AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene99619

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene99619.t1 MTR_7g062220 91.483 317 23 2 1 313 1 317 0.0 596
MS.gene99619.t1 MTR_5g043880 41.830 153 81 4 121 269 124 272 8.61e-26 103
MS.gene99619.t1 MTR_4g094588 71.930 57 16 0 121 177 178 234 4.98e-23 97.8
MS.gene99619.t1 MTR_2g033820 52.941 85 29 1 121 194 203 287 2.31e-22 96.3
MS.gene99619.t1 MTR_1g086790 66.667 57 19 0 121 177 158 214 7.43e-22 94.4
MS.gene99619.t1 MTR_1g015140 64.912 57 20 0 121 177 102 158 1.54e-21 89.7
MS.gene99619.t1 MTR_8g092140 64.912 57 20 0 121 177 160 216 4.04e-21 90.5
MS.gene99619.t1 MTR_5g091390 66.667 57 19 0 121 177 157 213 4.07e-21 92.0
MS.gene99619.t1 MTR_7g109800 38.509 161 65 6 121 264 145 288 4.08e-21 91.7
MS.gene99619.t1 MTR_3g104750 63.158 57 21 0 121 177 104 160 5.83e-21 88.2
MS.gene99619.t1 MTR_3g095040 59.322 59 24 0 119 177 116 174 1.15e-20 88.6
MS.gene99619.t1 MTR_3g031220 64.912 57 20 0 121 177 365 421 1.34e-20 92.4
MS.gene99619.t1 MTR_3g031220 59.649 57 22 1 121 177 198 253 1.74e-14 74.3
MS.gene99619.t1 MTR_3g095080 64.912 57 20 0 121 177 168 224 1.69e-20 89.0
MS.gene99619.t1 MTR_5g094430 63.158 57 21 0 121 177 230 286 1.69e-20 91.3
MS.gene99619.t1 MTR_5g094430 57.895 57 23 1 121 177 66 121 3.12e-13 70.1
MS.gene99619.t1 MTR_5g094430 63.158 57 21 0 121 177 252 308 1.70e-20 91.7
MS.gene99619.t1 MTR_5g094430 57.895 57 23 1 121 177 88 143 2.53e-13 70.5
MS.gene99619.t1 MTR_7g028415 61.404 57 22 0 121 177 93 149 1.71e-20 87.0
MS.gene99619.t1 MTR_7g028710 61.404 57 22 0 121 177 93 149 1.71e-20 87.0
MS.gene99619.t1 MTR_3g095080 64.912 57 20 0 121 177 144 200 1.78e-20 88.2
MS.gene99619.t1 MTR_5g094430 63.158 57 21 0 121 177 364 420 1.80e-20 92.0
MS.gene99619.t1 MTR_5g094430 57.895 57 23 1 121 177 200 255 2.60e-13 70.9
MS.gene99619.t1 MTR_5g042920 62.712 59 22 0 119 177 318 376 2.67e-20 90.9
MS.gene99619.t1 MTR_5g042920 59.322 59 23 1 120 178 150 207 1.25e-14 74.3
MS.gene99619.t1 MTR_3g056100 63.158 57 21 0 121 177 415 471 2.92e-20 91.7
MS.gene99619.t1 MTR_3g056100 45.882 85 38 2 100 177 215 298 1.68e-13 71.2
MS.gene99619.t1 MTR_3g056100 63.158 57 21 0 121 177 402 458 2.98e-20 91.7
MS.gene99619.t1 MTR_3g056100 45.882 85 38 2 100 177 215 298 1.74e-13 71.2
MS.gene99619.t1 MTR_3g056100 63.158 57 21 0 121 177 258 314 3.23e-20 90.9
MS.gene99619.t1 MTR_3g056100 45.882 85 38 2 100 177 71 154 2.38e-13 70.5
MS.gene99619.t1 MTR_3g056100 63.158 57 21 0 121 177 271 327 3.41e-20 90.9
MS.gene99619.t1 MTR_3g056100 45.882 85 38 2 100 177 71 154 2.25e-13 70.9
MS.gene99619.t1 MTR_7g079010 63.158 57 21 0 121 177 141 197 4.26e-20 87.4
MS.gene99619.t1 MTR_4g122530 44.118 102 56 1 78 179 166 266 5.64e-20 90.1
MS.gene99619.t1 MTR_5g074400 63.158 57 21 0 121 177 420 476 1.54e-19 89.4
MS.gene99619.t1 MTR_5g074400 63.158 57 20 1 121 177 243 298 8.97e-16 78.2
MS.gene99619.t1 MTR_7g011820 61.017 59 23 0 119 177 408 466 2.07e-19 89.0
MS.gene99619.t1 MTR_7g011820 56.667 60 21 2 120 177 227 283 4.66e-13 69.7
MS.gene99619.t1 MTR_3g009470 46.226 106 44 3 121 220 495 593 2.43e-19 89.0
MS.gene99619.t1 MTR_3g009470 51.429 70 33 1 112 181 271 339 4.19e-14 73.2
MS.gene99619.t1 MTR_8g007270 42.063 126 64 3 56 177 90 210 4.01e-19 84.7
MS.gene99619.t1 MTR_4g082580 59.322 59 24 0 119 177 276 334 6.29e-19 86.7
MS.gene99619.t1 MTR_4g082580 54.386 57 26 0 121 177 145 201 2.16e-14 73.6
MS.gene99619.t1 MTR_8g092010 55.932 59 26 0 119 177 106 164 7.51e-19 82.8
MS.gene99619.t1 MTR_5g097490 58.333 60 25 0 118 177 249 308 1.90e-18 85.5
MS.gene99619.t1 MTR_4g130900 48.684 76 38 1 103 177 340 415 2.39e-18 85.5
MS.gene99619.t1 MTR_1g009613 50.667 75 33 2 107 177 245 319 4.25e-18 84.0
MS.gene99619.t1 MTR_7g100510 47.126 87 43 2 91 177 334 417 4.76e-18 84.3
MS.gene99619.t1 MTR_7g100510 58.929 56 22 1 122 177 190 244 1.86e-13 70.9
MS.gene99619.t1 MTR_7g071120 59.649 57 23 0 121 177 324 380 6.74e-18 84.3
MS.gene99619.t1 MTR_7g071120 61.017 59 18 2 121 177 166 221 1.43e-15 77.4
MS.gene99619.t1 MTR_1g070455 49.367 79 36 2 107 181 276 354 8.47e-18 83.2
MS.gene99619.t1 MTR_4g013260 59.649 57 23 0 121 177 336 392 2.34e-17 82.8
MS.gene99619.t1 MTR_4g013260 59.649 57 23 0 121 177 184 240 5.38e-17 81.6
MS.gene99619.t1 MTR_7g080020 57.895 57 24 0 121 177 493 549 4.04e-17 82.4
MS.gene99619.t1 MTR_7g080020 54.839 62 27 1 116 177 275 335 3.81e-13 70.5
MS.gene99619.t1 MTR_8g096730 50.877 57 28 0 121 177 70 126 4.10e-17 77.4
MS.gene99619.t1 MTR_4g127040 36.220 127 69 4 61 177 178 302 4.39e-17 80.5
MS.gene99619.t1 MTR_1g013760 49.333 75 37 1 122 195 141 215 4.44e-17 80.1
MS.gene99619.t1 MTR_3g106060 45.349 86 45 2 122 205 139 224 4.82e-17 80.1
MS.gene99619.t1 MTR_7g080000 57.895 57 24 0 121 177 432 488 4.85e-17 82.0
MS.gene99619.t1 MTR_7g080000 53.571 56 25 1 122 177 235 289 3.20e-11 64.3
MS.gene99619.t1 MTR_7g109600 57.576 66 27 1 113 177 45 110 6.10e-17 79.3
MS.gene99619.t1 MTR_3g108960 43.373 83 43 2 103 181 293 375 9.55e-17 80.5
