS.gene99498:CDS |
| AGTTGATGATGAGGAAACAT+AGG | 0.490666 | 7.1:-32240644 | None:intergenic |
| TAAAAGGAGAGAGGAAGAGA+TGG | 0.501837 | 7.1:+32240222 | MS.gene99498:CDS |
| GGTTCACCTTATGGTGGCTA+TGG | 0.502207 | 7.1:+32240364 | MS.gene99498:CDS |
| AACTCTACCACTTTCTGCTC+AGG | 0.502340 | 7.1:-32240100 | None:intergenic |
| CCAAATTGTGTTGTTGCTTG+GGG | 0.502858 | 7.1:-32240448 | None:intergenic |
| CAAGTCCACTTCCAAACCCT+TGG | 0.519689 | 7.1:+32240027 | MS.gene99498:CDS |
| TGATCAATGAAATTTCTTCG+AGG | 0.520979 | 7.1:-32240553 | None:intergenic |
| ATCACATACCGGGTTGCAAA+GGG | 0.522044 | 7.1:-32240409 | None:intergenic |
| ACCCCTCCATAGCCACCATA+AGG | 0.522093 | 7.1:-32240370 | None:intergenic |
| TGGCATTTGCATCACATACC+GGG | 0.531856 | 7.1:-32240419 | None:intergenic |
| TCTATCCTCATCATTTCCAA+TGG | 0.532227 | 7.1:-32239876 | None:intergenic |
| ACCTTATGGTGGCTATGGAG+GGG | 0.537456 | 7.1:+32240369 | MS.gene99498:CDS |
| ATTAGAGTCGAAATCAAAGA+AGG | 0.542585 | 7.1:+32239931 | MS.gene99498:CDS |
| CAAATACACCCTTTGCAACC+CGG | 0.543155 | 7.1:+32240401 | MS.gene99498:CDS |
| GTTGATGATGAGGAAACATA+GGG | 0.545764 | 7.1:-32240643 | None:intergenic |
| GAATAGAGCTTGAAAACCAT+AGG | 0.547197 | 7.1:-32240252 | None:intergenic |
| TCAACATCAGATTCAGAGGT+TGG | 0.549087 | 7.1:-32239971 | None:intergenic |
| TAGCACTACGGAAATATGAA+TGG | 0.550571 | 7.1:-32240285 | None:intergenic |
| AACCTCTGAATCTGATGTTG+AGG | 0.555993 | 7.1:+32239973 | MS.gene99498:CDS |
| ACCTCCAAGAGCTTGAGAAG+TGG | 0.556669 | 7.1:-32240152 | None:intergenic |
| AATGGAAGATAAAAGGAGAG+AGG | 0.557828 | 7.1:+32240213 | MS.gene99498:CDS |
| TGAATGTCCACCGTTCTCCA+AGG | 0.561681 | 7.1:-32240044 | None:intergenic |
| CATCACATACCGGGTTGCAA+AGG | 0.564146 | 7.1:-32240410 | None:intergenic |
| AAGAGATGGATTCAACCCTA+TGG | 0.564603 | 7.1:+32240236 | MS.gene99498:CDS |
| GAATGTCCACCGTTCTCCAA+GGG | 0.565536 | 7.1:-32240043 | None:intergenic |
| ACCTTTACCTGAGCAGAAAG+TGG | 0.574184 | 7.1:+32240093 | MS.gene99498:CDS |
| TAAGGTGAACCGAGCCAAGA+AGG | 0.575815 | 7.1:-32240352 | None:intergenic |
| ATTTCCAATGGAAAGTCTCT+CGG | 0.582528 | 7.1:-32239864 | None:intergenic |
| TGAACCGAGCCAAGAAGGAA+AGG | 0.582959 | 7.1:-32240347 | None:intergenic |
| GAGCCAAGAAGGAAAGGCAT+TGG | 0.584408 | 7.1:-32240341 | None:intergenic |
| ATGTCCGAGAGACTTTCCAT+TGG | 0.589059 | 7.1:+32239860 | MS.gene99498:CDS |
