Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene99689.t1 | XP_003614027.2 | 80.2 | 278 | 35 | 1 | 91 | 348 | 1 | 278 | 6.30E-107 | 397.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene99689.t1 | Q9C983 | 56.2 | 160 | 53 | 5 | 187 | 342 | 140 | 286 | 6.3e-39 | 162.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene99689.t1 | G7JXY4 | 80.2 | 278 | 35 | 1 | 91 | 348 | 1 | 278 | 4.6e-107 | 397.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene99689.t1 | TF | WRKY |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene99689.t1 | MTR_5g043880 | 85.612 | 278 | 20 | 1 | 91 | 348 | 1 | 278 | 5.39e-159 | 446 |
MS.gene99689.t1 | MTR_1g086790 | 40.741 | 189 | 90 | 4 | 173 | 340 | 134 | 321 | 6.68e-35 | 130 |
MS.gene99689.t1 | MTR_5g091390 | 80.597 | 67 | 13 | 0 | 185 | 251 | 148 | 214 | 1.08e-33 | 126 |
MS.gene99689.t1 | MTR_4g094588 | 47.701 | 174 | 76 | 5 | 185 | 347 | 169 | 338 | 1.78e-33 | 127 |
MS.gene99689.t1 | MTR_7g109800 | 43.455 | 191 | 66 | 7 | 174 | 340 | 119 | 291 | 1.66e-32 | 123 |
MS.gene99689.t1 | MTR_2g033820 | 55.046 | 109 | 45 | 2 | 180 | 284 | 186 | 294 | 1.58e-30 | 119 |
MS.gene99689.t1 | MTR_4g122530 | 62.069 | 87 | 30 | 1 | 187 | 270 | 201 | 287 | 1.39e-28 | 115 |
MS.gene99689.t1 | MTR_3g095080 | 71.429 | 63 | 18 | 0 | 188 | 250 | 162 | 224 | 1.26e-25 | 103 |
MS.gene99689.t1 | MTR_3g095080 | 71.429 | 63 | 18 | 0 | 188 | 250 | 138 | 200 | 1.57e-25 | 102 |
MS.gene99689.t1 | MTR_8g092140 | 67.164 | 67 | 22 | 0 | 184 | 250 | 150 | 216 | 2.14e-25 | 102 |
MS.gene99689.t1 | MTR_7g028415 | 67.188 | 64 | 21 | 0 | 187 | 250 | 86 | 149 | 2.96e-25 | 100 |
MS.gene99689.t1 | MTR_7g028710 | 67.188 | 64 | 21 | 0 | 187 | 250 | 86 | 149 | 2.96e-25 | 100 |
MS.gene99689.t1 | MTR_3g104750 | 60.256 | 78 | 31 | 0 | 173 | 250 | 83 | 160 | 8.54e-25 | 99.0 |
MS.gene99689.t1 | MTR_7g079010 | 39.355 | 155 | 74 | 3 | 102 | 250 | 57 | 197 | 3.54e-24 | 99.0 |
MS.gene99689.t1 | MTR_8g007270 | 59.524 | 84 | 28 | 1 | 173 | 250 | 127 | 210 | 4.93e-24 | 99.0 |
MS.gene99689.t1 | MTR_7g011820 | 46.400 | 125 | 61 | 2 | 161 | 285 | 377 | 495 | 8.10e-24 | 102 |
MS.gene99689.t1 | MTR_7g011820 | 59.649 | 57 | 22 | 1 | 194 | 250 | 228 | 283 | 3.19e-15 | 77.0 |
MS.gene99689.t1 | MTR_7g062220 | 39.873 | 158 | 78 | 4 | 194 | 342 | 124 | 273 | 5.60e-23 | 97.8 |
MS.gene99689.t1 | MTR_5g042920 | 66.667 | 63 | 21 | 0 | 188 | 250 | 314 | 376 | 9.76e-23 | 99.0 |
MS.gene99689.t1 | MTR_5g042920 | 59.649 | 57 | 22 | 1 | 194 | 250 | 151 | 206 | 4.46e-15 | 76.3 |
MS.gene99689.t1 | MTR_1g015140 | 42.105 | 133 | 69 | 3 | 119 | 250 | 33 | 158 | 1.56e-22 | 92.8 |
MS.gene99689.t1 | MTR_3g056100 | 66.667 | 63 | 21 | 0 | 188 | 250 | 252 | 314 | 2.08e-22 | 97.8 |
MS.gene99689.t1 | MTR_3g056100 | 59.649 | 57 | 22 | 1 | 194 | 250 | 99 | 154 | 1.35e-14 | 74.7 |
MS.gene99689.t1 | MTR_3g056100 | 66.667 | 63 | 21 | 0 | 188 | 250 | 396 | 458 | 2.11e-22 | 98.6 |
MS.gene99689.t1 | MTR_3g056100 | 59.649 | 57 | 22 | 1 | 194 | 250 | 243 | 298 | 1.18e-14 | 75.5 |
MS.gene99689.t1 | MTR_3g056100 | 66.667 | 63 | 21 | 0 | 188 | 250 | 409 | 471 | 2.27e-22 | 98.6 |
MS.gene99689.t1 | MTR_3g056100 | 59.649 | 57 | 22 | 1 | 194 | 250 | 243 | 298 | 1.21e-14 | 75.5 |
MS.gene99689.t1 | MTR_5g094430 | 65.079 | 63 | 22 | 0 | 188 | 250 | 224 | 286 | 2.39e-22 | 97.4 |
MS.gene99689.t1 | MTR_5g094430 | 62.500 | 56 | 20 | 1 | 195 | 250 | 67 | 121 | 5.79e-15 | 75.9 |
MS.gene99689.t1 | MTR_3g056100 | 66.667 | 63 | 21 | 0 | 188 | 250 | 265 | 327 | 2.41e-22 | 97.8 |
MS.gene99689.t1 | MTR_3g056100 | 59.649 | 57 | 22 | 1 | 194 | 250 | 99 | 154 | 1.35e-14 | 74.7 |
MS.gene99689.t1 | MTR_5g094430 | 56.627 | 83 | 32 | 2 | 188 | 267 | 358 | 439 | 2.69e-22 | 98.2 |
MS.gene99689.t1 | MTR_5g094430 | 62.500 | 56 | 20 | 1 | 195 | 250 | 201 | 255 | 6.32e-15 | 76.3 |
MS.gene99689.t1 | MTR_5g094430 | 65.079 | 63 | 22 | 0 | 188 | 250 | 246 | 308 | 2.87e-22 | 97.4 |
MS.gene99689.t1 | MTR_5g094430 | 62.500 | 56 | 20 | 1 | 195 | 250 | 89 | 143 | 5.88e-15 | 75.9 |
MS.gene99689.t1 | MTR_3g009470 | 68.254 | 63 | 20 | 0 | 188 | 250 | 489 | 551 | 3.88e-22 | 98.2 |
MS.gene99689.t1 | MTR_3g009470 | 64.912 | 57 | 19 | 1 | 194 | 250 | 280 | 335 | 2.80e-17 | 83.6 |