MS.gene99619.t1 MTR_0117s0040 43.182 88 44 3 96 177 44 131 1.32e-16 78.2
MS.gene99619.t1 MTR_8g087000 47.253 91 45 3 93 181 48 137 1.51e-16 78.2
MS.gene99619.t1 MTR_8g087000 47.253 91 45 3 93 181 47 136 2.02e-16 77.8
MS.gene99619.t1 MTR_8g028565 48.718 78 37 2 103 179 139 214 2.48e-16 79.0
MS.gene99619.t1 MTR_5g016610 45.570 79 39 2 103 177 178 256 2.55e-16 77.8
MS.gene99619.t1 MTR_4g094908 45.570 79 39 2 103 177 245 323 2.81e-16 78.6
MS.gene99619.t1 MTR_6g053200 44.872 78 42 1 101 177 310 387 4.58e-16 79.0
MS.gene99619.t1 MTR_2g105060 52.632 57 26 1 122 177 95 151 5.56e-16 76.3
MS.gene99619.t1 MTR_2g032030 42.268 97 49 2 88 177 228 324 6.52e-16 78.2
MS.gene99619.t1 MTR_2g105060 52.632 57 26 1 122 177 170 226 6.92e-16 77.4
MS.gene99619.t1 MTR_2g032030 42.268 97 49 2 88 177 228 324 1.17e-15 77.8
MS.gene99619.t1 MTR_1g099600 45.000 80 43 1 99 177 163 242 1.23e-15 76.6
MS.gene99619.t1 MTR_8g099350 34.286 140 80 5 43 175 55 189 1.24e-15 77.0
MS.gene99619.t1 MTR_1g077780 54.237 59 27 0 119 177 60 118 1.37e-15 73.2
MS.gene99619.t1 MTR_6g086555 55.172 58 25 1 121 177 206 263 2.30e-15 76.6
MS.gene99619.t1 MTR_1g078260 56.897 58 24 1 121 177 247 304 2.36e-15 76.6
MS.gene99619.t1 MTR_2g016770 54.098 61 27 1 122 181 36 96 3.38e-15 73.6
MS.gene99619.t1 MTR_2g016770 54.098 61 27 1 122 181 28 88 3.89e-15 73.2
MS.gene99619.t1 MTR_4g107970 58.621 58 23 1 121 177 178 235 4.45e-15 75.9
MS.gene99619.t1 MTR_2g088000 42.857 91 48 3 92 181 323 410 5.19e-15 75.9
MS.gene99619.t1 MTR_4g107970 58.621 58 23 1 121 177 255 312 6.07e-15 75.9
MS.gene99619.t1 MTR_7g009730 48.611 72 35 2 107 177 206 276 6.91e-15 75.5
MS.gene99619.t1 MTR_3g053330 54.098 61 27 1 122 181 252 312 7.27e-15 75.1
MS.gene99619.t1 MTR_8g098945 53.226 62 28 1 117 177 125 186 1.05e-14 73.2
MS.gene99619.t1 MTR_4g132430 40.000 100 44 2 79 177 100 184 1.13e-14 73.9
MS.gene99619.t1 MTR_3g031220 59.649 57 22 1 121 177 198 253 1.24e-14 74.3
MS.gene99619.t1 MTR_2g083870 57.895 57 23 1 122 177 81 137 1.41e-14 72.8
MS.gene99619.t1 MTR_4g094412 47.222 72 36 2 107 177 230 300 1.59e-14 74.3
MS.gene99619.t1 MTR_4g094412 47.222 72 36 2 107 177 221 291 1.63e-14 74.3
MS.gene99619.t1 MTR_3g090860 57.377 61 23 1 118 175 130 190 1.66e-14 73.6
MS.gene99619.t1 MTR_7g110720 45.556 90 33 2 89 177 199 273 1.67e-14 73.9
MS.gene99619.t1 MTR_7g110720 45.556 90 33 2 89 177 172 246 1.85e-14 73.9
MS.gene99619.t1 MTR_7g079040 40.952 105 57 3 119 218 152 256 2.08e-14 73.2
MS.gene99619.t1 MTR_4g132430 38.318 107 50 2 79 184 234 325 2.18e-14 73.9
MS.gene99619.t1 MTR_2g023930 38.938 113 52 3 67 177 265 362 2.79e-14 73.6
MS.gene99619.t1 MTR_4g007060 50.820 61 29 1 122 181 129 189 3.01e-14 72.0
MS.gene99619.t1 MTR_3g009470 51.429 70 33 1 112 181 271 339 3.47e-14 73.2
MS.gene99619.t1 MTR_5g067680 52.542 59 25 1 121 176 202 260 3.77e-14 72.4
MS.gene99619.t1 MTR_4g007060 50.820 61 29 1 122 181 163 223 3.90e-14 72.0
MS.gene99619.t1 MTR_2g024380 50.000 76 32 3 119 189 249 323 8.98e-14 72.0
MS.gene99619.t1 MTR_8g067635 52.381 63 29 1 116 177 344 406 9.36e-14 72.0
MS.gene99619.t1 MTR_2g024350 53.333 60 27 1 119 177 6 65 9.67e-14 69.7
MS.gene99619.t1 MTR_1g013790 50.877 57 27 1 122 177 102 158 1.34e-13 69.7
MS.gene99619.t1 MTR_8g067650 50.794 63 30 1 116 177 334 396 6.13e-13 69.3
MS.gene99619.t1 MTR_2g045360 52.632 57 26 1 122 177 212 268 1.02e-12 68.6
MS.gene99619.t1 MTR_7g117200 49.275 69 28 2 114 175 107 175 1.72e-12 67.4
MS.gene99619.t1 MTR_8g027860 44.737 76 35 2 107 175 118 193 3.71e-12 66.6
MS.gene99619.t1 MTR_8g069935 49.153 59 29 1 120 177 330 388 6.09e-12 66.2
MS.gene99619.t1 MTR_5g074200 50.000 58 28 1 121 178 220 276 1.05e-11 65.1
MS.gene99619.t1 MTR_2g075610 50.000 60 27 1 119 175 27 86 1.55e-11 62.8
MS.gene99619.t1 MTR_8g005750 53.448 58 24 1 121 175 103 160 2.55e-11 63.5
MS.gene99619.t1 MTR_4g049760 50.877 57 27 1 122 177 291 347 2.77e-11 64.7
MS.gene99619.t1 MTR_0002s1250 51.724 58 25 1 121 175 111 168 3.07e-11 63.2
MS.gene99619.t1 MTR_2g075750 50.000 60 27 1 119 175 26 85 3.74e-11 61.6
MS.gene99619.t1 MTR_2g075700 49.231 65 30 1 119 180 142 206 6.92e-11 62.4
MS.gene99619.t1 MTR_7g073430 51.724 58 25 1 121 175 122 179 7.91e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene99619.t1 AT5G43290 42.745 255 128 8 30 273 21 268 2.12e-52 173
MS.gene99619.t1 AT1G69310 41.447 152 76 3 121 270 147 287 3.82e-28 110
MS.gene99619.t1 AT1G69310 41.447 152 76 3 121 270 147 287 3.82e-28 110
MS.gene99619.t1 AT1G69310 41.447 152 76 3 121 270 147 287 3.82e-28 110
MS.gene99619.t1 AT5G49520 35.359 181 94 3 121 281 221 398 6.70e-24 100
MS.gene99619.t1 AT4G39410 55.844 77 34 0 121 197 223 299 9.54e-23 96.3
MS.gene99619.t1 AT1G69310 38.816 152 76 4 121 270 147 283 1.05e-22 95.9
MS.gene99619.t1 AT2G47260 66.102 59 20 0 121 179 174 232 1.61e-22 96.3
MS.gene99619.t1 AT1G29860 68.421 57 18 0 121 177 136 192 3.39e-22 94.4
MS.gene99619.t1 AT4G18170 68.421 57 18 0 121 177 172 228 6.72e-22 94.4
