AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene99984

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene99984.t1 MTR_8g062240 96.491 285 3 2 1 285 1 278 0.0 553
MS.gene99984.t1 MTR_5g037250 70.046 217 45 6 75 285 37 239 3.65e-96 283
MS.gene99984.t1 MTR_7g053410 53.659 205 73 6 84 276 234 428 1.29e-52 179
MS.gene99984.t1 MTR_7g053410 53.659 205 73 6 84 276 234 428 1.61e-52 179
MS.gene99984.t1 MTR_8g012290 63.309 139 40 3 109 239 237 372 9.57e-51 174
MS.gene99984.t1 MTR_8g012290 63.309 139 40 3 109 239 237 372 9.75e-51 174
MS.gene99984.t1 MTR_5g048860 71.930 114 30 1 134 247 343 454 2.54e-47 166
MS.gene99984.t1 MTR_8g065740 54.118 170 68 4 79 247 234 394 5.56e-47 163
MS.gene99984.t1 MTR_1g017350 38.591 298 126 10 5 257 74 359 2.58e-46 160
MS.gene99984.t1 MTR_1g017350 38.591 298 126 10 5 257 74 359 3.71e-46 160
MS.gene99984.t1 MTR_1g017350 39.085 284 116 10 5 243 74 345 7.69e-46 159
MS.gene99984.t1 MTR_1g017350 39.085 284 116 10 5 243 74 345 8.07e-46 159
MS.gene99984.t1 MTR_4g070320 55.484 155 53 2 110 251 85 236 5.06e-45 155
MS.gene99984.t1 MTR_3g116770 60.417 144 44 4 123 254 150 292 8.13e-45 156
MS.gene99984.t1 MTR_3g116770 60.417 144 44 4 123 254 150 292 8.22e-45 156
MS.gene99984.t1 MTR_8g099880 88.000 75 9 0 155 229 142 216 4.12e-40 142
MS.gene99984.t1 MTR_3g498825 82.716 81 14 0 149 229 138 218 9.41e-40 141
MS.gene99984.t1 MTR_7g092510 72.093 86 24 0 152 237 167 252 1.81e-37 135
MS.gene99984.t1 MTR_1g059270 66.667 90 30 0 155 244 157 246 2.57e-37 133
MS.gene99984.t1 MTR_1g059270 69.412 85 26 0 155 239 157 241 5.33e-36 131
MS.gene99984.t1 MTR_6g084120 45.000 140 51 4 99 238 113 226 1.99e-25 102
MS.gene99984.t1 MTR_4g131160 59.756 82 32 1 142 223 180 260 3.70e-22 95.5
MS.gene99984.t1 MTR_4g131160 59.756 82 32 1 142 223 183 263 4.03e-22 95.5
MS.gene99984.t1 MTR_1g080890 58.974 78 26 2 146 223 186 257 7.91e-20 88.2
MS.gene99984.t1 MTR_4g107320 57.692 78 25 4 176 245 60 137 4.97e-17 76.3
MS.gene99984.t1 MTR_2g098310 38.356 146 73 5 88 222 257 396 5.91e-16 77.8
MS.gene99984.t1 MTR_1g069155 47.561 82 41 2 160 241 319 398 3.38e-15 75.9
MS.gene99984.t1 MTR_2g098310 38.621 145 72 5 88 221 257 395 4.46e-15 75.1
MS.gene99984.t1 MTR_1g084980 50.000 64 31 1 160 223 464 526 5.33e-15 75.5
MS.gene99984.t1 MTR_4g065870 55.385 65 29 0 158 222 355 419 1.92e-14 73.2
MS.gene99984.t1 MTR_4g065870 54.839 62 28 0 158 219 355 416 1.21e-13 70.9
MS.gene99984.t1 MTR_1g052470 48.101 79 36 1 146 224 291 364 1.64e-13 70.5
MS.gene99984.t1 MTR_7g099540 50.000 64 31 1 160 223 254 316 3.19e-13 69.7
MS.gene99984.t1 MTR_4g033295 49.231 65 33 0 158 222 118 182 4.21e-13 67.0
MS.gene99984.t1 MTR_1g070870 60.606 66 25 1 158 223 120 184 5.91e-13 67.8
MS.gene99984.t1 MTR_7g092540 44.595 74 41 0 158 231 243 316 6.05e-13 68.2
MS.gene99984.t1 MTR_1g070870 60.606 66 25 1 158 223 123 187 6.62e-13 67.8
MS.gene99984.t1 MTR_4g033295 47.761 67 34 1 158 223 118 184 7.81e-13 65.9
MS.gene99984.t1 MTR_7g092540 48.438 64 33 0 158 221 243 306 1.40e-12 67.0
MS.gene99984.t1 MTR_1g018090 49.231 65 32 1 158 222 274 337 2.29e-12 67.0
MS.gene99984.t1 MTR_1g019240 36.364 110 50 4 115 224 61 150 4.50e-12 65.1
MS.gene99984.t1 MTR_3g103030 35.659 129 69 3 107 222 165 292 6.65e-12 65.1
MS.gene99984.t1 MTR_8g036235 47.692 65 34 0 158 222 316 380 9.84e-12 65.1
MS.gene99984.t1 MTR_5g005110 50.000 64 31 1 159 222 225 287 1.20e-11 64.7
MS.gene99984.t1 MTR_7g099540 46.875 64 33 1 160 223 254 316 1.63e-11 64.7
MS.gene99984.t1 MTR_7g111320 48.438 64 32 1 160 223 434 496 2.24e-11 64.3
MS.gene99984.t1 MTR_3g449770 46.875 64 33 1 160 223 311 373 2.96e-11 63.9
MS.gene99984.t1 MTR_2g098310 32.584 178 94 8 88 247 257 426 5.24e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene99984.t1 AT1G59640 58.362 293 85 11 1 285 1 264 6.05e-97 286
MS.gene99984.t1 AT1G59640 57.200 250 71 10 1 243 1 221 1.41e-75 234
MS.gene99984.t1 AT5G62610 51.525 295 119 12 1 285 1 281 3.39e-71 221
MS.gene99984.t1 AT5G62610 51.525 295 119 12 1 285 1 281 3.39e-71 221
MS.gene99984.t1 AT3G07340 57.500 160 46 3 84 243 206 343 8.08e-48 165
MS.gene99984.t1 AT3G07340 57.500 160 46 3 84 243 206 343 1.38e-47 165
MS.gene99984.t1 AT1G26260 56.329 158 63 2 92 248 110 262 8.86e-47 160
MS.gene99984.t1 AT1G26260 56.329 158 63 2 92 248 139 291 1.94e-46 160
MS.gene99984.t1 AT1G26260 56.329 158 63 2 92 248 161 313 3.75e-46 159
MS.gene99984.t1 AT1G26260 56.329 158 63 2 92 248 161 313 3.75e-46 159
