Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180001058.01.T01 | AAK77938.1 | 84.906 | 212 | 7 | 1 | 1 | 187 | 1 | 212 | 1.15E-124 | 360 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180001058.01.T01 | Q0HA25 | 58.537 | 205 | 60 | 1 | 1 | 180 | 1 | 205 | 1.49E-82 | 246 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180001058.01.T01 | Q94FT9 | 84.906 | 212 | 7 | 1 | 1 | 187 | 1 | 212 | 5.48e-125 | 360 |
Gene ID | Type | Classification |
---|---|---|
MsG0180001058.01.T01 | TF | MADS-MIKC |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180001058.01.T01 | MTR_1g029670 | 91.489 | 141 | 12 | 0 | 1 | 141 | 1 | 141 | 4.36e-92 | 266 |
MsG0180001058.01.T01 | MTR_3g088615 | 70.186 | 161 | 46 | 2 | 1 | 159 | 1 | 161 | 4.97e-77 | 228 |
MsG0180001058.01.T01 | MTR_3g113030 | 46.763 | 139 | 74 | 0 | 1 | 139 | 1 | 139 | 2.64e-41 | 139 |
MsG0180001058.01.T01 | MTR_5g021270 | 44.755 | 143 | 75 | 2 | 1 | 139 | 1 | 143 | 7.12e-36 | 125 |
MsG0180001058.01.T01 | MTR_5g021270 | 44.755 | 143 | 75 | 2 | 1 | 139 | 1 | 143 | 7.79e-36 | 125 |
MsG0180001058.01.T01 | MTR_7g075850 | 44.138 | 145 | 77 | 1 | 1 | 141 | 1 | 145 | 2.23e-33 | 119 |
MsG0180001058.01.T01 | MTR_1g038300 | 40.541 | 148 | 78 | 2 | 1 | 139 | 1 | 147 | 2.69e-33 | 119 |
MsG0180001058.01.T01 | MTR_7g016630 | 44.444 | 144 | 76 | 2 | 1 | 141 | 1 | 143 | 7.39e-33 | 118 |
MsG0180001058.01.T01 | MTR_3g452380 | 40.667 | 150 | 82 | 2 | 1 | 145 | 16 | 163 | 3.06e-32 | 116 |
MsG0180001058.01.T01 | MTR_8g033270 | 43.836 | 146 | 75 | 2 | 1 | 141 | 1 | 144 | 3.31e-32 | 116 |
MsG0180001058.01.T01 | MTR_8g097090 | 43.046 | 151 | 71 | 3 | 1 | 141 | 1 | 146 | 1.08e-31 | 115 |
MsG0180001058.01.T01 | MTR_3g005530 | 40.667 | 150 | 82 | 2 | 1 | 145 | 1 | 148 | 2.34e-31 | 113 |
MsG0180001058.01.T01 | MTR_4g109830 | 45.205 | 146 | 74 | 3 | 1 | 141 | 1 | 145 | 2.58e-31 | 113 |
MsG0180001058.01.T01 | MTR_5g046790 | 42.466 | 146 | 78 | 3 | 1 | 141 | 1 | 145 | 3.11e-30 | 110 |
MsG0180001058.01.T01 | MTR_3g084980 | 41.060 | 151 | 74 | 3 | 1 | 141 | 1 | 146 | 6.04e-30 | 110 |
MsG0180001058.01.T01 | MTR_2g017865 | 41.096 | 146 | 79 | 3 | 1 | 141 | 16 | 159 | 6.95e-30 | 110 |
MsG0180001058.01.T01 | MTR_8g087860 | 40.000 | 150 | 83 | 2 | 1 | 145 | 17 | 164 | 7.89e-30 | 110 |
MsG0180001058.01.T01 | MTR_7g016600 | 42.759 | 145 | 78 | 2 | 1 | 141 | 1 | 144 | 9.31e-30 | 110 |
MsG0180001058.01.T01 | MTR_6g464720 | 40.397 | 151 | 83 | 2 | 1 | 145 | 1 | 150 | 1.82e-29 | 109 |
MsG0180001058.01.T01 | MTR_8g066260 | 41.781 | 146 | 79 | 3 | 1 | 141 | 1 | 145 | 3.60e-29 | 108 |
MsG0180001058.01.T01 | MTR_7g075870 | 40.411 | 146 | 81 | 3 | 1 | 141 | 1 | 145 | 3.68e-29 | 107 |
MsG0180001058.01.T01 | MTR_6g015975 | 42.759 | 145 | 78 | 2 | 1 | 141 | 1 | 144 | 7.82e-29 | 107 |
MsG0180001058.01.T01 | MTR_4g109810 | 42.361 | 144 | 79 | 2 | 1 | 141 | 1 | 143 | 9.42e-29 | 107 |
MsG0180001058.01.T01 | MTR_7g075870 | 39.726 | 146 | 81 | 3 | 1 | 141 | 1 | 144 | 1.89e-28 | 105 |
MsG0180001058.01.T01 | MTR_8g033220 | 38.514 | 148 | 81 | 3 | 1 | 141 | 1 | 145 | 5.12e-27 | 102 |
MsG0180001058.01.T01 | MTR_8g033220 | 38.514 | 148 | 81 | 3 | 1 | 141 | 1 | 145 | 6.17e-27 | 102 |
MsG0180001058.01.T01 | MTR_4g102530 | 41.497 | 147 | 77 | 4 | 1 | 141 | 1 | 144 | 9.37e-27 | 101 |
MsG0180001058.01.T01 | MTR_1g101970 | 40.000 | 150 | 82 | 3 | 1 | 144 | 1 | 148 | 1.20e-26 | 100 |
MsG0180001058.01.T01 | MTR_2g009890 | 40.559 | 143 | 79 | 3 | 1 | 139 | 1 | 141 | 1.28e-26 | 102 |
MsG0180001058.01.T01 | MTR_5g046870 | 52.174 | 92 | 39 | 2 | 1 | 92 | 1 | 87 | 2.40e-26 | 97.4 |
MsG0180001058.01.T01 | MTR_1g053070 | 40.127 | 157 | 69 | 4 | 1 | 141 | 1 | 148 | 9.52e-26 | 99.8 |
MsG0180001058.01.T01 | MTR_5g066180 | 41.606 | 137 | 71 | 3 | 1 | 132 | 1 | 133 | 2.59e-25 | 98.2 |
MsG0180001058.01.T01 | MTR_5g032150 | 36.264 | 182 | 101 | 5 | 1 | 170 | 1 | 179 | 1.37e-24 | 96.3 |
MsG0180001058.01.T01 | MTR_5g031000 | 35.099 | 151 | 79 | 3 | 1 | 141 | 1 | 142 | 3.10e-24 | 95.1 |
MsG0180001058.01.T01 | MTR_5g032520 | 35.714 | 182 | 102 | 5 | 1 | 170 | 1 | 179 | 3.67e-24 | 95.1 |
MsG0180001058.01.T01 | MTR_5g031000 | 35.099 | 151 | 79 | 3 | 1 | 141 | 1 | 142 | 4.90e-24 | 95.1 |
MsG0180001058.01.T01 | MTR_0003s0590 | 57.333 | 75 | 30 | 1 | 1 | 75 | 1 | 73 | 4.60e-23 | 92.8 |
MsG0180001058.01.T01 | MTR_2g461710 | 62.712 | 59 | 22 | 0 | 1 | 59 | 1 | 59 | 1.44e-22 | 86.3 |
MsG0180001058.01.T01 | MTR_4g093970 | 37.324 | 142 | 80 | 3 | 1 | 135 | 27 | 166 | 1.86e-22 | 90.9 |
MsG0180001058.01.T01 | MTR_4g036050 | 33.566 | 143 | 88 | 2 | 1 | 137 | 1 | 142 | 7.24e-22 | 87.8 |