MS.gene99619.t1 AT1G64000 64.912 57 20 0 121 177 114 170 1.42e-21 90.9
MS.gene99619.t1 AT2G25000 33.520 179 101 7 13 177 29 203 1.59e-21 92.4
MS.gene99619.t1 AT5G46350 66.667 57 19 0 121 177 183 239 4.37e-21 92.0
MS.gene99619.t1 AT2G04880 63.077 65 24 0 121 185 283 347 6.05e-21 93.2
MS.gene99619.t1 AT2G04880 67.500 40 13 0 121 160 111 150 1.91e-11 65.1
MS.gene99619.t1 AT2G03340 62.712 59 22 0 119 177 413 471 6.20e-21 93.2
MS.gene99619.t1 AT2G03340 45.833 96 40 3 90 177 214 305 8.15e-15 75.1
MS.gene99619.t1 AT1G13960 62.712 59 22 0 119 177 254 312 6.81e-21 92.0
MS.gene99619.t1 AT1G13960 62.069 58 21 1 120 177 75 131 4.50e-15 75.5
MS.gene99619.t1 AT2G04880 63.077 65 24 0 121 185 307 371 8.65e-21 92.8
MS.gene99619.t1 AT2G04880 67.500 40 13 0 121 160 111 150 1.70e-11 65.1
MS.gene99619.t1 AT1G13960 62.712 59 22 0 119 177 407 465 8.66e-21 92.8
MS.gene99619.t1 AT1G13960 62.069 58 21 1 120 177 228 284 3.62e-15 76.3
MS.gene99619.t1 AT5G41570 63.158 57 21 0 121 177 98 154 1.31e-20 87.8
MS.gene99619.t1 AT5G13080 61.404 57 22 0 121 177 67 123 4.18e-20 85.5
MS.gene99619.t1 AT5G07100 63.158 57 21 0 121 177 141 197 4.70e-20 87.0
MS.gene99619.t1 AT5G07100 54.098 61 28 0 117 177 20 80 2.29e-14 71.2
MS.gene99619.t1 AT5G07100 63.158 57 21 0 121 177 141 197 4.70e-20 87.0
MS.gene99619.t1 AT5G07100 54.098 61 28 0 117 177 20 80 2.29e-14 71.2
MS.gene99619.t1 AT5G07100 63.158 57 21 0 121 177 141 197 4.70e-20 87.0
MS.gene99619.t1 AT5G07100 54.098 61 28 0 117 177 20 80 2.29e-14 71.2
MS.gene99619.t1 AT5G07100 63.158 57 21 0 121 177 141 197 4.70e-20 87.0
MS.gene99619.t1 AT5G07100 54.098 61 28 0 117 177 20 80 2.29e-14 71.2
MS.gene99619.t1 AT2G25000 37.313 134 68 5 57 177 30 160 4.72e-20 87.4
MS.gene99619.t1 AT2G25000 37.313 134 68 5 57 177 30 160 4.72e-20 87.4
MS.gene99619.t1 AT3G62340 64.912 57 20 0 121 177 118 174 5.74e-20 88.2
MS.gene99619.t1 AT2G25000 33.939 165 92 6 27 177 21 182 5.75e-20 87.8
MS.gene99619.t1 AT2G46130 63.158 57 21 0 121 177 30 86 9.36e-20 83.2
MS.gene99619.t1 AT3G01080 38.710 124 63 2 119 242 304 414 9.44e-20 89.4
MS.gene99619.t1 AT3G01080 58.621 58 23 1 120 177 166 222 3.08e-13 70.1
MS.gene99619.t1 AT3G01080 38.710 124 63 2 119 242 342 452 9.68e-20 89.7
MS.gene99619.t1 AT3G01080 59.649 57 22 1 121 177 205 260 2.84e-13 70.5
MS.gene99619.t1 AT3G01970 59.649 57 23 0 121 177 65 121 1.25e-19 84.0
MS.gene99619.t1 AT5G07100 63.158 57 21 0 121 177 234 290 1.32e-19 87.8
MS.gene99619.t1 AT5G07100 37.719 114 53 2 117 230 113 208 2.87e-14 72.4
MS.gene99619.t1 AT5G56270 63.158 57 21 0 121 177 487 543 1.70e-19 89.4
MS.gene99619.t1 AT5G56270 57.576 66 27 1 116 181 268 332 2.36e-16 80.1
MS.gene99619.t1 AT5G26170 57.895 57 24 0 121 177 113 169 3.96e-19 83.6
MS.gene99619.t1 AT2G44745 63.793 58 21 0 121 178 145 202 5.35e-19 84.3
MS.gene99619.t1 AT4G26640 61.404 57 22 0 121 177 205 261 6.83e-19 86.7
MS.gene99619.t1 AT4G26640 59.322 59 23 1 119 177 33 90 5.42e-14 72.4
MS.gene99619.t1 AT4G26640 61.404 57 22 0 121 177 205 261 6.83e-19 86.7
MS.gene99619.t1 AT4G26640 59.322 59 23 1 119 177 33 90 5.42e-14 72.4
MS.gene99619.t1 AT4G26640 61.404 57 22 0 121 177 205 261 6.83e-19 86.7
MS.gene99619.t1 AT4G26640 59.322 59 23 1 119 177 33 90 5.42e-14 72.4
MS.gene99619.t1 AT4G26640 61.404 57 22 0 121 177 205 261 6.83e-19 86.7
MS.gene99619.t1 AT4G26640 59.322 59 23 1 119 177 33 90 5.42e-14 72.4
MS.gene99619.t1 AT4G26640 61.404 57 22 0 121 177 341 397 7.47e-19 87.4
MS.gene99619.t1 AT4G26640 59.322 59 23 1 119 177 169 226 4.94e-14 72.8
MS.gene99619.t1 AT4G26640 61.404 57 22 0 121 177 309 365 8.33e-19 87.0
MS.gene99619.t1 AT4G26640 59.322 59 23 1 119 177 137 194 5.41e-14 72.8
MS.gene99619.t1 AT4G26640 61.404 57 22 0 121 177 381 437 8.72e-19 87.0
MS.gene99619.t1 AT4G26640 59.322 59 23 1 119 177 209 266 5.43e-14 72.8
MS.gene99619.t1 AT2G38470 61.404 57 22 0 121 177 362 418 5.20e-18 84.7
MS.gene99619.t1 AT2G38470 62.069 58 21 1 120 177 183 239 1.02e-15 77.8
MS.gene99619.t1 AT4G31550 50.667 75 33 2 107 177 229 303 7.14e-18 83.2
MS.gene99619.t1 AT4G31550 50.667 75 33 2 107 177 228 302 7.72e-18 82.8
MS.gene99619.t1 AT5G64810 54.386 57 26 0 121 177 110 166 9.54e-18 80.1
MS.gene99619.t1 AT4G31800 54.237 59 26 1 122 179 112 170 1.03e-17 81.3
MS.gene99619.t1 AT2G21900 54.386 57 26 0 121 177 109 165 1.10e-17 80.5
MS.gene99619.t1 AT4G30935 46.835 79 41 1 100 177 309 387 1.37e-17 83.2
MS.gene99619.t1 AT4G30935 53.571 56 25 1 122 177 169 223 3.91e-11 63.9
MS.gene99619.t1 AT1G55600 54.098 61 28 0 121 181 307 367 1.39e-17 83.6
MS.gene99619.t1 AT2G30250 62.500 56 21 0 122 177 329 384 1.61e-17 82.8
MS.gene99619.t1 AT2G30250 56.140 57 24 1 121 177 166 221 1.91e-12 67.8
MS.gene99619.t1 AT2G23320 46.835 79 38 2 103 177 219 297 1.76e-17 82.0
MS.gene99619.t1 AT4G31800 54.237 59 26 1 122 179 177 235 1.94e-17 81.6
MS.gene99619.t1 AT2G34830 41.322 121 59 3 69 177 152 272 3.33e-17 82.0
MS.gene99619.t1 AT5G28650 49.367 79 36 2 103 177 241 319 4.03e-17 80.9
