AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180001156.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180001156.01.T01 MTR_1g047060 66.327 98 21 2 107 197 1 93 2.19e-35 121
MsG0180001156.01.T01 MTR_2g086880 35.333 150 76 7 2 142 20 157 6.85e-18 82.0
MsG0180001156.01.T01 MTR_2g086880 35.333 150 76 7 2 142 20 157 8.10e-18 82.0
MsG0180001156.01.T01 MTR_6g477900 33.121 157 82 7 1 143 7 154 8.00e-17 77.0
MsG0180001156.01.T01 MTR_5g021710 34.416 154 83 7 1 143 9 155 3.23e-16 76.6
MsG0180001156.01.T01 MTR_8g467490 30.247 162 87 6 2 143 16 171 3.62e-15 73.9
MsG0180001156.01.T01 MTR_8g093790 30.952 168 93 7 1 165 11 158 4.30e-15 71.2
MsG0180001156.01.T01 MTR_2g064090 32.903 155 86 6 1 143 7 155 6.69e-15 72.8
MsG0180001156.01.T01 MTR_1g097300 34.848 132 76 4 2 129 21 146 1.02e-14 72.8
MsG0180001156.01.T01 MTR_4g098630 37.956 137 74 6 1 131 7 138 1.33e-14 71.6
MsG0180001156.01.T01 MTR_4g094302 29.747 158 86 7 1 144 12 158 1.83e-14 69.3
MsG0180001156.01.T01 MTR_5g040420 29.814 161 88 6 2 143 16 170 2.51e-14 71.2
MsG0180001156.01.T01 MTR_5g014300 32.051 156 87 6 1 142 7 157 2.53e-14 71.2
MsG0180001156.01.T01 MTR_8g076110 33.974 156 81 8 1 143 7 153 2.62e-14 70.9
MsG0180001156.01.T01 MTR_4g089135 37.313 134 72 5 1 129 16 142 3.02e-14 70.9
MsG0180001156.01.T01 MTR_4g094302 32.558 129 77 5 1 129 12 130 3.87e-14 67.8
MsG0180001156.01.T01 MTR_3g093050 31.210 157 85 6 1 143 23 170 5.60e-14 70.9
MsG0180001156.01.T01 MTR_3g093050 31.210 157 85 6 1 143 23 170 7.33e-14 70.5
MsG0180001156.01.T01 MTR_4g035590 33.140 172 98 8 1 162 9 173 1.00e-13 69.7
MsG0180001156.01.T01 MTR_1g090720 34.783 161 78 7 2 143 44 196 1.29e-13 69.7
MsG0180001156.01.T01 MTR_6g011860 31.481 162 84 8 2 143 17 171 2.00e-13 68.9
MsG0180001156.01.T01 MTR_4g036030 33.117 154 85 8 1 143 8 154 3.22e-13 68.2
MsG0180001156.01.T01 MTR_8g094580 30.435 161 84 7 1 144 8 157 6.51e-13 66.6
MsG0180001156.01.T01 MTR_4g101680 32.468 154 86 7 1 143 8 154 6.52e-13 67.4
MsG0180001156.01.T01 MTR_1g090723 31.613 155 87 7 2 144 10 157 7.08e-13 67.4
MsG0180001156.01.T01 MTR_1g090723 31.613 155 87 7 2 144 10 157 1.01e-12 67.0
MsG0180001156.01.T01 MTR_1g090723 31.410 156 87 7 2 144 10 158 1.35e-12 66.6
MsG0180001156.01.T01 MTR_3g096920 30.000 160 85 7 1 144 8 156 1.76e-12 65.5
MsG0180001156.01.T01 MTR_5g041940 32.593 135 75 5 1 129 4 128 1.85e-12 65.1