MsG0180001058.01.T01 | MTR_4g036050 | 32.877 | 146 | 91 | 2 | 1 | 140 | 1 | 145 | 9.10e-22 | 87.8 |
MsG0180001058.01.T01 | MTR_4g036050 | 33.566 | 143 | 88 | 2 | 1 | 137 | 1 | 142 | 1.06e-21 | 87.8 |
MsG0180001058.01.T01 | MTR_4g036050 | 33.566 | 143 | 88 | 2 | 1 | 137 | 1 | 142 | 1.58e-21 | 87.4 |
MsG0180001058.01.T01 | MTR_4g093030 | 57.627 | 59 | 25 | 0 | 1 | 59 | 1 | 59 | 2.74e-19 | 80.5 |
MsG0180001058.01.T01 | MTR_5g066960 | 55.932 | 59 | 26 | 0 | 1 | 59 | 1 | 59 | 8.68e-19 | 76.6 |
MsG0180001058.01.T01 | MTR_4g084740 | 52.113 | 71 | 33 | 1 | 1 | 71 | 1 | 70 | 3.14e-18 | 80.9 |
MsG0180001058.01.T01 | MTR_5g045560 | 35.484 | 155 | 70 | 5 | 1 | 130 | 8 | 157 | 4.47e-18 | 79.3 |
MsG0180001058.01.T01 | MTR_8g086290 | 48.438 | 64 | 33 | 0 | 2 | 65 | 12 | 75 | 5.46e-18 | 77.8 |
MsG0180001058.01.T01 | MTR_3g102570 | 42.157 | 102 | 57 | 2 | 1 | 101 | 1 | 101 | 6.27e-18 | 80.1 |
MsG0180001058.01.T01 | MTR_3g030770 | 32.215 | 149 | 79 | 4 | 2 | 129 | 9 | 156 | 1.93e-17 | 77.4 |
MsG0180001058.01.T01 | MTR_4g108720 | 38.462 | 104 | 64 | 0 | 1 | 104 | 1 | 104 | 2.25e-17 | 79.0 |
MsG0180001058.01.T01 | MTR_3g052920 | 31.220 | 205 | 111 | 8 | 2 | 184 | 9 | 205 | 2.41e-17 | 77.0 |
MsG0180001058.01.T01 | MTR_1g108510 | 32.215 | 149 | 79 | 4 | 2 | 129 | 9 | 156 | 2.95e-17 | 77.0 |
MsG0180001058.01.T01 | MTR_2g105290 | 46.154 | 65 | 35 | 0 | 1 | 65 | 11 | 75 | 3.49e-17 | 75.5 |
MsG0180001058.01.T01 | MTR_1g054265 | 39.241 | 79 | 46 | 1 | 1 | 79 | 1 | 77 | 1.74e-16 | 73.6 |
MsG0180001058.01.T01 | MTR_4g094632 | 38.261 | 115 | 63 | 3 | 1 | 111 | 1 | 111 | 2.38e-16 | 72.8 |
MsG0180001058.01.T01 | MTR_1g108580 | 32.215 | 149 | 79 | 4 | 2 | 129 | 9 | 156 | 2.76e-16 | 74.3 |
MsG0180001058.01.T01 | MTR_1g012570 | 35.135 | 148 | 76 | 5 | 2 | 129 | 9 | 156 | 3.50e-16 | 73.9 |
MsG0180001058.01.T01 | MTR_4g094638 | 55.000 | 60 | 27 | 0 | 1 | 60 | 1 | 60 | 3.90e-16 | 72.8 |
MsG0180001058.01.T01 | MTR_0121s0080 | 28.922 | 204 | 111 | 8 | 2 | 180 | 7 | 201 | 4.33e-16 | 73.9 |
MsG0180001058.01.T01 | MTR_8g079502 | 41.538 | 65 | 38 | 0 | 1 | 65 | 1 | 65 | 5.10e-16 | 72.4 |
MsG0180001058.01.T01 | MTR_8g043650 | 32.000 | 200 | 108 | 11 | 2 | 180 | 9 | 201 | 7.82e-16 | 73.2 |
MsG0180001058.01.T01 | MTR_5g055100 | 32.000 | 200 | 108 | 8 | 2 | 180 | 9 | 201 | 8.40e-16 | 73.2 |
MsG0180001058.01.T01 | MTR_5g041650 | 34.615 | 104 | 68 | 0 | 1 | 104 | 38 | 141 | 1.00e-15 | 74.3 |
MsG0180001058.01.T01 | MTR_1g047550 | 41.538 | 65 | 38 | 0 | 1 | 65 | 1 | 65 | 1.11e-15 | 71.6 |
MsG0180001058.01.T01 | MTR_1g077360 | 29.843 | 191 | 106 | 6 | 2 | 171 | 9 | 192 | 1.27e-15 | 72.8 |
MsG0180001058.01.T01 | MTR_8g051580 | 45.161 | 62 | 34 | 0 | 1 | 62 | 1 | 62 | 1.61e-15 | 71.2 |
MsG0180001058.01.T01 | MTR_2g085250 | 51.515 | 66 | 31 | 1 | 2 | 66 | 9 | 74 | 1.97e-15 | 72.0 |
MsG0180001058.01.T01 | MTR_2g085280 | 51.515 | 66 | 31 | 1 | 2 | 66 | 9 | 74 | 1.99e-15 | 72.0 |
MsG0180001058.01.T01 | MTR_2g030740 | 29.353 | 201 | 116 | 6 | 2 | 182 | 9 | 203 | 2.60e-15 | 71.6 |
MsG0180001058.01.T01 | MTR_1g075600 | 50.000 | 66 | 32 | 1 | 2 | 66 | 9 | 74 | 2.62e-15 | 71.6 |
MsG0180001058.01.T01 | MTR_1g063160 | 38.462 | 65 | 40 | 0 | 1 | 65 | 1 | 65 | 4.54e-15 | 70.1 |
MsG0180001058.01.T01 | MTR_1g105910 | 48.485 | 66 | 33 | 1 | 2 | 66 | 9 | 74 | 4.65e-15 | 71.2 |
MsG0180001058.01.T01 | MTR_3g052870 | 48.485 | 66 | 33 | 1 | 2 | 66 | 9 | 74 | 7.94e-15 | 70.1 |
MsG0180001058.01.T01 | MTR_1g105920 | 48.485 | 66 | 33 | 1 | 2 | 66 | 9 | 74 | 8.69e-15 | 70.5 |
MsG0180001058.01.T01 | MTR_5g053390 | 51.515 | 66 | 31 | 1 | 2 | 66 | 9 | 74 | 1.18e-14 | 70.1 |
MsG0180001058.01.T01 | MTR_0121s0100 | 49.153 | 59 | 30 | 0 | 2 | 60 | 9 | 67 | 1.20e-14 | 67.8 |
MsG0180001058.01.T01 | MTR_4g131030 | 38.462 | 65 | 40 | 0 | 1 | 65 | 1 | 65 | 1.69e-14 | 69.3 |
MsG0180001058.01.T01 | MTR_1g106070 | 46.970 | 66 | 34 | 1 | 2 | 66 | 9 | 74 | 1.87e-14 | 68.6 |
MsG0180001058.01.T01 | MTR_3g080940 | 31.298 | 131 | 79 | 4 | 1 | 124 | 8 | 134 | 3.33e-14 | 68.2 |
MsG0180001058.01.T01 | MTR_8g046350 | 43.077 | 65 | 37 | 0 | 1 | 65 | 1 | 65 | 3.86e-14 | 67.0 |
MsG0180001058.01.T01 | MTR_2g093190 | 44.286 | 70 | 37 | 1 | 2 | 71 | 9 | 76 | 5.46e-14 | 68.2 |
MsG0180001058.01.T01 | MTR_6g018920 | 27.891 | 147 | 88 | 4 | 1 | 132 | 1 | 144 | 1.57e-13 | 67.8 |
MsG0180001058.01.T01 | MTR_1g041615 | 32.710 | 107 | 61 | 3 | 13 | 117 | 17 | 114 | 2.23e-13 | 64.3 |
MsG0180001058.01.T01 | MTR_7g028448 | 50.000 | 52 | 26 | 0 | 14 | 65 | 24 | 75 | 4.79e-13 | 64.3 |