MS.gene99689.t1 | MTR_4g082580 | 65.079 | 63 | 22 | 0 | 188 | 250 | 272 | 334 | 8.98e-22 | 95.5 |
MS.gene99689.t1 | MTR_4g082580 | 45.455 | 77 | 39 | 1 | 194 | 270 | 145 | 218 | 4.99e-15 | 75.9 |
MS.gene99689.t1 | MTR_3g095040 | 54.545 | 66 | 30 | 0 | 187 | 252 | 111 | 176 | 2.07e-21 | 91.3 |
MS.gene99689.t1 | MTR_8g096730 | 54.688 | 64 | 29 | 0 | 187 | 250 | 63 | 126 | 4.55e-21 | 88.6 |
MS.gene99689.t1 | MTR_3g031220 | 63.492 | 63 | 23 | 0 | 188 | 250 | 359 | 421 | 1.56e-20 | 92.8 |
MS.gene99689.t1 | MTR_3g031220 | 56.140 | 57 | 24 | 1 | 194 | 250 | 198 | 253 | 1.77e-12 | 68.6 |
MS.gene99689.t1 | MTR_7g080000 | 59.375 | 64 | 26 | 0 | 187 | 250 | 425 | 488 | 7.72e-20 | 91.3 |
MS.gene99689.t1 | MTR_7g080000 | 53.623 | 69 | 31 | 1 | 193 | 261 | 233 | 300 | 1.81e-16 | 80.9 |
MS.gene99689.t1 | MTR_7g080020 | 59.375 | 64 | 26 | 0 | 187 | 250 | 486 | 549 | 8.40e-20 | 91.3 |
MS.gene99689.t1 | MTR_7g080020 | 64.912 | 57 | 19 | 1 | 194 | 250 | 280 | 335 | 3.52e-17 | 83.2 |
MS.gene99689.t1 | MTR_7g100510 | 51.136 | 88 | 38 | 2 | 168 | 250 | 330 | 417 | 1.09e-19 | 90.1 |
MS.gene99689.t1 | MTR_7g100510 | 60.714 | 56 | 21 | 1 | 195 | 250 | 190 | 244 | 1.69e-14 | 74.7 |
MS.gene99689.t1 | MTR_4g013260 | 63.492 | 63 | 23 | 0 | 188 | 250 | 330 | 392 | 1.18e-19 | 90.1 |
MS.gene99689.t1 | MTR_4g013260 | 59.649 | 57 | 23 | 0 | 194 | 250 | 184 | 240 | 4.03e-16 | 79.7 |
MS.gene99689.t1 | MTR_5g074400 | 61.905 | 63 | 24 | 0 | 188 | 250 | 414 | 476 | 1.60e-19 | 90.1 |
MS.gene99689.t1 | MTR_5g074400 | 57.895 | 57 | 23 | 1 | 194 | 250 | 243 | 298 | 9.75e-13 | 69.3 |
MS.gene99689.t1 | MTR_8g092010 | 56.250 | 64 | 28 | 0 | 187 | 250 | 101 | 164 | 2.88e-19 | 84.7 |
MS.gene99689.t1 | MTR_1g077780 | 48.837 | 86 | 43 | 1 | 185 | 269 | 53 | 138 | 5.75e-19 | 82.8 |
MS.gene99689.t1 | MTR_5g097490 | 61.905 | 63 | 24 | 0 | 188 | 250 | 246 | 308 | 7.79e-19 | 87.0 |
MS.gene99689.t1 | MTR_5g097490 | 45.783 | 83 | 40 | 3 | 168 | 250 | 70 | 147 | 3.67e-12 | 67.4 |
MS.gene99689.t1 | MTR_6g086555 | 29.245 | 212 | 123 | 8 | 49 | 256 | 78 | 266 | 1.02e-18 | 87.0 |
MS.gene99689.t1 | MTR_7g071120 | 60.317 | 63 | 25 | 0 | 188 | 250 | 318 | 380 | 3.65e-18 | 85.9 |
MS.gene99689.t1 | MTR_7g071120 | 59.649 | 57 | 22 | 1 | 194 | 250 | 166 | 221 | 2.78e-14 | 73.9 |
MS.gene99689.t1 | MTR_3g009470 | 64.912 | 57 | 19 | 1 | 194 | 250 | 280 | 335 | 3.12e-17 | 83.2 |
MS.gene99689.t1 | MTR_2g105060 | 52.542 | 59 | 27 | 1 | 193 | 250 | 93 | 151 | 4.99e-17 | 79.7 |
MS.gene99689.t1 | MTR_2g088000 | 55.385 | 65 | 28 | 1 | 187 | 250 | 342 | 406 | 5.08e-17 | 82.4 |
MS.gene99689.t1 | MTR_3g053330 | 43.820 | 89 | 44 | 2 | 163 | 250 | 225 | 308 | 5.60e-17 | 82.0 |
MS.gene99689.t1 | MTR_2g105060 | 52.542 | 59 | 27 | 1 | 193 | 250 | 168 | 226 | 7.19e-17 | 80.5 |
MS.gene99689.t1 | MTR_1g013760 | 53.333 | 60 | 27 | 1 | 192 | 250 | 138 | 197 | 1.09e-16 | 79.7 |
MS.gene99689.t1 | MTR_4g132430 | 53.846 | 65 | 29 | 1 | 187 | 250 | 120 | 184 | 1.66e-16 | 80.1 |
MS.gene99689.t1 | MTR_7g110720 | 55.385 | 65 | 28 | 1 | 187 | 250 | 182 | 246 | 2.65e-16 | 79.7 |
MS.gene99689.t1 | MTR_7g110720 | 55.385 | 65 | 28 | 1 | 187 | 250 | 209 | 273 | 2.95e-16 | 79.7 |
MS.gene99689.t1 | MTR_2g023930 | 53.846 | 65 | 29 | 1 | 187 | 250 | 298 | 362 | 3.40e-16 | 80.1 |
MS.gene99689.t1 | MTR_2g016770 | 52.308 | 65 | 29 | 2 | 195 | 258 | 36 | 99 | 3.46e-16 | 77.0 |
MS.gene99689.t1 | MTR_2g016770 | 52.308 | 65 | 29 | 2 | 195 | 258 | 28 | 91 | 3.63e-16 | 76.6 |
MS.gene99689.t1 | MTR_4g132430 | 53.846 | 65 | 29 | 1 | 187 | 250 | 254 | 318 | 4.70e-16 | 79.3 |
MS.gene99689.t1 | MTR_1g009613 | 49.275 | 69 | 34 | 1 | 183 | 250 | 251 | 319 | 5.74e-16 | 78.2 |
MS.gene99689.t1 | MTR_4g127040 | 42.683 | 82 | 46 | 1 | 183 | 263 | 234 | 315 | 9.79e-16 | 77.4 |
MS.gene99689.t1 | MTR_3g106060 | 50.000 | 60 | 29 | 1 | 192 | 250 | 136 | 195 | 1.11e-15 | 77.0 |
MS.gene99689.t1 | MTR_8g098945 | 54.237 | 59 | 26 | 1 | 193 | 250 | 128 | 186 | 1.39e-15 | 76.3 |
MS.gene99689.t1 | MTR_1g078260 | 50.000 | 68 | 33 | 1 | 187 | 253 | 240 | 307 | 1.72e-15 | 77.8 |
MS.gene99689.t1 | MTR_5g067680 | 52.174 | 69 | 29 | 2 | 194 | 258 | 202 | 270 | 1.99e-15 | 77.0 |
