Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99499.t1 | XP_024626741.1 | 86.6 | 283 | 26 | 2 | 1 | 283 | 1 | 271 | 1.50E-130 | 475.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99499.t1 | Q39266 | 46.2 | 78 | 34 | 2 | 88 | 165 | 59 | 128 | 2.7e-08 | 60.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99499.t1 | A0A2K3MNW6 | 58.1 | 284 | 98 | 7 | 1 | 272 | 1 | 275 | 5.1e-72 | 280.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene99499.t1 | TF | C2H2 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99499.t1 | MTR_2g067740 | 47.692 | 65 | 31 | 2 | 87 | 148 | 60 | 124 | 2.16e-11 | 62.4 |
| MS.gene99499.t1 | MTR_3g011970 | 51.613 | 62 | 24 | 2 | 86 | 147 | 98 | 153 | 6.26e-11 | 62.4 |
| MS.gene99499.t1 | MTR_5g008280 | 34.921 | 126 | 67 | 4 | 88 | 206 | 48 | 165 | 9.16e-11 | 62.0 |
| MS.gene99499.t1 | MTR_4g128340 | 45.946 | 74 | 32 | 3 | 82 | 154 | 43 | 109 | 9.28e-11 | 59.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99499.t1 | AT5G57520 | 51.389 | 72 | 22 | 3 | 88 | 156 | 52 | 113 | 2.79e-12 | 63.5 |
| MS.gene99499.t1 | AT1G24625 | 46.154 | 78 | 34 | 2 | 88 | 165 | 59 | 128 | 6.02e-12 | 63.9 |
| MS.gene99499.t1 | AT5G10970 | 42.268 | 97 | 38 | 5 | 82 | 170 | 100 | 186 | 4.97e-11 | 62.4 |
| MS.gene99499.t1 | AT5G25160 | 40.367 | 109 | 45 | 7 | 82 | 190 | 57 | 145 | 7.66e-11 | 61.2 |
Find 84 sgRNAs with CRISPR-Local
Find 95 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGACCAATGCCTTTCCTTCT+TGG | 0.138422 | 7.1:+32236299 | MS.gene99499:CDS |
| TTTGATTTCGACTCTAATTT+TGG | 0.159297 | 7.1:-32235854 | None:intergenic |
| TGAATTATGCCTTCTCTATT+AGG | 0.177692 | 7.1:-32236574 | None:intergenic |
| CCCCAAGCAACAACACAATT+TGG | 0.187401 | 7.1:+32236409 | MS.gene99499:CDS |
| TGGTGTGAGTGCCAAGTCTT+AGG | 0.263142 | 7.1:-32235934 | None:intergenic |
| CCCAAATTGTGTTGTTGCTT+GGG | 0.273537 | 7.1:-32236410 | None:intergenic |
| GTTGTTGCTTGGGGTGAATT+TGG | 0.275394 | 7.1:-32236400 | None:intergenic |
| CCCAAAGTGTTTGACCTTTG+TGG | 0.277762 | 7.1:-32236478 | None:intergenic |
| AGGTCAAACACTTTGGGTTT+TGG | 0.290151 | 7.1:+32236484 | MS.gene99499:CDS |
| CAGGTTGCAAGGGGTGTATT+TGG | 0.297330 | 7.1:-32236361 | None:intergenic |
| GTTCACGCTTATGAGCATTT+TGG | 0.317761 | 7.1:-32236105 | None:intergenic |
| TCCACCATTCCCCAAGGGTT+TGG | 0.335105 | 7.1:-32235966 | None:intergenic |
| CCACAAAGGTCAAACACTTT+GGG | 0.340923 | 7.1:+32236478 | MS.gene99499:CDS |
