AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180001329.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180001329.01.T01 MTR_1g035640 69.734 489 51 3 278 734 16 439 0.0 644
MsG0180001329.01.T01 MTR_1g035640 51.220 287 125 4 1 281 1 278 3.73e-85 277
MsG0180001329.01.T01 MTR_1g035570 50.789 317 110 9 1 289 1 299 1.10e-83 271
MsG0180001329.01.T01 MTR_1g035570 45.652 322 132 4 278 560 16 333 1.82e-82 268
MsG0180001329.01.T01 MTR_1g035570 81.579 38 7 0 244 281 356 393 6.82e-12 68.6
MsG0180001329.01.T01 MTR_1g035620 46.309 298 120 9 281 548 23 310 1.10e-73 245
MsG0180001329.01.T01 MTR_1g035620 40.532 301 147 9 1 287 1 283 6.29e-57 200
MsG0180001329.01.T01 MTR_1g050845 47.020 302 111 8 281 555 23 302 2.55e-70 246
MsG0180001329.01.T01 MTR_1g050845 38.870 301 140 9 1 287 1 271 1.39e-47 181
MsG0180001329.01.T01 MTR_1g035650 46.759 216 94 4 1 208 1 203 1.06e-51 179
MsG0180001329.01.T01 MTR_1g035650 49.630 135 63 1 281 415 23 152 2.61e-35 133
MsG0180001329.01.T01 MTR_6g061070 33.623 345 159 9 278 554 29 371 2.89e-42 160
MsG0180001329.01.T01 MTR_6g061070 33.221 298 170 9 14 284 27 322 3.90e-32 131
MsG0180001329.01.T01 MTR_5g044670 27.869 305 169 7 266 523 16 316 9.01e-31 124
MsG0180001329.01.T01 MTR_5g044670 27.491 291 174 8 14 281 25 301 2.57e-22 99.4
MsG0180001329.01.T01 MTR_1g035490 29.643 280 150 6 391 643 52 311 1.99e-29 120
MsG0180001329.01.T01 MTR_1g035490 32.468 154 85 4 136 281 52 194 1.47e-13 73.2
MsG0180001329.01.T01 MTR_1g035490 78.378 37 8 0 245 281 291 327 1.74e-11 66.6
MsG0180001329.01.T01 MTR_7g050710 28.713 303 160 10 259 508 6 305 6.55e-27 112
MsG0180001329.01.T01 MTR_7g050710 29.073 313 162 12 9 281 13 305 1.88e-22 99.4
MsG0180001329.01.T01 MTR_1g035510 39.726 146 82 4 283 428 2 141 9.35e-26 106
MsG0180001329.01.T01 MTR_1g035510 48.315 89 45 1 21 109 2 89 2.20e-21 94.0
MsG0180001329.01.T01 MTR_1g033740 39.474 152 87 3 281 432 36 182 4.01e-25 103
MsG0180001329.01.T01 MTR_1g033740 36.667 150 91 3 14 163 31 176 1.17e-21 94.0
MsG0180001329.01.T01 MTR_7g050560 31.379 290 158 9 281 530 27 315 6.37e-25 106
MsG0180001329.01.T01 MTR_7g050560 27.055 292 178 7 9 281 13 288 3.52e-20 92.4
MsG0180001329.01.T01 MTR_1g035520 28.664 307 161 8 21 281 88 382 8.00e-25 107
MsG0180001329.01.T01 MTR_1g035520 39.024 123 63 2 283 394 88 209 3.67e-19 90.5
MsG0180001329.01.T01 MTR_1g035480 37.419 155 90 3 278 432 28 175 1.95e-24 101
MsG0180001329.01.T01 MTR_1g035480 40.667 150 83 4 14 163 26 169 1.09e-23 99.4
MsG0180001329.01.T01 MTR_3g098790 28.956 297 175 10 9 281 13 297 3.22e-24 104
MsG0180001329.01.T01 MTR_3g098790 29.304 273 146 7 281 508 27 297 2.32e-21 96.3