MS.gene99689.t1 | MTR_4g130900 | 49.383 | 81 | 38 | 1 | 175 | 252 | 337 | 417 | 4.36e-15 | 76.6 |
MS.gene99689.t1 | MTR_0117s0040 | 46.053 | 76 | 40 | 1 | 180 | 254 | 60 | 135 | 8.84e-15 | 73.6 |
MS.gene99689.t1 | MTR_8g028565 | 54.386 | 57 | 25 | 1 | 195 | 250 | 156 | 212 | 9.66e-15 | 74.7 |
MS.gene99689.t1 | MTR_8g087000 | 54.386 | 57 | 25 | 1 | 195 | 250 | 78 | 134 | 1.14e-14 | 73.2 |
MS.gene99689.t1 | MTR_8g087000 | 54.386 | 57 | 25 | 1 | 195 | 250 | 77 | 133 | 1.24e-14 | 73.2 |
MS.gene99689.t1 | MTR_4g049760 | 38.393 | 112 | 63 | 2 | 140 | 250 | 241 | 347 | 2.02e-14 | 74.7 |
MS.gene99689.t1 | MTR_2g083870 | 50.769 | 65 | 30 | 2 | 195 | 258 | 81 | 144 | 2.07e-14 | 72.8 |
MS.gene99689.t1 | MTR_4g107970 | 55.932 | 59 | 25 | 1 | 193 | 250 | 177 | 235 | 2.22e-14 | 74.3 |
MS.gene99689.t1 | MTR_2g045360 | 46.970 | 66 | 34 | 1 | 187 | 251 | 204 | 269 | 2.41e-14 | 73.9 |
MS.gene99689.t1 | MTR_7g117200 | 50.000 | 68 | 30 | 2 | 193 | 256 | 117 | 184 | 2.66e-14 | 73.2 |
MS.gene99689.t1 | MTR_2g032030 | 52.632 | 57 | 26 | 1 | 195 | 250 | 268 | 324 | 2.90e-14 | 73.9 |
MS.gene99689.t1 | MTR_4g107970 | 55.932 | 59 | 25 | 1 | 193 | 250 | 254 | 312 | 3.04e-14 | 74.3 |
MS.gene99689.t1 | MTR_1g013790 | 43.056 | 72 | 37 | 2 | 186 | 256 | 93 | 161 | 3.15e-14 | 72.0 |
MS.gene99689.t1 | MTR_2g032030 | 52.632 | 57 | 26 | 1 | 195 | 250 | 268 | 324 | 3.35e-14 | 73.9 |
MS.gene99689.t1 | MTR_3g108960 | 48.571 | 70 | 35 | 1 | 183 | 251 | 303 | 372 | 3.68e-14 | 73.6 |
MS.gene99689.t1 | MTR_4g049790 | 50.769 | 65 | 31 | 1 | 187 | 250 | 305 | 369 | 5.02e-14 | 73.6 |
MS.gene99689.t1 | MTR_5g016610 | 52.632 | 57 | 26 | 1 | 195 | 250 | 200 | 256 | 5.28e-14 | 71.6 |
MS.gene99689.t1 | MTR_4g007060 | 47.458 | 59 | 30 | 1 | 193 | 250 | 127 | 185 | 5.34e-14 | 71.6 |
MS.gene99689.t1 | MTR_1g070455 | 45.946 | 74 | 39 | 1 | 181 | 253 | 280 | 353 | 5.67e-14 | 72.4 |
MS.gene99689.t1 | MTR_8g099350 | 56.897 | 58 | 22 | 1 | 194 | 248 | 132 | 189 | 5.71e-14 | 72.4 |
MS.gene99689.t1 | MTR_3g090860 | 54.237 | 59 | 24 | 1 | 193 | 248 | 132 | 190 | 5.75e-14 | 72.4 |
MS.gene99689.t1 | MTR_7g079040 | 54.386 | 57 | 25 | 1 | 195 | 250 | 155 | 211 | 7.32e-14 | 72.0 |
MS.gene99689.t1 | MTR_7g009730 | 54.237 | 59 | 26 | 1 | 193 | 250 | 218 | 276 | 7.39e-14 | 72.8 |
MS.gene99689.t1 | MTR_4g007060 | 47.458 | 59 | 30 | 1 | 193 | 250 | 161 | 219 | 7.59e-14 | 71.6 |
MS.gene99689.t1 | MTR_4g094412 | 50.769 | 65 | 31 | 1 | 187 | 250 | 227 | 291 | 1.03e-13 | 72.4 |
MS.gene99689.t1 | MTR_4g094412 | 50.769 | 65 | 31 | 1 | 187 | 250 | 236 | 300 | 1.23e-13 | 72.0 |
MS.gene99689.t1 | MTR_4g094908 | 41.250 | 80 | 46 | 1 | 183 | 261 | 255 | 334 | 1.29e-13 | 71.2 |
MS.gene99689.t1 | MTR_7g109600 | 52.632 | 57 | 26 | 1 | 195 | 250 | 54 | 110 | 2.49e-13 | 69.7 |
MS.gene99689.t1 | MTR_7g073430 | 30.201 | 149 | 91 | 3 | 112 | 248 | 32 | 179 | 2.65e-13 | 69.7 |
MS.gene99689.t1 | MTR_2g075610 | 49.153 | 59 | 27 | 1 | 193 | 248 | 28 | 86 | 3.30e-13 | 67.8 |
MS.gene99689.t1 | MTR_2g075750 | 49.153 | 59 | 27 | 1 | 193 | 248 | 27 | 85 | 3.69e-13 | 67.4 |
MS.gene99689.t1 | MTR_1g099600 | 52.632 | 57 | 26 | 1 | 195 | 250 | 186 | 242 | 4.71e-13 | 69.3 |
MS.gene99689.t1 | MTR_5g097500 | 53.448 | 58 | 27 | 0 | 193 | 250 | 229 | 286 | 6.91e-13 | 68.9 |
MS.gene99689.t1 | MTR_3g031220 | 56.140 | 57 | 24 | 1 | 194 | 250 | 198 | 253 | 9.90e-13 | 68.9 |
MS.gene99689.t1 | MTR_7g073380 | 43.421 | 76 | 37 | 2 | 193 | 265 | 122 | 194 | 1.70e-12 | 67.4 |
MS.gene99689.t1 | MTR_8g027860 | 49.153 | 59 | 27 | 1 | 193 | 248 | 135 | 193 | 1.80e-12 | 67.8 |
MS.gene99689.t1 | MTR_5g067700 | 35.185 | 108 | 55 | 5 | 195 | 291 | 107 | 210 | 2.04e-12 | 66.6 |
MS.gene99689.t1 | MTR_2g075700 | 38.043 | 92 | 48 | 3 | 193 | 276 | 143 | 233 | 3.64e-12 | 66.6 |
MS.gene99689.t1 | MTR_8g032510 | 41.111 | 90 | 43 | 4 | 194 | 276 | 119 | 205 | 1.30e-11 | 64.7 |
MS.gene99689.t1 | MTR_2g075680 | 36.000 | 100 | 58 | 2 | 172 | 268 | 126 | 222 | 2.39e-11 | 64.3 |
MS.gene99689.t1 | MTR_2g024380 | 40.580 | 69 | 40 | 1 | 194 | 261 | 251 | 319 | 2.89e-11 | 64.7 |
MS.gene99689.t1 | MTR_2g024350 | 48.276 | 58 | 29 | 1 | 194 | 250 | 8 | 65 | 3.71e-11 | 62.8 |