MsG0180001156.01.T01 MTR_0036s0150 30.323 155 89 6 2 144 7 154 2.25e-12 65.9
MsG0180001156.01.T01 MTR_3g088110 31.875 160 82 7 1 144 8 156 3.45e-12 64.7
MsG0180001156.01.T01 MTR_7g100990 32.117 137 79 4 1 131 12 140 3.99e-12 64.7
MsG0180001156.01.T01 MTR_3g096920 32.847 137 75 6 1 131 8 133 5.05e-12 64.3
MsG0180001156.01.T01 MTR_8g023900 34.228 149 82 7 3 142 196 337 5.95e-12 64.7
MsG0180001156.01.T01 MTR_8g023900 30.719 153 88 5 1 142 13 158 6.30e-12 64.7
MsG0180001156.01.T01 MTR_4g075980 32.450 151 85 7 2 143 17 159 1.44e-11 63.2
MsG0180001156.01.T01 MTR_4g081870 31.111 135 77 5 1 129 10 134 1.57e-11 62.8
MsG0180001156.01.T01 MTR_8g023860 30.921 152 89 5 1 143 13 157 3.11e-11 62.4
MsG0180001156.01.T01 MTR_1g069805 29.032 155 87 8 1 143 11 154 4.73e-11 61.2
MsG0180001156.01.T01 MTR_2157s0010 27.811 169 85 8 1 143 9 166 6.28e-11 60.8
MsG0180001156.01.T01 MTR_2g079990 29.936 157 85 7 1 143 17 162 6.47e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180001156.01.T01 AT4G36160 36.076 158 83 7 1 147 15 165 5.66e-19 84.7
MsG0180001156.01.T01 AT4G36160 36.076 158 83 7 1 147 11 161 6.45e-19 84.3
MsG0180001156.01.T01 AT4G36160 36.076 158 83 7 1 147 11 161 6.45e-19 84.3
MsG0180001156.01.T01 AT3G10490 34.078 179 96 7 2 164 29 201 1.22e-17 79.0
MsG0180001156.01.T01 AT5G24590 36.538 156 79 7 1 143 14 162 9.31e-17 78.6
MsG0180001156.01.T01 AT3G49530 33.333 156 84 7 1 143 14 162 1.30e-16 78.2
MsG0180001156.01.T01 AT3G49530 33.333 156 84 7 1 143 14 162 1.36e-16 78.2
MsG0180001156.01.T01 AT2G18060 34.416 154 83 7 1 143 10 156 1.69e-16 77.4
MsG0180001156.01.T01 AT2G18060 34.416 154 83 7 1 143 10 156 1.69e-16 77.4
MsG0180001156.01.T01 AT3G10490 34.270 178 95 7 2 163 29 200 1.87e-16 77.8
MsG0180001156.01.T01 AT1G26870 30.542 203 125 7 2 195 18 213 2.53e-16 77.4
MsG0180001156.01.T01 AT3G17730 31.847 157 84 7 1 143 7 154 6.92e-16 74.3
MsG0180001156.01.T01 AT5G64530 35.878 131 70 4 1 131 4 120 1.31e-15 72.0
MsG0180001156.01.T01 AT5G64530 32.727 165 76 7 1 144 4 154 1.48e-15 72.4
MsG0180001156.01.T01 AT4G17980 33.333 156 85 6 1 142 7 157 1.72e-15 73.6
MsG0180001156.01.T01 AT3G10480 35.256 156 79 7 2 143 29 176 2.03e-15 74.7
MsG0180001156.01.T01 AT3G10480 35.484 155 79 7 2 143 29 175 2.19e-15 74.7
MsG0180001156.01.T01 AT2G27300 31.973 147 85 6 2 142 16 153 3.65e-15 73.6