MS.gene99984.t1 AT1G26260 56.329 158 63 2 92 248 161 313 3.75e-46 159
MS.gene99984.t1 AT1G26260 56.329 158 63 2 92 248 161 313 3.75e-46 159
MS.gene99984.t1 AT5G48560 77.451 102 19 3 143 243 289 387 6.13e-46 160
MS.gene99984.t1 AT5G48560 77.451 102 19 3 143 243 289 387 9.55e-46 161
MS.gene99984.t1 AT1G68920 52.571 175 68 3 81 246 223 391 4.89e-45 159
MS.gene99984.t1 AT1G68920 52.571 175 68 3 81 246 223 391 4.89e-45 159
MS.gene99984.t1 AT1G68920 52.571 175 68 3 81 246 223 391 4.89e-45 159
MS.gene99984.t1 AT1G68920 75.758 99 24 0 148 246 292 390 5.86e-45 159
MS.gene99984.t1 AT3G23690 61.029 136 42 3 97 232 141 265 7.11e-44 153
MS.gene99984.t1 AT5G50915 56.115 139 49 3 93 229 79 207 2.63e-43 149
MS.gene99984.t1 AT5G50915 56.115 139 49 3 93 229 79 207 2.63e-43 149
MS.gene99984.t1 AT5G50915 56.522 138 48 3 93 228 79 206 6.84e-43 148
MS.gene99984.t1 AT5G50915 56.522 138 48 3 93 228 79 206 6.84e-43 148
MS.gene99984.t1 AT1G10120 70.833 96 28 0 151 246 199 294 2.38e-42 149
MS.gene99984.t1 AT1G10120 70.833 96 28 0 151 246 199 294 2.38e-42 149
MS.gene99984.t1 AT4G36540 52.740 146 67 1 101 244 82 227 6.95e-42 146
MS.gene99984.t1 AT4G36540 53.472 144 65 1 101 242 82 225 2.06e-41 145
MS.gene99984.t1 AT2G18300 70.103 97 29 0 148 244 175 271 6.44e-41 144
MS.gene99984.t1 AT4G34530 82.500 80 14 0 152 231 166 245 1.29e-40 144
MS.gene99984.t1 AT2G18300 70.103 97 29 0 148 244 175 271 1.50e-40 144
MS.gene99984.t1 AT2G18300 71.579 95 27 0 148 242 175 269 1.97e-40 143
MS.gene99984.t1 AT2G42300 69.318 88 27 0 152 239 179 266 2.51e-38 136
MS.gene99984.t1 AT3G57800 71.591 88 25 0 152 239 198 285 6.84e-38 137
MS.gene99984.t1 AT2G42300 65.957 94 32 0 152 245 179 272 1.19e-37 135
MS.gene99984.t1 AT1G25330 48.507 134 60 2 115 246 66 192 3.86e-34 124
MS.gene99984.t1 AT1G18400 74.667 75 19 0 156 230 143 217 7.96e-34 124
MS.gene99984.t1 AT1G18400 74.667 75 19 0 156 230 143 217 1.35e-33 123
MS.gene99984.t1 AT1G73830 69.512 82 25 0 157 238 146 227 2.71e-33 122
MS.gene99984.t1 AT1G73830 69.512 82 25 0 157 238 146 227 2.78e-33 122
MS.gene99984.t1 AT3G57800 46.667 135 25 1 152 239 198 332 5.08e-29 114
MS.gene99984.t1 AT2G24260 63.014 73 26 1 151 223 28 99 1.53e-22 94.0
MS.gene99984.t1 AT2G24260 63.014 73 26 1 151 223 131 202 1.19e-21 93.6
MS.gene99984.t1 AT4G30980 68.182 66 20 1 158 223 130 194 5.34e-21 90.9
MS.gene99984.t1 AT4G30980 68.182 66 20 1 158 223 178 242 6.61e-21 91.7
MS.gene99984.t1 AT5G58010 61.842 76 28 1 148 223 89 163 7.35e-21 90.5
MS.gene99984.t1 AT2G42300 78.723 47 10 0 152 198 179 225 2.55e-19 84.7
MS.gene99984.t1 AT2G42300 78.723 47 10 0 152 198 179 225 2.55e-19 84.7
MS.gene99984.t1 AT2G42300 80.435 46 9 0 152 197 179 224 3.29e-19 84.7
MS.gene99984.t1 AT4G02590 49.515 103 46 3 126 223 46 147 1.25e-15 75.1
MS.gene99984.t1 AT4G02590 49.515 103 46 3 126 223 109 210 2.23e-15 75.1
MS.gene99984.t1 AT4G02590 49.515 103 46 3 126 223 109 210 2.23e-15 75.1
MS.gene99984.t1 AT2G20180 51.562 64 30 1 160 223 209 271 5.14e-15 75.1
MS.gene99984.t1 AT2G20180 51.562 64 30 1 160 223 209 271 5.14e-15 75.1
MS.gene99984.t1 AT2G20180 51.562 64 30 1 160 223 209 271 5.14e-15 75.1
MS.gene99984.t1 AT2G20180 51.562 64 30 1 160 223 280 342 6.54e-15 74.7
MS.gene99984.t1 AT2G20180 51.562 64 30 1 160 223 280 342 6.54e-15 74.7
MS.gene99984.t1 AT2G20180 51.562 64 30 1 160 223 280 342 6.54e-15 74.7
MS.gene99984.t1 AT2G20180 51.562 64 30 1 160 223 280 342 6.54e-15 74.7
MS.gene99984.t1 AT1G09530 50.000 64 31 1 160 223 339 401 8.02e-15 74.7
MS.gene99984.t1 AT1G09530 50.000 64 31 1 160 223 339 401 8.02e-15 74.7
MS.gene99984.t1 AT1G09530 50.000 64 31 1 160 223 339 401 8.02e-15 74.7
MS.gene99984.t1 AT1G09530 50.000 64 31 1 160 223 339 401 8.02e-15 74.7
MS.gene99984.t1 AT1G09530 50.000 64 31 1 160 223 339 401 8.02e-15 74.7
MS.gene99984.t1 AT1G09530 50.000 64 31 1 160 223 339 401 8.02e-15 74.7
MS.gene99984.t1 AT1G03040 48.544 103 47 3 126 223 107 208 1.96e-14 72.4
MS.gene99984.t1 AT1G03040 48.544 103 47 3 126 223 107 208 2.29e-14 72.8
MS.gene99984.t1 AT4G28800 44.000 75 41 1 161 235 252 325 1.46e-13 70.9
MS.gene99984.t1 AT1G03040 54.217 83 35 2 143 223 122 203 2.27e-13 69.3
MS.gene99984.t1 AT2G20180 50.820 61 29 1 160 220 280 339 3.04e-13 69.3
MS.gene99984.t1 AT1G51140 53.125 64 30 0 158 221 304 367 4.10e-13 69.3
MS.gene99984.t1 AT2G42280 50.000 64 32 0 158 221 279 342 4.12e-13 68.9
MS.gene99984.t1 AT4G28815 51.724 58 27 1 161 218 71 127 4.28e-13 67.8
MS.gene99984.t1 AT4G09180 46.269 67 36 0 156 222 182 248 7.38e-13 67.4