MsG0180001329.01.T01 MTR_7g050590 28.772 285 152 7 283 516 2 286 6.76e-23 100
MsG0180001329.01.T01 MTR_7g050590 28.671 286 170 10 21 281 2 278 1.37e-19 90.5
MsG0180001329.01.T01 MTR_1g035470 50.562 89 43 1 283 371 2 89 8.70e-23 95.5
MsG0180001329.01.T01 MTR_1g035470 39.316 117 69 2 21 137 2 116 1.92e-19 85.9
MsG0180001329.01.T01 MTR_3g061350 27.055 292 174 10 9 281 12 283 2.74e-22 98.2
MsG0180001329.01.T01 MTR_3g061350 27.437 277 164 10 265 508 11 283 5.76e-19 88.2
MsG0180001329.01.T01 MTR_3g061310 27.055 292 175 10 9 281 12 284 3.19e-22 97.8
MsG0180001329.01.T01 MTR_3g061310 24.910 277 170 8 266 508 12 284 4.54e-20 91.7
MsG0180001329.01.T01 MTR_3g005460 23.792 538 305 18 17 508 37 515 4.66e-22 100
MsG0180001329.01.T01 MTR_8g103940 25.839 298 159 8 266 508 39 329 1.96e-21 99.0
MsG0180001329.01.T01 MTR_8g103940 22.184 293 192 4 14 281 48 329 1.26e-16 84.0
MsG0180001329.01.T01 MTR_1g035500 42.991 107 60 1 265 371 23 128 3.31e-21 92.4
MsG0180001329.01.T01 MTR_1g035500 38.571 140 81 3 14 151 34 170 9.91e-21 90.9
MsG0180001329.01.T01 MTR_6g043890 26.894 264 144 8 281 496 29 291 2.44e-20 93.6
MsG0180001329.01.T01 MTR_6g043890 25.163 306 178 10 13 273 23 322 7.43e-17 83.2
MsG0180001329.01.T01 MTR_7g050580 26.837 313 183 9 260 530 7 315 2.71e-20 92.8
MsG0180001329.01.T01 MTR_7g050580 27.304 293 176 9 9 281 13 288 2.33e-17 84.3
MsG0180001329.01.T01 MTR_3g061340 27.178 287 170 10 9 281 12 273 2.92e-20 92.0
MsG0180001329.01.T01 MTR_3g061340 26.103 272 162 8 266 508 12 273 1.41e-19 89.7
MsG0180001329.01.T01 MTR_3g061320 27.113 284 179 8 9 281 12 278 5.52e-20 91.3
MsG0180001329.01.T01 MTR_3g061320 26.103 272 167 7 266 508 12 278 5.90e-20 91.3
MsG0180001329.01.T01 MTR_4g119990 27.660 282 129 10 281 498 29 299 1.24e-19 92.0
MsG0180001329.01.T01 MTR_4g119990 27.119 295 169 9 9 269 15 297 4.24e-19 90.5
MsG0180001329.01.T01 MTR_3g061370 27.273 297 183 10 1 281 1 280 1.33e-19 90.1
MsG0180001329.01.T01 MTR_3g061370 26.415 265 153 7 281 508 21 280 3.35e-18 85.9
MsG0180001329.01.T01 MTR_1g108780 25.649 308 167 9 277 528 7 308 4.25e-19 91.3
MsG0180001329.01.T01 MTR_1g108780 25.704 284 182 8 20 281 12 288 2.31e-18 89.0
MsG0180001329.01.T01 MTR_3g061290 37.600 125 69 3 266 384 12 133 1.65e-18 85.1
MsG0180001329.01.T01 MTR_3g061290 28.708 209 115 7 9 200 12 203 2.92e-16 78.6
MsG0180001329.01.T01 MTR_7g050720 29.355 310 155 11 260 507 4 311 2.02e-18 87.4
MsG0180001329.01.T01 MTR_7g050720 45.455 99 48 2 9 101 10 108 1.20e-16 82.0
MsG0180001329.01.T01 MTR_3g061330 44.086 93 50 1 281 371 24 116 3.47e-18 85.1
MsG0180001329.01.T01 MTR_3g061330 29.956 227 127 8 9 221 12 220 2.28e-17 82.8
MsG0180001329.01.T01 MTR_1g035460 42.169 83 46 1 21 101 2 84 5.31e-14 75.1