MsG0180001058.01.T01 | MTR_4g036915 | 50.000 | 52 | 26 | 0 | 14 | 65 | 24 | 75 | 4.79e-13 | 64.3 |
MsG0180001058.01.T01 | MTR_3g031240 | 34.513 | 113 | 64 | 2 | 1 | 103 | 1 | 113 | 6.81e-13 | 64.3 |
MsG0180001058.01.T01 | MTR_3g030780 | 43.939 | 66 | 36 | 1 | 2 | 66 | 9 | 74 | 1.38e-12 | 62.4 |
MsG0180001058.01.T01 | MTR_1g114730 | 26.994 | 163 | 101 | 4 | 1 | 148 | 1 | 160 | 4.32e-12 | 63.9 |
MsG0180001058.01.T01 | MTR_3g067875 | 52.941 | 51 | 24 | 0 | 11 | 61 | 1 | 51 | 8.03e-12 | 58.5 |
MsG0180001058.01.T01 | MTR_6g005440 | 43.548 | 62 | 35 | 0 | 1 | 62 | 1 | 62 | 8.06e-12 | 62.8 |
MsG0180001058.01.T01 | MTR_1g077390 | 30.323 | 155 | 87 | 4 | 1 | 138 | 1 | 151 | 4.33e-11 | 58.9 |
MsG0180001058.01.T01 | MTR_7g062350 | 24.865 | 185 | 111 | 5 | 18 | 181 | 37 | 214 | 6.70e-11 | 59.7 |
MsG0180001058.01.T01 | MTR_1g105905 | 45.614 | 57 | 30 | 1 | 11 | 66 | 1 | 57 | 8.61e-11 | 59.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180001058.01.T01 | AT5G20240 | 50.769 | 195 | 81 | 3 | 1 | 180 | 1 | 195 | 1.39e-62 | 192 |
MsG0180001058.01.T01 | AT5G20240 | 62.590 | 139 | 52 | 0 | 1 | 139 | 1 | 139 | 1.23e-60 | 186 |
MsG0180001058.01.T01 | AT3G54340 | 44.604 | 139 | 77 | 0 | 1 | 139 | 1 | 139 | 5.52e-38 | 130 |
MsG0180001058.01.T01 | AT3G58780 | 41.333 | 150 | 81 | 2 | 1 | 145 | 22 | 169 | 8.34e-34 | 120 |
MsG0180001058.01.T01 | AT3G58780 | 41.333 | 150 | 81 | 2 | 1 | 145 | 16 | 163 | 9.66e-34 | 120 |
MsG0180001058.01.T01 | AT2G42830 | 41.333 | 150 | 81 | 2 | 1 | 145 | 16 | 163 | 9.82e-34 | 120 |
MsG0180001058.01.T01 | AT2G42830 | 41.333 | 150 | 81 | 2 | 1 | 145 | 16 | 163 | 9.98e-34 | 120 |
MsG0180001058.01.T01 | AT5G23260 | 40.559 | 143 | 83 | 1 | 1 | 141 | 17 | 159 | 1.12e-33 | 120 |
MsG0180001058.01.T01 | AT3G58780 | 42.361 | 144 | 76 | 2 | 1 | 139 | 16 | 157 | 1.71e-33 | 120 |
MsG0180001058.01.T01 | AT5G23260 | 39.161 | 143 | 85 | 1 | 1 | 141 | 1 | 143 | 7.60e-33 | 117 |
MsG0180001058.01.T01 | AT5G23260 | 39.716 | 141 | 83 | 1 | 1 | 139 | 1 | 141 | 1.41e-32 | 117 |
MsG0180001058.01.T01 | AT5G13790 | 45.578 | 147 | 67 | 4 | 1 | 141 | 1 | 140 | 1.56e-32 | 117 |
MsG0180001058.01.T01 | AT5G23260 | 39.716 | 141 | 83 | 1 | 1 | 139 | 17 | 157 | 2.52e-32 | 117 |
MsG0180001058.01.T01 | AT3G58780 | 40.972 | 144 | 71 | 2 | 1 | 139 | 16 | 150 | 1.02e-31 | 115 |
MsG0180001058.01.T01 | AT5G60910 | 45.205 | 146 | 74 | 3 | 1 | 141 | 1 | 145 | 1.18e-31 | 115 |
MsG0180001058.01.T01 | AT1G26310 | 43.537 | 147 | 77 | 2 | 1 | 141 | 1 | 147 | 2.54e-31 | 114 |
MsG0180001058.01.T01 | AT5G13790 | 44.444 | 144 | 70 | 3 | 1 | 141 | 1 | 137 | 3.24e-31 | 114 |
MsG0180001058.01.T01 | AT3G02310 | 46.099 | 141 | 70 | 3 | 1 | 136 | 1 | 140 | 8.10e-31 | 111 |
MsG0180001058.01.T01 | AT3G58780 | 36.416 | 173 | 82 | 2 | 1 | 145 | 16 | 188 | 8.17e-31 | 113 |
MsG0180001058.01.T01 | AT3G02310 | 46.099 | 141 | 70 | 3 | 1 | 136 | 1 | 140 | 3.36e-30 | 111 |
MsG0180001058.01.T01 | AT5G15800 | 44.521 | 146 | 75 | 3 | 1 | 141 | 1 | 145 | 3.99e-30 | 111 |
MsG0180001058.01.T01 | AT1G24260 | 42.857 | 147 | 68 | 3 | 1 | 136 | 1 | 142 | 4.12e-30 | 111 |
MsG0180001058.01.T01 | AT1G24260 | 42.568 | 148 | 68 | 3 | 1 | 136 | 1 | 143 | 4.65e-30 | 110 |
MsG0180001058.01.T01 | AT5G15800 | 44.521 | 146 | 75 | 3 | 1 | 141 | 1 | 145 | 4.71e-30 | 111 |
MsG0180001058.01.T01 | AT4G11880 | 42.282 | 149 | 73 | 4 | 1 | 141 | 1 | 144 | 5.45e-30 | 108 |
MsG0180001058.01.T01 | AT4G11880 | 42.282 | 149 | 73 | 4 | 1 | 141 | 1 | 144 | 5.45e-30 | 108 |
MsG0180001058.01.T01 | AT1G24260 | 42.568 | 148 | 68 | 3 | 1 | 136 | 1 | 143 | 6.24e-30 | 110 |
MsG0180001058.01.T01 | AT4G11880 | 42.282 | 149 | 73 | 4 | 1 | 141 | 1 | 144 | 1.02e-29 | 109 |
MsG0180001058.01.T01 | AT4G11880 | 42.282 | 149 | 73 | 4 | 1 | 141 | 1 | 144 | 1.02e-29 | 109 |
MsG0180001058.01.T01 | AT4G09960 | 40.690 | 145 | 79 | 2 | 1 | 140 | 1 | 143 | 1.06e-29 | 109 |
MsG0180001058.01.T01 | AT4G24540 | 42.667 | 150 | 79 | 4 | 1 | 145 | 1 | 148 | 1.08e-29 | 109 |
MsG0180001058.01.T01 | AT4G09960 | 40.411 | 146 | 80 | 2 | 1 | 141 | 1 | 144 | 1.48e-29 | 109 |
MsG0180001058.01.T01 | AT5G51870 | 39.189 | 148 | 80 | 3 | 1 | 141 | 1 | 145 | 1.53e-29 | 107 |
MsG0180001058.01.T01 | AT4G09960 | 40.411 | 146 | 80 | 2 | 1 | 141 | 2 | 145 | 1.64e-29 | 108 |
MsG0180001058.01.T01 | AT3G61120 | 42.857 | 147 | 79 | 2 | 1 | 144 | 1 | 145 | 2.23e-29 | 108 |
MsG0180001058.01.T01 | AT4G09960 | 40.411 | 146 | 80 | 2 | 1 | 141 | 11 | 154 | 2.26e-29 | 108 |
MsG0180001058.01.T01 | AT3G30260 | 38.776 | 147 | 82 | 4 | 1 | 141 | 1 | 145 | 2.77e-29 | 108 |