MS.gene99984.t1 AT2G42280 51.515 66 30 1 158 221 279 344 8.06e-13 68.2
MS.gene99984.t1 AT4G28800 45.833 72 37 2 161 231 264 334 1.08e-12 68.2
MS.gene99984.t1 AT4G28790 35.200 125 61 5 160 280 273 381 1.36e-12 67.8
MS.gene99984.t1 AT4G28815 51.724 58 27 1 161 218 147 203 1.44e-12 67.0
MS.gene99984.t1 AT2G46970 43.836 73 35 2 156 223 216 287 2.11e-12 67.4
MS.gene99984.t1 AT2G46970 43.836 73 35 2 156 223 185 256 2.49e-12 67.0
MS.gene99984.t1 AT2G46970 43.836 73 35 2 156 223 194 265 2.68e-12 67.0
MS.gene99984.t1 AT4G33880 42.857 84 45 2 141 222 247 329 3.76e-12 66.2
MS.gene99984.t1 AT1G35460 46.154 65 35 0 158 222 181 245 5.33e-12 65.1
MS.gene99984.t1 AT4G00050 47.692 65 33 1 158 222 105 168 1.28e-11 64.3
MS.gene99984.t1 AT2G14760 49.231 65 32 1 158 222 237 300 1.99e-11 63.9
MS.gene99984.t1 AT1G27740 49.231 65 32 1 158 222 167 230 2.10e-11 63.2
MS.gene99984.t1 AT4G00050 47.692 65 33 1 158 222 207 270 2.17e-11 64.3
MS.gene99984.t1 AT4G00050 47.692 65 33 1 158 222 207 270 2.58e-11 63.9
MS.gene99984.t1 AT4G36930 47.541 61 31 1 164 224 197 256 7.94e-11 62.4

Find 96 sgRNAs with CRISPR-Local

Find 189 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTTCTTCAATTTAGGTTAT+TGG 0.179282 8.4:+39375993 MS.gene99984:intron
TGCTTAACACTTACATCTTT+TGG 0.201350 8.4:-39376248 None:intergenic
GCGGAGGTGGATTGGGATTA+AGG 0.250601 8.4:+39374252 MS.gene99984:CDS
TTTCTTCAATTTAGGTTATT+GGG 0.256415 8.4:+39375994 MS.gene99984:intron
CAGTTTCCAGCGGCGATTAA+TGG 0.284846 8.4:+39374227 MS.gene99984:CDS
CCGCAGTTTGGTAACGGTTT+AGG 0.285659 8.4:+39374278 MS.gene99984:CDS
TTTAGTTCCTGGTTGTAATA+AGG 0.288451 8.4:+39375756 MS.gene99984:CDS
GGCATTGGCACCGCCATTAC+TGG 0.323699 8.4:-39374438 None:intergenic
ATTCTACAGGATTTAGTTCC+TGG 0.338943 8.4:+39375745 MS.gene99984:CDS
TTAGGACAGTTTGGTGAGTT+TGG 0.345423 8.4:+39374296 MS.gene99984:CDS
CGTTTAGTTTAGCGGAGATC+TGG 0.375505 8.4:+39374204 MS.gene99984:CDS
CAACAAACGTTTGATCTTGC+CGG 0.377074 8.4:+39376819 MS.gene99984:CDS
AATGGCGGCGGAGGTGGATT+GGG 0.378673 8.4:+39374245 MS.gene99984:CDS
ACCTGCATATGTAACCATTC+TGG 0.392490 8.4:-39376891 None:intergenic
AGTTTGGACCCGGTTTGAAC+CGG 0.394572 8.4:+39374312 MS.gene99984:CDS
CCCTCGTTCATCATCGCTCC+TGG 0.400423 8.4:-39374149 None:intergenic
ACATCCATGTTCGAGCTAGA+AGG 0.403285 8.4:+39375336 MS.gene99984:CDS
TGGACAATAAACAGGCTAGA+AGG 0.405648 8.4:+39375698 MS.gene99984:intron
CAGATCTCCGCTAAACTAAA+CGG 0.416576 8.4:-39374203 None:intergenic
GTTGAAGGAGAAGTCAGTTC+AGG 0.418689 8.4:+39375257 MS.gene99984:CDS
TAATGGCGGCGGAGGTGGAT+TGG 0.422484 8.4:+39374244 MS.gene99984:CDS
GCGATTAATGGCGGCGGAGG+TGG 0.426598 8.4:+39374239 MS.gene99984:CDS
ATTACCATCCCGGTTCAAAC+CGG 0.435247 8.4:-39374321 None:intergenic
CAGTTTGGTGAGTTTGGACC+CGG 0.446797 8.4:+39374302 MS.gene99984:CDS
GGAAAACGGACTAAAGCATC+AGG 0.450766 8.4:+39375206 MS.gene99984:CDS
CTTGTAGCTTGTGAAACAAA+TGG 0.451137 8.4:-39376846 None:intergenic
TACGACGCCGTTTAGTTTAG+CGG 0.455033 8.4:+39374196 MS.gene99984:CDS
TGAAAGGATGAAAATTCTAC+AGG 0.461627 8.4:+39375732 MS.gene99984:CDS
TAGTGAACCGAAATGGATCC+AGG 0.464407 8.4:+39374131 None:intergenic
GTCGTATTTCCATTCCCATT+CGG 0.470342 8.4:-39374179 None:intergenic
CATCCATGTTCGAGCTAGAA+GGG 0.474849 8.4:+39375337 MS.gene99984:CDS
GGTTCATTTCCGAATGGGAA+TGG 0.479304 8.4:+39374170 MS.gene99984:CDS
ACCAGAATGGTTACATATGC+AGG 0.483200 8.4:+39376890 MS.gene99984:CDS
GGTAACGGTTTAGGACAGTT+TGG 0.484684 8.4:+39374287 MS.gene99984:CDS
GGATTAAGGAGGCCGCAGTT+TGG 0.490559 8.4:+39374266 MS.gene99984:CDS
AACCATGGTGGTGTTGGTGG+TGG 0.493213 8.4:+39374368 MS.gene99984:CDS
ACATGGATGTAATCTTGCTT+AGG 0.502301 8.4:-39375323 None:intergenic
ACGAGGGTTCATTTCCGAAT+GGG 0.502721 8.4:+39374165 MS.gene99984:CDS
AACAAGAATGAGGGTGGTGA+TGG 0.502949 8.4:+39375230 MS.gene99984:CDS
CCGCCGCCATTAATCGCCGC+TGG 0.503828 8.4:-39374233 None:intergenic
TTGAACCATGGTGGTGTTGG+TGG 0.507286 8.4:+39374365 MS.gene99984:CDS
GCGGCGATTAATGGCGGCGG+AGG 0.511591 8.4:+39374236 MS.gene99984:CDS
AAATATGAATACCACGGCAT+TGG 0.511653 8.4:-39374453 None:intergenic
GCAGAGGTTCTTCACCAGAA+TGG 0.515410 8.4:+39376877 MS.gene99984:CDS
TGGATGTAATCTTGCTTAGG+AGG 0.520256 8.4:-39375320 None:intergenic
TGGAGGAAAGGCTTCAATGC+CGG 0.520377 8.4:-39376228 None:intergenic
GTTTGGACCCGGTTTGAACC+GGG 0.528926 8.4:+39374313 MS.gene99984:CDS
TTAGGTTATTGGGAAAGCAT+TGG 0.529281 8.4:+39376004 MS.gene99984:intron
GGTTTGAACCGGGATGGTAA+TGG 0.532358 8.4:+39374323 MS.gene99984:CDS