| TCTTGGCTCGGTTCACCATA+TGG | 0.352251 | 7.1:+32236316 | MS.gene99499:CDS |
| CAAGGGTTTGGAAGTGGACT+TGG | 0.363013 | 7.1:-32235954 | None:intergenic |
| GTGTTTGACCTTTGTGGAAT+TGG | 0.364677 | 7.1:-32236472 | None:intergenic |
| GTCACATATTGGACGCCAAT+TGG | 0.375665 | 7.1:-32236280 | None:intergenic |
| TCCCAAATTGTGTTGTTGCT+TGG | 0.377648 | 7.1:-32236411 | None:intergenic |
| TAGTGAATAGAGCTTGAAAA+TGG | 0.380905 | 7.1:-32236217 | None:intergenic |
| TTCTCCACTTCTCAAGCTCT+TGG | 0.384550 | 7.1:+32236076 | MS.gene99499:CDS |
| TAGAAACCTCAAACGCAAAA+TGG | 0.385914 | 7.1:+32235823 | MS.gene99499:CDS |
| GAAAGGCATTGGTCACATAT+TGG | 0.406502 | 7.1:-32236291 | None:intergenic |
| TAATAGAGAAGGCATAATTC+AGG | 0.407241 | 7.1:+32236576 | MS.gene99499:CDS |
| CCCAAGCAACAACACAATTT+GGG | 0.410223 | 7.1:+32236410 | MS.gene99499:CDS |
| TCCACAAAGGTCAAACACTT+TGG | 0.411221 | 7.1:+32236477 | MS.gene99499:CDS |
| CACCATATGGTGGCTATGGA+GGG | 0.414143 | 7.1:+32236329 | MS.gene99499:CDS |
| TTAGGATCACGAGATAATAA+TGG | 0.420098 | 7.1:-32236556 | None:intergenic |
| ATAGAGCTTGAAAATGGATA+AGG | 0.424890 | 7.1:-32236211 | None:intergenic |
| TCAACATCAGATTCAGAGAT+TGG | 0.439332 | 7.1:-32235899 | None:intergenic |
| TCAAGCTCTATTCACTATCA+AGG | 0.445268 | 7.1:+32236223 | MS.gene99499:CDS |
| AATGCCTTTCCTTCTTGGCT+CGG | 0.453136 | 7.1:+32236304 | MS.gene99499:CDS |
| TGATCAATGAAATTTCTTTG+AGG | 0.466939 | 7.1:-32236514 | None:intergenic |
| ATTCCCCAAGGGTTTGGAAG+TGG | 0.467621 | 7.1:-32235960 | None:intergenic |
| CAAGTCCACTTCCAAACCCT+TGG | 0.472875 | 7.1:+32235955 | MS.gene99499:CDS |
| AAGTCCACTTCCAAACCCTT+GGG | 0.473221 | 7.1:+32235956 | MS.gene99499:CDS |
| TCACATATTGGACGCCAATT+GGG | 0.475144 | 7.1:-32236279 | None:intergenic |
| TCCACTTCTCAAGCTCTTGG+AGG | 0.477317 | 7.1:+32236079 | MS.gene99499:CDS |
| TCACCATATGGTGGCTATGG+AGG | 0.477975 | 7.1:+32236328 | MS.gene99499:CDS |
| TAGAGCTTGAAAATGGATAA+GGG | 0.481590 | 7.1:-32236210 | None:intergenic |
| GCTAACTTGCACAACCCAAT+TGG | 0.486494 | 7.1:+32236265 | MS.gene99499:CDS |
| ACCCCTCCATAGCCACCATA+TGG | 0.490038 | 7.1:-32236331 | None:intergenic |
| CTTGAAAATGGATAAGGGTA+TGG | 0.493945 | 7.1:-32236205 | None:intergenic |
| GGTTCACCATATGGTGGCTA+TGG | 0.499351 | 7.1:+32236325 | MS.gene99499:CDS |
| TAAAAGGAGAGAGGAAGAGA+TGG | 0.501837 | 7.1:+32236150 | MS.gene99499:CDS |
| CCAAATTGTGTTGTTGCTTG+GGG | 0.502858 | 7.1:-32236409 | None:intergenic |