| AATAGAGCTTGAAAACCATA+GGG | 0.593787 | 7.1:-32240251 | None:intergenic |
| ATCCTCAACATCAGATTCAG+AGG | 0.595365 | 7.1:-32239975 | None:intergenic |
| TCTCGTGATCCTAATAGAGA+AGG | 0.597683 | 7.1:+32240604 | MS.gene99498:CDS |
| ACTTTCCATTGGAAATGATG+AGG | 0.597982 | 7.1:+32239871 | MS.gene99498:CDS |
| CCTCAAACGCAAAATGGTGG+AGG | 0.605406 | 7.1:+32239901 | MS.gene99498:CDS |
| GATTTACTAACCCTAAGACT+TGG | 0.606458 | 7.1:+32239995 | MS.gene99498:CDS |
| ACTTCCAAACCCTTGGAGAA+CGG | 0.610472 | 7.1:+32240034 | MS.gene99498:CDS |
| TGGCTCGGTTCACCTTATGG+TGG | 0.610898 | 7.1:+32240358 | MS.gene99498:CDS |
| AAACCTCAAACGCAAAATGG+TGG | 0.616518 | 7.1:+32239898 | MS.gene99498:CDS |
| GGTTGTGCAAGTTAGCACTA+CGG | 0.648362 | 7.1:-32240297 | None:intergenic |
| CGTTGATTGAGTTGATGATG+AGG | 0.655857 | 7.1:-32240653 | None:intergenic |
| TCCAAACCCTTGGAGAACGG+TGG | 0.656704 | 7.1:+32240037 | MS.gene99498:CDS |
| CTGCATTTCCAATTCCACAA+AGG | 0.667747 | 7.1:+32240503 | MS.gene99498:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAAAAATGGAAGATAAA+AGG | + | chr7.1:32240206-32240225 | MS.gene99498:CDS | 15.0% |
| ! | TGAACGTGTCTTAAAAAAAA+TGG | + | chr7.1:32240195-32240214 | MS.gene99498:CDS | 25.0% |
| !!! | AATTTGGGATGACTAATTTT+TGG | + | chr7.1:32240464-32240483 | MS.gene99498:CDS | 25.0% |
| !!! | ATTTGGGATGACTAATTTTT+GGG | + | chr7.1:32240465-32240484 | MS.gene99498:CDS | 25.0% |
| !!! | TTTGATTTCGACTCTAATTT+TGG | - | chr7.1:32239929-32239948 | None:intergenic | 25.0% |
| AATAGAGCTTGAAAACCATA+GGG | - | chr7.1:32240254-32240273 | None:intergenic | 30.0% | |
| ATTAGAGTCGAAATCAAAGA+AGG | + | chr7.1:32239931-32239950 | MS.gene99498:CDS | 30.0% | |
| TGAATTATGCCTTCTCTATT+AGG | - | chr7.1:32240616-32240635 | None:intergenic | 30.0% | |
| TGATCAATGAAATTTCTTCG+AGG | - | chr7.1:32240556-32240575 | None:intergenic | 30.0% | |
| TTAGGATCACGAGATAATAA+TGG | - | chr7.1:32240598-32240617 | None:intergenic | 30.0% | |
| ! | TAATAGAGAAGGCATAATTC+AGG | + | chr7.1:32240615-32240634 | MS.gene99498:CDS | 30.0% |
| !! | TTTGGGATGACTAATTTTTG+GGG | + | chr7.1:32240466-32240485 | MS.gene99498:CDS | 30.0% |
| AATGGAAGATAAAAGGAGAG+AGG | + | chr7.1:32240213-32240232 | MS.gene99498:CDS | 35.0% | |
| ACTTTCCATTGGAAATGATG+AGG | + | chr7.1:32239871-32239890 | MS.gene99498:CDS | 35.0% | |
| ATTTCCAATGGAAAGTCTCT+CGG | - | chr7.1:32239867-32239886 | None:intergenic | 35.0% | |