TCTGGTGAAGAACCTCTGCT+TGG 0.539168 8.4:-39376873 None:intergenic
AAGTGTGTTTCCACCAGTAA+TGG 0.540169 8.4:+39374425 MS.gene99984:CDS
GGACAATAAACAGGCTAGAA+GGG 0.544423 8.4:+39375699 MS.gene99984:intron
AGGAGGCCGCAGTTTGGTAA+CGG 0.546654 8.4:+39374272 MS.gene99984:CDS
CCAGCGGCGATTAATGGCGG+CGG 0.557594 8.4:+39374233 MS.gene99984:CDS
ACTCCGGTCCATTACCATCC+CGG 0.557819 8.4:-39374331 None:intergenic
TTACATATGCAGGTAGGTGG+TGG 0.558363 8.4:+39376900 MS.gene99984:CDS
AGCATCAGGGAACAAGAATG+AGG 0.561192 8.4:+39375220 MS.gene99984:CDS
AGAATGATAGTGATGGAAAA+CGG 0.563521 8.4:+39375192 MS.gene99984:intron
AACGAGGGTTCATTTCCGAA+TGG 0.564078 8.4:+39374164 MS.gene99984:CDS
TTGTGAAACAAATGGCATGC+CGG 0.566973 8.4:-39376838 None:intergenic
GACCCCTTCTAGCTCGAACA+TGG 0.574237 8.4:-39375340 None:intergenic
GAACCGGGATGGTAATGGAC+CGG 0.574270 8.4:+39374328 MS.gene99984:CDS
TTACCATCCCGGTTCAAACC+GGG 0.575921 8.4:-39374320 None:intergenic
GAAGGGAAAAGATTAGTGAA+AGG 0.577890 8.4:+39375716 MS.gene99984:CDS
GGTGGTGATGGTAAAGTTGA+AGG 0.578873 8.4:+39375242 MS.gene99984:CDS
TTTCCAGCGGCGATTAATGG+CGG 0.585609 8.4:+39374230 MS.gene99984:CDS
GTTAATTCAAGACTCAATAC+CGG 0.586424 8.4:+39376209 MS.gene99984:CDS
TTAGGAGGGTCAGAAGGAGG+TGG 0.592041 8.4:-39375305 None:intergenic
ATCACTTCAGCGCCAAGTGG+AGG 0.597164 8.4:+39376055 MS.gene99984:CDS
TCTTGCTTAGGAGGGTCAGA+AGG 0.603501 8.4:-39375311 None:intergenic
TTCAAAACAACTCTTGACTC+CGG 0.616543 8.4:-39374347 None:intergenic
AACATTACCTTATTACAACC+AGG 0.621430 8.4:-39375763 None:intergenic
GGACCCGGTTTGAACCGGGA+TGG 0.621696 8.4:+39374317 MS.gene99984:CDS
GCATCAGGGAACAAGAATGA+GGG 0.629320 8.4:+39375221 MS.gene99984:CDS
GGATGTAATCTTGCTTAGGA+GGG 0.631066 8.4:-39375319 None:intergenic
TCCAGGAGCGATGATGAACG+AGG 0.631852 8.4:+39374148 MS.gene99984:CDS
TAATGGCGGTGCCAATGCCG+TGG 0.636011 8.4:+39374442 MS.gene99984:CDS
TGCTTAGGAGGGTCAGAAGG+AGG 0.637170 8.4:-39375308 None:intergenic
ATCCATGTTCGAGCTAGAAG+GGG 0.638122 8.4:+39375338 MS.gene99984:CDS
GCTACAAGAGAGCCAAGCAG+AGG 0.640109 8.4:+39376861 MS.gene99984:CDS
ATTGGCACCGCCATTACTGG+TGG 0.652469 8.4:-39374435 None:intergenic
TGGTTACATATGCAGGTAGG+TGG 0.652770 8.4:+39376897 MS.gene99984:CDS
GGAGATCTGGCAGTTTCCAG+CGG 0.658016 8.4:+39374217 MS.gene99984:CDS
TCAATCACTTCAGCGCCAAG+TGG 0.659625 8.4:+39376052 MS.gene99984:CDS
ATAGAATAGATACCTCCACT+TGG 0.671733 8.4:-39376067 None:intergenic
TACCACCACCAACACCACCA+TGG 0.672358 8.4:-39374370 None:intergenic
TGTGTTTCCACCAGTAATGG+CGG 0.675613 8.4:+39374428 MS.gene99984:CDS
TCAGGGAACAAGAATGAGGG+TGG 0.675624 8.4:+39375224 MS.gene99984:CDS
AGTCAGTTCAGGAAAGCATG+CGG 0.677155 8.4:+39375268 MS.gene99984:CDS
GAATGGTTACATATGCAGGT+AGG 0.689550 8.4:+39376894 MS.gene99984:CDS
CCTAAACCGTTACCAAACTG+CGG 0.692391 8.4:-39374278 None:intergenic
CCAGGAGCGATGATGAACGA+GGG 0.693487 8.4:+39374149 MS.gene99984:CDS
TTACGCGTTCTGCAAGACTG+TGG 0.695452 8.4:-39375376 None:intergenic
GAAAACGGACTAAAGCATCA+GGG 0.713041 8.4:+39375207 MS.gene99984:CDS
ATTGTGCAGAATGATAGTGA+TGG 0.726537 8.4:+39375185 MS.gene99984:intron
GAGGTGGATTGGGATTAAGG+AGG 0.727044 8.4:+39374255 MS.gene99984:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAACTAAATTATTACAATAA+AGG - chr8.4:39375100-39375119 None:intergenic 10.0%
!! TTAATGGAATTATTATTATT+TGG + chr8.4:39375162-39375181 MS.gene99984:intron 10.0%
!! TTTAATGAATATACTTAAAA+CGG + chr8.4:39374628-39374647 MS.gene99984:intron 10.0%
!!! AAAACATAATAAATTTTGAA+AGG - chr8.4:39376123-39376142 None:intergenic 10.0%
!!! TATTAAATATATGTATTTTG+GGG + chr8.4:39374567-39374586 MS.gene99984:intron 10.0%
!!! TGTGTTTTTTATTTTATTAT+TGG + chr8.4:39374705-39374724 MS.gene99984:intron 10.0%
!!! TTTTTTTTTTTGGTTATATT+TGG + chr8.4:39374496-39374515 MS.gene99984:intron 10.0%
!! AGTTTCAATATAAAAATCAA+GGG - chr8.4:39376275-39376294 None:intergenic 15.0%
!! ATAATAATAAACCAAATGAA+AGG + chr8.4:39375850-39375869 MS.gene99984:intron 15.0%
!! TTAAGGAAAATGTAAATTTA+TGG + chr8.4:39375627-39375646 MS.gene99984:intron 15.0%
!!! GTTTTTAATCATTGTATTTT+TGG + chr8.4:39374661-39374680 MS.gene99984:intron 15.0%
!!! TTCACTTTTGATTTTAAAAT+TGG + chr8.4:39374878-39374897 MS.gene99984:intron 15.0%
!! AAGAAAAAATATGAATACCA+CGG - chr8.4:39374462-39374481 None:intergenic 20.0%
!! AGGAAAATTTACAAATAAAG+AGG - chr8.4:39376325-39376344 None:intergenic 20.0%
!! ATATGTGTATTTGATGTATT+TGG + chr8.4:39375123-39375142 MS.gene99984:intron 20.0%
!! CATCATTGTTTAAAAAACAT+TGG + chr8.4:39376756-39376775 MS.gene99984:intron 20.0%
!! GAGTTTCAATATAAAAATCA+AGG - chr8.4:39376276-39376295 None:intergenic 20.0%