| CAAATACACCCCTTGCAACC+TGG | 0.503232 | 7.1:+32236362 | MS.gene99499:CDS |
| TTCTTGTCACAATAATTACA+AGG | 0.503282 | 7.1:-32236052 | None:intergenic |
| TGGCATTTGCATCACATACC+AGG | 0.518397 | 7.1:-32236380 | None:intergenic |
| ATTATTAGATCTAAACCATA+GGG | 0.518656 | 7.1:-32236179 | None:intergenic |
| GGTGTGAGTGCCAAGTCTTA+GGG | 0.522108 | 7.1:-32235933 | None:intergenic |
| ACTTCCAAACCCTTGGGGAA+TGG | 0.528452 | 7.1:+32235962 | MS.gene99499:CDS |
| GATTATTAGATCTAAACCAT+AGG | 0.529631 | 7.1:-32236180 | None:intergenic |
| GTTGATGATGAGGACACATT+GGG | 0.531489 | 7.1:-32236604 | None:intergenic |
| TCTATCCTCATCATTTCCAA+TGG | 0.532227 | 7.1:-32235804 | None:intergenic |
| ATTTCCAATGGAAATTCTCT+CGG | 0.535410 | 7.1:-32235792 | None:intergenic |
| GCATCACATACCAGGTTGCA+AGG | 0.542521 | 7.1:-32236372 | None:intergenic |
| ATTAGAGTCGAAATCAAAGA+AGG | 0.542585 | 7.1:+32235859 | MS.gene99499:CDS |
| TAGCACTACGGAAATATGAA+TGG | 0.550571 | 7.1:-32236246 | None:intergenic |
| ACCATATGGTGGCTATGGAG+GGG | 0.551080 | 7.1:+32236330 | MS.gene99499:CDS |
| TCCAAACCCTTGGGGAATGG+TGG | 0.553032 | 7.1:+32235965 | MS.gene99499:CDS |
| ACCTCCAAGAGCTTGAGAAG+TGG | 0.556669 | 7.1:-32236080 | None:intergenic |
| AATGGAAGATAAAAGGAGAG+AGG | 0.557828 | 7.1:+32236141 | MS.gene99499:CDS |
| AAGAGATGGATTCAACCCTA+TGG | 0.564603 | 7.1:+32236164 | MS.gene99499:CDS |
| AATCTCTGAATCTGATGTTG+AGG | 0.574079 | 7.1:+32235901 | MS.gene99499:CDS |
| TATGGTGAACCGAGCCAAGA+AGG | 0.575815 | 7.1:-32236313 | None:intergenic |
| GAGCCAAGAAGGAAAGGCAT+TGG | 0.584408 | 7.1:-32236302 | None:intergenic |
| ATGTCCGAGAGAATTTCCAT+TGG | 0.586763 | 7.1:+32235788 | MS.gene99499:CDS |
| CATCACATACCAGGTTGCAA+GGG | 0.588137 | 7.1:-32236371 | None:intergenic |
| AGTTGATGATGAGGACACAT+TGG | 0.595890 | 7.1:-32236605 | None:intergenic |
| TCTCGTGATCCTAATAGAGA+AGG | 0.597683 | 7.1:+32236565 | MS.gene99499:CDS |
| TGAATGTCCACCATTCCCCA+AGG | 0.598273 | 7.1:-32235972 | None:intergenic |
| TGAACCGAGCCAAGAAGGAA+AGG | 0.598971 | 7.1:-32236308 | None:intergenic |
| AATTTCCATTGGAAATGATG+AGG | 0.604935 | 7.1:+32235799 | MS.gene99499:CDS |
| CCTCAAACGCAAAATGGTGG+AGG | 0.605406 | 7.1:+32235829 | MS.gene99499:CDS |
| TCTTGTCACAATAATTACAA+GGG | 0.607585 | 7.1:-32236051 | None:intergenic |
| AAACCTCAAACGCAAAATGG+TGG | 0.616518 | 7.1:+32235826 | MS.gene99499:CDS |
| GAATGTCCACCATTCCCCAA+GGG | 0.619462 | 7.1:-32235971 | None:intergenic |