MsG0180001058.01.T01 | AT2G45660 | 40.411 | 146 | 80 | 2 | 1 | 141 | 1 | 144 | 3.02e-29 | 106 |
MsG0180001058.01.T01 | AT4G09960 | 40.411 | 146 | 80 | 2 | 1 | 141 | 27 | 170 | 3.02e-29 | 108 |
MsG0180001058.01.T01 | AT5G51870 | 39.189 | 148 | 80 | 3 | 1 | 141 | 24 | 168 | 3.67e-29 | 107 |
MsG0180001058.01.T01 | AT1G69120 | 41.781 | 146 | 79 | 3 | 1 | 141 | 1 | 145 | 3.74e-29 | 108 |
MsG0180001058.01.T01 | AT1G69120 | 41.781 | 146 | 79 | 3 | 1 | 141 | 1 | 145 | 6.29e-29 | 108 |
MsG0180001058.01.T01 | AT5G51870 | 38.514 | 148 | 81 | 3 | 1 | 141 | 1 | 145 | 1.71e-28 | 105 |
MsG0180001058.01.T01 | AT2G45650 | 41.216 | 148 | 81 | 2 | 1 | 144 | 1 | 146 | 1.82e-28 | 107 |
MsG0180001058.01.T01 | AT5G51870 | 38.514 | 148 | 81 | 3 | 1 | 141 | 1 | 145 | 2.36e-28 | 105 |
MsG0180001058.01.T01 | AT2G45660 | 40.411 | 146 | 80 | 2 | 1 | 141 | 1 | 144 | 2.57e-28 | 105 |
MsG0180001058.01.T01 | AT5G51870 | 38.514 | 148 | 81 | 3 | 1 | 141 | 11 | 155 | 3.68e-28 | 105 |
MsG0180001058.01.T01 | AT4G09960 | 40.411 | 146 | 80 | 2 | 1 | 141 | 96 | 239 | 4.12e-28 | 107 |
MsG0180001058.01.T01 | AT4G22950 | 40.816 | 147 | 77 | 3 | 1 | 141 | 1 | 143 | 4.35e-28 | 103 |
MsG0180001058.01.T01 | AT4G22950 | 40.816 | 147 | 77 | 3 | 1 | 141 | 1 | 143 | 1.51e-27 | 103 |
MsG0180001058.01.T01 | AT4G22950 | 40.816 | 147 | 77 | 3 | 1 | 141 | 1 | 143 | 1.51e-27 | 103 |
MsG0180001058.01.T01 | AT3G57390 | 37.013 | 154 | 81 | 4 | 1 | 141 | 1 | 151 | 2.64e-27 | 103 |
MsG0180001058.01.T01 | AT3G57230 | 38.095 | 147 | 77 | 3 | 1 | 139 | 1 | 141 | 2.71e-27 | 100 |
MsG0180001058.01.T01 | AT4G18960 | 39.860 | 143 | 79 | 2 | 2 | 139 | 18 | 158 | 2.93e-27 | 103 |
MsG0180001058.01.T01 | AT3G57390 | 37.013 | 154 | 81 | 4 | 1 | 141 | 1 | 151 | 5.58e-27 | 103 |
MsG0180001058.01.T01 | AT3G57230 | 36.842 | 152 | 76 | 3 | 1 | 141 | 1 | 143 | 1.67e-26 | 101 |
MsG0180001058.01.T01 | AT3G57230 | 36.842 | 152 | 76 | 3 | 1 | 141 | 1 | 143 | 1.67e-26 | 101 |
MsG0180001058.01.T01 | AT2G03710 | 37.589 | 141 | 84 | 2 | 1 | 137 | 1 | 141 | 6.83e-26 | 98.6 |
MsG0180001058.01.T01 | AT2G03710 | 37.589 | 141 | 84 | 2 | 1 | 137 | 1 | 141 | 1.78e-25 | 99.4 |
MsG0180001058.01.T01 | AT2G03710 | 37.589 | 141 | 84 | 2 | 1 | 137 | 1 | 141 | 1.88e-25 | 99.4 |
MsG0180001058.01.T01 | AT4G37940 | 32.275 | 189 | 90 | 5 | 1 | 178 | 1 | 162 | 3.52e-25 | 96.3 |
MsG0180001058.01.T01 | AT5G62165 | 38.514 | 148 | 80 | 4 | 1 | 141 | 1 | 144 | 5.37e-25 | 95.5 |
MsG0180001058.01.T01 | AT5G62165 | 38.514 | 148 | 80 | 4 | 1 | 141 | 1 | 144 | 5.37e-25 | 95.5 |
MsG0180001058.01.T01 | AT5G62165 | 38.514 | 148 | 80 | 4 | 1 | 141 | 1 | 144 | 5.37e-25 | 95.5 |
MsG0180001058.01.T01 | AT5G51860 | 36.620 | 142 | 82 | 2 | 1 | 136 | 1 | 140 | 5.56e-25 | 96.7 |
MsG0180001058.01.T01 | AT5G51860 | 36.620 | 142 | 82 | 2 | 1 | 136 | 1 | 140 | 6.21e-25 | 96.7 |
MsG0180001058.01.T01 | AT2G14210 | 38.816 | 152 | 74 | 3 | 1 | 141 | 1 | 144 | 6.28e-25 | 97.4 |
MsG0180001058.01.T01 | AT2G14210 | 38.816 | 152 | 74 | 3 | 1 | 141 | 1 | 144 | 6.62e-25 | 97.4 |
MsG0180001058.01.T01 | AT5G62165 | 38.255 | 149 | 81 | 4 | 1 | 142 | 1 | 145 | 1.87e-24 | 95.1 |
MsG0180001058.01.T01 | AT5G62165 | 38.255 | 149 | 81 | 4 | 1 | 142 | 1 | 145 | 1.87e-24 | 95.1 |
MsG0180001058.01.T01 | AT5G62165 | 39.726 | 146 | 77 | 5 | 1 | 139 | 1 | 142 | 2.50e-24 | 93.6 |
MsG0180001058.01.T01 | AT5G62165 | 39.726 | 146 | 77 | 5 | 1 | 139 | 1 | 142 | 2.50e-24 | 93.6 |
MsG0180001058.01.T01 | AT5G62165 | 39.726 | 146 | 77 | 5 | 1 | 139 | 1 | 142 | 2.50e-24 | 93.6 |
MsG0180001058.01.T01 | AT5G62165 | 39.726 | 146 | 77 | 5 | 1 | 139 | 1 | 142 | 2.50e-24 | 93.6 |
MsG0180001058.01.T01 | AT5G62165 | 39.726 | 146 | 77 | 5 | 1 | 139 | 1 | 142 | 2.50e-24 | 93.6 |
MsG0180001058.01.T01 | AT4G37940 | 34.868 | 152 | 79 | 3 | 1 | 141 | 1 | 143 | 3.61e-24 | 95.1 |
MsG0180001058.01.T01 | AT5G62165 | 38.514 | 148 | 80 | 4 | 1 | 141 | 1 | 144 | 4.20e-24 | 94.4 |
MsG0180001058.01.T01 | AT5G62165 | 38.514 | 148 | 80 | 4 | 1 | 141 | 1 | 144 | 4.20e-24 | 94.4 |
MsG0180001058.01.T01 | AT5G62165 | 38.514 | 148 | 80 | 4 | 1 | 141 | 1 | 144 | 4.20e-24 | 94.4 |
MsG0180001058.01.T01 | AT2G22630 | 37.333 | 150 | 78 | 2 | 1 | 141 | 1 | 143 | 4.95e-24 | 94.7 |
MsG0180001058.01.T01 | AT2G22630 | 37.333 | 150 | 78 | 2 | 1 | 141 | 1 | 143 | 4.95e-24 | 94.7 |
MsG0180001058.01.T01 | AT4G37940 | 35.374 | 147 | 75 | 3 | 1 | 136 | 1 | 138 | 1.41e-23 | 93.2 |
MsG0180001058.01.T01 | AT2G22540 | 37.589 | 141 | 79 | 3 | 1 | 135 | 1 | 138 | 2.83e-23 | 93.2 |