!! GGAAAATTTACAAATAAAGA+GGG - chr8.4:39376324-39376343 None:intergenic 20.0%
!! TAAACAAGATTTAACATCAT+AGG - chr8.4:39375610-39375629 None:intergenic 20.0%
!! TTTAGTAATTTCCTTTCATT+TGG - chr8.4:39375864-39375883 None:intergenic 20.0%
!!! AACTGTTATTTTCTTTTCAT+GGG - chr8.4:39375911-39375930 None:intergenic 20.0%
!!! AATTTTTCTCCAGAATAATT+AGG - chr8.4:39375077-39375096 None:intergenic 20.0%
!!! ACTCTTATGTTATTGTTTTT+AGG + chr8.4:39375428-39375447 MS.gene99984:intron 20.0%
!!! AGATTTTGCTTCATTTTTTT+TGG + chr8.4:39374753-39374772 MS.gene99984:intron 20.0%
!!! ATCTATTCTATTTCTGATTT+TGG + chr8.4:39376079-39376098 MS.gene99984:intron 20.0%
!!! ATGATGTTAAATCTTGTTTA+AGG + chr8.4:39375610-39375629 MS.gene99984:intron 20.0%
!!! ATTTTTTTTGGGTACTTAAA+AGG + chr8.4:39374765-39374784 MS.gene99984:intron 20.0%
!!! GATTTTGCTTCATTTTTTTT+GGG + chr8.4:39374754-39374773 MS.gene99984:intron 20.0%
!!! TAACTGTTATTTTCTTTTCA+TGG - chr8.4:39375912-39375931 None:intergenic 20.0%
!!! TTTCTTCAATTTAGGTTATT+GGG + chr8.4:39375994-39376013 MS.gene99984:intron 20.0%
!!! TTTTTTTGGTTATATTTGGA+AGG + chr8.4:39374500-39374519 MS.gene99984:intron 20.0%
! ATTATAACTGACCAACAATT+AGG - chr8.4:39375942-39375961 None:intergenic 25.0%
! ATTGAGACTTTCTTCAATTT+AGG + chr8.4:39375986-39376005 MS.gene99984:intron 25.0%
! CTAAAAGAGTTGTAAGTAAA+GGG - chr8.4:39375406-39375425 None:intergenic 25.0%
! GAAAGGAAATTACTAAAAGT+AGG + chr8.4:39375867-39375886 MS.gene99984:intron 25.0%
! GAGGATACAGATTAAAAATT+TGG + chr8.4:39376691-39376710 MS.gene99984:intron 25.0%
! GATAAATATACTTGATTGAG+AGG + chr8.4:39376672-39376691 MS.gene99984:intron 25.0%
! TCATAAAACGGTAGATAATT+GGG - chr8.4:39375002-39375021 None:intergenic 25.0%
! TCTAAAAGAGTTGTAAGTAA+AGG - chr8.4:39375407-39375426 None:intergenic 25.0%
! TGAAAGCAGAAAAAATTAAC+AGG - chr8.4:39375796-39375815 None:intergenic 25.0%
! TGAACATTGGATTAATCTAA+GGG - chr8.4:39376636-39376655 None:intergenic 25.0%
! TTGAACATTGGATTAATCTA+AGG - chr8.4:39376637-39376656 None:intergenic 25.0%
! TTGCAATCATTGTCATAAAA+CGG - chr8.4:39375014-39375033 None:intergenic 25.0%
!! CAATATAAGGACCAAAATTT+TGG + chr8.4:39374956-39374975 MS.gene99984:intron 25.0%
!! CTTTCTTCAATTTAGGTTAT+TGG + chr8.4:39375993-39376012 MS.gene99984:intron 25.0%
!! TATGCAAACTTATTCAAGTT+TGG + chr8.4:39374901-39374920 MS.gene99984:intron 25.0%
!! TTGATGTATTTGGAATTAGT+CGG + chr8.4:39375133-39375152 MS.gene99984:intron 25.0%
!!! GTAAATTTATGGTTTTGTTG+CGG + chr8.4:39375638-39375657 MS.gene99984:intron 25.0%
!!! TCATTTGCAAATTTTGTTGT+TGG + chr8.4:39376468-39376487 MS.gene99984:intron 25.0%
AAATGAAGCAAAATCTTGAG+CGG - chr8.4:39374749-39374768 None:intergenic 30.0%
AACATTACCTTATTACAACC+AGG - chr8.4:39375766-39375785 None:intergenic 30.0%
AACATTCCAATTAGAAACAG+AGG - chr8.4:39375676-39375695 None:intergenic 30.0%
AATGGTTGTCCTAATTATTC+TGG + chr8.4:39375065-39375084 MS.gene99984:intron 30.0%
AATTAGTCGGTGTGATTTAA+TGG + chr8.4:39375146-39375165 MS.gene99984:intron 30.0%
ATTCTTGATATTGAGAAGTG+CGG - chr8.4:39375572-39375591 None:intergenic 30.0%
GATGTCTTTGCTACAATATA+AGG + chr8.4:39374943-39374962 MS.gene99984:intron 30.0%
GTCATAAAACGGTAGATAAT+TGG - chr8.4:39375003-39375022 None:intergenic 30.0%
GTTAATTCAAGACTCAATAC+CGG + chr8.4:39376209-39376228 MS.gene99984:CDS 30.0%
GTTATGATCTTCCTAATTGT+TGG + chr8.4:39375928-39375947 MS.gene99984:intron 30.0%
TACAGCTAAAGATTGAACAT+TGG - chr8.4:39376649-39376668 None:intergenic 30.0%
TGAAAGGATGAAAATTCTAC+AGG + chr8.4:39375732-39375751 MS.gene99984:CDS 30.0%
TGAATAATGTCTGCAAAAGA+TGG - chr8.4:39376431-39376450 None:intergenic 30.0%
TGGAAAGAGAGAAAAAAACT+AGG - chr8.4:39376792-39376811 None:intergenic 30.0%
TGTTGCAAGTATGTATAACA+AGG + chr8.4:39376400-39376419 MS.gene99984:intron 30.0%
! AGAATGATAGTGATGGAAAA+CGG + chr8.4:39375192-39375211 MS.gene99984:intron 30.0%
! ATTTTCCTTCTAACAAGACA+TGG + chr8.4:39376337-39376356 MS.gene99984:intron 30.0%
! TGCTTAACACTTACATCTTT+TGG - chr8.4:39376251-39376270 None:intergenic 30.0%
! TTAACACTTACATCTTTTGG+AGG - chr8.4:39376248-39376267 None:intergenic 30.0%
! TTCACAAACTATTTTGCCTA+TGG + chr8.4:39374829-39374848 MS.gene99984:intron 30.0%
! TTTAGTTCCTGGTTGTAATA+AGG + chr8.4:39375756-39375775 MS.gene99984:CDS 30.0%
!! TATTTTGGGGAGTGATTAAT+TGG + chr8.4:39374580-39374599 MS.gene99984:intron 30.0%
!! TCTGTTTCTAATTGGAATGT+TGG + chr8.4:39375675-39375694 MS.gene99984:intron 30.0%
!!! TTTTTTCTCTCTTTCCAGTA+TGG + chr8.4:39376795-39376814 MS.gene99984:intron 30.0%