| GAATAGAGCTTGAAAACCAT+AGG | - | chr7.1:32240255-32240274 | None:intergenic | 35.0% | |
| GATTTACTAACCCTAAGACT+TGG | + | chr7.1:32239995-32240014 | MS.gene99498:CDS | 35.0% | |
| TAGAAACCTCAAACGCAAAA+TGG | + | chr7.1:32239895-32239914 | MS.gene99498:CDS | 35.0% | |
| TAGCACTACGGAAATATGAA+TGG | - | chr7.1:32240288-32240307 | None:intergenic | 35.0% | |
| TCAAGCTCTATTCACTATCA+AGG | + | chr7.1:32240262-32240281 | MS.gene99498:CDS | 35.0% | |
| TCTATCCTCATCATTTCCAA+TGG | - | chr7.1:32239879-32239898 | None:intergenic | 35.0% | |
| !! | AGTTGATGATGAGGAAACAT+AGG | - | chr7.1:32240647-32240666 | None:intergenic | 35.0% |
| !! | GTTGATGATGAGGAAACATA+GGG | - | chr7.1:32240646-32240665 | None:intergenic | 35.0% |
| AAACCTCAAACGCAAAATGG+TGG | + | chr7.1:32239898-32239917 | MS.gene99498:CDS | 40.0% | |
| AACCTCTGAATCTGATGTTG+AGG | + | chr7.1:32239973-32239992 | MS.gene99498:CDS | 40.0% | |
| ATCCTCAACATCAGATTCAG+AGG | - | chr7.1:32239978-32239997 | None:intergenic | 40.0% | |
| CCACAAAGGTCAAACACTTT+GGG | + | chr7.1:32240517-32240536 | MS.gene99498:CDS | 40.0% | |
| CCCAAGCAACAACACAATTT+GGG | + | chr7.1:32240449-32240468 | MS.gene99498:CDS | 40.0% | |
| CTGCATTTCCAATTCCACAA+AGG | + | chr7.1:32240503-32240522 | MS.gene99498:CDS | 40.0% | |
| GTGTTTGACCTTTGTGGAAT+TGG | - | chr7.1:32240514-32240533 | None:intergenic | 40.0% | |
| TAAAAGGAGAGAGGAAGAGA+TGG | + | chr7.1:32240222-32240241 | MS.gene99498:CDS | 40.0% | |
| TCAACATCAGATTCAGAGGT+TGG | - | chr7.1:32239974-32239993 | None:intergenic | 40.0% | |
| TCACATATTGGACGCCAATT+GGG | - | chr7.1:32240321-32240340 | None:intergenic | 40.0% | |
| TCCACAAAGGTCAAACACTT+TGG | + | chr7.1:32240516-32240535 | MS.gene99498:CDS | 40.0% | |
| TCTCGTGATCCTAATAGAGA+AGG | + | chr7.1:32240604-32240623 | MS.gene99498:CDS | 40.0% | |
| TTGGCATTTGCATCACATAC+CGG | - | chr7.1:32240423-32240442 | None:intergenic | 40.0% | |
| ! | AAGAGATGGATTCAACCCTA+TGG | + | chr7.1:32240236-32240255 | MS.gene99498:CDS | 40.0% |
| ! | AAGGTCAAACACTTTGGGTT+TGG | + | chr7.1:32240522-32240541 | MS.gene99498:CDS | 40.0% |
| ! | AGGTCAAACACTTTGGGTTT+GGG | + | chr7.1:32240523-32240542 | MS.gene99498:CDS | 40.0% |
| ! | CCAAATTGTGTTGTTGCTTG+GGG | - | chr7.1:32240451-32240470 | None:intergenic | 40.0% |
| ! | CCCAAATTGTGTTGTTGCTT+GGG | - | chr7.1:32240452-32240471 | None:intergenic | 40.0% |