MsG0180001156.01.T01 AT4G17980 33.333 156 85 6 1 142 7 157 3.68e-15 73.2
MsG0180001156.01.T01 AT1G33060 33.540 161 82 7 1 146 25 175 8.10e-15 73.2
MsG0180001156.01.T01 AT1G33060 33.540 161 82 7 1 146 25 175 8.76e-15 73.2
MsG0180001156.01.T01 AT1G69490 32.075 159 83 7 1 143 10 159 1.22e-14 71.2
MsG0180001156.01.T01 AT3G44290 31.034 145 89 6 2 142 16 153 1.82e-14 70.1
MsG0180001156.01.T01 AT5G22290 33.562 146 85 7 2 142 23 161 1.87e-14 71.6
MsG0180001156.01.T01 AT5G46590 32.903 155 85 6 1 142 7 155 5.83e-14 69.7
MsG0180001156.01.T01 AT3G44290 31.034 145 89 6 2 142 16 153 6.00e-14 70.1
MsG0180001156.01.T01 AT2G24430 31.410 156 85 7 1 143 17 163 7.95e-14 69.7
MsG0180001156.01.T01 AT2G24430 31.410 156 85 7 1 143 17 163 7.95e-14 69.7
MsG0180001156.01.T01 AT1G54330 33.113 151 87 5 1 143 7 151 1.40e-13 68.9
MsG0180001156.01.T01 AT1G32510 32.075 159 87 6 1 142 7 161 2.19e-13 68.2
MsG0180001156.01.T01 AT5G66300 31.210 157 85 7 1 143 13 160 3.96e-13 67.4
MsG0180001156.01.T01 AT5G46590 33.824 136 79 5 1 131 7 136 6.86e-13 66.6
MsG0180001156.01.T01 AT4G10350 34.615 156 82 8 1 143 10 158 1.58e-12 66.2
MsG0180001156.01.T01 AT5G39610 28.931 159 86 7 1 143 21 168 3.05e-12 64.7
MsG0180001156.01.T01 AT5G17260 29.747 158 87 8 1 143 7 155 3.24e-12 65.5
MsG0180001156.01.T01 AT3G04070 32.143 140 78 5 1 131 11 142 4.81e-12 64.7
MsG0180001156.01.T01 AT3G29035 30.216 139 79 5 1 132 25 152 6.26e-12 64.3
MsG0180001156.01.T01 AT3G04070 32.143 140 78 5 1 131 11 142 7.37e-12 64.3
MsG0180001156.01.T01 AT4G27410 30.573 157 84 8 1 143 15 160 9.56e-12 63.5
MsG0180001156.01.T01 AT3G03200 30.380 158 86 8 1 143 7 155 1.03e-11 63.9
MsG0180001156.01.T01 AT1G61110 34.559 136 76 6 1 131 17 144 2.24e-11 62.8
MsG0180001156.01.T01 AT2G02450 31.395 172 92 7 2 159 53 212 3.13e-11 62.4
MsG0180001156.01.T01 AT1G76420 28.750 160 86 7 1 144 23 170 3.46e-11 62.0
MsG0180001156.01.T01 AT5G04395 30.137 146 82 7 1 130 29 170 4.03e-11 60.5
MsG0180001156.01.T01 AT2G02450 31.395 172 92 7 2 159 53 212 4.29e-11 62.0
MsG0180001156.01.T01 AT2G33480 30.128 156 83 6 1 143 16 158 4.89e-11 61.2
MsG0180001156.01.T01 AT1G79580 32.026 153 88 7 1 143 18 164 5.12e-11 61.6
MsG0180001156.01.T01 AT1G79580 32.026 153 88 7 1 143 18 164 5.12e-11 61.6
MsG0180001156.01.T01 AT1G79580 32.026 153 88 7 1 143 18 164 5.12e-11 61.6
MsG0180001156.01.T01 AT1G79580 32.026 153 88 7 1 143 18 164 5.12e-11 61.6