AAATATGAATACCACGGCAT+TGG - chr8.4:39374456-39374475 None:intergenic 35.0%
AATGAAGCAAAATCTTGAGC+GGG - chr8.4:39374748-39374767 None:intergenic 35.0%
ACATGGATGTAATCTTGCTT+AGG - chr8.4:39375326-39375345 None:intergenic 35.0%
ATAGAATAGATACCTCCACT+TGG - chr8.4:39376070-39376089 None:intergenic 35.0%
ATGAATGATAGCTTCTCACT+AGG + chr8.4:39376532-39376551 MS.gene99984:intron 35.0%
GAAGGGAAAAGATTAGTGAA+AGG + chr8.4:39375716-39375735 MS.gene99984:CDS 35.0%
GTTTCTAATTGGAATGTTGG+TGG + chr8.4:39375678-39375697 MS.gene99984:intron 35.0%
TGTTCAATCTTTAGCTGTAG+AGG + chr8.4:39376650-39376669 MS.gene99984:intron 35.0%
TTCAAAACAACTCTTGACTC+CGG - chr8.4:39374350-39374369 None:intergenic 35.0%
TTCGAACTTCGATGTCTAAA+TGG + chr8.4:39375047-39375066 MS.gene99984:intron 35.0%
! AATGTTGGTGGACAATAAAC+AGG + chr8.4:39375690-39375709 MS.gene99984:intron 35.0%
! ATTCTACAGGATTTAGTTCC+TGG + chr8.4:39375745-39375764 MS.gene99984:CDS 35.0%
! ATTGTGCAGAATGATAGTGA+TGG + chr8.4:39375185-39375204 MS.gene99984:intron 35.0%
! CTTGTAGCTTGTGAAACAAA+TGG - chr8.4:39376849-39376868 None:intergenic 35.0%
! GTTTGAGATTACACTTCCAT+AGG - chr8.4:39374848-39374867 None:intergenic 35.0%
! TTAGGTTATTGGGAAAGCAT+TGG + chr8.4:39376004-39376023 MS.gene99984:intron 35.0%
!! ACTTACATCTTTTGGAGGAA+AGG - chr8.4:39376243-39376262 None:intergenic 35.0%
!! TCTATGCCTCTGTTTCTAAT+TGG + chr8.4:39375667-39375686 MS.gene99984:intron 35.0%
!!! TCAAGAGTTGTTTTGAACCA+TGG + chr8.4:39374353-39374372 MS.gene99984:CDS 35.0%
AAGTGTGTTTCCACCAGTAA+TGG + chr8.4:39374425-39374444 MS.gene99984:CDS 40.0%
ACCAGAATGGTTACATATGC+AGG + chr8.4:39376890-39376909 MS.gene99984:CDS 40.0%
ACCTGCATATGTAACCATTC+TGG - chr8.4:39376894-39376913 None:intergenic 40.0%
ACTCACGAGTATAGTAGTTC+TGG + chr8.4:39376368-39376387 MS.gene99984:intron 40.0%
CAACAAACGTTTGATCTTGC+CGG + chr8.4:39376819-39376838 MS.gene99984:CDS 40.0%
CAGATCTCCGCTAAACTAAA+CGG - chr8.4:39374206-39374225 None:intergenic 40.0%
GAATGGTTACATATGCAGGT+AGG + chr8.4:39376894-39376913 MS.gene99984:CDS 40.0%
GGACAATAAACAGGCTAGAA+GGG + chr8.4:39375699-39375718 MS.gene99984:intron 40.0%
GGATGTAATCTTGCTTAGGA+GGG - chr8.4:39375322-39375341 None:intergenic 40.0%
GTCGTATTTCCATTCCCATT+CGG - chr8.4:39374182-39374201 None:intergenic 40.0%
TGGACAATAAACAGGCTAGA+AGG + chr8.4:39375698-39375717 MS.gene99984:intron 40.0%
TGGATGTAATCTTGCTTAGG+AGG - chr8.4:39375323-39375342 None:intergenic 40.0%
TTGTGAAACAAATGGCATGC+CGG - chr8.4:39376841-39376860 None:intergenic 40.0%
TTTAAGAAGCTTGCAACCTC+TGG + chr8.4:39376575-39376594 MS.gene99984:intron 40.0%
! AGTAGGAAAAACGTGCTACT+TGG + chr8.4:39375884-39375903 MS.gene99984:intron 40.0%
! CAAACGTTTGTTGACCATAC+TGG - chr8.4:39376812-39376831 None:intergenic 40.0%
! GAGCGAAGTAGCCAAAATTT+TGG - chr8.4:39374970-39374989 None:intergenic 40.0%
! TTAGGACAGTTTGGTGAGTT+TGG + chr8.4:39374296-39374315 MS.gene99984:CDS 40.0%
!! GAAAACGGACTAAAGCATCA+GGG + chr8.4:39375207-39375226 MS.gene99984:CDS 40.0%
!! GTAGGAAAAACGTGCTACTT+GGG + chr8.4:39375885-39375904 MS.gene99984:intron 40.0%
!!! AGAGTTGTTTTGAACCATGG+TGG + chr8.4:39374356-39374375 MS.gene99984:CDS 40.0%
AACAAGAATGAGGGTGGTGA+TGG + chr8.4:39375230-39375249 MS.gene99984:CDS 45.0%
AACCTCTGGTCTCTGCATAA+TGG + chr8.4:39376589-39376608 MS.gene99984:intron 45.0%
AACGAGGGTTCATTTCCGAA+TGG + chr8.4:39374164-39374183 MS.gene99984:CDS 45.0%
ACATCCATGTTCGAGCTAGA+AGG + chr8.4:39375336-39375355 MS.gene99984:CDS 45.0%
ACCTCTGGTCTCTGCATAAT+GGG + chr8.4:39376590-39376609 MS.gene99984:intron 45.0%
ACGAGGGTTCATTTCCGAAT+GGG + chr8.4:39374165-39374184 MS.gene99984:CDS 45.0%
AGCATCAGGGAACAAGAATG+AGG + chr8.4:39375220-39375239 MS.gene99984:CDS 45.0%
ATCCATGTTCGAGCTAGAAG+GGG + chr8.4:39375338-39375357 MS.gene99984:CDS 45.0%
ATTACCATCCCGGTTCAAAC+CGG - chr8.4:39374324-39374343 None:intergenic 45.0%
CAAGTTTGGTCGCGATTTCA+AGG + chr8.4:39374915-39374934 MS.gene99984:intron 45.0%
CATCCATGTTCGAGCTAGAA+GGG + chr8.4:39375337-39375356 MS.gene99984:CDS 45.0%
CCTAAACCGTTACCAAACTG+CGG - chr8.4:39374281-39374300 None:intergenic 45.0%
GCATCAGGGAACAAGAATGA+GGG + chr8.4:39375221-39375240 MS.gene99984:CDS 45.0%
GGTTCATTTCCGAATGGGAA+TGG + chr8.4:39374170-39374189 MS.gene99984:CDS 45.0%
GTTGAAGGAGAAGTCAGTTC+AGG + chr8.4:39375257-39375276 MS.gene99984:CDS 45.0%
TGGTTACATATGCAGGTAGG+TGG + chr8.4:39376897-39376916 MS.gene99984:CDS 45.0%
TGTGTTTCCACCAGTAATGG+CGG + chr8.4:39374428-39374447 MS.gene99984:CDS 45.0%