| ! | GTTCACGCTTATGAGCATTT+TGG | - | chr7.1:32240180-32240199 | None:intergenic | 40.0% |
| ! | TCCCAAATTGTGTTGTTGCT+TGG | - | chr7.1:32240453-32240472 | None:intergenic | 40.0% |
| !! | CGTTGATTGAGTTGATGATG+AGG | - | chr7.1:32240656-32240675 | None:intergenic | 40.0% |
| !! | GAAAGGCATTGGTCACATAT+TGG | - | chr7.1:32240333-32240352 | None:intergenic | 40.0% |
| !!! | ATGACTAATTTTTGGGGTGG+AGG | + | chr7.1:32240472-32240491 | MS.gene99498:CDS | 40.0% |
| AACTCTACCACTTTCTGCTC+AGG | - | chr7.1:32240103-32240122 | None:intergenic | 45.0% | |
| AATGCCTTTCCTTCTTGGCT+CGG | + | chr7.1:32240343-32240362 | MS.gene99498:CDS | 45.0% | |
| ACCACTTTCTGCTCAGGTAA+AGG | - | chr7.1:32240097-32240116 | None:intergenic | 45.0% | |
| ACCTTTACCTGAGCAGAAAG+TGG | + | chr7.1:32240093-32240112 | MS.gene99498:CDS | 45.0% | |
| ACTTCCAAACCCTTGGAGAA+CGG | + | chr7.1:32240034-32240053 | MS.gene99498:CDS | 45.0% | |
| ATCACATACCGGGTTGCAAA+GGG | - | chr7.1:32240412-32240431 | None:intergenic | 45.0% | |
| ATGTCCGAGAGACTTTCCAT+TGG | + | chr7.1:32239860-32239879 | MS.gene99498:CDS | 45.0% | |
| CAAATACACCCTTTGCAACC+CGG | + | chr7.1:32240401-32240420 | MS.gene99498:CDS | 45.0% | |
| CCCCAAGCAACAACACAATT+TGG | + | chr7.1:32240448-32240467 | MS.gene99498:CDS | 45.0% | |
| GGTGTTAGTGCCAAGTCTTA+GGG | - | chr7.1:32240008-32240027 | None:intergenic | 45.0% | |
| GGTTGTGCAAGTTAGCACTA+CGG | - | chr7.1:32240300-32240319 | None:intergenic | 45.0% | |
| GTCACATATTGGACGCCAAT+TGG | - | chr7.1:32240322-32240341 | None:intergenic | 45.0% | |
| TGACCAATGCCTTTCCTTCT+TGG | + | chr7.1:32240338-32240357 | MS.gene99498:CDS | 45.0% | |
| TGGCATTTGCATCACATACC+GGG | - | chr7.1:32240422-32240441 | None:intergenic | 45.0% | |
| TTCTCCACTTCTCAAGCTCT+TGG | + | chr7.1:32240148-32240167 | MS.gene99498:CDS | 45.0% | |
| ! | CCCAAAGTGTTTGACCTTTG+TGG | - | chr7.1:32240520-32240539 | None:intergenic | 45.0% |
| ! | GCTAACTTGCACAACCCAAT+TGG | + | chr7.1:32240304-32240323 | MS.gene99498:CDS | 45.0% |
| ! | GTTGTTGCTTGGGGTGAATT+TGG | - | chr7.1:32240442-32240461 | None:intergenic | 45.0% |
| ! | TGGTGTTAGTGCCAAGTCTT+AGG | - | chr7.1:32240009-32240028 | None:intergenic | 45.0% |
| !! | GGGATGACTAATTTTTGGGG+TGG | + | chr7.1:32240469-32240488 | MS.gene99498:CDS | 45.0% |
| ACCTCCAAGAGCTTGAGAAG+TGG | - | chr7.1:32240155-32240174 | None:intergenic | 50.0% | |