MsG0180001058.01.T01 | AT2G22540 | 37.589 | 141 | 79 | 3 | 1 | 135 | 1 | 138 | 2.83e-23 | 93.2 |
MsG0180001058.01.T01 | AT5G10140 | 36.170 | 141 | 86 | 2 | 1 | 141 | 1 | 137 | 6.54e-23 | 90.1 |
MsG0180001058.01.T01 | AT5G10140 | 36.170 | 141 | 86 | 2 | 1 | 141 | 1 | 137 | 1.22e-22 | 90.1 |
MsG0180001058.01.T01 | AT5G10140 | 36.170 | 141 | 86 | 2 | 1 | 141 | 1 | 137 | 1.26e-22 | 90.1 |
MsG0180001058.01.T01 | AT5G10140 | 36.170 | 141 | 86 | 2 | 1 | 141 | 1 | 137 | 1.35e-22 | 90.1 |
MsG0180001058.01.T01 | AT5G62165 | 54.795 | 73 | 31 | 1 | 1 | 73 | 1 | 71 | 3.17e-22 | 86.7 |
MsG0180001058.01.T01 | AT1G71692 | 50.000 | 76 | 37 | 1 | 1 | 76 | 1 | 75 | 3.72e-22 | 89.4 |
MsG0180001058.01.T01 | AT1G31140 | 33.793 | 145 | 92 | 2 | 1 | 141 | 1 | 145 | 1.07e-20 | 85.9 |
MsG0180001058.01.T01 | AT1G31140 | 35.135 | 148 | 88 | 2 | 1 | 141 | 1 | 147 | 1.39e-20 | 85.5 |
MsG0180001058.01.T01 | AT5G65060 | 34.028 | 144 | 91 | 2 | 1 | 144 | 1 | 140 | 3.82e-20 | 84.0 |
MsG0180001058.01.T01 | AT2G22540 | 35.461 | 141 | 77 | 3 | 1 | 135 | 1 | 133 | 4.04e-20 | 84.7 |
MsG0180001058.01.T01 | AT5G65060 | 34.028 | 144 | 91 | 2 | 1 | 144 | 1 | 140 | 4.47e-20 | 83.6 |
MsG0180001058.01.T01 | AT5G65050 | 27.660 | 188 | 112 | 4 | 1 | 172 | 1 | 180 | 4.44e-18 | 78.2 |
MsG0180001058.01.T01 | AT1G18750 | 36.893 | 103 | 65 | 0 | 1 | 103 | 1 | 103 | 4.75e-18 | 80.9 |
MsG0180001058.01.T01 | AT1G18750 | 36.893 | 103 | 65 | 0 | 1 | 103 | 1 | 103 | 4.94e-18 | 81.3 |
MsG0180001058.01.T01 | AT1G18750 | 36.893 | 103 | 65 | 0 | 1 | 103 | 1 | 103 | 5.41e-18 | 80.9 |
MsG0180001058.01.T01 | AT1G77980 | 49.296 | 71 | 35 | 1 | 1 | 71 | 1 | 70 | 6.61e-18 | 80.1 |
MsG0180001058.01.T01 | AT1G22130 | 49.296 | 71 | 35 | 1 | 1 | 71 | 1 | 70 | 1.37e-17 | 79.3 |
MsG0180001058.01.T01 | AT5G65070 | 43.056 | 72 | 40 | 1 | 1 | 72 | 1 | 71 | 1.39e-17 | 75.9 |
MsG0180001058.01.T01 | AT5G65050 | 32.051 | 156 | 78 | 4 | 1 | 144 | 1 | 140 | 1.42e-17 | 76.6 |
MsG0180001058.01.T01 | AT5G65050 | 31.034 | 145 | 96 | 2 | 1 | 145 | 1 | 141 | 1.72e-17 | 77.0 |
MsG0180001058.01.T01 | AT2G03060 | 34.951 | 103 | 67 | 0 | 1 | 103 | 1 | 103 | 2.40e-17 | 79.0 |
MsG0180001058.01.T01 | AT2G03060 | 34.951 | 103 | 67 | 0 | 1 | 103 | 1 | 103 | 2.61e-17 | 79.0 |
MsG0180001058.01.T01 | AT2G03060 | 34.951 | 103 | 67 | 0 | 1 | 103 | 1 | 103 | 2.61e-17 | 79.0 |
MsG0180001058.01.T01 | AT2G03060 | 34.951 | 103 | 67 | 0 | 1 | 103 | 1 | 103 | 2.61e-17 | 79.0 |
MsG0180001058.01.T01 | AT5G65070 | 43.056 | 72 | 40 | 1 | 1 | 72 | 1 | 71 | 4.03e-17 | 75.9 |
MsG0180001058.01.T01 | AT5G65080 | 30.822 | 146 | 93 | 3 | 1 | 144 | 8 | 147 | 4.74e-17 | 75.5 |
MsG0180001058.01.T01 | AT1G77950 | 49.296 | 71 | 35 | 1 | 1 | 71 | 1 | 70 | 5.42e-17 | 76.6 |
MsG0180001058.01.T01 | AT1G77950 | 49.296 | 71 | 35 | 1 | 1 | 71 | 1 | 70 | 5.42e-17 | 76.6 |
MsG0180001058.01.T01 | AT1G77950 | 49.296 | 71 | 35 | 1 | 1 | 71 | 1 | 70 | 5.42e-17 | 76.6 |
MsG0180001058.01.T01 | AT1G77950 | 49.296 | 71 | 35 | 1 | 1 | 71 | 1 | 70 | 5.42e-17 | 76.6 |
MsG0180001058.01.T01 | AT5G65070 | 43.056 | 72 | 40 | 1 | 1 | 72 | 1 | 71 | 8.32e-17 | 75.9 |
MsG0180001058.01.T01 | AT5G65070 | 43.056 | 72 | 40 | 1 | 1 | 72 | 1 | 71 | 1.01e-16 | 75.1 |
MsG0180001058.01.T01 | AT5G65080 | 29.677 | 155 | 82 | 3 | 1 | 144 | 8 | 146 | 1.44e-16 | 74.7 |
MsG0180001058.01.T01 | AT5G65060 | 33.333 | 144 | 81 | 4 | 1 | 144 | 1 | 129 | 1.79e-16 | 73.9 |
MsG0180001058.01.T01 | AT1G01530 | 47.761 | 67 | 34 | 1 | 1 | 66 | 6 | 72 | 4.50e-16 | 73.9 |
MsG0180001058.01.T01 | AT5G65050 | 41.667 | 72 | 41 | 1 | 1 | 72 | 1 | 71 | 5.65e-16 | 72.4 |
MsG0180001058.01.T01 | AT1G47760 | 37.624 | 101 | 57 | 2 | 1 | 101 | 1 | 95 | 8.97e-16 | 72.0 |
MsG0180001058.01.T01 | AT5G65070 | 47.458 | 59 | 31 | 0 | 1 | 59 | 1 | 59 | 1.16e-15 | 72.8 |
MsG0180001058.01.T01 | AT1G77080 | 34.247 | 146 | 88 | 3 | 1 | 144 | 1 | 140 | 1.53e-15 | 71.2 |
MsG0180001058.01.T01 | AT1G77080 | 34.247 | 146 | 88 | 3 | 1 | 144 | 1 | 140 | 2.21e-15 | 71.2 |
MsG0180001058.01.T01 | AT1G65360 | 45.588 | 68 | 34 | 1 | 1 | 68 | 6 | 70 | 2.27e-15 | 71.6 |
MsG0180001058.01.T01 | AT1G77080 | 34.247 | 146 | 88 | 3 | 1 | 144 | 1 | 140 | 2.31e-15 | 70.9 |
MsG0180001058.01.T01 | AT1G77080 | 34.722 | 144 | 86 | 2 | 1 | 144 | 1 | 136 | 3.94e-15 | 69.3 |
MsG0180001058.01.T01 | AT4G37435 | 37.931 | 116 | 58 | 5 | 1 | 108 | 1 | 110 | 4.54e-15 | 70.1 |
MsG0180001058.01.T01 | AT1G69540 | 35.922 | 103 | 65 | 1 | 1 | 103 | 1 | 102 | 7.53e-15 | 72.0 |
MsG0180001058.01.T01 | AT1G69540 | 35.922 | 103 | 65 | 1 | 1 | 103 | 1 | 102 | 7.77e-15 | 71.6 |