TTACATATGCAGGTAGGTGG+TGG + chr8.4:39376900-39376919 MS.gene99984:CDS 45.0%
! AGTCAGTTCAGGAAAGCATG+CGG + chr8.4:39375268-39375287 MS.gene99984:CDS 45.0%
! CGTTTAGTTTAGCGGAGATC+TGG + chr8.4:39374204-39374223 MS.gene99984:CDS 45.0%
! GGTAACGGTTTAGGACAGTT+TGG + chr8.4:39374287-39374306 MS.gene99984:CDS 45.0%
! TACGACGCCGTTTAGTTTAG+CGG + chr8.4:39374196-39374215 MS.gene99984:CDS 45.0%
!! GGAAAACGGACTAAAGCATC+AGG + chr8.4:39375206-39375225 MS.gene99984:CDS 45.0%
!! GGTGGTGATGGTAAAGTTGA+AGG + chr8.4:39375242-39375261 MS.gene99984:CDS 45.0%
!! GTTTTGAACCATGGTGGTGT+TGG + chr8.4:39374362-39374381 MS.gene99984:CDS 45.0%
!!! AATATTAAATATATGTATTT+TGG + chr8.4:39374565-39374584 MS.gene99984:intron 5.0%
!!! ATATTAAATATATGTATTTT+GGG + chr8.4:39374566-39374585 MS.gene99984:intron 5.0%
!!! TTTTTAGTTTTTTTTTTTTT+TGG + chr8.4:39374486-39374505 MS.gene99984:intron 5.0%
CAGTTTCCAGCGGCGATTAA+TGG + chr8.4:39374227-39374246 MS.gene99984:CDS 50.0%
GCAGAGGTTCTTCACCAGAA+TGG + chr8.4:39376877-39376896 MS.gene99984:CDS 50.0%
GGTTTGAACCGGGATGGTAA+TGG + chr8.4:39374323-39374342 MS.gene99984:CDS 50.0%
TCAATCACTTCAGCGCCAAG+TGG + chr8.4:39376052-39376071 MS.gene99984:CDS 50.0%
TCAGGGAACAAGAATGAGGG+TGG + chr8.4:39375224-39375243 MS.gene99984:CDS 50.0%
TCTGGTGAAGAACCTCTGCT+TGG - chr8.4:39376876-39376895 None:intergenic 50.0%
TCTTGCTTAGGAGGGTCAGA+AGG - chr8.4:39375314-39375333 None:intergenic 50.0%
TGGAGGAAAGGCTTCAATGC+CGG - chr8.4:39376231-39376250 None:intergenic 50.0%
TTACCATCCCGGTTCAAACC+GGG - chr8.4:39374323-39374342 None:intergenic 50.0%
TTACGCGTTCTGCAAGACTG+TGG - chr8.4:39375379-39375398 None:intergenic 50.0%
TTTCCAGCGGCGATTAATGG+CGG + chr8.4:39374230-39374249 MS.gene99984:CDS 50.0%
! AGTTTGGACCCGGTTTGAAC+CGG + chr8.4:39374312-39374331 MS.gene99984:CDS 50.0%
! CAGTTTGGTGAGTTTGGACC+CGG + chr8.4:39374302-39374321 MS.gene99984:CDS 50.0%
! GCGAGCCATGTCTTGTTAGA+AGG - chr8.4:39376345-39376364 None:intergenic 50.0%
! TTGAACCATGGTGGTGTTGG+TGG + chr8.4:39374365-39374384 MS.gene99984:CDS 50.0%
!! CCGCAGTTTGGTAACGGTTT+AGG + chr8.4:39374278-39374297 MS.gene99984:CDS 50.0%
!! GAGGTGGATTGGGATTAAGG+AGG + chr8.4:39374255-39374274 MS.gene99984:CDS 50.0%
ACTCCGGTCCATTACCATCC+CGG - chr8.4:39374334-39374353 None:intergenic 55.0%
AGGAGGCCGCAGTTTGGTAA+CGG + chr8.4:39374272-39374291 MS.gene99984:CDS 55.0%
ATCACTTCAGCGCCAAGTGG+AGG + chr8.4:39376055-39376074 MS.gene99984:CDS 55.0%
ATGATGTCGCGCAGCCACAT+CGG - chr8.4:39375523-39375542 None:intergenic 55.0%
ATGTGGCTGCGCGACATCAT+AGG + chr8.4:39375523-39375542 MS.gene99984:intron 55.0%
ATTGGCACCGCCATTACTGG+TGG - chr8.4:39374438-39374457 None:intergenic 55.0%
CCAGGAGCGATGATGAACGA+GGG + chr8.4:39374149-39374168 MS.gene99984:CDS 55.0%
GCCCATTATGCAGAGACCAG+AGG - chr8.4:39376594-39376613 None:intergenic 55.0%
GCTACAAGAGAGCCAAGCAG+AGG + chr8.4:39376861-39376880 MS.gene99984:CDS 55.0%
GGAGATCTGGCAGTTTCCAG+CGG + chr8.4:39374217-39374236 MS.gene99984:CDS 55.0%
GGATTAAGGAGGCCGCAGTT+TGG + chr8.4:39374266-39374285 MS.gene99984:CDS 55.0%
TACCACCACCAACACCACCA+TGG - chr8.4:39374373-39374392 None:intergenic 55.0%
TCCAGGAGCGATGATGAACG+AGG + chr8.4:39374148-39374167 MS.gene99984:CDS 55.0%
TGCTTAGGAGGGTCAGAAGG+AGG - chr8.4:39375311-39375330 None:intergenic 55.0%
TTAGGAGGGTCAGAAGGAGG+TGG - chr8.4:39375308-39375327 None:intergenic 55.0%
! GTTTGGACCCGGTTTGAACC+GGG + chr8.4:39374313-39374332 MS.gene99984:CDS 55.0%
!! AACCATGGTGGTGTTGGTGG+TGG + chr8.4:39374368-39374387 MS.gene99984:CDS 55.0%
!! GAACCGGGATGGTAATGGAC+CGG + chr8.4:39374328-39374347 MS.gene99984:CDS 55.0%
!! GACCCCTTCTAGCTCGAACA+TGG - chr8.4:39375343-39375362 None:intergenic 55.0%
!! GCGGAGGTGGATTGGGATTA+AGG + chr8.4:39374252-39374271 MS.gene99984:CDS 55.0%
!! TGAGTTGAGAAGCGCCGATG+TGG + chr8.4:39375506-39375525 MS.gene99984:intron 55.0%
CCCTCGTTCATCATCGCTCC+TGG - chr8.4:39374152-39374171 None:intergenic 60.0%
TAATGGCGGCGGAGGTGGAT+TGG + chr8.4:39374244-39374263 MS.gene99984:CDS 60.0%
! AATGGCGGCGGAGGTGGATT+GGG + chr8.4:39374245-39374264 MS.gene99984:CDS 60.0%
! TAATGGCGGTGCCAATGCCG+TGG + chr8.4:39374442-39374461 MS.gene99984:CDS 60.0%
!! GGCATTGGCACCGCCATTAC+TGG - chr8.4:39374441-39374460 None:intergenic 60.0%
CCAGCGGCGATTAATGGCGG+CGG + chr8.4:39374233-39374252 MS.gene99984:CDS 65.0%
GCGATTAATGGCGGCGGAGG+TGG + chr8.4:39374239-39374258 MS.gene99984:CDS 65.0%
! GGACCCGGTTTGAACCGGGA+TGG + chr8.4:39374317-39374336 MS.gene99984:CDS 65.0%
CCGCCGCCATTAATCGCCGC+TGG - chr8.4:39374236-39374255 None:intergenic 70.0%