MsG0180001156.01.T01 AT1G79580 32.026 153 88 7 1 143 18 164 5.12e-11 61.6
MsG0180001156.01.T01 AT5G61430 28.931 159 86 7 1 143 17 164 5.35e-11 61.6

Find 58 sgRNAs with CRISPR-Local

Find 74 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGCACTGCAGGACTGGATTT+TGG 0.202792 1:-16651864 MsG0180001156.01.T01:CDS
GGCTATGCTCCACCTGGTGC+TGG 0.290579 1:-16652096 None:intergenic
TCCCTCTTTATGTTCTATCT+TGG 0.300819 1:-16651778 MsG0180001156.01.T01:CDS
CTGGTAGTAGTGATGGTGGT+GGG 0.303392 1:-16651442 MsG0180001156.01.T01:CDS
TGGAGATGACAATGTGGTTT+TGG 0.323180 1:-16651809 MsG0180001156.01.T01:CDS
ATGGATCTGGGTGCAGAGTT+TGG 0.323843 1:-16651527 MsG0180001156.01.T01:CDS
TCCATGGTTCTGACCTCATT+AGG 0.324328 1:-16652002 MsG0180001156.01.T01:CDS
CCATGGTTCTGACCTCATTA+GGG 0.355765 1:-16652001 MsG0180001156.01.T01:CDS
TTGCCCTCCAGCAATGGATC+TGG 0.371581 1:-16651540 MsG0180001156.01.T01:CDS
GGCATTACTCGAGACATTAA+TGG 0.390991 1:-16651832 MsG0180001156.01.T01:CDS
TGATGTCACTCGAAAACTTA+AGG 0.396017 1:-16651480 MsG0180001156.01.T01:CDS
GAGAGACGGCACTGCAGGAC+TGG 0.427179 1:-16651871 MsG0180001156.01.T01:CDS
CCCACTGACGAGATACTTGT+TGG 0.432459 1:-16652066 MsG0180001156.01.T01:CDS
AAAACACGACACACAACAAA+AGG 0.445886 1:+16651566 None:intergenic
GCTGGTAGTAGTGATGGTGG+TGG 0.451886 1:-16651443 MsG0180001156.01.T01:CDS
GATGTCACTCGAAAACTTAA+GGG 0.453296 1:-16651479 MsG0180001156.01.T01:CDS
TCTGCACCCAGATCCATTGC+TGG 0.460133 1:+16651533 None:intergenic
GCTGGGGCTGGTAGTAGTGA+TGG 0.467052 1:-16651449 MsG0180001156.01.T01:CDS
TACTTGTTGGCTACTACCTT+AGG 0.477557 1:-16652053 MsG0180001156.01.T01:CDS
CGATCGGGTCGTACTCATAC+AGG 0.481107 1:+16651971 None:intergenic
GGTGGTGGGGCTGCTGAGCA+AGG 0.481889 1:-16651428 MsG0180001156.01.T01:CDS
TACTGCTTCACTGCCAAAGT+TGG 0.486292 1:-16651898 MsG0180001156.01.T01:CDS
CCGTCTCTCACTGCCAACTT+TGG 0.487719 1:+16651885 None:intergenic
TTCCAAGATAGAACATAAAG+AGG 0.498797 1:+16651776 None:intergenic
AGGACGCTGTCAGAACAAAC+TGG 0.499874 1:-16651744 MsG0180001156.01.T01:CDS
TGGTAGTAGTGATGGTGGTG+GGG 0.505536 1:-16651441 MsG0180001156.01.T01:CDS
TGCCCTCCAGCAATGGATCT+GGG 0.507906 1:-16651539 MsG0180001156.01.T01:CDS
GCTATGCTCCACCTGGTGCT+GGG 0.511329 1:-16652095 None:intergenic
TGCAATGGCTATGCTCCACC+TGG 0.518007 1:-16652102 None:intergenic
GCAGTGAGAGACGGCACTGC+AGG 0.521491 1:-16651876 MsG0180001156.01.T01:CDS