| GATTTACTGACCCTAAGACT+TGG | 0.622734 | 7.1:+32235923 | MS.gene99499:CDS |
| TGGCTCGGTTCACCATATGG+TGG | 0.639915 | 7.1:+32236319 | MS.gene99499:CDS |
| GGTTGTGCAAGTTAGCACTA+CGG | 0.648362 | 7.1:-32236258 | None:intergenic |
| ATCACATACCAGGTTGCAAG+GGG | 0.662631 | 7.1:-32236370 | None:intergenic |
| GGTTGATTGAGTTGATGATG+AGG | 0.677458 | 7.1:-32236614 | None:intergenic |
| CTGCATTGCCAATTCCACAA+AGG | 0.690145 | 7.1:+32236464 | MS.gene99499:CDS |
| AGTCCACTTCCAAACCCTTG+GGG | 0.716852 | 7.1:+32235957 | MS.gene99499:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAAAAATGGAAGATAAA+AGG | + | chr7.1:32236134-32236153 | MS.gene99499:CDS | 15.0% |
| !! | ATTATTAGATCTAAACCATA+GGG | - | chr7.1:32236182-32236201 | None:intergenic | 20.0% |
| ! | GATTATTAGATCTAAACCAT+AGG | - | chr7.1:32236183-32236202 | None:intergenic | 25.0% |
| ! | TCTTGTCACAATAATTACAA+GGG | - | chr7.1:32236054-32236073 | None:intergenic | 25.0% |
| ! | TGAACGTGTCTTAAAAAAAA+TGG | + | chr7.1:32236123-32236142 | MS.gene99499:CDS | 25.0% |
| ! | TGATCAATGAAATTTCTTTG+AGG | - | chr7.1:32236517-32236536 | None:intergenic | 25.0% |
| ! | TTCTTGTCACAATAATTACA+AGG | - | chr7.1:32236055-32236074 | None:intergenic | 25.0% |
| !!! | AATTTGGGATGACTAATTTT+TGG | + | chr7.1:32236425-32236444 | MS.gene99499:CDS | 25.0% |
| !!! | ATTTGGGATGACTAATTTTT+GGG | + | chr7.1:32236426-32236445 | MS.gene99499:CDS | 25.0% |
| !!! | TTTGATTTCGACTCTAATTT+TGG | - | chr7.1:32235857-32235876 | None:intergenic | 25.0% |
| AATTTCCATTGGAAATGATG+AGG | + | chr7.1:32235799-32235818 | MS.gene99499:CDS | 30.0% | |
| ATAGAGCTTGAAAATGGATA+AGG | - | chr7.1:32236214-32236233 | None:intergenic | 30.0% | |
| ATTAGAGTCGAAATCAAAGA+AGG | + | chr7.1:32235859-32235878 | MS.gene99499:CDS | 30.0% | |
| ATTTCCAATGGAAATTCTCT+CGG | - | chr7.1:32235795-32235814 | None:intergenic | 30.0% | |
| TAGAGCTTGAAAATGGATAA+GGG | - | chr7.1:32236213-32236232 | None:intergenic | 30.0% | |
| TAGTGAATAGAGCTTGAAAA+TGG | - | chr7.1:32236220-32236239 | None:intergenic | 30.0% | |
| TGAATTATGCCTTCTCTATT+AGG | - | chr7.1:32236577-32236596 | None:intergenic | 30.0% | |
| TTAGGATCACGAGATAATAA+TGG | - | chr7.1:32236559-32236578 | None:intergenic | 30.0% | |
| ! | TAATAGAGAAGGCATAATTC+AGG | + | chr7.1:32236576-32236595 | MS.gene99499:CDS | 30.0% |
| !! | TTTGGGATGACTAATTTTTG+GGG | + | chr7.1:32236427-32236446 | MS.gene99499:CDS | 30.0% |