MS.gene99619.t1 AT2G34830 41.322 121 59 3 69 177 161 281 4.09e-17 81.6
MS.gene99619.t1 AT2G37260 57.895 57 24 0 121 177 269 325 4.29e-17 81.3
MS.gene99619.t1 AT2G37260 58.929 56 22 1 122 177 86 140 3.99e-14 72.4
MS.gene99619.t1 AT2G37260 57.895 57 24 0 121 177 267 323 4.34e-17 81.3
MS.gene99619.t1 AT2G37260 58.929 56 22 1 122 177 84 138 4.21e-14 72.4
MS.gene99619.t1 AT2G37260 57.895 57 24 0 121 177 349 405 4.99e-17 81.6
MS.gene99619.t1 AT2G37260 58.929 56 22 1 122 177 166 220 3.91e-14 72.8
MS.gene99619.t1 AT4G26440 56.897 58 25 0 121 178 372 429 6.94e-17 81.6
MS.gene99619.t1 AT4G26440 46.154 91 33 2 121 211 178 252 3.54e-16 79.3
MS.gene99619.t1 AT2G30590 42.708 96 49 3 90 181 281 374 7.28e-17 80.9
MS.gene99619.t1 AT3G04670 48.101 79 37 2 103 177 241 319 1.37e-16 79.3
MS.gene99619.t1 AT5G52830 60.000 60 23 1 119 177 163 222 1.94e-16 79.3
MS.gene99619.t1 AT2G24570 49.333 75 34 2 107 177 226 300 2.90e-16 78.6
MS.gene99619.t1 AT1G30650 44.248 113 53 4 74 177 163 274 3.04e-16 79.3
MS.gene99619.t1 AT1G80840 54.386 57 25 1 122 177 147 203 7.87e-16 77.0
MS.gene99619.t1 AT4G01250 48.718 78 37 2 103 179 112 187 1.20e-15 76.3
MS.gene99619.t1 AT1G29280 57.895 57 23 1 122 177 75 131 1.51e-15 75.5
MS.gene99619.t1 AT4G24240 41.758 91 47 3 91 177 250 338 1.88e-15 76.3
MS.gene99619.t1 AT1G68150 44.578 83 44 2 96 177 211 292 2.15e-15 76.3
MS.gene99619.t1 AT1G62300 39.604 101 59 2 83 181 273 373 3.74e-15 76.3
MS.gene99619.t1 AT3G58710 34.783 138 78 2 41 177 2 128 3.97e-15 74.7
MS.gene99619.t1 AT2G46400 48.148 81 34 2 103 175 81 161 4.54e-15 74.7
MS.gene99619.t1 AT5G15130 56.897 58 24 1 121 177 185 242 8.85e-15 75.1
MS.gene99619.t1 AT5G15130 56.897 58 24 1 121 177 227 284 9.71e-15 75.1
MS.gene99619.t1 AT3G58710 59.649 57 22 1 122 177 71 127 1.13e-14 73.2
MS.gene99619.t1 AT2G46130 56.140 57 21 1 121 177 30 82 1.85e-14 68.9
MS.gene99619.t1 AT5G45050 46.429 84 42 2 97 177 1126 1209 2.03e-14 74.3
MS.gene99619.t1 AT5G45050 46.429 84 42 2 97 177 1154 1237 2.11e-14 74.3
MS.gene99619.t1 AT5G45050 46.429 84 42 2 97 177 1015 1098 2.58e-14 74.3
MS.gene99619.t1 AT4G23550 56.140 57 24 1 122 177 141 197 2.73e-14 72.8
MS.gene99619.t1 AT2G40740 56.897 58 22 1 121 175 173 230 3.39e-14 72.0
MS.gene99619.t1 AT2G40740 56.897 58 22 1 121 175 182 239 3.84e-14 72.0
MS.gene99619.t1 AT4G04450 53.125 64 29 1 122 184 199 262 5.19e-14 72.8
MS.gene99619.t1 AT1G18860 45.783 83 42 3 96 177 216 296 8.08e-14 72.4
MS.gene99619.t1 AT4G04450 53.125 64 29 1 122 184 293 356 8.62e-14 72.0
MS.gene99619.t1 AT4G22070 55.738 61 26 1 122 181 298 358 1.32e-13 71.6
MS.gene99619.t1 AT4G22070 55.738 61 26 1 122 181 298 358 1.32e-13 71.6
MS.gene99619.t1 AT4G22070 55.738 61 26 1 122 181 298 358 1.32e-13 71.6
MS.gene99619.t1 AT4G22070 55.738 61 26 1 122 181 298 358 1.32e-13 71.6
MS.gene99619.t1 AT3G01080 59.649 57 22 1 121 177 205 260 1.35e-13 70.9
MS.gene99619.t1 AT4G01720 55.172 58 25 1 121 177 239 296 1.06e-12 68.9
MS.gene99619.t1 AT5G24110 35.897 117 58 4 76 175 54 170 1.68e-12 67.4
MS.gene99619.t1 AT4G11070 52.459 61 26 1 118 175 106 166 3.27e-12 66.2
MS.gene99619.t1 AT4G11070 52.459 61 26 1 118 175 138 198 3.45e-12 66.6
MS.gene99619.t1 AT1G66560 49.153 59 27 1 121 176 103 161 5.50e-12 65.1
MS.gene99619.t1 AT5G01900 41.121 107 48 5 122 213 111 217 2.00e-11 63.5
MS.gene99619.t1 AT2G40750 50.000 58 26 1 121 175 152 209 2.20e-11 64.3
MS.gene99619.t1 AT4G23810 50.820 61 27 1 118 175 155 215 2.20e-11 64.3
MS.gene99619.t1 AT1G69810 49.153 59 28 2 121 177 203 261 3.39e-11 63.9
MS.gene99619.t1 AT1G69810 49.153 59 28 2 121 177 145 203 4.06e-11 63.5
MS.gene99619.t1 AT1G66550 35.052 97 46 3 98 180 77 170 7.04e-11 62.0
MS.gene99619.t1 AT1G66550 44.444 63 32 1 121 180 103 165 7.78e-11 62.0

Find 79 sgRNAs with CRISPR-Local

Find 160 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATGAACTTCACTTGCTTTA+TGG 0.118410 7.1:-39373832 None:intergenic
TTGTGTACGGTCCAATAAAA+TGG 0.226460 7.1:-39373915 None:intergenic
CTTCACTTGCTTTATGGTCT+TGG 0.238976 7.1:-39373826 None:intergenic
TTCATTTCAAATATTTATTC+AGG 0.246385 7.1:+39372029 MS.gene99619:CDS
TTTGAAATGAAGTTATTAAA+AGG 0.250391 7.1:-39372017 None:intergenic
TTGATGAAAATTGTTGAAAT+TGG 0.253295 7.1:-39372103 None:intergenic
CCTCCAGCATCCTGGACTTC+TGG 0.254663 7.1:+39374067 MS.gene99619:CDS
TCAAGAGTTTACCTAGGATT+TGG 0.255247 7.1:-39372433 None:intergenic
ATACATATTAATTATTTAAA+TGG 0.263117 7.1:-39374134 None:intergenic
AGCCCAATCTAGTAATTCTT+TGG 0.285857 7.1:+39373880 MS.gene99619:CDS
AGAAAATAATGTCTTCTAAT+TGG 0.303170 7.1:+39371886 MS.gene99619:CDS
ATTGTTGAAATTGGTTACTA+TGG 0.305605 7.1:-39372094 None:intergenic
AATTACTAGATTGGGCTTCA+TGG 0.316924 7.1:-39373874 None:intergenic
TCACTATCTACATTGTTTGT+AGG 0.321367 7.1:-39374007 None:intergenic
GATTGTCCCACTATGAAATA+AGG 0.327297 7.1:-39373740 None:intergenic
TTCACTTGCTTTATGGTCTT+GGG 0.328292 7.1:-39373825 None:intergenic
CAAGAGTTTACCTAGGATTT+GGG 0.328816 7.1:-39372432 None:intergenic
GGATATAGGTGGAGGAAGTA+TGG 0.340368 7.1:+39372388 MS.gene99619:CDS