GCGGCGATTAATGGCGGCGG+AGG + chr8.4:39374236-39374255 MS.gene99984:CDS 70.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 39374143 39376941 39374143 ID=MS.gene99984
chr8.4 mRNA 39374143 39376941 39374143 ID=MS.gene99984.t1;Parent=MS.gene99984
chr8.4 exon 39374143 39374463 39374143 ID=MS.gene99984.t1.exon1;Parent=MS.gene99984.t1
chr8.4 CDS 39374143 39374463 39374143 ID=cds.MS.gene99984.t1;Parent=MS.gene99984.t1
chr8.4 exon 39375194 39375394 39375194 ID=MS.gene99984.t1.exon2;Parent=MS.gene99984.t1
chr8.4 CDS 39375194 39375394 39375194 ID=cds.MS.gene99984.t1;Parent=MS.gene99984.t1
chr8.4 exon 39375712 39375777 39375712 ID=MS.gene99984.t1.exon3;Parent=MS.gene99984.t1
chr8.4 CDS 39375712 39375777 39375712 ID=cds.MS.gene99984.t1;Parent=MS.gene99984.t1
chr8.4 exon 39376008 39376076 39376008 ID=MS.gene99984.t1.exon4;Parent=MS.gene99984.t1
chr8.4 CDS 39376008 39376076 39376008 ID=cds.MS.gene99984.t1;Parent=MS.gene99984.t1
chr8.4 exon 39376185 39376256 39376185 ID=MS.gene99984.t1.exon5;Parent=MS.gene99984.t1
chr8.4 CDS 39376185 39376256 39376185 ID=cds.MS.gene99984.t1;Parent=MS.gene99984.t1
chr8.4 exon 39376813 39376941 39376813 ID=MS.gene99984.t1.exon6;Parent=MS.gene99984.t1
chr8.4 CDS 39376813 39376941 39376813 ID=cds.MS.gene99984.t1;Parent=MS.gene99984.t1
Gene Sequence

>MS.gene99984

ATGGATCCAGGAGCGATGATGAACGAGGGTTCATTTCCGAATGGGAATGGAAATACGACGCCGTTTAGTTTAGCGGAGATCTGGCAGTTTCCAGCGGCGATTAATGGCGGCGGAGGTGGATTGGGATTAAGGAGGCCGCAGTTTGGTAACGGTTTAGGACAGTTTGGTGAGTTTGGACCCGGTTTGAACCGGGATGGTAATGGACCGGAGTCAAGAGTTGTTTTGAACCATGGTGGTGTTGGTGGTGGTAAGAAGAGACGTGACTCTGAAGATGATTCTGCTAAGTGTGTTTCCACCAGTAATGGCGGTGCCAATGCCGTGGTATTCATATTTTTTCTTTTTTTTTTTAGTTTTTTTTTTTTTTGGTTATATTTGGAAGGAATTCATTGCAGTAACTGTTTGATTAAATAAAGTATAAATTAAATATTAAATATATGTATTTTGGGGAGTGATTAATTGGTTGATTAAGAAAGATGAGTTGTTGTTTTAATGAATATACTTAAAACGGATCTAATTATGTTTTTAATCATTGTATTTTTGGATTTTGTATATCTGCTAAAAATGTGTTTTTTATTTTATTATTGGAAATTTTTTGCAATTTTCCCGCTCAAGATTTTGCTTCATTTTTTTTGGGTACTTAAAAGGAATAAAATAGTGTTGTAAATTCTAATGATGTTTTTAGCAATTTCACAAACTATTTTGCCTATGGAAGTGTAATCTCAAACACTTTACTATTTCACTTTTGATTTTAAAATTGGTATGCAAACTTATTCAAGTTTGGTCGCGATTTCAAGGATTTTGATGTCTTTGCTACAATATAAGGACCAAAATTTTGGCTACTTCGCTCATATTTAAACCCAATTATCTACCGTTTTATGACAATGATTGCAATTCAAAATTTTGTTTCGAACTTCGATGTCTAAATGGTTGTCCTAATTATTCTGGAGAAAAATTCCTTTATTGTAATAATTTAGTTATCTATATGTGTATTTGATGTATTTGGAATTAGTCGGTGTGATTTAATGGAATTATTATTATTTGGATTGTGCAGAATGATAGTGATGGAAAACGGACTAAAGCATCAGGGAACAAGAATGAGGGTGGTGATGGTAAAGTTGAAGGAGAAGTCAGTTCAGGAAAGCATGCGGAGCAAAGCAGTAAGCCACCTCCTTCTGACCCTCCTAAGCAAGATTACATCCATGTTCGAGCTAGAAGGGGTCAAGCTACTGATAGCCACAGTCTTGCAGAACGCGTAATTTACCCTTTACTTACAACTCTTTTAGAAACTCTTATGTTATTGTTTTTAGGTTTTTTTTCTCTGTCTAATTGTTAAGATCAATTTCTTAAGCAAGATAACAATAATTGAGTTGAGAAGCGCCGATGTGGCTGCGCGACATCATAGGTTTTGATAATCAGACATATTTAACCGCACTTCTCAATATCAAGAATTATAACACAATCGTTCCTATGATGTTAAATCTTGTTTAAGGAAAATGTAAATTTATGGTTTTGTTGCGGTTAGAGTCTATGCCTCTGTTTCTAATTGGAATGTTGGTGGACAATAAACAGGCTAGAAGGGAAAAGATTAGTGAAAGGATGAAAATTCTACAGGATTTAGTTCCTGGTTGTAATAAGGTAATGTTTTTACTACCTGTTAATTTTTTCTGCTTTCATATTCACATAAACTGAAATGAAATGAAAATAGTAATAATAATAAACCAAATGAAAGGAAATTACTAAAAGTAGGAAAAACGTGCTACTTGGGCCCATGAAAAGAAAATAACAGTTATGATCTTCCTAATTGTTGGTCAGTTATAATCTCATATTTTCTATGAAATAATAAATTGAGACTTTCTTCAATTTAGGTTATTGGGAAAGCATTGGTGCTTGATGAGATAATTAATTATATTCAATCACTTCAGCGCCAAGTGGAGGTATCTATTCTATTTCTGATTTTGGTATTTAATGAATTATAATCCTTTCAAAATTTATTATGTTTTGAAATTGATTTTTGACGATTGTAATGTTACTTGATGTCACAGTTTTTATCGATGAAACTTGAAGCAGTTAATTCAAGACTCAATACCGGCATTGAAGCCTTTCCTCCAAAAGATGTAAGTGTTAAGCATCCCTTGATTTTTATATTGAAACTCTAATCAAGTTGAAAGCTTGTTTCTACCCTCTTTATTTGTAAATTTTCCTTCTAACAAGACATGGCTCGCATAACTCACGAGTATAGTAGTTCTGGTGATTGCTATGTTGCAAGTATGTATAACAAGGTTGAACCATCTTTTGCAGACATTATTCACGCACAAGATTTTTGTTTCATTTGCAAATTTTGTTGTTGGATACTCTGCAATTTTTGTTGTTGTTGAGTACTTTGATTCAAATGAATGATAGCTTCTCACTAGGTGCTTTTCAGAACTGATTAGTTTAAGAAGCTTGCAACCTCTGGTCTCTGCATAATGGGCGAGAGTATTGAACTCTCAGCCCTTAGATTAATCCAATGTTCAATCTTTAGCTGTAGAGGATAAATATACTTGATTGAGAGGATACAGATTAAAAATTTGGATTAAAATGATTATAAATGATTGATTTAGTTTTTTTATTATTCATCATTGTTTAAAAAACATTGGACTTACAAGACCTAGTTTTTTTCTCTCTTTCCAGTATGGTCAACAAACGTTTGATCTTGCCGGCATGCCATTTGTTTCACAAGCTACAAGAGAGCCAAGCAGAGGTTCTTCACCAGAATGGTTACATATGCAGGTAGGTGGTGGTTTCGAAAGAACGACGTAG
Protein sequence

>MS.gene99984.t1

MDPGAMMNEGSFPNGNGNTTPFSLAEIWQFPAAINGGGGGLGLRRPQFGNGLGQFGEFGPGLNRDGNGPESRVVLNHGGVGGGKKRRDSEDDSAKCVSTSNGGANAVNDSDGKRTKASGNKNEGGDGKVEGEVSSGKHAEQSSKPPPSDPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRLNTGIEAFPPKDYGQQTFDLAGMPFVSQATREPSRGSSPEWLHMQVGGGFERTT