MsG0180001058.01.T01 | AT1G77080 | 34.722 | 144 | 86 | 2 | 1 | 144 | 1 | 136 | 8.01e-15 | 69.7 |
MsG0180001058.01.T01 | AT2G34440 | 39.726 | 73 | 42 | 1 | 1 | 73 | 1 | 71 | 1.61e-14 | 68.6 |
MsG0180001058.01.T01 | AT4G36590 | 44.286 | 70 | 37 | 1 | 2 | 71 | 7 | 74 | 1.13e-13 | 67.4 |
MsG0180001058.01.T01 | AT5G60440 | 37.931 | 87 | 50 | 2 | 2 | 88 | 7 | 89 | 1.90e-13 | 67.4 |
MsG0180001058.01.T01 | AT3G66656 | 37.500 | 72 | 43 | 1 | 1 | 72 | 1 | 70 | 2.01e-13 | 65.5 |
MsG0180001058.01.T01 | AT3G04100 | 33.621 | 116 | 69 | 3 | 2 | 109 | 14 | 129 | 2.34e-13 | 65.9 |
MsG0180001058.01.T01 | AT2G24840 | 42.254 | 71 | 39 | 1 | 1 | 71 | 62 | 130 | 2.65e-13 | 66.6 |
MsG0180001058.01.T01 | AT1G77080 | 30.178 | 169 | 91 | 4 | 1 | 144 | 1 | 167 | 1.76e-12 | 63.9 |
MsG0180001058.01.T01 | AT2G26320 | 39.437 | 71 | 43 | 0 | 1 | 71 | 17 | 87 | 3.96e-12 | 60.5 |
MsG0180001058.01.T01 | AT1G72350 | 50.000 | 56 | 28 | 0 | 2 | 57 | 43 | 98 | 9.72e-12 | 62.0 |
Find 31 sgRNAs with CRISPR-Local
Find 93 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACTATCATCTTTGCTCCTTC+TGG | 0.286754 | 1:-15338837 | MsG0180001058.01.T01:CDS |
AAGAATAATTACGTGGTAGA+AGG | 0.329612 | 1:+15338792 | None:intergenic |
AAGCATCTGGAAAGAGGCTT+TGG | 0.351747 | 1:-15338632 | MsG0180001058.01.T01:CDS |
GGCTGAACACGAAAGGAAAA+TGG | 0.369681 | 1:+15337458 | None:intergenic |
CACGAAAGGAAAATGGCATC+TGG | 0.379047 | 1:+15337465 | None:intergenic |
TTAACCTTATACCTCATGTT+TGG | 0.379567 | 1:+15338605 | None:intergenic |
ATTAAGGTTGATTGATATGC+TGG | 0.409544 | 1:-15338667 | MsG0180001058.01.T01:intron |
CATAAATTTCAGGCACTTGA+AGG | 0.416312 | 1:-15338308 | MsG0180001058.01.T01:intron |
AGCATCTGGAAAGAGGCTTT+GGG | 0.457669 | 1:-15338631 | MsG0180001058.01.T01:CDS |
AATTGCCTACCTGTTTGTTA+CGG | 0.458958 | 1:+15338209 | None:intergenic |
GAGGTAAGATTGAGATCAAG+AGG | 0.465455 | 1:-15338962 | MsG0180001058.01.T01:CDS |
CCTCACTATCCGTAACAAAC+AGG | 0.469974 | 1:-15338218 | MsG0180001058.01.T01:intron |
AGTGGAAGGTGGGAGAGAAA+TGG | 0.475072 | 1:-15337534 | MsG0180001058.01.T01:CDS |
CAAGAAGTTGATGAGCTTCG+AGG | 0.480547 | 1:-15338260 | MsG0180001058.01.T01:CDS |
AAGGATTGAGATATGGGGAG+AGG | 0.503146 | 1:-15338981 | None:intergenic |
AGAAGGAGCAAAGATGATAG+TGG | 0.515974 | 1:+15338839 | None:intergenic |
CAACGTATGGCAGTGGAAGG+TGG | 0.530390 | 1:-15337545 | MsG0180001058.01.T01:CDS |
AGAATAATTACGTGGTAGAA+GGG | 0.550111 | 1:+15338793 | None:intergenic |
CAAGAAAGAGAATGAGGACA+TGG | 0.551639 | 1:-15338415 | MsG0180001058.01.T01:CDS |
AACGTATGGCAGTGGAAGGT+GGG | 0.551647 | 1:-15337544 | MsG0180001058.01.T01:CDS |
ATAAATTTCAGGCACTTGAA+GGG | 0.553185 | 1:-15338307 | MsG0180001058.01.T01:intron |
GAAACTCAAGAAAGAGAATG+AGG | 0.565377 | 1:-15338421 | MsG0180001058.01.T01:CDS |
AGGACATGGAAATTGAGCTC+AGG | 0.575360 | 1:-15338401 | MsG0180001058.01.T01:intron |
AGTAGTGAGTGAAGCTGCAT+AGG | 0.580197 | 1:+15337437 | None:intergenic |
ACGAAAGGAAAATGGCATCT+GGG | 0.585200 | 1:+15337466 | None:intergenic |
GCAGCAACAACGTATGGCAG+TGG | 0.588601 | 1:-15337552 | MsG0180001058.01.T01:CDS |
CTGCATAGGCTGAACACGAA+AGG | 0.591967 | 1:+15337451 | None:intergenic |
CCTGTTTGTTACGGATAGTG+AGG | 0.610217 | 1:+15338218 | None:intergenic |
CAACAACGTATGGCAGTGGA+AGG | 0.619653 | 1:-15337548 | MsG0180001058.01.T01:CDS |
GATGAATTTGATGAGAGTAG+CGG | 0.646695 | 1:-15337503 | MsG0180001058.01.T01:CDS |
GCTTTGGGATGCCAAACATG+AGG | 0.693901 | 1:-15338616 | MsG0180001058.01.T01:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AATTTTTATTTCATGATTTA+TGG | - | Chr1:15337645-15337664 | MsG0180001058.01.T01:intron | 10.0% |
!! | GCTAATTTATTGAATTTAAA+AGG | - | Chr1:15338232-15338251 | MsG0180001058.01.T01:CDS | 15.0% |
!!! | ACATTAGTCATATTTTTTTT+TGG | - | Chr1:15338707-15338726 | MsG0180001058.01.T01:intron | 15.0% |
!!! | ATTTTTGAACATTTTTTTGT+TGG | - | Chr1:15337699-15337718 | MsG0180001058.01.T01:intron | 15.0% |
!!! | GGCTTATTTAATTTATAATA+AGG | + | Chr1:15338041-15338060 | None:intergenic | 15.0% |
!! | AATAGAACAAGTTAGTAATT+AGG | + | Chr1:15338603-15338622 | None:intergenic | 20.0% |
!! | ATTAATGTTATGTTGAACTA+TGG | - | Chr1:15337924-15337943 | MsG0180001058.01.T01:intron | 20.0% |
!! | TATTAGCCAACTATATATAA+TGG | + | Chr1:15338068-15338087 | None:intergenic | 20.0% |
!! | TCTAATTAAATATGCAATTC+TGG | - | Chr1:15338568-15338587 | MsG0180001058.01.T01:intron | 20.0% |
!!! | CTTTTGTCTCTTTTTTTTAA+AGG | + | Chr1:15337879-15337898 | None:intergenic | 20.0% |
!!! | TGTATATTCAAATGTTTTTG+TGG | - | Chr1:15338803-15338822 | MsG0180001058.01.T01:intron | 20.0% |