GCCAACAAGTATCTCGTCAG+TGG 0.527034 1:+16652065 None:intergenic
AGAGTCATCACCATCAGATA+AGG 0.531347 1:+16651502 None:intergenic
ATTGTCGATGGTATAGTAGA+AGG 0.534238 1:+16651933 None:intergenic
GTGGGGAGAAACCCAGCACC+AGG 0.542796 1:+16652084 None:intergenic
GAACAGGTTCAGAATTTCCA+TGG 0.547755 1:-16652018 MsG0180001156.01.T01:CDS
GAGGTATATGACAATTCGAT+CGG 0.559279 1:+16651955 None:intergenic
ACAGGTTCAGCTCCCTAATG+AGG 0.565571 1:+16651989 None:intergenic
AGGTATATGACAATTCGATC+GGG 0.576433 1:+16651956 None:intergenic
CCAACAAGTATCTCGTCAGT+GGG 0.578284 1:+16652066 None:intergenic
CTATCTTGGAAATTCTGTGA+AGG 0.589080 1:-16651764 MsG0180001156.01.T01:CDS
GCACCCAGATCCATTGCTGG+AGG 0.602073 1:+16651536 None:intergenic
ACTATACCATCGACAATCGT+AGG 0.602081 1:-16651927 MsG0180001156.01.T01:CDS
GGGGCTGGTAGTAGTGATGG+TGG 0.602818 1:-16651446 MsG0180001156.01.T01:CDS
CCCTAATGAGGTCAGAACCA+TGG 0.604440 1:+16652001 None:intergenic
ATGTCACTCGAAAACTTAAG+GGG 0.610861 1:-16651478 MsG0180001156.01.T01:CDS
ATACAAAGACAGATCAACAA+TGG 0.611512 1:+16651353 None:intergenic
CACCCAGATCCATTGCTGGA+GGG 0.613242 1:+16651537 None:intergenic
GAGTTTGGAGCCTTATCTGA+TGG 0.615510 1:-16651512 MsG0180001156.01.T01:CDS
GTCGATGGTATAGTAGAAGG+AGG 0.618515 1:+16651936 None:intergenic
CCAAAGTTGGCAGTGAGAGA+CGG 0.623168 1:-16651885 MsG0180001156.01.T01:CDS
TCCAAGATAGAACATAAAGA+GGG 0.626576 1:+16651777 None:intergenic
GAATTGCCTACGATTGTCGA+TGG 0.629431 1:+16651921 None:intergenic
GGGAGAAACCCAGCACCAGG+TGG 0.655665 1:+16652087 None:intergenic
GATTATGTACGAGTATGCAT+TGG 0.682043 1:-16651722 MsG0180001156.01.T01:CDS
ATTACTCGAGACATTAATGG+TGG 0.700868 1:-16651829 MsG0180001156.01.T01:CDS
TGTCACTCGAAAACTTAAGG+GGG 0.705876 1:-16651477 MsG0180001156.01.T01:CDS
CAACAAGTATCTCGTCAGTG+GGG 0.741470 1:+16652067 None:intergenic
TAATGGTGGAGATGACAATG+TGG 0.781339 1:-16651815 MsG0180001156.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTATATTATTATTGTGC+AGG - Chr1:16651821-16651840 MsG0180001156.01.T01:CDS 15.0%
ATACAAAGACAGATCAACAA+TGG + Chr1:16652062-16652081 None:intergenic 30.0%
TCCAAGATAGAACATAAAGA+GGG + Chr1:16651638-16651657 None:intergenic 30.0%
TTCCAAGATAGAACATAAAG+AGG + Chr1:16651639-16651658 None:intergenic 30.0%
TTTCACAAATCTCATACATG+AGG + Chr1:16651724-16651743 None:intergenic 30.0%
! ATGGAATATATTTTACCTGC+AGG + Chr1:16652043-16652062 None:intergenic 30.0%
! TCACATTTCACAGATTTTCA+AGG - Chr1:16652014-16652033 MsG0180001156.01.T01:CDS 30.0%