| ACCTTATGGTGGCTATGGAG+GGG | + | chr7.1:32240369-32240388 | MS.gene99498:CDS | 50.0% | |
| CAAGTCCACTTCCAAACCCT+TGG | + | chr7.1:32240027-32240046 | MS.gene99498:CDS | 50.0% | |
| CACCTTATGGTGGCTATGGA+GGG | + | chr7.1:32240368-32240387 | MS.gene99498:CDS | 50.0% | |
| CATCACATACCGGGTTGCAA+AGG | - | chr7.1:32240413-32240432 | None:intergenic | 50.0% | |
| CCTCAAACGCAAAATGGTGG+AGG | + | chr7.1:32239901-32239920 | MS.gene99498:CDS | 50.0% | |
| GAATGTCCACCGTTCTCCAA+GGG | - | chr7.1:32240046-32240065 | None:intergenic | 50.0% | |
| GGTTCACCTTATGGTGGCTA+TGG | + | chr7.1:32240364-32240383 | MS.gene99498:CDS | 50.0% | |
| GTTCTCCAAGGGTTTGGAAG+TGG | - | chr7.1:32240035-32240054 | None:intergenic | 50.0% | |
| TAAGGTGAACCGAGCCAAGA+AGG | - | chr7.1:32240355-32240374 | None:intergenic | 50.0% | |
| TCACCTTATGGTGGCTATGG+AGG | + | chr7.1:32240367-32240386 | MS.gene99498:CDS | 50.0% | |
| TCCACTTCTCAAGCTCTTGG+AGG | + | chr7.1:32240151-32240170 | MS.gene99498:CDS | 50.0% | |
| TGAACCGAGCCAAGAAGGAA+AGG | - | chr7.1:32240350-32240369 | None:intergenic | 50.0% | |
| TGAATGTCCACCGTTCTCCA+AGG | - | chr7.1:32240047-32240066 | None:intergenic | 50.0% | |
| ! | CAAGGGTTTGGAAGTGGACT+TGG | - | chr7.1:32240029-32240048 | None:intergenic | 50.0% |
| ! | CCTCCACCATTTTGCGTTTG+AGG | - | chr7.1:32239904-32239923 | None:intergenic | 50.0% |
| ! | CGGGTTGCAAAGGGTGTATT+TGG | - | chr7.1:32240403-32240422 | None:intergenic | 50.0% |
| ! | GAGCCAAGAAGGAAAGGCAT+TGG | - | chr7.1:32240344-32240363 | None:intergenic | 50.0% |
| !! | TCTTGGCTCGGTTCACCTTA+TGG | + | chr7.1:32240355-32240374 | MS.gene99498:CDS | 50.0% |
| ACCCCTCCATAGCCACCATA+AGG | - | chr7.1:32240373-32240392 | None:intergenic | 55.0% | |
| TCCAAACCCTTGGAGAACGG+TGG | + | chr7.1:32240037-32240056 | MS.gene99498:CDS | 55.0% | |
| TCCACCGTTCTCCAAGGGTT+TGG | - | chr7.1:32240041-32240060 | None:intergenic | 55.0% | |
| !! | TGGCTCGGTTCACCTTATGG+TGG | + | chr7.1:32240358-32240377 | MS.gene99498:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 32239860 | 32240678 | 32239860 | ID=MS.gene99498 |
| chr7.1 | mRNA | 32239860 | 32240678 | 32239860 | ID=MS.gene99498.t1;Parent=MS.gene99498 |
| chr7.1 | exon | 32239860 | 32240678 | 32239860 | ID=MS.gene99498.t1.exon1;Parent=MS.gene99498.t1 |
| chr7.1 | CDS | 32239860 | 32240678 | 32239860 | ID=cds.MS.gene99498.t1;Parent=MS.gene99498.t1 |
| Gene Sequence |
| Protein sequence |