ATTGGACCGTACACAATATA+CGG 0.346452 7.1:+39373922 MS.gene99619:CDS
TTCCAAAGAATTACTAGATT+GGG 0.346671 7.1:-39373882 None:intergenic
TATACGGTCCAAGAAAATTT+CGG 0.390435 7.1:+39373938 MS.gene99619:CDS
AGAAGGGTTGCTTGAAGATA+TGG 0.390745 7.1:+39373964 MS.gene99619:CDS
TGCTTATCCTTATTTCATAG+TGG 0.391267 7.1:+39373733 MS.gene99619:CDS
GTTCCAAAGAATTACTAGAT+TGG 0.406024 7.1:-39373883 None:intergenic
CTCCATCATTGTCTTTGACA+TGG 0.406707 7.1:-39371865 None:intergenic
CACTATCTACATTGTTTGTA+GGG 0.407160 7.1:-39374006 None:intergenic
TAAGTGATTATGAGAGTGTC+AGG 0.409746 7.1:-39373689 None:intergenic
GCTTCTTAGCTCCACACCTT+GGG 0.410981 7.1:-39373643 None:intergenic
GCCTTGGACTTCTTCATTGG+TGG 0.411270 7.1:-39373782 None:intergenic
ACTTTGAAAATCAAATGCTT+TGG 0.412320 7.1:+39372346 MS.gene99619:CDS
GTAGCCTTGGACTTCTTCAT+TGG 0.412428 7.1:-39373785 None:intergenic
GGCAATGGGTTGGGTGATGA+TGG 0.433026 7.1:+39372367 MS.gene99619:CDS
TCCACTGCTTGTTATGCCGT+TGG 0.433996 7.1:+39374100 MS.gene99619:CDS
AAATGAAGTTATTAAAAGGT+TGG 0.435596 7.1:-39372013 None:intergenic
GAGAGTGTCAGGGTCTTCAT+TGG 0.440141 7.1:-39373678 None:intergenic
TGAAGATATGGTGCCATTCA+TGG 0.441742 7.1:+39373976 MS.gene99619:CDS
AAATCAAATGCTTTGGCAAT+GGG 0.442693 7.1:+39372353 MS.gene99619:CDS
TCCTTGTGAAGAGGTAGCCT+TGG 0.445914 7.1:-39373798 None:intergenic
AGGAGAAATGTGTGAGGAGA+AGG 0.447017 7.1:-39374047 None:intergenic
GGTTGGGTGATGATGGATAT+AGG 0.450448 7.1:+39372374 MS.gene99619:CDS
TCAGAGTTTCTATATTAGAA+AGG 0.451303 7.1:+39372296 MS.gene99619:intron
CAAGAAAATTTCGGCTCAGA+AGG 0.452520 7.1:+39373947 MS.gene99619:CDS
AAAATCAAATGCTTTGGCAA+TGG 0.453326 7.1:+39372352 MS.gene99619:CDS
TGAAGAATCATCACTTATGT+TGG 0.454606 7.1:-39371985 None:intergenic
TGCTTCTTAGCTCCACACCT+TGG 0.455894 7.1:-39373644 None:intergenic
ATATGGTGCCATTCATGGTT+AGG 0.460181 7.1:+39373981 MS.gene99619:CDS
AAATGCTTTGGCAATGGGTT+GGG 0.461090 7.1:+39372358 MS.gene99619:CDS
CTTAGCTCCACACCTTGGGT+TGG 0.467655 7.1:-39373639 None:intergenic
CAACCAGAAGTCCAGGATGC+TGG 0.475602 7.1:-39374070 None:intergenic
TGTGTACGGTCCAATAAAAT+GGG 0.485883 7.1:-39373914 None:intergenic
CTTGCTTTATGGTCTTGGGT+TGG 0.490234 7.1:-39373821 None:intergenic
GCTTATCCTTATTTCATAGT+GGG 0.490566 7.1:+39373734 MS.gene99619:CDS
ACATTTCTCCTCCAGCATCC+TGG 0.492467 7.1:+39374059 MS.gene99619:CDS
CTTGGACCGTATATTGTGTA+CGG 0.504252 7.1:-39373928 None:intergenic
TCAAGAATAGCCCAAATCCT+AGG 0.505398 7.1:+39372422 MS.gene99619:CDS
GAACAAACAGGAGTTACTAT+AGG 0.514245 7.1:+39373612 MS.gene99619:intron
GGCATAACAAGCAGTGGAAG+TGG 0.518937 7.1:-39374095 None:intergenic
GTAGGGTTCCTAACCATGAA+TGG 0.519809 7.1:-39373989 None:intergenic
ACTCTCATAATCACTTATGA+AGG 0.527480 7.1:+39373695 MS.gene99619:CDS
CAAATGCTTTGGCAATGGGT+TGG 0.534026 7.1:+39372357 MS.gene99619:CDS
AGTGGAACAACCAGAAGTCC+AGG 0.537579 7.1:-39374077 None:intergenic
AATGGTAGAATTTAAGCCAA+CGG 0.540942 7.1:-39374116 None:intergenic
ATCCATGTCAAAGACAATGA+TGG 0.541467 7.1:+39371863 MS.gene99619:CDS
TTGGGTTGGTCCTTGTGAAG+AGG 0.546121 7.1:-39373807 None:intergenic
AAGGATAAGCAAAGTGCAAG+TGG 0.571322 7.1:-39373721 None:intergenic
AAGAAAATTTCGGCTCAGAA+GGG 0.589966 7.1:+39373948 MS.gene99619:CDS
GCCAACGGCATAACAAGCAG+TGG 0.602323 7.1:-39374101 None:intergenic
AAGGTGTGGAGCTAAGAAGC+AGG 0.603446 7.1:+39373646 MS.gene99619:CDS
AGGTGCACCAACCCAAGGTG+TGG 0.606638 7.1:+39373632 MS.gene99619:CDS
AAAGCAAGTGAAGTTCATGA+AGG 0.612429 7.1:+39373836 MS.gene99619:CDS
TCCAAGGCTACCTCTTCACA+AGG 0.631287 7.1:+39373797 MS.gene99619:CDS
ACTATAGGTGCACCAACCCA+AGG 0.643448 7.1:+39373627 MS.gene99619:CDS
ATGTTGGTTACTCTCTCATG+TGG 0.644375 7.1:-39371969 None:intergenic
CCAGAAGTCCAGGATGCTGG+AGG 0.654201 7.1:-39374067 None:intergenic
GTGATGATGGATATAGGTGG+AGG 0.658043 7.1:+39372380 MS.gene99619:CDS
TGCTGGAGGAGAAATGTGTG+AGG 0.659301 7.1:-39374053 None:intergenic
TCCACCAATGAAGAAGTCCA+AGG 0.666966 7.1:+39373781 MS.gene99619:CDS
TGGGTGATGATGGATATAGG+TGG 0.667370 7.1:+39372377 MS.gene99619:CDS
AAGTGATTATGAGAGTGTCA+GGG 0.690845 7.1:-39373688 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTGCTTATAATAT+GGG - chr7.1:39372894-39372913 None:intergenic 10.0%
!!! TTTTTTTTTTGCTTATAATA+TGG - chr7.1:39372895-39372914 None:intergenic 10.0%
!! AAGAAAATATATAAAAGTGA+AGG - chr7.1:39372486-39372505 None:intergenic 15.0%
!! TTCATTTCAAATATTTATTC+AGG + chr7.1:39372029-39372048 MS.gene99619:CDS 15.0%
!!! ATAAAAAAGTTGAATGTTTT+AGG - chr7.1:39373170-39373189 None:intergenic 15.0%
!!! GTATTTTGATATGAAAAAAT+CGG - chr7.1:39372862-39372881 None:intergenic 15.0%
!!! TACTTCAACTTTTTTTTTTT+TGG + chr7.1:39372137-39372156 MS.gene99619:intron 15.0%
!!! TTTGAAATGAAGTTATTAAA+AGG - chr7.1:39372020-39372039 None:intergenic 15.0%
!! AAATGAAGTTATTAAAAGGT+TGG - chr7.1:39372016-39372035 None:intergenic 20.0%
!! AATCTTCTCAAATTAGTTAA+GGG - chr7.1:39373542-39373561 None:intergenic 20.0%
!! AATGCATATATATAGTAGTT+TGG + chr7.1:39372562-39372581 MS.gene99619:intron 20.0%
!! AGAAAATAATGTCTTCTAAT+TGG + chr7.1:39371886-39371905 MS.gene99619:CDS 20.0%