! TGGAATATATTTTACCTGCA+GGG + Chr1:16652042-16652061 None:intergenic 30.0%
AAAACACGACACACAACAAA+AGG + Chr1:16651849-16651868 None:intergenic 35.0%
AGGTATATGACAATTCGATC+GGG + Chr1:16651459-16651478 None:intergenic 35.0%
ATGTCACTCGAAAACTTAAG+GGG - Chr1:16651934-16651953 MsG0180001156.01.T01:CDS 35.0%
ATTACTCGAGACATTAATGG+TGG - Chr1:16651583-16651602 MsG0180001156.01.T01:intron 35.0%
ATTGTCGATGGTATAGTAGA+AGG + Chr1:16651482-16651501 None:intergenic 35.0%
CTATCTTGGAAATTCTGTGA+AGG - Chr1:16651648-16651667 MsG0180001156.01.T01:intron 35.0%
GAGGTATATGACAATTCGAT+CGG + Chr1:16651460-16651479 None:intergenic 35.0%
GATGTCACTCGAAAACTTAA+GGG - Chr1:16651933-16651952 MsG0180001156.01.T01:CDS 35.0%
GATTATGTACGAGTATGCAT+TGG - Chr1:16651690-16651709 MsG0180001156.01.T01:intron 35.0%
TAGGAACAAAAATAGCGAAC+AGG - Chr1:16651378-16651397 MsG0180001156.01.T01:CDS 35.0%
TCCCTCTTTATGTTCTATCT+TGG - Chr1:16651634-16651653 MsG0180001156.01.T01:intron 35.0%
TGATGTCACTCGAAAACTTA+AGG - Chr1:16651932-16651951 MsG0180001156.01.T01:CDS 35.0%
! ACTGGATTTTGGATGAAGAA+GGG - Chr1:16651559-16651578 MsG0180001156.01.T01:CDS 35.0%
!!! GTTCGCTATTTTTGTTCCTA+AGG + Chr1:16651378-16651397 None:intergenic 35.0%
ACTATACCATCGACAATCGT+AGG - Chr1:16651485-16651504 MsG0180001156.01.T01:CDS 40.0%
AGAGTCATCACCATCAGATA+AGG + Chr1:16651913-16651932 None:intergenic 40.0%
GAACAGGTTCAGAATTTCCA+TGG - Chr1:16651394-16651413 MsG0180001156.01.T01:CDS 40.0%
GGCATTACTCGAGACATTAA+TGG - Chr1:16651580-16651599 MsG0180001156.01.T01:intron 40.0%
TGTCACTCGAAAACTTAAGG+GGG - Chr1:16651935-16651954 MsG0180001156.01.T01:CDS 40.0%
! GACTGGATTTTGGATGAAGA+AGG - Chr1:16651558-16651577 MsG0180001156.01.T01:CDS 40.0%
! GGAGATGACAATGTGGTTTT+GGG - Chr1:16651604-16651623 MsG0180001156.01.T01:intron 40.0%
! TAATGGTGGAGATGACAATG+TGG - Chr1:16651597-16651616 MsG0180001156.01.T01:intron 40.0%
! TACTTGTTGGCTACTACCTT+AGG - Chr1:16651359-16651378 MsG0180001156.01.T01:CDS 40.0%
! TGGAGATGACAATGTGGTTT+TGG - Chr1:16651603-16651622 MsG0180001156.01.T01:intron 40.0%
CAACAAGTATCTCGTCAGTG+GGG + Chr1:16651348-16651367 None:intergenic 45.0%
CCAACAAGTATCTCGTCAGT+GGG + Chr1:16651349-16651368 None:intergenic 45.0%
GAATTGCCTACGATTGTCGA+TGG + Chr1:16651494-16651513 None:intergenic 45.0%
GTCGATGGTATAGTAGAAGG+AGG + Chr1:16651479-16651498 None:intergenic 45.0%