MsG0180001329.01.T01 MTR_1g035460 40.964 83 47 1 283 363 2 84 7.74e-13 71.2
MsG0180001329.01.T01 MTR_3g005490 23.651 241 169 6 276 511 30 260 3.22e-13 70.9
MsG0180001329.01.T01 MTR_1g035540 46.269 67 33 1 475 541 31 94 4.32e-13 67.4
MsG0180001329.01.T01 MTR_7g050640 43.333 90 47 2 18 103 26 115 2.08e-12 64.7
MsG0180001329.01.T01 MTR_7g050640 45.000 80 42 1 281 358 27 106 4.75e-12 63.9
MsG0180001329.01.T01 MTR_3g005420 21.965 519 348 18 17 511 52 537 5.27e-12 69.3
MsG0180001329.01.T01 MTR_3g061220 32.479 117 66 3 9 123 12 117 2.35e-11 62.0
MsG0180001329.01.T01 MTR_3g061220 34.167 120 62 4 266 382 12 117 7.83e-11 60.5
MsG0180001329.01.T01 MTR_4g068320 34.653 101 60 2 7 101 4 104 2.45e-11 67.0
MsG0180001329.01.T01 MTR_3g005480 22.594 239 169 6 276 508 30 258 2.81e-11 65.1
MsG0180001329.01.T01 MTR_1g035440 35.165 91 56 2 14 101 24 114 6.11e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180001329.01.T01 AT3G18990 25.378 331 189 11 7 280 4 333 5.15e-17 84.0
MsG0180001329.01.T01 AT3G18990 35.455 110 69 1 281 388 20 129 1.62e-12 70.1
MsG0180001329.01.T01 AT3G18990 25.369 339 195 11 7 288 4 341 5.33e-17 83.6
MsG0180001329.01.T01 AT3G18990 35.455 110 69 1 281 388 20 129 1.68e-12 70.1
MsG0180001329.01.T01 AT4G01580 29.730 148 92 5 14 159 39 176 9.29e-11 62.4

Find 126 sgRNAs with CRISPR-Local

Find 649 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGAAATATGTGGAGAAATTT+TGG 0.128665 1:+19546912 MsG0180001329.01.T01:CDS
GAACACCATTTGGGAATTTA+AGG 0.129045 1:-19539875 None:intergenic
TATTTCAAGGTTCAGATATT+TGG 0.174943 1:+19540017 MsG0180001329.01.T01:CDS
TATTTCAAGGTTAAGATATT+TGG 0.184615 1:+19547100 MsG0180001329.01.T01:CDS
TCCAAAAGTGCATGCTCTTC+AGG 0.202285 1:+19548640 MsG0180001329.01.T01:CDS
TTTGCAAAGTTTCTGAAATA+TGG 0.203016 1:+19539960 MsG0180001329.01.T01:CDS
CCATGGGAAGCATGCTCTTT+TGG 0.213895 1:-19548995 None:intergenic
CCATGAAGAGCTTGCACTTT+TGG 0.219962 1:-19548832 None:intergenic
TTTGCAAAGTCTCTCAAATA+TGG 0.220809 1:+19547043 MsG0180001329.01.T01:CDS
CCCTGAAGAGCATGCACTTT+TGG 0.229018 1:-19548641 None:intergenic
AAGAACTCACCTGAGAAATT+TGG 0.235140 1:-19540239 None:intergenic
TTTGGGAATTTAAGGAATAT+TGG 0.244109 1:-19539867 None:intergenic
GCATGCACCAAAGAGATTTA+TGG 0.255225 1:+19550502 MsG0180001329.01.T01:intron
CGGAGAGTAATGGAGATATT+TGG 0.255392 1:+19539916 MsG0180001329.01.T01:CDS
TAGAGAATAATGGTGATATT+TGG 0.256711 1:+19546999 MsG0180001329.01.T01:CDS
AGAAGTATGTGGAGAACTTT+TGG 0.262295 1:+19539829 MsG0180001329.01.T01:CDS
TTTGGTAAGTTAAGGAATAT+TGG 0.266731 1:-19546950 None:intergenic
ACACAATACATTCAAGGTTT+TGG 0.282064 1:+19550364 MsG0180001329.01.T01:CDS
AAAATTTGTGGAGTTGAAAA+TGG 0.282812 1:+19550541 MsG0180001329.01.T01:CDS