!! CAACAAATTCAAATTCATTT+AGG - chr7.1:39372770-39372789 None:intergenic 20.0%
!! CTAAAAAATGCTTCATAAAA+GGG + chr7.1:39373246-39373265 MS.gene99619:intron 20.0%
!! GATAATGAAATACTAGTTAA+AGG - chr7.1:39373029-39373048 None:intergenic 20.0%
!! TAATCTTCTCAAATTAGTTA+AGG - chr7.1:39373543-39373562 None:intergenic 20.0%
!! TACTATATATATGCATTAAC+AGG - chr7.1:39372559-39372578 None:intergenic 20.0%
!! TCTAAAAAATGCTTCATAAA+AGG + chr7.1:39373245-39373264 MS.gene99619:intron 20.0%
!! TTGATGAAAATTGTTGAAAT+TGG - chr7.1:39372106-39372125 None:intergenic 20.0%
!!! AACGAGTTTTATATATTCTA+AGG + chr7.1:39372975-39372994 MS.gene99619:intron 20.0%
!!! ATTTTGCACTCTTATTTTTA+AGG - chr7.1:39373368-39373387 None:intergenic 20.0%
!!! TATAAAATTTGAAACTTGCA+AGG - chr7.1:39373198-39373217 None:intergenic 20.0%
!!! TCTTTTACATGTAATGTAAT+GGG + chr7.1:39372459-39372478 MS.gene99619:intron 20.0%
!!! TTCTTTTACATGTAATGTAA+TGG + chr7.1:39372458-39372477 MS.gene99619:intron 20.0%
!!! TTTTATAGTTGCATATCAAT+TGG + chr7.1:39373087-39373106 MS.gene99619:intron 20.0%
! AAACCAATCATACTATACTA+TGG - chr7.1:39373439-39373458 None:intergenic 25.0%
! AATTACACACATCAAATAAG+TGG - chr7.1:39372258-39372277 None:intergenic 25.0%
! ACAATTCTAATGTGTATCTA+AGG + chr7.1:39373311-39373330 MS.gene99619:intron 25.0%
! ATCAAATAAGTGGACAAAAT+TGG - chr7.1:39372248-39372267 None:intergenic 25.0%
! ATGGAAAAACAAACATTTAG+AGG + chr7.1:39372823-39372842 MS.gene99619:intron 25.0%
! ATTGTTGAAATTGGTTACTA+TGG - chr7.1:39372097-39372116 None:intergenic 25.0%
! CACATTAGAATTGTCAATTA+TGG - chr7.1:39373305-39373324 None:intergenic 25.0%
! TATATATGCATTAACAGGAT+TGG - chr7.1:39372554-39372573 None:intergenic 25.0%
! TCAGAGTTTCTATATTAGAA+AGG + chr7.1:39372296-39372315 MS.gene99619:intron 25.0%
! TTACTCATTAATCCTATAGT+CGG - chr7.1:39373058-39373077 None:intergenic 25.0%
! TTCCAAAGAATTACTAGATT+GGG - chr7.1:39373885-39373904 None:intergenic 25.0%
!! ACTTGCATGGTAATTTTATT+AGG + chr7.1:39372163-39372182 MS.gene99619:intron 25.0%
!! ACTTTGAAAATCAAATGCTT+TGG + chr7.1:39372346-39372365 MS.gene99619:CDS 25.0%
!! ATATGCAACTATAAAAGTGT+GGG - chr7.1:39373083-39373102 None:intergenic 25.0%
!! CTAGACACTATCAATTTTAT+AGG - chr7.1:39372686-39372705 None:intergenic 25.0%
!! CTTTTACATGTAATGTAATG+GGG + chr7.1:39372460-39372479 MS.gene99619:intron 25.0%
!! GCAAGTTTCAAATTTTATAG+TGG + chr7.1:39373199-39373218 MS.gene99619:intron 25.0%
!! TTCAACAATTTTCATCAACA+AGG + chr7.1:39372108-39372127 MS.gene99619:CDS 25.0%
!! TTTTTGCTTATAATATGGGA+CGG - chr7.1:39372890-39372909 None:intergenic 25.0%
!!! ATGAAGCATTTTTTAGAAAC+TGG - chr7.1:39373242-39373261 None:intergenic 25.0%
!!! ATGACAAATTTTTTATGCCA+TGG + chr7.1:39373590-39373609 MS.gene99619:intron 25.0%
!!! TTTTTTTTGGTTAACTTGCA+TGG + chr7.1:39372150-39372169 MS.gene99619:intron 25.0%
AAAATCAAATGCTTTGGCAA+TGG + chr7.1:39372352-39372371 MS.gene99619:CDS 30.0%
AAATCAAATGCTTTGGCAAT+GGG + chr7.1:39372353-39372372 MS.gene99619:CDS 30.0%
AATGGTAGAATTTAAGCCAA+CGG - chr7.1:39374119-39374138 None:intergenic 30.0%
ACTCTCATAATCACTTATGA+AGG + chr7.1:39373695-39373714 MS.gene99619:CDS 30.0%
ATATGCAACTGTACTATAGT+CGG - chr7.1:39373135-39373154 None:intergenic 30.0%
CAAAAATGACTCGTTATTGA+TGG + chr7.1:39372804-39372823 MS.gene99619:intron 30.0%
CACTATCTACATTGTTTGTA+GGG - chr7.1:39374009-39374028 None:intergenic 30.0%
CTACCATAGTATAGTATGAT+TGG + chr7.1:39373433-39373452 MS.gene99619:intron 30.0%
GATATGCAACTATAAAAGTG+TGG - chr7.1:39373084-39373103 None:intergenic 30.0%
GTTCCAAAGAATTACTAGAT+TGG - chr7.1:39373886-39373905 None:intergenic 30.0%
TATACGGTCCAAGAAAATTT+CGG + chr7.1:39373938-39373957 MS.gene99619:CDS 30.0%
TCACTATCTACATTGTTTGT+AGG - chr7.1:39374010-39374029 None:intergenic 30.0%
TGAAGAATCATCACTTATGT+TGG - chr7.1:39371988-39372007 None:intergenic 30.0%
! ACTCATTTCACCCATTTTAT+TGG + chr7.1:39373904-39373923 MS.gene99619:CDS 30.0%
! AGCATTTTCAATATCTGAGA+TGG - chr7.1:39372060-39372079 None:intergenic 30.0%
! GCTTATCCTTATTTCATAGT+GGG + chr7.1:39373734-39373753 MS.gene99619:CDS 30.0%
! TATGCAACTATAAAAGTGTG+GGG - chr7.1:39373082-39373101 None:intergenic 30.0%
! TGCTTATCCTTATTTCATAG+TGG + chr7.1:39373733-39373752 MS.gene99619:CDS 30.0%
!! CATCAATAACGAGTCATTTT+TGG - chr7.1:39372806-39372825 None:intergenic 30.0%
!! GAATTTGTTGTAGTAGTAGA+AGG + chr7.1:39372780-39372799 MS.gene99619:intron 30.0%
!! TTTTCAATATCTGAGATGGT+AGG - chr7.1:39372056-39372075 None:intergenic 30.0%
AAAGCAAGTGAAGTTCATGA+AGG + chr7.1:39373836-39373855 MS.gene99619:CDS 35.0%
AAGAAAATTTCGGCTCAGAA+GGG + chr7.1:39373948-39373967 MS.gene99619:CDS 35.0%
AATTACTAGATTGGGCTTCA+TGG - chr7.1:39373877-39373896 None:intergenic 35.0%
ACAAAACCTACTACTAGCAT+TGG - chr7.1:39373339-39373358 None:intergenic 35.0%
AGAAAGTCAAGAGTTTACCT+AGG - chr7.1:39372442-39372461 None:intergenic 35.0%
AGCCCAATCTAGTAATTCTT+TGG + chr7.1:39373880-39373899 MS.gene99619:CDS 35.0%
AGTGCAAAATGAATCAATGC+AGG + chr7.1:39373378-39373397 MS.gene99619:intron 35.0%