TACTGCTTCACTGCCAAAGT+TGG - Chr1:16651514-16651533 MsG0180001156.01.T01:CDS 45.0%
! GAGTTTGGAGCCTTATCTGA+TGG - Chr1:16651900-16651919 MsG0180001156.01.T01:CDS 45.0%
!! CCATGGTTCTGACCTCATTA+GGG - Chr1:16651411-16651430 MsG0180001156.01.T01:CDS 45.0%
!! TCCATGGTTCTGACCTCATT+AGG - Chr1:16651410-16651429 MsG0180001156.01.T01:CDS 45.0%
!! TTTTGATTGCCCTCCAGCAA+TGG - Chr1:16651866-16651885 MsG0180001156.01.T01:CDS 45.0%
ACAGGTTCAGCTCCCTAATG+AGG + Chr1:16651426-16651445 None:intergenic 50.0%
ACTCGAAAACTTAAGGGGGC+TGG - Chr1:16651939-16651958 MsG0180001156.01.T01:CDS 50.0%
AGGACGCTGTCAGAACAAAC+TGG - Chr1:16651668-16651687 MsG0180001156.01.T01:intron 50.0%
ATGGATCTGGGTGCAGAGTT+TGG - Chr1:16651885-16651904 MsG0180001156.01.T01:CDS 50.0%
CCAAAGTTGGCAGTGAGAGA+CGG - Chr1:16651527-16651546 MsG0180001156.01.T01:CDS 50.0%
CCCACTGACGAGATACTTGT+TGG - Chr1:16651346-16651365 MsG0180001156.01.T01:CDS 50.0%
CCCTAATGAGGTCAGAACCA+TGG + Chr1:16651414-16651433 None:intergenic 50.0%
CTCGAAAACTTAAGGGGGCT+GGG - Chr1:16651940-16651959 MsG0180001156.01.T01:CDS 50.0%
GCCAACAAGTATCTCGTCAG+TGG + Chr1:16651350-16651369 None:intergenic 50.0%
TCGAAAACTTAAGGGGGCTG+GGG - Chr1:16651941-16651960 MsG0180001156.01.T01:CDS 50.0%
!! AGATTTTCAAGGCTCCCTGC+AGG - Chr1:16652025-16652044 MsG0180001156.01.T01:CDS 50.0%
!! CTGGTAGTAGTGATGGTGGT+GGG - Chr1:16651970-16651989 MsG0180001156.01.T01:CDS 50.0%
!! TGGTAGTAGTGATGGTGGTG+GGG - Chr1:16651971-16651990 MsG0180001156.01.T01:CDS 50.0%
CACCCAGATCCATTGCTGGA+GGG + Chr1:16651878-16651897 None:intergenic 55.0%
CCGTCTCTCACTGCCAACTT+TGG + Chr1:16651530-16651549 None:intergenic 55.0%
CGATCGGGTCGTACTCATAC+AGG + Chr1:16651444-16651463 None:intergenic 55.0%
TCTGCACCCAGATCCATTGC+TGG + Chr1:16651882-16651901 None:intergenic 55.0%
TGCCCTCCAGCAATGGATCT+GGG - Chr1:16651873-16651892 MsG0180001156.01.T01:CDS 55.0%
TTGCCCTCCAGCAATGGATC+TGG - Chr1:16651872-16651891 MsG0180001156.01.T01:CDS 55.0%
! GGCACTGCAGGACTGGATTT+TGG - Chr1:16651548-16651567 MsG0180001156.01.T01:CDS 55.0%
!! GCTGGTAGTAGTGATGGTGG+TGG - Chr1:16651969-16651988 MsG0180001156.01.T01:CDS 55.0%
AAACTTAAGGGGGCTGGGGC+TGG - Chr1:16651945-16651964 MsG0180001156.01.T01:CDS 60.0%
AACTTAAGGGGGCTGGGGCT+GGG - Chr1:16651946-16651965 MsG0180001156.01.T01:CDS 60.0%
GCACCCAGATCCATTGCTGG+AGG + Chr1:16651879-16651898 None:intergenic 60.0%