CCTCTTTCCATAAATCTCTT+TGG 0.284821 1:-19550509 None:intergenic
CTCTGTAGATCATGCAGTTT+TGG 0.291583 1:-19549719 None:intergenic
AAATTTCTCCACATATTTCT+TGG 0.293817 1:-19546909 None:intergenic
AAAGTTCTCCACATACTTCT+TGG 0.303447 1:-19539826 None:intergenic
TTGGGAATTTAAGGAATATT+GGG 0.309746 1:-19539866 None:intergenic
TCTTCTAATTCTATGACTAT+TGG 0.312742 1:+19548104 MsG0180001329.01.T01:CDS
TTGGTAAGTTAAGGAATATT+GGG 0.313398 1:-19546949 None:intergenic
CAATATTATCCTATGAAAAT+CGG 0.320192 1:-19539682 None:intergenic
AGCTTTGGTTGCTCCCTTGA+TGG 0.320574 1:-19542963 None:intergenic
GCTCAAAGGACAAGAAAATA+TGG 0.333444 1:+19540179 MsG0180001329.01.T01:CDS
CTTAGGGTTTGGTCCCTTGT+TGG 0.340353 1:-19548231 None:intergenic
GAACACCATTTGGTAAGTTA+AGG 0.345947 1:-19546958 None:intergenic
CCTTGCAACTTCTTAGGGTT+TGG 0.347894 1:-19548242 None:intergenic
CCAAAAGTGCAAGCTCTTCA+TGG 0.352478 1:+19548832 MsG0180001329.01.T01:CDS
ATATTAATTTCTTTAAGCTT+TGG 0.359515 1:-19542978 None:intergenic
TATAAAGAAGGGATCTCTTC+TGG 0.374152 1:+19548370 MsG0180001329.01.T01:CDS
AATTTACCCTACCGGGTGTT+TGG 0.375647 1:-19550393 None:intergenic
TATAAAGAAGGGATCTCTTA+TGG 0.386855 1:+19548757 MsG0180001329.01.T01:CDS
ATAATTTATTTCTAAAGTAT+TGG 0.389854 1:-19540042 None:intergenic
AATTTCTCCACATATTTCTT+GGG 0.391202 1:-19546908 None:intergenic
GAAGCTCAAATGATAACAAA+TGG 0.392358 1:+19547238 MsG0180001329.01.T01:CDS
AATATTATCCTATGAAAATC+GGG 0.398898 1:-19539681 None:intergenic
AGCTTCAACAACTTCATCAA+TGG 0.407763 1:-19540078 None:intergenic
CCAAAAGTGCATGCTCTTCA+GGG 0.432133 1:+19548641 MsG0180001329.01.T01:CDS
CATTGGTGGATCATATTTCA+AGG 0.436459 1:+19540004 MsG0180001329.01.T01:CDS
AAGTTCTCCACATACTTCTT+GGG 0.445593 1:-19539825 None:intergenic
GATGAAACACAATACATTCA+AGG 0.445828 1:+19550358 MsG0180001329.01.T01:CDS
AAAGAATGCAAAGTGGAGAT+TGG 0.446068 1:+19544250 MsG0180001329.01.T01:CDS
AAATTTGTGGAGTTGAAAAT+GGG 0.447472 1:+19550542 MsG0180001329.01.T01:CDS
GCTTCAACAACTTCATCAAT+GGG 0.455126 1:-19540077 None:intergenic
TATTGGTGGATCATATTTCA+AGG 0.456312 1:+19547087 MsG0180001329.01.T01:CDS
GTTATAGGTTCTCTGAAGGT+TGG 0.464034 1:+19544215 MsG0180001329.01.T01:intron
CCATGACAAGGTTATAAAGA+AGG 0.469658 1:+19548745 MsG0180001329.01.T01:intron
AATACATTGGAGAAACTTGT+AGG 0.470007 1:+19549690 MsG0180001329.01.T01:CDS
CTTGTCCTTTGAGCTTGGGT+GGG 0.470047 1:-19540170 None:intergenic
CAGACACTGGAGAAACTTGT+AGG 0.474334 1:+19548416 MsG0180001329.01.T01:CDS
AATCTTACGCCCATGGCTGC+AGG 0.480071 1:+19540726 MsG0180001329.01.T01:CDS
ATATTCCTTAACTTACCAAA+TGG 0.484275 1:+19546953 MsG0180001329.01.T01:CDS
GACATACCATCCTGCAGCCA+TGG 0.484322 1:-19540736 None:intergenic
TCTTGTCCTTTGAGCTTGGG+TGG 0.484511 1:-19540171 None:intergenic