ATCCATGTCAAAGACAATGA+TGG + chr7.1:39371863-39371882 MS.gene99619:CDS 35.0%
ATTATCTTCCAACCGACTAT+AGG + chr7.1:39373043-39373062 MS.gene99619:intron 35.0%
ATTGGACCGTACACAATATA+CGG + chr7.1:39373922-39373941 MS.gene99619:CDS 35.0%
CAAAACCTACTACTAGCATT+GGG - chr7.1:39373338-39373357 None:intergenic 35.0%
CAAGAGTTTACCTAGGATTT+GGG - chr7.1:39372435-39372454 None:intergenic 35.0%
CATGAACTTCACTTGCTTTA+TGG - chr7.1:39373835-39373854 None:intergenic 35.0%
GAACAAACAGGAGTTACTAT+AGG + chr7.1:39373612-39373631 MS.gene99619:intron 35.0%
GATTGTCCCACTATGAAATA+AGG - chr7.1:39373743-39373762 None:intergenic 35.0%
GCAGGGTTATACTTACAAAA+GGG + chr7.1:39373396-39373415 MS.gene99619:intron 35.0%
GTGCAAAATGAATCAATGCA+GGG + chr7.1:39373379-39373398 MS.gene99619:intron 35.0%
TCAAGAGTTTACCTAGGATT+TGG - chr7.1:39372436-39372455 None:intergenic 35.0%
TCATTAATCCTATAGTCGGT+TGG - chr7.1:39373054-39373073 None:intergenic 35.0%
TGCAGGGTTATACTTACAAA+AGG + chr7.1:39373395-39373414 MS.gene99619:intron 35.0%
TGTGTACGGTCCAATAAAAT+GGG - chr7.1:39373917-39373936 None:intergenic 35.0%
TTAGGCTTAGTTGCATGAAT+TGG + chr7.1:39372181-39372200 MS.gene99619:intron 35.0%
TTCACTTGCTTTATGGTCTT+GGG - chr7.1:39373828-39373847 None:intergenic 35.0%
TTGTGTACGGTCCAATAAAA+TGG - chr7.1:39373918-39373937 None:intergenic 35.0%
! GGTCATATGCTTGTTAGATT+TGG + chr7.1:39372211-39372230 MS.gene99619:intron 35.0%
! TTTTATGCCATGGAACAAAC+AGG + chr7.1:39373600-39373619 MS.gene99619:intron 35.0%
!! AAGTGATTATGAGAGTGTCA+GGG - chr7.1:39373691-39373710 None:intergenic 35.0%
!! ACTGTACTATAGTCGGTTTT+AGG - chr7.1:39373128-39373147 None:intergenic 35.0%
!! AGGATTAGTTGAGTTGATCA+TGG - chr7.1:39373009-39373028 None:intergenic 35.0%
!! GCATTAACAGGATTGGTTTA+AGG - chr7.1:39372547-39372566 None:intergenic 35.0%
!! TAAGTGATTATGAGAGTGTC+AGG - chr7.1:39373692-39373711 None:intergenic 35.0%
!!! CTATAGTCGGTTTTAGGTAA+TGG - chr7.1:39373122-39373141 None:intergenic 35.0%
AAGGATAAGCAAAGTGCAAG+TGG - chr7.1:39373724-39373743 None:intergenic 40.0%
ACCTTGCCTAGTGAATCAAT+TGG + chr7.1:39373273-39373292 MS.gene99619:intron 40.0%
AGAAGGGTTGCTTGAAGATA+TGG + chr7.1:39373964-39373983 MS.gene99619:CDS 40.0%
AGTAACTCCTGTTTGTTCCA+TGG - chr7.1:39373610-39373629 None:intergenic 40.0%
CAAGAAAATTTCGGCTCAGA+AGG + chr7.1:39373947-39373966 MS.gene99619:CDS 40.0%
CCTAGTGAATCAATTGGGTT+GGG + chr7.1:39373279-39373298 MS.gene99619:intron 40.0%
CCTTGCCTAGTGAATCAATT+GGG + chr7.1:39373274-39373293 MS.gene99619:intron 40.0%
CTAACAAGCATATGACCAGT+TGG - chr7.1:39372208-39372227 None:intergenic 40.0%
CTCCATCATTGTCTTTGACA+TGG - chr7.1:39371868-39371887 None:intergenic 40.0%
CTTCACTTGCTTTATGGTCT+TGG - chr7.1:39373829-39373848 None:intergenic 40.0%
CTTGGACCGTATATTGTGTA+CGG - chr7.1:39373931-39373950 None:intergenic 40.0%
TCAAGAATAGCCCAAATCCT+AGG + chr7.1:39372422-39372441 MS.gene99619:CDS 40.0%
TGCTTATAATATGGGACGGA+GGG - chr7.1:39372886-39372905 None:intergenic 40.0%
TTGCTTATAATATGGGACGG+AGG - chr7.1:39372887-39372906 None:intergenic 40.0%
! AAATGCTTTGGCAATGGGTT+GGG + chr7.1:39372358-39372377 MS.gene99619:CDS 40.0%
! AATTGATTCACTAGGCAAGG+TGG - chr7.1:39373274-39373293 None:intergenic 40.0%
! ATGTTGGTTACTCTCTCATG+TGG - chr7.1:39371972-39371991 None:intergenic 40.0%
! ATTGATTCACTAGGCAAGGT+GGG - chr7.1:39373273-39373292 None:intergenic 40.0%
! CTTCTGAGCCGAAATTTTCT+TGG - chr7.1:39373949-39373968 None:intergenic 40.0%
!! ATATGGTGCCATTCATGGTT+AGG + chr7.1:39373981-39374000 MS.gene99619:CDS 40.0%
!! TGAAGATATGGTGCCATTCA+TGG + chr7.1:39373976-39373995 MS.gene99619:CDS 40.0%
!!! AGTCGGTTTTAGGTAATGGA+AGG - chr7.1:39373118-39373137 None:intergenic 40.0%
!!! GTCGGTTTTAGGTAATGGAA+GGG - chr7.1:39373117-39373136 None:intergenic 40.0%
AAGGACCCAATGCTAGTAGT+AGG + chr7.1:39373330-39373349 MS.gene99619:intron 45.0%
AGGAGAAATGTGTGAGGAGA+AGG - chr7.1:39374050-39374069 None:intergenic 45.0%
CAAATGCTTTGGCAATGGGT+TGG + chr7.1:39372357-39372376 MS.gene99619:CDS 45.0%
GCCTAGTGAATCAATTGGGT+TGG + chr7.1:39373278-39373297 MS.gene99619:intron 45.0%
GGATATAGGTGGAGGAAGTA+TGG + chr7.1:39372388-39372407 MS.gene99619:CDS 45.0%
GTAGGGTTCCTAACCATGAA+TGG - chr7.1:39373992-39374011 None:intergenic 45.0%
GTTGCATGAATTGGACCAAC+TGG + chr7.1:39372190-39372209 MS.gene99619:intron 45.0%
TCCACCAATGAAGAAGTCCA+AGG + chr7.1:39373781-39373800 MS.gene99619:CDS 45.0%
TTGATTCACTAGGCAAGGTG+GGG - chr7.1:39373272-39373291 None:intergenic 45.0%
! CCCAACCCAATTGATTCACT+AGG - chr7.1:39373282-39373301 None:intergenic 45.0%
! CCCAATTGATTCACTAGGCA+AGG - chr7.1:39373277-39373296 None:intergenic 45.0%
! CTTGCTTTATGGTCTTGGGT+TGG - chr7.1:39373824-39373843 None:intergenic 45.0%
! GTAGCCTTGGACTTCTTCAT+TGG - chr7.1:39373788-39373807 None:intergenic 45.0%
!! GGTTGGGTGATGATGGATAT+AGG + chr7.1:39372374-39372393 MS.gene99619:CDS 45.0%
!! GTGATGATGGATATAGGTGG+AGG + chr7.1:39372380-39372399 MS.gene99619:CDS 45.0%
!! TGGGTGATGATGGATATAGG+TGG + chr7.1:39372377-39372396 MS.gene99619:CDS 45.0%