! | AATTAGCAATGTAGTTAGTT+TGG | + | Chr1:15338219-15338238 | None:intergenic | 25.0% |
! | ACATATTCAAAGAGAAAAAG+TGG | - | Chr1:15337484-15337503 | MsG0180001058.01.T01:CDS | 25.0% |
! | ATTAGAGCTAATCTTGTAAA+AGG | + | Chr1:15338554-15338573 | None:intergenic | 25.0% |
! | CATATTCAAAGAGAAAAAGT+GGG | - | Chr1:15337485-15337504 | MsG0180001058.01.T01:CDS | 25.0% |
! | CCATTTCCATTATATATAGT+TGG | - | Chr1:15338059-15338078 | MsG0180001058.01.T01:intron | 25.0% |
! | TTGAAAAAAATCAACCAATC+AGG | + | Chr1:15338261-15338280 | None:intergenic | 25.0% |
! | TTGGCTAATACATAAATTTC+AGG | - | Chr1:15338078-15338097 | MsG0180001058.01.T01:intron | 25.0% |
!! | CCAACTATATATAATGGAAA+TGG | + | Chr1:15338062-15338081 | None:intergenic | 25.0% |
!! | TTTTGTTGGTCATGAAATTA+AGG | - | Chr1:15337713-15337732 | MsG0180001058.01.T01:intron | 25.0% |
AAGAATAATTACGTGGTAGA+AGG | + | Chr1:15337607-15337626 | None:intergenic | 30.0% | |
AATTTAAAAGGCTACCTGAT+TGG | - | Chr1:15338244-15338263 | MsG0180001058.01.T01:CDS | 30.0% | |
ACTCAAGAAGAATAATTACG+TGG | + | Chr1:15337614-15337633 | None:intergenic | 30.0% | |
AGAATAATTACGTGGTAGAA+GGG | + | Chr1:15337606-15337625 | None:intergenic | 30.0% | |
ATAAATTTCAGGCACTTGAA+GGG | - | Chr1:15338089-15338108 | MsG0180001058.01.T01:intron | 30.0% | |
GAATAATCGTGTAACTCTAA+GGG | - | Chr1:15338320-15338339 | MsG0180001058.01.T01:intron | 30.0% | |
TCTGGTATTTACATTCACTT+CGG | + | Chr1:15338411-15338430 | None:intergenic | 30.0% | |
TGAATAATCGTGTAACTCTA+AGG | - | Chr1:15338319-15338338 | MsG0180001058.01.T01:intron | 30.0% | |
TTAACCTTATACCTCATGTT+TGG | + | Chr1:15337794-15337813 | None:intergenic | 30.0% | |
! | AAGAGACAAAAGTGTGTTAT+AGG | - | Chr1:15337887-15337906 | MsG0180001058.01.T01:intron | 30.0% |
! | AGAGACAAAAGTGTGTTATA+GGG | - | Chr1:15337888-15337907 | MsG0180001058.01.T01:intron | 30.0% |
! | ATTAAGGTTGATTGATATGC+TGG | - | Chr1:15337729-15337748 | MsG0180001058.01.T01:intron | 30.0% |
! | TATTCATGCATTTTTCCAGA+AGG | + | Chr1:15337577-15337596 | None:intergenic | 30.0% |
!! | ACTTTTGTATTTGTTGCAGA+TGG | - | Chr1:15338455-15338474 | MsG0180001058.01.T01:intron | 30.0% |
!!! | TTCGAGGATGTTTTAGAAAA+TGG | - | Chr1:15338152-15338171 | MsG0180001058.01.T01:intron | 30.0% |
!!! | TTTCCTTTTTTGAGAGTTTC+TGG | - | Chr1:15337842-15337861 | MsG0180001058.01.T01:intron | 30.0% |
AAGCCAGAAACTCTCAAAAA+AGG | + | Chr1:15337848-15337867 | None:intergenic | 35.0% | |
ATACATTTCTCTTGACCATC+TGG | + | Chr1:15338488-15338507 | None:intergenic | 35.0% | |
ATTAGATGCATTCACTGATC+TGG | + | Chr1:15338429-15338448 | None:intergenic | 35.0% | |
CATAAATTTCAGGCACTTGA+AGG | - | Chr1:15338088-15338107 | MsG0180001058.01.T01:intron | 35.0% | |
GAAACTCAAGAAAGAGAATG+AGG | - | Chr1:15337975-15337994 | MsG0180001058.01.T01:intron | 35.0% | |
GATGAATTTGATGAGAGTAG+CGG | - | Chr1:15338893-15338912 | MsG0180001058.01.T01:CDS | 35.0% | |
GGTCAAGAGAAATGTATGTT+TGG | - | Chr1:15338491-15338510 | MsG0180001058.01.T01:intron | 35.0% | |
TGCTTATTAGGACAAGATCT+TGG | - | Chr1:15338636-15338655 | MsG0180001058.01.T01:CDS | 35.0% | |
TGTTATGTTGAACTATGGTC+TGG | - | Chr1:15337929-15337948 | MsG0180001058.01.T01:intron | 35.0% | |
TTATTAGGACAAGATCTTGG+AGG | - | Chr1:15338639-15338658 | MsG0180001058.01.T01:CDS | 35.0% | |
TTGCGCACATATTGCTTATT+AGG | - | Chr1:15338624-15338643 | MsG0180001058.01.T01:CDS | 35.0% | |
! | AATTGCCTACCTGTTTGTTA+CGG | + | Chr1:15338190-15338209 | None:intergenic | 35.0% |
! | GGAACTTAATTTTATCCTCC+AGG | - | Chr1:15338672-15338691 | MsG0180001058.01.T01:intron | 35.0% |
ACGAAAGGAAAATGGCATCT+GGG | + | Chr1:15338933-15338952 | None:intergenic | 40.0% | |
ACTATCATCTTTGCTCCTTC+TGG | - | Chr1:15337559-15337578 | MsG0180001058.01.T01:intron | 40.0% | |
ACTATCCGTAACAAACAGGT+AGG | - | Chr1:15338182-15338201 | MsG0180001058.01.T01:intron | 40.0% | |
AGAAGGAGCAAAGATGATAG+TGG | + | Chr1:15337560-15337579 | None:intergenic | 40.0% | |
CAAGAAAGAGAATGAGGACA+TGG | - | Chr1:15337981-15338000 | MsG0180001058.01.T01:intron | 40.0% | |
GAGGTAAGATTGAGATCAAG+AGG | - | Chr1:15337434-15337453 | MsG0180001058.01.T01:CDS | 40.0% | |
GATGCCAAACATGAGGTATA+AGG | - | Chr1:15337787-15337806 | MsG0180001058.01.T01:intron | 40.0% | |
TAATGTCTCAAAGCTGTACC+TGG | + | Chr1:15338693-15338712 | None:intergenic | 40.0% | |
! | TTTTCAGCAGCAACAACGTA+TGG | - | Chr1:15338838-15338857 | MsG0180001058.01.T01:CDS | 40.0% |
!! | ACCAAAAAGCATCTGGAAAG+AGG | - | Chr1:15337758-15337777 | MsG0180001058.01.T01:intron | 40.0% |