| AATCTCTGAATCTGATGTTG+AGG | + | chr7.1:32235901-32235920 | MS.gene99499:CDS | 35.0% | |
| AATGGAAGATAAAAGGAGAG+AGG | + | chr7.1:32236141-32236160 | MS.gene99499:CDS | 35.0% | |
| CTTGAAAATGGATAAGGGTA+TGG | - | chr7.1:32236208-32236227 | None:intergenic | 35.0% | |
| TAGAAACCTCAAACGCAAAA+TGG | + | chr7.1:32235823-32235842 | MS.gene99499:CDS | 35.0% | |
| TAGCACTACGGAAATATGAA+TGG | - | chr7.1:32236249-32236268 | None:intergenic | 35.0% | |
| TCAACATCAGATTCAGAGAT+TGG | - | chr7.1:32235902-32235921 | None:intergenic | 35.0% | |
| TCAAGCTCTATTCACTATCA+AGG | + | chr7.1:32236223-32236242 | MS.gene99499:CDS | 35.0% | |
| TCTATCCTCATCATTTCCAA+TGG | - | chr7.1:32235807-32235826 | None:intergenic | 35.0% | |
| AAACCTCAAACGCAAAATGG+TGG | + | chr7.1:32235826-32235845 | MS.gene99499:CDS | 40.0% | |
| ACCTTTACCTGAGCAAAAAG+TGG | + | chr7.1:32236021-32236040 | MS.gene99499:CDS | 40.0% | |
| ATGTCCGAGAGAATTTCCAT+TGG | + | chr7.1:32235788-32235807 | MS.gene99499:CDS | 40.0% | |
| CCACAAAGGTCAAACACTTT+GGG | + | chr7.1:32236478-32236497 | MS.gene99499:CDS | 40.0% | |
| CCCAAGCAACAACACAATTT+GGG | + | chr7.1:32236410-32236429 | MS.gene99499:CDS | 40.0% | |
| GATTTACTGACCCTAAGACT+TGG | + | chr7.1:32235923-32235942 | MS.gene99499:CDS | 40.0% | |
| GTGTTTGACCTTTGTGGAAT+TGG | - | chr7.1:32236475-32236494 | None:intergenic | 40.0% | |
| TAAAAGGAGAGAGGAAGAGA+TGG | + | chr7.1:32236150-32236169 | MS.gene99499:CDS | 40.0% | |
| TCACATATTGGACGCCAATT+GGG | - | chr7.1:32236282-32236301 | None:intergenic | 40.0% | |
| TCCACAAAGGTCAAACACTT+TGG | + | chr7.1:32236477-32236496 | MS.gene99499:CDS | 40.0% | |
| TCTCGTGATCCTAATAGAGA+AGG | + | chr7.1:32236565-32236584 | MS.gene99499:CDS | 40.0% | |
| ! | AAGAGATGGATTCAACCCTA+TGG | + | chr7.1:32236164-32236183 | MS.gene99499:CDS | 40.0% |
| ! | CCAAATTGTGTTGTTGCTTG+GGG | - | chr7.1:32236412-32236431 | None:intergenic | 40.0% |
| ! | CCCAAATTGTGTTGTTGCTT+GGG | - | chr7.1:32236413-32236432 | None:intergenic | 40.0% |
| ! | GTTCACGCTTATGAGCATTT+TGG | - | chr7.1:32236108-32236127 | None:intergenic | 40.0% |
| ! | TCCCAAATTGTGTTGTTGCT+TGG | - | chr7.1:32236414-32236433 | None:intergenic | 40.0% |
| !! | AGGTCAAACACTTTGGGTTT+TGG | + | chr7.1:32236484-32236503 | MS.gene99499:CDS | 40.0% |
| !! | AGTTGATGATGAGGACACAT+TGG | - | chr7.1:32236608-32236627 | None:intergenic | 40.0% |
| !! | GAAAGGCATTGGTCACATAT+TGG | - | chr7.1:32236294-32236313 | None:intergenic | 40.0% |