AAGGTGTGGAGCTAAGAAGC+AGG + chr7.1:39373646-39373665 MS.gene99619:CDS 50.0%
ACATTTCTCCTCCAGCATCC+TGG + chr7.1:39374059-39374078 MS.gene99619:CDS 50.0%
ACTATAGGTGCACCAACCCA+AGG + chr7.1:39373627-39373646 MS.gene99619:CDS 50.0%
AGTGGAACAACCAGAAGTCC+AGG - chr7.1:39374080-39374099 None:intergenic 50.0%
GCCTTGGACTTCTTCATTGG+TGG - chr7.1:39373785-39373804 None:intergenic 50.0%
GCTTCTTAGCTCCACACCTT+GGG - chr7.1:39373646-39373665 None:intergenic 50.0%
GGCATAACAAGCAGTGGAAG+TGG - chr7.1:39374098-39374117 None:intergenic 50.0%
TCCAAGGCTACCTCTTCACA+AGG + chr7.1:39373797-39373816 MS.gene99619:CDS 50.0%
TCCTTGTGAAGAGGTAGCCT+TGG - chr7.1:39373801-39373820 None:intergenic 50.0%
TGCTGGAGGAGAAATGTGTG+AGG - chr7.1:39374056-39374075 None:intergenic 50.0%
TGCTTCTTAGCTCCACACCT+TGG - chr7.1:39373647-39373666 None:intergenic 50.0%
!! GAGAGTGTCAGGGTCTTCAT+TGG - chr7.1:39373681-39373700 None:intergenic 50.0%
!! TCCACTGCTTGTTATGCCGT+TGG + chr7.1:39374100-39374119 MS.gene99619:CDS 50.0%
!! TTGGGTTGGTCCTTGTGAAG+AGG - chr7.1:39373810-39373829 None:intergenic 50.0%
CAACCAGAAGTCCAGGATGC+TGG - chr7.1:39374073-39374092 None:intergenic 55.0%
CTTAGCTCCACACCTTGGGT+TGG - chr7.1:39373642-39373661 None:intergenic 55.0%
GCCAACGGCATAACAAGCAG+TGG - chr7.1:39374104-39374123 None:intergenic 55.0%
!! GGCAATGGGTTGGGTGATGA+TGG + chr7.1:39372367-39372386 MS.gene99619:CDS 55.0%
AGGTGCACCAACCCAAGGTG+TGG + chr7.1:39373632-39373651 MS.gene99619:CDS 60.0%
CCAGAAGTCCAGGATGCTGG+AGG - chr7.1:39374070-39374089 None:intergenic 60.0%
CCTCCAGCATCCTGGACTTC+TGG + chr7.1:39374067-39374086 MS.gene99619:CDS 60.0%


Chromosome Type Strat End Strand Name
chr7.1 gene 39371852 39374141 39371852 ID=MS.gene99619
chr7.1 mRNA 39371852 39374141 39371852 ID=MS.gene99619.t1;Parent=MS.gene99619
chr7.1 exon 39371852 39372129 39371852 ID=MS.gene99619.t1.exon1;Parent=MS.gene99619.t1
chr7.1 CDS 39371852 39372129 39371852 ID=cds.MS.gene99619.t1;Parent=MS.gene99619.t1
chr7.1 exon 39372300 39372443 39372300 ID=MS.gene99619.t1.exon2;Parent=MS.gene99619.t1
chr7.1 CDS 39372300 39372443 39372300 ID=cds.MS.gene99619.t1;Parent=MS.gene99619.t1
chr7.1 exon 39373622 39374141 39373622 ID=MS.gene99619.t1.exon3;Parent=MS.gene99619.t1
chr7.1 CDS 39373622 39374141 39373622 ID=cds.MS.gene99619.t1;Parent=MS.gene99619.t1
Gene Sequence

>MS.gene99619

ATGATTGACTCATCCATGTCAAAGACAATGATGGAGAAAATAATGTCTTCTAATTGGTCAGAGAATGATGAACTTTTAAGAGAGCTTTTAGTTGATGAGTCTTCTCTTCTTATGTTGCCACATGAGAGAGTAACCAACATAAGTGATGATTCTTCAAAAGACCAACCTTTTAATAACTTCATTTCAAATATTTATTCAGGTCCTACCATCTCAGATATTGAAAATGCTTTGTTAGTTACTAACCATAGTAACCAATTTCAACAATTTTCATCAACAAGGTAAGAATACTTCAACTTTTTTTTTTTTGGTTAACTTGCATGGTAATTTTATTAGGCTTAGTTGCATGAATTGGACCAACTGGTCATATGCTTGTTAGATTTGGAGAATTGTTTACCAATTTTGTCCACTTATTTGATGTGTGTAATTGTGTTTCATATTTTCATTTCAGAGTTTCTATATTAGAAAGGAGTTTGAGTAAGATTGAGAATAAGTATACTTTGAAAATCAAATGCTTTGGCAATGGGTTGGGTGATGATGGATATAGGTGGAGGAAGTATGGTCAGAAATCAATCAAGAATAGCCCAAATCCTAGGTAAACTCTTGACTTTCTTTTACATGTAATGTAATGGGGCCTTCACTTTTATATATTTTCTTTGTTTTGCTCATTTACTTGTGAATTTTTTTAGATATTTCCTTAAACCAATCCTGTTAATGCATATATATAGTAGTTTGGCAATAGTTTTAAATATCTTTCTCAAACAAAGTTGATTTAGTTCAATAAAATAAATACAACTTCAATAGATTAATGAAATACATACAACTATTTACTCACCTATAAAATTGATAGTGTCTAGAAAATTTTAAGTAAAACTTAATCAAGTTGTAGACTTGTCACAAGTTATATCTATAAAATCTCCTAAATGAATTTGAATTTGTTGTAGTAGTAGAAGGCCAAAAATGACTCGTTATTGATGGAAAAACAAACATTTAGAGGTTGAACTTTGAGTCCGATTTTTTCATATCAAAATACTCCCTCCGTCCCATATTATAAGCAAAAAAAAAAAAAAATCACACTTATTAAGAAAACTAAATACTTGCACGTGTATTGTAAGTAAGATTGTCTAACGAGTTTTATATATTCTAAGGCTTCTTTACCATGATCAACTCAACTAATCCTTTAACTAGTATTTCATTATCTTCCAACCGACTATAGGATTAATGAGTAAGCCCCACACTTTTATAGTTGCATATCAATTGGAAAACCCTTCCATTACCTAAAACCGACTATAGTACAGTTGCATATCAAATTCAATCACCTAAAACATTCAACTTTTTTATCAAAACCTTGCAAGTTTCAAATTTTATAGTGGCAAAAGCAAGCATGAAACCAGTTTCTAAAAAATGCTTCATAAAAGGGCCCCACCTTGCCTAGTGAATCAATTGGGTTGGGCCATAATTGACAATTCTAATGTGTATCTAAGGACCCAATGCTAGTAGTAGGTTTTGTATATATCCTTAAAAATAAGAGTGCAAAATGAATCAATGCAGGGTTATACTTACAAAAGGGTAATACAACTTTATCTACCATAGTATAGTATGATTGGTTTAAAAAGTAATTTCTATTTACATTTTCTGATTGTTTTAACTTTTTAATATTCAAAAAAGTGAAAACAATGATTCAAAGATGCCCTTAACTAATTTGAGAAGATTAATTTCACAATACAAAATTTAATTTTTCATGACAAATTTTTTATGCCATGGAACAAACAGGAGTTACTATAGGTGCACCAACCCAAGGTGTGGAGCTAAGAAGCAGGTTGAGAGATCCAATGAAGACCCTGACACTCTCATAATCACTTATGAAGGACTCCACTTGCACTTTGCTTATCCTTATTTCATAGTGGGACAATCACATCAATCTCATTCTCATCCACCAATGAAGAAGTCCAAGGCTACCTCTTCACAAGGACCAACCCAAGACCATAAAGCAAGTGAAGTTCATGAAGGTCAGAATATACAAGTCCATGAAGCCCAATCTAGTAATTCTTTGGAACTCATTTCACCCATTTTATTGGACCGTACACAATATACGGTCCAAGAAAATTTCGGCTCAGAAGGGTTGCTTGAAGATATGGTGCCATTCATGGTTAGGAACCCTACAAACAATGTAGATAGTGATGATTACTCAAAATTTTCCTTCTCCTCACACATTTCTCCTCCAGCATCCTGGACTTCTGGTTGTTCCACTTCCACTGCTTGTTATGCCGTTGGCTTAAATTCTACCATTTAA
Protein sequence

>MS.gene99619.t1

MIDSSMSKTMMEKIMSSNWSENDELLRELLVDESSLLMLPHERVTNISDDSSKDQPFNNFISNIYSGPTISDIENALLVTNHSNQFQQFSSTRVSILERSLSKIENKYTLKIKCFGNGLGDDGYRWRKYGQKSIKNSPNPRSYYRCTNPRCGAKKQVERSNEDPDTLIITYEGLHLHFAYPYFIVGQSHQSHSHPPMKKSKATSSQGPTQDHKASEVHEGQNIQVHEAQSSNSLELISPILLDRTQYTVQENFGSEGLLEDMVPFMVRNPTNNVDSDDYSKFSFSSHISPPASWTSGCSTSTACYAVGLNSTI