!! | GAGAGATACCAAAAAGCATC+TGG | - | Chr1:15337751-15337770 | MsG0180001058.01.T01:intron | 40.0% |
AAGCATCTGGAAAGAGGCTT+TGG | - | Chr1:15337764-15337783 | MsG0180001058.01.T01:intron | 45.0% | |
AGACAAGTCTCGAATCTGAG+AGG | - | Chr1:15338361-15338380 | MsG0180001058.01.T01:intron | 45.0% | |
AGATCTTGGAGGAGGAGAAT+AGG | - | Chr1:15338650-15338669 | MsG0180001058.01.T01:CDS | 45.0% | |
AGCATCTGGAAAGAGGCTTT+GGG | - | Chr1:15337765-15337784 | MsG0180001058.01.T01:intron | 45.0% | |
AGGACATGGAAATTGAGCTC+AGG | - | Chr1:15337995-15338014 | MsG0180001058.01.T01:intron | 45.0% | |
AGTAGTGAGTGAAGCTGCAT+AGG | + | Chr1:15338962-15338981 | None:intergenic | 45.0% | |
CACGAAAGGAAAATGGCATC+TGG | + | Chr1:15338934-15338953 | None:intergenic | 45.0% | |
CATGGAAATTGAGCTCAGGT+AGG | - | Chr1:15337999-15338018 | MsG0180001058.01.T01:intron | 45.0% | |
CCTCACTATCCGTAACAAAC+AGG | - | Chr1:15338178-15338197 | MsG0180001058.01.T01:intron | 45.0% | |
GATCTTGGAGGAGGAGAATA+GGG | - | Chr1:15338651-15338670 | MsG0180001058.01.T01:CDS | 45.0% | |
GGCTGAACACGAAAGGAAAA+TGG | + | Chr1:15338941-15338960 | None:intergenic | 45.0% | |
TTAGGACAAGATCTTGGAGG+AGG | - | Chr1:15338642-15338661 | MsG0180001058.01.T01:CDS | 45.0% | |
! | ACATTCACTTCGGCTTTAGC+AGG | + | Chr1:15338401-15338420 | None:intergenic | 45.0% |
! | CATTCACTTCGGCTTTAGCA+GGG | + | Chr1:15338400-15338419 | None:intergenic | 45.0% |
! | CCTGTTTGTTACGGATAGTG+AGG | + | Chr1:15338181-15338200 | None:intergenic | 45.0% |
! | GCAGATGGAAGTATACCAGA+TGG | - | Chr1:15338470-15338489 | MsG0180001058.01.T01:intron | 45.0% |
! | GCCTCTTTCCAGATGCTTTT+TGG | + | Chr1:15337762-15337781 | None:intergenic | 45.0% |
! | TGTCTTTTTACCACGAGACC+AGG | + | Chr1:15338346-15338365 | None:intergenic | 45.0% |
!! | CAAGAAGTTGATGAGCTTCG+AGG | - | Chr1:15338136-15338155 | MsG0180001058.01.T01:intron | 45.0% |
!! | TATATATATATATATAATGT+TGG | + | Chr1:15338734-15338753 | None:intergenic | 5.0% |
AACGTATGGCAGTGGAAGGT+GGG | - | Chr1:15338852-15338871 | MsG0180001058.01.T01:CDS | 50.0% | |
AGTGGAAGGTGGGAGAGAAA+TGG | - | Chr1:15338862-15338881 | MsG0180001058.01.T01:CDS | 50.0% | |
CAACAACGTATGGCAGTGGA+AGG | - | Chr1:15338848-15338867 | MsG0180001058.01.T01:CDS | 50.0% | |
CTGCATAGGCTGAACACGAA+AGG | + | Chr1:15338948-15338967 | None:intergenic | 50.0% | |
CTTTAGCAGGGCTTGAATCG+GGG | + | Chr1:15338388-15338407 | None:intergenic | 50.0% | |
GCTTTAGCAGGGCTTGAATC+GGG | + | Chr1:15338389-15338408 | None:intergenic | 50.0% | |
TGTCTCAAAGCTGTACCTGG+AGG | + | Chr1:15338690-15338709 | None:intergenic | 50.0% | |
! | ATCGTGTAACTCTAAGGGCC+TGG | - | Chr1:15338325-15338344 | MsG0180001058.01.T01:intron | 50.0% |
! | GGCTTTAGCAGGGCTTGAAT+CGG | + | Chr1:15338390-15338409 | None:intergenic | 50.0% |
!! | GCTTTGGGATGCCAAACATG+AGG | - | Chr1:15337780-15337799 | MsG0180001058.01.T01:intron | 50.0% |
CAACGTATGGCAGTGGAAGG+TGG | - | Chr1:15338851-15338870 | MsG0180001058.01.T01:CDS | 55.0% | |
GCAGCAACAACGTATGGCAG+TGG | - | Chr1:15338844-15338863 | MsG0180001058.01.T01:CDS | 55.0% | |
! | ACTCTAAGGGCCTGGTCTCG+TGG | - | Chr1:15338333-15338352 | MsG0180001058.01.T01:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr1 | gene | 15337427 | 15338991 | 15337427 | ID=MsG0180001058.01;Name=MsG0180001058.01 |
Chr1 | mRNA | 15337427 | 15338991 | 15337427 | ID=MsG0180001058.01.T01;Parent=MsG0180001058.01;Name=MsG0180001058.01.T01;_AED=0.35;_eAED=0.38;_QI=0|0|0|1|1|1|5|0|187 |
Chr1 | exon | 15338804 | 15338991 | 15338804 | ID=MsG0180001058.01.T01:exon:30979;Parent=MsG0180001058.01.T01 |
Chr1 | exon | 15338617 | 15338683 | 15338617 | ID=MsG0180001058.01.T01:exon:30978;Parent=MsG0180001058.01.T01 |
Chr1 | exon | 15338402 | 15338463 | 15338402 | ID=MsG0180001058.01.T01:exon:30977;Parent=MsG0180001058.01.T01 |
Chr1 | exon | 15338219 | 15338318 | 15338219 | ID=MsG0180001058.01.T01:exon:30976;Parent=MsG0180001058.01.T01 |
Chr1 | exon | 15337427 | 15337573 | 15337427 | ID=MsG0180001058.01.T01:exon:30975;Parent=MsG0180001058.01.T01 |
Chr1 | CDS | 15338804 | 15338991 | 15338804 | ID=MsG0180001058.01.T01:cds;Parent=MsG0180001058.01.T01 |
Chr1 | CDS | 15338617 | 15338683 | 15338617 | ID=MsG0180001058.01.T01:cds;Parent=MsG0180001058.01.T01 |
Chr1 | CDS | 15338402 | 15338463 | 15338402 | ID=MsG0180001058.01.T01:cds;Parent=MsG0180001058.01.T01 |
Chr1 | CDS | 15338219 | 15338318 | 15338219 | ID=MsG0180001058.01.T01:cds;Parent=MsG0180001058.01.T01 |
Chr1 | CDS | 15337427 | 15337573 | 15337427 | ID=MsG0180001058.01.T01:cds;Parent=MsG0180001058.01.T01 |
Gene Sequence |
Protein sequence |