MS.gene99689.t1 | MTR_8g005750 | 46.552 | 58 | 28 | 1 | 194 | 248 | 103 | 160 | 6.37e-11 | 62.8 |
MS.gene99689.t1 | MTR_3g093830 | 36.782 | 87 | 51 | 2 | 195 | 277 | 128 | 214 | 7.45e-11 | 62.8 |
MS.gene99689.t1 | MTR_0002s1250 | 40.299 | 67 | 36 | 2 | 194 | 256 | 111 | 177 | 8.00e-11 | 62.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene99689.t1 | AT1G69310 | 40.678 | 295 | 121 | 7 | 88 | 342 | 6 | 286 | 5.35e-50 | 169 |
MS.gene99689.t1 | AT1G69310 | 40.678 | 295 | 121 | 7 | 88 | 342 | 6 | 286 | 5.35e-50 | 169 |
MS.gene99689.t1 | AT1G69310 | 40.678 | 295 | 121 | 7 | 88 | 342 | 6 | 286 | 5.35e-50 | 169 |
MS.gene99689.t1 | AT1G69310 | 47.393 | 211 | 68 | 6 | 158 | 342 | 89 | 282 | 2.33e-44 | 154 |
MS.gene99689.t1 | AT4G18170 | 71.605 | 81 | 20 | 1 | 173 | 250 | 148 | 228 | 8.86e-34 | 127 |
MS.gene99689.t1 | AT1G29860 | 44.304 | 158 | 73 | 4 | 185 | 337 | 127 | 274 | 3.32e-32 | 122 |
MS.gene99689.t1 | AT5G46350 | 82.812 | 64 | 11 | 0 | 187 | 250 | 176 | 239 | 4.47e-32 | 122 |
MS.gene99689.t1 | AT2G47260 | 80.303 | 66 | 13 | 0 | 185 | 250 | 165 | 230 | 1.28e-31 | 122 |
MS.gene99689.t1 | AT5G49520 | 54.369 | 103 | 40 | 1 | 185 | 280 | 212 | 314 | 2.33e-29 | 117 |
MS.gene99689.t1 | AT3G62340 | 72.727 | 66 | 18 | 0 | 185 | 250 | 109 | 174 | 7.52e-27 | 107 |
MS.gene99689.t1 | AT4G39410 | 55.914 | 93 | 36 | 1 | 188 | 280 | 217 | 304 | 2.11e-26 | 107 |
MS.gene99689.t1 | AT2G44745 | 55.670 | 97 | 39 | 2 | 158 | 250 | 105 | 201 | 1.74e-25 | 102 |
MS.gene99689.t1 | AT5G13080 | 67.188 | 64 | 21 | 0 | 187 | 250 | 60 | 123 | 1.72e-24 | 97.8 |
MS.gene99689.t1 | AT1G64000 | 55.844 | 77 | 34 | 0 | 174 | 250 | 94 | 170 | 1.53e-23 | 96.7 |
MS.gene99689.t1 | AT2G46130 | 65.625 | 64 | 22 | 0 | 187 | 250 | 23 | 86 | 3.03e-23 | 93.2 |
MS.gene99689.t1 | AT3G01970 | 64.062 | 64 | 23 | 0 | 187 | 250 | 58 | 121 | 3.12e-23 | 94.4 |
MS.gene99689.t1 | AT5G26170 | 59.701 | 67 | 27 | 0 | 187 | 253 | 106 | 172 | 4.17e-23 | 94.7 |
MS.gene99689.t1 | AT5G07100 | 40.157 | 127 | 73 | 2 | 137 | 261 | 82 | 207 | 7.19e-23 | 95.5 |
MS.gene99689.t1 | AT5G07100 | 42.500 | 80 | 42 | 1 | 194 | 269 | 24 | 103 | 3.57e-12 | 65.5 |
MS.gene99689.t1 | AT5G07100 | 40.157 | 127 | 73 | 2 | 137 | 261 | 82 | 207 | 7.19e-23 | 95.5 |
MS.gene99689.t1 | AT5G07100 | 42.500 | 80 | 42 | 1 | 194 | 269 | 24 | 103 | 3.57e-12 | 65.5 |
MS.gene99689.t1 | AT5G07100 | 40.157 | 127 | 73 | 2 | 137 | 261 | 82 | 207 | 7.19e-23 | 95.5 |
MS.gene99689.t1 | AT5G07100 | 42.500 | 80 | 42 | 1 | 194 | 269 | 24 | 103 | 3.57e-12 | 65.5 |
MS.gene99689.t1 | AT5G07100 | 40.157 | 127 | 73 | 2 | 137 | 261 | 82 | 207 | 7.19e-23 | 95.5 |
MS.gene99689.t1 | AT5G07100 | 42.500 | 80 | 42 | 1 | 194 | 269 | 24 | 103 | 3.57e-12 | 65.5 |
MS.gene99689.t1 | AT5G41570 | 42.969 | 128 | 66 | 3 | 126 | 250 | 31 | 154 | 1.01e-22 | 94.0 |
MS.gene99689.t1 | AT1G13960 | 65.079 | 63 | 22 | 0 | 188 | 250 | 403 | 465 | 1.97e-22 | 98.6 |
MS.gene99689.t1 | AT1G13960 | 63.158 | 57 | 20 | 1 | 194 | 250 | 229 | 284 | 1.28e-16 | 81.3 |
MS.gene99689.t1 | AT5G07100 | 40.157 | 127 | 73 | 2 | 137 | 261 | 175 | 300 | 2.41e-22 | 95.9 |
MS.gene99689.t1 | AT5G07100 | 42.500 | 80 | 42 | 1 | 194 | 269 | 117 | 196 | 4.12e-12 | 66.6 |
MS.gene99689.t1 | AT1G13960 | 65.079 | 63 | 22 | 0 | 188 | 250 | 250 | 312 | 2.51e-22 | 96.7 |
MS.gene99689.t1 | AT1G13960 | 63.158 | 57 | 20 | 1 | 194 | 250 | 76 | 131 | 2.07e-16 | 79.7 |
MS.gene99689.t1 | AT2G37260 | 58.824 | 68 | 28 | 0 | 189 | 256 | 262 | 329 | 3.37e-22 | 96.3 |
MS.gene99689.t1 | AT2G37260 | 53.333 | 75 | 32 | 2 | 195 | 267 | 84 | 157 | 1.72e-14 | 73.9 |
MS.gene99689.t1 | AT2G37260 | 58.824 | 68 | 28 | 0 | 189 | 256 | 264 | 331 | 3.39e-22 | 96.3 |
MS.gene99689.t1 | AT2G37260 | 34.146 | 164 | 97 | 4 | 110 | 267 | 1 | 159 | 9.17e-15 | 74.7 |
MS.gene99689.t1 | AT2G03340 | 65.079 | 63 | 22 | 0 | 188 | 250 | 409 | 471 | 4.77e-22 | 97.4 |
MS.gene99689.t1 | AT2G03340 | 61.404 | 57 | 21 | 1 | 194 | 250 | 250 | 305 | 1.30e-15 | 78.2 |
MS.gene99689.t1 | AT2G37260 | 58.824 | 68 | 28 | 0 | 189 | 256 | 344 | 411 | 5.40e-22 | 96.7 |
MS.gene99689.t1 | AT2G37260 | 32.673 | 202 | 122 | 6 | 72 | 267 | 46 | 239 | 6.87e-16 | 78.6 |