| !! | GGTTGATTGAGTTGATGATG+AGG | - | chr7.1:32236617-32236636 | None:intergenic | 40.0% |
| !! | GTTGATGATGAGGACACATT+GGG | - | chr7.1:32236607-32236626 | None:intergenic | 40.0% |
| !!! | AACTCTACCACTTTTTGCTC+AGG | - | chr7.1:32236031-32236050 | None:intergenic | 40.0% |
| !!! | ACCACTTTTTGCTCAGGTAA+AGG | - | chr7.1:32236025-32236044 | None:intergenic | 40.0% |
| !!! | ATGACTAATTTTTGGGGTGG+AGG | + | chr7.1:32236433-32236452 | MS.gene99499:CDS | 40.0% |
| AAGTCCACTTCCAAACCCTT+GGG | + | chr7.1:32235956-32235975 | MS.gene99499:CDS | 45.0% | |
| AATGCCTTTCCTTCTTGGCT+CGG | + | chr7.1:32236304-32236323 | MS.gene99499:CDS | 45.0% | |
| ATCACATACCAGGTTGCAAG+GGG | - | chr7.1:32236373-32236392 | None:intergenic | 45.0% | |
| CATCACATACCAGGTTGCAA+GGG | - | chr7.1:32236374-32236393 | None:intergenic | 45.0% | |
| CCCCAAGCAACAACACAATT+TGG | + | chr7.1:32236409-32236428 | MS.gene99499:CDS | 45.0% | |
| CTGCATTGCCAATTCCACAA+AGG | + | chr7.1:32236464-32236483 | MS.gene99499:CDS | 45.0% | |
| GGTTGTGCAAGTTAGCACTA+CGG | - | chr7.1:32236261-32236280 | None:intergenic | 45.0% | |
| GTCACATATTGGACGCCAAT+TGG | - | chr7.1:32236283-32236302 | None:intergenic | 45.0% | |
| TGACCAATGCCTTTCCTTCT+TGG | + | chr7.1:32236299-32236318 | MS.gene99499:CDS | 45.0% | |
| TGGCATTTGCATCACATACC+AGG | - | chr7.1:32236383-32236402 | None:intergenic | 45.0% | |
| TTCTCCACTTCTCAAGCTCT+TGG | + | chr7.1:32236076-32236095 | MS.gene99499:CDS | 45.0% | |
| ! | CCCAAAGTGTTTGACCTTTG+TGG | - | chr7.1:32236481-32236500 | None:intergenic | 45.0% |
| ! | GCTAACTTGCACAACCCAAT+TGG | + | chr7.1:32236265-32236284 | MS.gene99499:CDS | 45.0% |
| ! | GTTGTTGCTTGGGGTGAATT+TGG | - | chr7.1:32236403-32236422 | None:intergenic | 45.0% |
| !! | GGGATGACTAATTTTTGGGG+TGG | + | chr7.1:32236430-32236449 | MS.gene99499:CDS | 45.0% |
| ACCATATGGTGGCTATGGAG+GGG | + | chr7.1:32236330-32236349 | MS.gene99499:CDS | 50.0% | |
| ACCTCCAAGAGCTTGAGAAG+TGG | - | chr7.1:32236083-32236102 | None:intergenic | 50.0% | |
| ACTTCCAAACCCTTGGGGAA+TGG | + | chr7.1:32235962-32235981 | MS.gene99499:CDS | 50.0% | |
| AGTCCACTTCCAAACCCTTG+GGG | + | chr7.1:32235957-32235976 | MS.gene99499:CDS | 50.0% | |
| ATTCCCCAAGGGTTTGGAAG+TGG | - | chr7.1:32235963-32235982 | None:intergenic | 50.0% | |
| CAAATACACCCCTTGCAACC+TGG | + | chr7.1:32236362-32236381 | MS.gene99499:CDS | 50.0% | |