! GCTGGGGCTGGTAGTAGTGA+TGG - Chr1:16651963-16651982 MsG0180001156.01.T01:CDS 60.0%
! GGGGCTGGTAGTAGTGATGG+TGG - Chr1:16651966-16651985 MsG0180001156.01.T01:CDS 60.0%
ACTTAAGGGGGCTGGGGCTG+GGG - Chr1:16651947-16651966 MsG0180001156.01.T01:CDS 65.0%
GAGAGACGGCACTGCAGGAC+TGG - Chr1:16651541-16651560 MsG0180001156.01.T01:CDS 65.0%
GCAGTGAGAGACGGCACTGC+AGG - Chr1:16651536-16651555 MsG0180001156.01.T01:CDS 65.0%
GGGAGAAACCCAGCACCAGG+TGG + Chr1:16651328-16651347 None:intergenic 65.0%
GTGGGGAGAAACCCAGCACC+AGG + Chr1:16651331-16651350 None:intergenic 65.0%
!! GGTGGTGGGGCTGCTGAGCA+AGG - Chr1:16651984-16652003 MsG0180001156.01.T01:CDS 70.0%
! AAGGGGGCTGGGGCTGGGGC+TGG - Chr1:16651951-16651970 MsG0180001156.01.T01:CDS 80.0%
Chromosome Type Strat End Strand Name
Chr1 gene 16651325 16652109 16651325 ID=MsG0180001156.01;Name=MsG0180001156.01
Chr1 mRNA 16651325 16652109 16651325 ID=MsG0180001156.01.T01;Parent=MsG0180001156.01;Name=MsG0180001156.01.T01;_AED=0.60;_eAED=0.60;_QI=0|0|0|1|1|0.5|2|0|222
Chr1 exon 16651325 16651591 16651325 ID=MsG0180001156.01.T01:exon:31474;Parent=MsG0180001156.01.T01
Chr1 exon 16651708 16652109 16651708 ID=MsG0180001156.01.T01:exon:31473;Parent=MsG0180001156.01.T01
Chr1 CDS 16651708 16652109 16651708 ID=MsG0180001156.01.T01:cds;Parent=MsG0180001156.01.T01
Chr1 CDS 16651325 16651591 16651325 ID=MsG0180001156.01.T01:cds;Parent=MsG0180001156.01.T01
Gene Sequence

>MsG0180001156.01.T01

CCACCTGGTGCTGGGTTTCTCCCCACTGACGAGATACTTGTTGGCTACTACCTTAGGAACAAAAATAGCGAACAGGTTCAGAATTTCCATGGTTCTGACCTCATTAGGGAGCTGAACCTGTATGAGTACGACCCGATCGAATTGTCATATACCTCCTTCTACTATACCATCGACAATCGTAGGCAATTCTACTGCTTCACTGCCAAAGTTGGCAGTGAGAGACGGCACTGCAGGACTGGATTTTGGATGAAGAAGGGCATTACTCGAGACATTAATGGTGGAGATGACAATGTGGTTTTGGGTCAAAAGTCCCTCTTTATGTTCTATCTTGGAAATTCTGTGAAGGACGCTGTCAGAACAAACTGGATTATGTACGAGTATGCATTGGCTGACAAGCCTCATGCTCCTTTTGTTGTGTGTCGTGTTTTTGATTGCCCTCCAGCAATGGATCTGGGTGCAGAGTTTGGAGCCTTATCTGATGGTGATGACTCTGATGTCACTCGAAAACTTAAGGGGGCTGGGGCTGGGGCTGGTAGTAGTGATGGTGGTGGGGCTGCTGAGCAAGGTGATGCATCACATTTCACAGATTTTCAAGGCTCCCTGCAGGTAAAATATATTCCATTGTTGATCTGTCTTTGTATTTTGTTGTCAAATAGAATTTTAGAATAG
Protein sequence

>MsG0180001156.01.T01

PPGAGFLPTDEILVGYYLRNKNSEQVQNFHGSDLIRELNLYEYDPIELSYTSFYYTIDNRRQFYCFTAKVGSERRHCRTGFWMKKGITRDINGGDDNVVLGQKSLFMFYLGNSVKDAVRTNWIMYEYALADKPHAPFVVCRVFDCPPAMDLGAEFGALSDGDDSDVTRKLKGAGAGAGSSDGGGAAEQGDASHFTDFQGSLQVKYIPLLICLCILLSNRILE*