MS.gene99689.t1 | AT3G01080 | 67.188 | 64 | 21 | 0 | 187 | 250 | 337 | 400 | 5.70e-22 | 97.1 |
MS.gene99689.t1 | AT3G01080 | 57.895 | 57 | 23 | 1 | 194 | 250 | 205 | 260 | 1.09e-14 | 75.1 |
MS.gene99689.t1 | AT3G01080 | 67.188 | 64 | 21 | 0 | 187 | 250 | 299 | 362 | 8.60e-22 | 95.9 |
MS.gene99689.t1 | AT3G01080 | 57.895 | 57 | 23 | 1 | 194 | 250 | 167 | 222 | 1.48e-14 | 74.7 |
MS.gene99689.t1 | AT4G26640 | 65.079 | 63 | 22 | 0 | 188 | 250 | 199 | 261 | 7.15e-21 | 92.8 |
MS.gene99689.t1 | AT4G26640 | 61.404 | 57 | 21 | 1 | 194 | 250 | 35 | 90 | 5.13e-15 | 75.9 |
MS.gene99689.t1 | AT4G26640 | 65.079 | 63 | 22 | 0 | 188 | 250 | 199 | 261 | 7.15e-21 | 92.8 |
MS.gene99689.t1 | AT4G26640 | 61.404 | 57 | 21 | 1 | 194 | 250 | 35 | 90 | 5.13e-15 | 75.9 |
MS.gene99689.t1 | AT4G26640 | 65.079 | 63 | 22 | 0 | 188 | 250 | 199 | 261 | 7.15e-21 | 92.8 |
MS.gene99689.t1 | AT4G26640 | 61.404 | 57 | 21 | 1 | 194 | 250 | 35 | 90 | 5.13e-15 | 75.9 |
MS.gene99689.t1 | AT4G26640 | 65.079 | 63 | 22 | 0 | 188 | 250 | 199 | 261 | 7.15e-21 | 92.8 |
MS.gene99689.t1 | AT4G26640 | 61.404 | 57 | 21 | 1 | 194 | 250 | 35 | 90 | 5.13e-15 | 75.9 |
MS.gene99689.t1 | AT4G26640 | 65.079 | 63 | 22 | 0 | 188 | 250 | 335 | 397 | 8.19e-21 | 94.0 |
MS.gene99689.t1 | AT4G26640 | 61.404 | 57 | 21 | 1 | 194 | 250 | 171 | 226 | 5.24e-15 | 76.3 |
MS.gene99689.t1 | AT4G26640 | 65.079 | 63 | 22 | 0 | 188 | 250 | 375 | 437 | 9.13e-21 | 93.6 |
MS.gene99689.t1 | AT4G26640 | 61.404 | 57 | 21 | 1 | 194 | 250 | 211 | 266 | 5.40e-15 | 76.3 |
MS.gene99689.t1 | AT4G26640 | 65.079 | 63 | 22 | 0 | 188 | 250 | 303 | 365 | 9.43e-21 | 93.6 |
MS.gene99689.t1 | AT4G26640 | 61.404 | 57 | 21 | 1 | 194 | 250 | 139 | 194 | 5.41e-15 | 76.3 |
MS.gene99689.t1 | AT5G43290 | 32.124 | 193 | 104 | 4 | 165 | 342 | 83 | 263 | 1.01e-20 | 90.9 |
MS.gene99689.t1 | AT5G64810 | 52.239 | 67 | 32 | 0 | 187 | 253 | 103 | 169 | 2.45e-20 | 87.8 |
MS.gene99689.t1 | AT2G04880 | 56.164 | 73 | 29 | 1 | 191 | 263 | 280 | 349 | 3.50e-20 | 91.7 |
MS.gene99689.t1 | AT2G04880 | 56.897 | 58 | 24 | 1 | 193 | 250 | 110 | 166 | 6.72e-14 | 72.8 |
MS.gene99689.t1 | AT2G04880 | 56.164 | 73 | 29 | 1 | 191 | 263 | 304 | 373 | 4.16e-20 | 91.7 |
MS.gene99689.t1 | AT2G04880 | 56.897 | 58 | 24 | 1 | 193 | 250 | 110 | 166 | 6.94e-14 | 72.8 |
MS.gene99689.t1 | AT5G56270 | 65.079 | 63 | 22 | 0 | 188 | 250 | 481 | 543 | 4.66e-20 | 92.0 |
MS.gene99689.t1 | AT5G56270 | 63.158 | 57 | 20 | 1 | 194 | 250 | 273 | 328 | 4.90e-16 | 79.7 |
MS.gene99689.t1 | AT2G38470 | 61.905 | 63 | 24 | 0 | 188 | 250 | 356 | 418 | 4.14e-19 | 88.6 |
MS.gene99689.t1 | AT2G38470 | 47.253 | 91 | 41 | 2 | 160 | 250 | 156 | 239 | 2.91e-13 | 71.2 |
MS.gene99689.t1 | AT2G30250 | 61.905 | 63 | 24 | 0 | 188 | 250 | 322 | 384 | 4.33e-19 | 87.8 |
MS.gene99689.t1 | AT4G26440 | 60.317 | 63 | 25 | 0 | 188 | 250 | 366 | 428 | 8.69e-19 | 87.8 |
MS.gene99689.t1 | AT4G26440 | 54.321 | 81 | 26 | 4 | 194 | 270 | 178 | 251 | 4.48e-15 | 76.6 |
MS.gene99689.t1 | AT1G55600 | 56.250 | 64 | 28 | 0 | 187 | 250 | 300 | 363 | 2.21e-18 | 86.3 |
MS.gene99689.t1 | AT2G46130 | 59.375 | 64 | 22 | 1 | 187 | 250 | 23 | 82 | 5.47e-18 | 79.0 |
MS.gene99689.t1 | AT2G21900 | 49.254 | 67 | 31 | 1 | 187 | 250 | 99 | 165 | 1.49e-17 | 80.5 |
MS.gene99689.t1 | AT4G04450 | 41.509 | 106 | 56 | 2 | 146 | 250 | 155 | 255 | 6.63e-17 | 81.6 |
MS.gene99689.t1 | AT2G25000 | 54.237 | 59 | 26 | 1 | 193 | 250 | 102 | 160 | 6.91e-17 | 79.3 |
MS.gene99689.t1 | AT2G25000 | 54.237 | 59 | 26 | 1 | 193 | 250 | 102 | 160 | 6.91e-17 | 79.3 |
MS.gene99689.t1 | AT2G25000 | 54.237 | 59 | 26 | 1 | 193 | 250 | 124 | 182 | 1.05e-16 | 79.0 |
MS.gene99689.t1 | AT2G25000 | 54.237 | 59 | 26 | 1 | 193 | 250 | 145 | 203 | 1.32e-16 | 79.3 |
MS.gene99689.t1 | AT4G04450 | 41.509 | 106 | 56 | 2 | 146 | 250 | 249 | 349 | 1.60e-16 | 80.9 |
MS.gene99689.t1 | AT4G31800 | 50.847 | 59 | 28 | 1 | 193 | 250 | 110 | 168 | 3.65e-16 | 77.4 |
MS.gene99689.t1 | AT4G31800 | 50.847 | 59 | 28 | 1 | 193 | 250 | 175 | 233 | 5.82e-16 | 77.8 |
MS.gene99689.t1 | AT4G22070 | 53.846 | 65 | 29 | 1 | 187 | 250 | 290 | 354 | 8.46e-16 | 79.0 |