| CAAGTCCACTTCCAAACCCT+TGG | + | chr7.1:32235955-32235974 | MS.gene99499:CDS | 50.0% | |
| CACCATATGGTGGCTATGGA+GGG | + | chr7.1:32236329-32236348 | MS.gene99499:CDS | 50.0% | |
| CCTCAAACGCAAAATGGTGG+AGG | + | chr7.1:32235829-32235848 | MS.gene99499:CDS | 50.0% | |
| GAATGTCCACCATTCCCCAA+GGG | - | chr7.1:32235974-32235993 | None:intergenic | 50.0% | |
| GCATCACATACCAGGTTGCA+AGG | - | chr7.1:32236375-32236394 | None:intergenic | 50.0% | |
| GGTGTGAGTGCCAAGTCTTA+GGG | - | chr7.1:32235936-32235955 | None:intergenic | 50.0% | |
| GGTTCACCATATGGTGGCTA+TGG | + | chr7.1:32236325-32236344 | MS.gene99499:CDS | 50.0% | |
| TATGGTGAACCGAGCCAAGA+AGG | - | chr7.1:32236316-32236335 | None:intergenic | 50.0% | |
| TCACCATATGGTGGCTATGG+AGG | + | chr7.1:32236328-32236347 | MS.gene99499:CDS | 50.0% | |
| TCCACTTCTCAAGCTCTTGG+AGG | + | chr7.1:32236079-32236098 | MS.gene99499:CDS | 50.0% | |
| TGAACCGAGCCAAGAAGGAA+AGG | - | chr7.1:32236311-32236330 | None:intergenic | 50.0% | |
| TGAATGTCCACCATTCCCCA+AGG | - | chr7.1:32235975-32235994 | None:intergenic | 50.0% | |
| TGGTGTGAGTGCCAAGTCTT+AGG | - | chr7.1:32235937-32235956 | None:intergenic | 50.0% | |
| ! | CAAGGGTTTGGAAGTGGACT+TGG | - | chr7.1:32235957-32235976 | None:intergenic | 50.0% |
| ! | CAGGTTGCAAGGGGTGTATT+TGG | - | chr7.1:32236364-32236383 | None:intergenic | 50.0% |
| ! | CCTCCACCATTTTGCGTTTG+AGG | - | chr7.1:32235832-32235851 | None:intergenic | 50.0% |
| ! | GAGCCAAGAAGGAAAGGCAT+TGG | - | chr7.1:32236305-32236324 | None:intergenic | 50.0% |
| !! | TCTTGGCTCGGTTCACCATA+TGG | + | chr7.1:32236316-32236335 | MS.gene99499:CDS | 50.0% |
| ACCCCTCCATAGCCACCATA+TGG | - | chr7.1:32236334-32236353 | None:intergenic | 55.0% | |
| TCCAAACCCTTGGGGAATGG+TGG | + | chr7.1:32235965-32235984 | MS.gene99499:CDS | 55.0% | |
| TCCACCATTCCCCAAGGGTT+TGG | - | chr7.1:32235969-32235988 | None:intergenic | 55.0% | |
| !! | TGGCTCGGTTCACCATATGG+TGG | + | chr7.1:32236319-32236338 | MS.gene99499:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 32235788 | 32236639 | 32235788 | ID=MS.gene99499 |
| chr7.1 | mRNA | 32235788 | 32236639 | 32235788 | ID=MS.gene99499.t1;Parent=MS.gene99499 |
| chr7.1 | exon | 32235788 | 32236639 | 32235788 | ID=MS.gene99499.t1.exon1;Parent=MS.gene99499.t1 |
| chr7.1 | CDS | 32235788 | 32236639 | 32235788 | ID=cds.MS.gene99499.t1;Parent=MS.gene99499.t1 |
| Gene Sequence |
| Protein sequence |