MS.gene99689.t1 | AT4G22070 | 53.846 | 65 | 29 | 1 | 187 | 250 | 290 | 354 | 8.46e-16 | 79.0 |
MS.gene99689.t1 | AT4G22070 | 53.846 | 65 | 29 | 1 | 187 | 250 | 290 | 354 | 8.46e-16 | 79.0 |
MS.gene99689.t1 | AT4G22070 | 53.846 | 65 | 29 | 1 | 187 | 250 | 290 | 354 | 8.46e-16 | 79.0 |
MS.gene99689.t1 | AT1G62300 | 53.846 | 65 | 29 | 1 | 187 | 250 | 305 | 369 | 1.29e-15 | 78.2 |
MS.gene99689.t1 | AT5G52830 | 50.000 | 76 | 29 | 3 | 195 | 269 | 166 | 233 | 1.43e-15 | 77.4 |
MS.gene99689.t1 | AT4G01250 | 43.750 | 96 | 47 | 2 | 162 | 250 | 90 | 185 | 1.84e-15 | 76.3 |
MS.gene99689.t1 | AT1G29280 | 38.655 | 119 | 58 | 4 | 143 | 250 | 17 | 131 | 2.68e-15 | 75.1 |
MS.gene99689.t1 | AT1G80840 | 49.153 | 59 | 29 | 1 | 193 | 250 | 145 | 203 | 2.96e-15 | 75.9 |
MS.gene99689.t1 | AT3G01080 | 57.895 | 57 | 23 | 1 | 194 | 250 | 205 | 260 | 3.86e-15 | 75.9 |
MS.gene99689.t1 | AT1G69810 | 32.450 | 151 | 88 | 5 | 109 | 250 | 58 | 203 | 4.27e-15 | 75.5 |
MS.gene99689.t1 | AT4G30935 | 46.250 | 80 | 42 | 1 | 195 | 274 | 332 | 410 | 4.77e-15 | 76.3 |
MS.gene99689.t1 | AT1G69810 | 32.450 | 151 | 88 | 5 | 109 | 250 | 116 | 261 | 5.92e-15 | 75.9 |
MS.gene99689.t1 | AT1G30650 | 54.386 | 57 | 25 | 1 | 195 | 250 | 218 | 274 | 1.19e-14 | 75.1 |
MS.gene99689.t1 | AT4G01720 | 52.308 | 65 | 30 | 1 | 187 | 250 | 232 | 296 | 2.27e-14 | 74.3 |
MS.gene99689.t1 | AT2G24570 | 47.143 | 70 | 36 | 1 | 183 | 251 | 232 | 301 | 2.51e-14 | 73.2 |
MS.gene99689.t1 | AT2G30590 | 47.826 | 69 | 35 | 1 | 183 | 250 | 302 | 370 | 2.59e-14 | 73.9 |
MS.gene99689.t1 | AT1G68150 | 52.308 | 65 | 30 | 1 | 187 | 250 | 228 | 292 | 2.86e-14 | 73.6 |
MS.gene99689.t1 | AT4G31550 | 47.143 | 70 | 36 | 1 | 183 | 251 | 235 | 304 | 2.88e-14 | 73.2 |
MS.gene99689.t1 | AT4G31550 | 47.143 | 70 | 36 | 1 | 183 | 251 | 234 | 303 | 2.88e-14 | 73.2 |
MS.gene99689.t1 | AT2G34830 | 52.632 | 57 | 26 | 1 | 195 | 250 | 216 | 272 | 3.10e-14 | 73.9 |
MS.gene99689.t1 | AT5G15130 | 54.237 | 59 | 26 | 1 | 193 | 250 | 226 | 284 | 3.36e-14 | 73.9 |
MS.gene99689.t1 | AT5G15130 | 54.237 | 59 | 26 | 1 | 193 | 250 | 184 | 242 | 3.40e-14 | 73.9 |
MS.gene99689.t1 | AT2G34830 | 52.632 | 57 | 26 | 1 | 195 | 250 | 225 | 281 | 3.46e-14 | 73.6 |
MS.gene99689.t1 | AT1G18860 | 54.237 | 59 | 26 | 1 | 193 | 250 | 238 | 296 | 6.24e-14 | 73.2 |
MS.gene99689.t1 | AT5G45050 | 35.833 | 120 | 57 | 3 | 133 | 250 | 997 | 1098 | 1.19e-13 | 72.8 |
MS.gene99689.t1 | AT5G45050 | 35.833 | 120 | 57 | 3 | 133 | 250 | 1108 | 1209 | 1.38e-13 | 72.4 |
MS.gene99689.t1 | AT5G45050 | 35.833 | 120 | 57 | 3 | 133 | 250 | 1136 | 1237 | 1.45e-13 | 72.4 |
MS.gene99689.t1 | AT4G23550 | 49.206 | 63 | 31 | 1 | 189 | 250 | 135 | 197 | 1.55e-13 | 70.9 |
MS.gene99689.t1 | AT2G23320 | 46.377 | 69 | 36 | 1 | 183 | 250 | 229 | 297 | 2.84e-13 | 70.1 |
MS.gene99689.t1 | AT3G58710 | 47.945 | 73 | 34 | 2 | 187 | 258 | 64 | 133 | 3.25e-13 | 69.3 |
MS.gene99689.t1 | AT3G58710 | 47.945 | 73 | 34 | 2 | 187 | 258 | 63 | 132 | 3.37e-13 | 69.3 |
MS.gene99689.t1 | AT5G28650 | 42.697 | 89 | 43 | 2 | 181 | 268 | 249 | 330 | 4.89e-13 | 69.7 |
MS.gene99689.t1 | AT4G24240 | 40.000 | 105 | 61 | 2 | 151 | 253 | 237 | 341 | 5.69e-13 | 69.7 |
MS.gene99689.t1 | AT4G11070 | 38.318 | 107 | 53 | 4 | 157 | 256 | 75 | 175 | 1.27e-12 | 67.8 |
MS.gene99689.t1 | AT2G40740 | 47.619 | 63 | 29 | 2 | 194 | 252 | 173 | 235 | 1.49e-12 | 67.8 |
MS.gene99689.t1 | AT4G11070 | 38.318 | 107 | 53 | 4 | 157 | 256 | 107 | 207 | 1.70e-12 | 67.8 |
MS.gene99689.t1 | AT2G40740 | 47.619 | 63 | 29 | 2 | 194 | 252 | 182 | 244 | 1.72e-12 | 67.8 |
MS.gene99689.t1 | AT3G04670 | 41.573 | 89 | 44 | 2 | 181 | 268 | 249 | 330 | 1.86e-12 | 67.8 |
MS.gene99689.t1 | AT1G66560 | 45.312 | 64 | 32 | 1 | 194 | 254 | 103 | 166 | 2.05e-12 | 66.6 |
MS.gene99689.t1 | AT1G66600 | 46.154 | 65 | 32 | 1 | 193 | 254 | 102 | 166 | 4.62e-12 | 65.5 |
MS.gene99689.t1 | AT4G23810 | 35.593 | 118 | 63 | 4 | 143 | 253 | 110 | 221 | 4.87e-12 | 66.6 |
MS.gene99689.t1 | AT3G56400 | 41.333 | 75 | 40 | 2 | 193 | 263 | 119 | 193 | 6.05e-12 | 65.9 |
MS.gene99689.t1 | AT5G01900 | 49.123 | 57 | 26 | 1 | 195 | 248 | 111 | 167 | 8.47e-12 | 65.1 |
MS.gene99689.t1 | AT5G24110 | 46.269 | 67 | 32 | 2 | 186 | 248 | 104 | 170 | 8.59e-12 | 65.5 |
MS.gene99689.t1 | AT2G46400 | 32.692 | 104 | 62 | 2 | 163 | 258 | 68 | 171 | 1.19e-11 | 65.1 |
MS.gene99689.t1 | AT1G66550 | 49.123 | 57 | 26 | 1 | 195 | 248 | 104 | 160 | 1.62e-11 | 64.3 |
MS.gene99689.t1 | AT1G66550 | 49.123 | 57 | 26 | 1 | 195 | 248 | 109 | 165 | 1.99e-11 | 63.9 |
Find 88 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTGTCTTTGTCTTCCATACA+TGG | 0.278836 | 5.3:-31428073 | None:intergenic |
CGGCGTCAGCGTCGTCTTAC+AGG | 0.278972 | 5.3:+31428257 | MS.gene99689:CDS |
AGTTTATCCTTGGTGGTTTC+CGG | 0.298380 | 5.3:-31428190 | None:intergenic |
ATCGTCCCCAAAAGTATCTA+AGG | 0.351360 | 5.3:+31423139 | MS.gene99689:intron |
TACCCCGTGGAATGCGCAAC+AGG | 0.355074 | 5.3:+31437350 | MS.gene99689:CDS |
GTATCTAAGGGGACAATTAA+TGG | 0.357117 | 5.3:+31423152 | MS.gene99689:intron |
TATGTAGTTATAACAATTGT+TGG | 0.364884 | 5.3:-31437052 | None:intergenic |
AACTCTGCAGGTAATTGAAC+AGG | 0.390496 | 5.3:-31437184 | None:intergenic |
CATCCCTGTTGCGCATTCCA+CGG | 0.391032 | 5.3:-31437354 | None:intergenic |
GGCTACAGATGGAGGAAGTA+TGG | 0.393103 | 5.3:+31436188 | MS.gene99689:CDS |
AGTTCGTCGGCAGCTCAAAC+TGG | 0.401902 | 5.3:+31428110 | MS.gene99689:CDS |
ATCCCTGTTGCGCATTCCAC+GGG | 0.402445 | 5.3:-31437353 | None:intergenic |
TCAGTTGAACCGGTTTGAAC+CGG | 0.404754 | 5.3:-31428220 | None:intergenic |
TTGCACCACCACTGTTTCTC+AGG | 0.407420 | 5.3:+31437213 | MS.gene99689:CDS |
GCGTTGCTCTATTATTTCTT+CGG | 0.416015 | 5.3:-31423181 | None:intergenic |
TGACGGTGATGCCACTGTTC+CGG | 0.418753 | 5.3:+31420971 | MS.gene99689:CDS |
CGATGCCGTTTCAGTTGAAC+CGG | 0.425789 | 5.3:-31428230 | None:intergenic |
CTAGCCGATGAAGGACTACT+TGG | 0.427250 | 5.3:+31437319 | MS.gene99689:CDS |
GTAAATGCACGGTGAAGAAA+AGG | 0.427885 | 5.3:+31437008 | MS.gene99689:CDS |
CTTGTTGCAGGAGCTACTAT+AGG | 0.437423 | 5.3:+31436975 | MS.gene99689:intron |
TTTCACTCGTAATCCATGTA+TGG | 0.440465 | 5.3:+31428060 | MS.gene99689:CDS |
ATCGAGCAGCGCTACAATGC+CGG | 0.445819 | 5.3:+31437273 | MS.gene99689:CDS |
GGCTGATGCATCACCGCCGC+TGG | 0.448875 | 5.3:+31437294 | MS.gene99689:CDS |
TTGCAACAGTTTATCCTTGG+TGG | 0.452161 | 5.3:-31428197 | None:intergenic |
TAATAGAATTGAGGCATTGT+AGG | 0.457087 | 5.3:-31437160 | None:intergenic |
TGAGCTGCCGACGAACTCTT+CGG | 0.462792 | 5.3:-31428104 | None:intergenic |
CGGCGGTTTCTCATCGGAGA+CGG | 0.486980 | 5.3:-31428335 | None:intergenic |
GAGGCATTGTAGGAGCAAAC+TGG | 0.488963 | 5.3:-31437150 | None:intergenic |
TTTCTCCGGCAGATCCTCAC+TGG | 0.490017 | 5.3:-31428308 | None:intergenic |
CTGTTGCAACCGGTTCAAAC+CGG | 0.492008 | 5.3:+31428211 | MS.gene99689:CDS |
ATGTAGTTATAACAATTGTT+GGG | 0.492053 | 5.3:-31437051 | None:intergenic |
GTGCAAGTGTTTAACTCTGC+AGG | 0.495119 | 5.3:-31437196 | None:intergenic |
CGGTTGCAACAGTTTATCCT+TGG | 0.501026 | 5.3:-31428200 | None:intergenic |
GGGATGAGAGAAATATTTGA+TGG | 0.502837 | 5.3:+31437371 | MS.gene99689:CDS |
CAAGGATAAACTGTTGCAAC+CGG | 0.502840 | 5.3:+31428201 | MS.gene99689:CDS |
ATAGGTTCGACCACATCGGC+TGG | 0.509291 | 5.3:+31428158 | MS.gene99689:CDS |
TCGGAGACGGTGGATTTCTC+CGG | 0.513021 | 5.3:-31428322 | None:intergenic |
TGACTAATGATTCCACTTCG+AGG | 0.515148 | 5.3:-31437109 | None:intergenic |
ATTGTTATAACTACATATGA+AGG | 0.523487 | 5.3:+31437058 | MS.gene99689:CDS |
AAGCTCCAGTGAGGATCTGC+CGG | 0.524027 | 5.3:+31428303 | MS.gene99689:CDS |
CCGCTGGATCTAGCCGATGA+AGG | 0.527848 | 5.3:+31437310 | MS.gene99689:CDS |
AACTGAAACGGCATCGGTGT+CGG | 0.528007 | 5.3:+31428237 | MS.gene99689:CDS |
TCAAACCGGTTCAACTGAAA+CGG | 0.530264 | 5.3:+31428225 | MS.gene99689:CDS |
CATCATCCTCATGAGGCCGC+TGG | 0.543236 | 5.3:+31437247 | MS.gene99689:CDS |
TCGTCCCCAAAAGTATCTAA+GGG | 0.546250 | 5.3:+31423140 | MS.gene99689:intron |
GTCATCAACAACCACTGCGC+CGG | 0.548257 | 5.3:-31420990 | None:intergenic |
ATGGAGGAAGTATGGTCAGA+AGG | 0.553401 | 5.3:+31436196 | MS.gene99689:CDS |
GATCCTCCAGCGGCCTCATG+AGG | 0.556070 | 5.3:-31437253 | None:intergenic |
GCATCACCGTCATGTGCTCT+CGG | 0.559979 | 5.3:-31420960 | None:intergenic |
ATCTCCAAGTAGTCCTTCAT+CGG | 0.564084 | 5.3:-31437323 | None:intergenic |
TGAACAGGATAATAGAATTG+AGG | 0.567757 | 5.3:-31437169 | None:intergenic |
CAACATTGTCATCACACAGT+TGG | 0.575164 | 5.3:+31437082 | MS.gene99689:CDS |
GATGTGGTCGAACCTATCGC+TGG | 0.578566 | 5.3:-31428152 | None:intergenic |
ACAGTTGGATTTCCTCGAAG+TGG | 0.579381 | 5.3:+31437097 | MS.gene99689:CDS |
AGCGGCGGTGATGCATCAGC+CGG | 0.584373 | 5.3:-31437292 | None:intergenic |
TAAATGCACGGTGAAGAAAA+GGG | 0.590194 | 5.3:+31437009 | MS.gene99689:CDS |
CATCGGCTGGAATCTTGTAC+CGG | 0.594865 | 5.3:+31428171 | MS.gene99689:CDS |
CAACCACTGCGCCGGAACAG+TGG | 0.596074 | 5.3:-31420982 | None:intergenic |
ATCTTGAGGATGGCTACAGA+TGG | 0.596823 | 5.3:+31436177 | MS.gene99689:CDS |
GAAGTTGATCATCTTGAGGA+TGG | 0.599686 | 5.3:+31436167 | MS.gene99689:CDS |
TTGAGGATGGCTACAGATGG+AGG | 0.606728 | 5.3:+31436180 | MS.gene99689:CDS |
CGGTTCAACTGAAACGGCAT+CGG | 0.607214 | 5.3:+31428231 | MS.gene99689:CDS |
CTGCCGACGAACTCTTCGGT+AGG | 0.613223 | 5.3:-31428100 | None:intergenic |
ACGTTGATGATTCCAGCGAT+AGG | 0.613832 | 5.3:+31428140 | MS.gene99689:CDS |
GAGTGAAGTTGATCATCTTG+AGG | 0.617670 | 5.3:+31436163 | MS.gene99689:CDS |
CGGTTTCTCATCGGAGACGG+TGG | 0.623854 | 5.3:-31428332 | None:intergenic |
ATGCCACTGTTCCGGCGCAG+TGG | 0.624466 | 5.3:+31420979 | MS.gene99689:CDS |
CATCCTCATGAGGCCGCTGG+AGG | 0.629985 | 5.3:+31437250 | MS.gene99689:CDS |
ACCCCGTGGAATGCGCAACA+GGG | 0.634896 | 5.3:+31437351 | MS.gene99689:CDS |
AACACGCAATTGGCATAGCT+AGG | 0.642459 | 5.3:-31422771 | None:intergenic |
GTACAAGATTCCAGCCGATG+TGG | 0.646288 | 5.3:-31428168 | None:intergenic |
AAGGGTTGAACGTTCTCATG+AGG | 0.649580 | 5.3:+31437027 | MS.gene99689:CDS |
GTGCACAAATAGTAAATGCA+CGG | 0.652957 | 5.3:+31436997 | MS.gene99689:CDS |
TCAAACACATCATCCTCATG+AGG | 0.661604 | 5.3:+31437240 | MS.gene99689:CDS |
CCTTCATCGGCTAGATCCAG+CGG | 0.667147 | 5.3:-31437310 | None:intergenic |
AGCGATAGGTTCGACCACAT+CGG | 0.679999 | 5.3:+31428154 | MS.gene99689:CDS |
AGCGCTGCTCGATCCTCCAG+CGG | 0.686245 | 5.3:-31437263 | None:intergenic |
AATTTCTTCAAGCTCCAGTG+AGG | 0.687427 | 5.3:+31428294 | MS.gene99689:CDS |
TCTTGTACCGGAAACCACCA+AGG | 0.687820 | 5.3:+31428183 | MS.gene99689:CDS |
GCACCTACCGAAGAGTTCGT+CGG | 0.692153 | 5.3:+31428097 | MS.gene99689:CDS |
CTTGGAGATATTGTACCCCG+TGG | 0.693708 | 5.3:+31437337 | MS.gene99689:CDS |
CGTCCCCAAAAGTATCTAAG+GGG | 0.699362 | 5.3:+31423141 | MS.gene99689:intron |
TCCCTGTTGCGCATTCCACG+GGG | 0.706727 | 5.3:-31437352 | None:intergenic |
TCATCGGCTAGATCCAGCGG+CGG | 0.712483 | 5.3:-31437307 | None:intergenic |
CAACTGTGTGATGACAATGT+TGG | 0.715256 | 5.3:-31437081 | None:intergenic |
TTGACATGCCTGAGAAACAG+TGG | 0.733828 | 5.3:-31437221 | None:intergenic |
TATTTACCGAGAGCACATGA+CGG | 0.737232 | 5.3:+31420954 | MS.gene99689:CDS |
ACATGCCTGAGAAACAGTGG+TGG | 0.787622 | 5.3:-31437218 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.3 | gene | 31420933 | 31437390 | 31420933 | ID=MS.gene99689 |
chr5.3 | mRNA | 31420933 | 31437390 | 31420933 | ID=MS.gene99689.t1;Parent=MS.gene99689 |
chr5.3 | exon | 31420933 | 31421037 | 31420933 | ID=MS.gene99689.t1.exon1;Parent=MS.gene99689.t1 |
chr5.3 | CDS | 31420933 | 31421037 | 31420933 | ID=cds.MS.gene99689.t1;Parent=MS.gene99689.t1 |
chr5.3 | exon | 31422756 | 31422830 | 31422756 | ID=MS.gene99689.t1.exon2;Parent=MS.gene99689.t1 |
chr5.3 | CDS | 31422756 | 31422830 | 31422756 | ID=cds.MS.gene99689.t1;Parent=MS.gene99689.t1 |
chr5.3 | exon | 31423153 | 31423222 | 31423153 | ID=MS.gene99689.t1.exon3;Parent=MS.gene99689.t1 |
chr5.3 | CDS | 31423153 | 31423222 | 31423153 | ID=cds.MS.gene99689.t1;Parent=MS.gene99689.t1 |
chr5.3 | exon | 31428059 | 31428365 | 31428059 | ID=MS.gene99689.t1.exon4;Parent=MS.gene99689.t1 |
chr5.3 | CDS | 31428059 | 31428365 | 31428059 | ID=cds.MS.gene99689.t1;Parent=MS.gene99689.t1 |
chr5.3 | exon | 31436160 | 31436243 | 31436160 | ID=MS.gene99689.t1.exon5;Parent=MS.gene99689.t1 |
chr5.3 | CDS | 31436160 | 31436243 | 31436160 | ID=cds.MS.gene99689.t1;Parent=MS.gene99689.t1 |
chr5.3 | exon | 31436985 | 31437390 | 31436985 | ID=MS.gene99689.t1.exon6;Parent=MS.gene99689.t1 |
chr5.3 | CDS | 31436985 | 31437390 | 31436985 | ID=cds.MS.gene99689.t1;Parent=MS.gene99689.t1 |
Gene Sequence |
Protein sequence |