TTACGCCCATGGTCATATCT+TGG 0.485636 1:+19547881 MsG0180001329.01.T01:CDS
CTCTCTTTAACAACTTCCAC+TGG 0.486015 1:-19540662 None:intergenic
CAGAGGAGGCATGGTTAAGA+AGG 0.489632 1:+19540625 MsG0180001329.01.T01:CDS
CCATGACAAGGTTATAAAGA+AGG 0.491612 1:+19548358 MsG0180001329.01.T01:intron
CCATGACAAGGTTATAAAGA+AGG 0.491612 1:+19548908 MsG0180001329.01.T01:intron
AAGACACTCGAGAAACTTGT+AGG 0.496208 1:+19548612 MsG0180001329.01.T01:CDS
GTTATCATTTGAGCTTCCAT+TGG 0.498272 1:-19547232 None:intergenic
CCGTTACTATTACTCCATCA+AGG 0.499776 1:+19542949 MsG0180001329.01.T01:CDS
ACTATATCCACTTTCATAGC+AGG 0.506832 1:-19548065 None:intergenic
ATATTCCTTAAATTCCCAAA+TGG 0.509356 1:+19539870 MsG0180001329.01.T01:CDS
CCAAAGAGATTTATGGAAAG+AGG 0.511759 1:+19550509 MsG0180001329.01.T01:CDS
AAGACATTGGAGAAACTTGT+AGG 0.516345 1:+19548966 MsG0180001329.01.T01:CDS
AAGACGATGGAGAAACTTGT+AGG 0.516472 1:+19548803 MsG0180001329.01.T01:CDS
TCATACTTGAACAAATTTGA+AGG 0.519341 1:+19548014 MsG0180001329.01.T01:CDS
ATAGTAATAGTGAATAAAAG+TGG 0.519587 1:-19548200 None:intergenic
CTAATTCTATGACTATTGGT+TGG 0.519860 1:+19548108 MsG0180001329.01.T01:CDS
ATGAAAATAGTAATCTAAAG+AGG 0.521196 1:+19549666 MsG0180001329.01.T01:CDS
AAGCTCAAATGATAACAAAT+GGG 0.523055 1:+19547239 MsG0180001329.01.T01:CDS
CATACTTGAACAAATTTGAA+GGG 0.523429 1:+19548015 MsG0180001329.01.T01:CDS
GGGATTGCAAGCTTAAGAGT+TGG 0.529065 1:+19548035 MsG0180001329.01.T01:CDS
ATGATCATGATATTCTAAAG+AGG 0.534079 1:+19548942 MsG0180001329.01.T01:CDS
CATGACAAGGTTATAAAGAA+GGG 0.535216 1:+19548746 MsG0180001329.01.T01:intron
ACTACCCAGCCAAATTTCTC+AGG 0.537063 1:+19540230 MsG0180001329.01.T01:CDS
CATGGTTATAGGTTCTCTGA+AGG 0.540492 1:+19544211 MsG0180001329.01.T01:intron
ATTCTAAAGAGGACAGACAC+TGG 0.547208 1:+19548403 MsG0180001329.01.T01:CDS
CAGCCATGGGCGTAAGATTG+TGG 0.547450 1:-19540722 None:intergenic
ATTCTAAAGAGGAAAGACAT+TGG 0.551775 1:+19548953 MsG0180001329.01.T01:CDS
CATGACAAGGTTATAAAGAA+GGG 0.554767 1:+19548359 MsG0180001329.01.T01:intron
CATGACAAGGTTATAAAGAA+GGG 0.554767 1:+19548909 MsG0180001329.01.T01:intron
ACTCACCTGAGAAATTTGGC+TGG 0.559977 1:-19540235 None:intergenic
GTGATCATGATATTCTAAAG+AGG 0.560187 1:+19548779 MsG0180001329.01.T01:CDS
GTGATCGTGATATTCTAAAG+TGG 0.561806 1:+19548588 MsG0180001329.01.T01:CDS
TTAAAGAAATTAATATCGCA+AGG 0.569842 1:+19542985 MsG0180001329.01.T01:CDS
TACTTTGCAGATGGGGACAG+AGG 0.572166 1:+19540608 MsG0180001329.01.T01:intron
ATAGTAACGGTGAATGAAAG+TGG 0.574816 1:-19542936 None:intergenic
TATGATCTTGAAAAGTTGCA+TGG 0.578670 1:-19547996 None:intergenic
TGCAAGCTTAAGAGTTGGAG+AGG 0.584782 1:+19548040 MsG0180001329.01.T01:CDS
ACATACCATCCTGCAGCCAT+GGG 0.585597 1:-19540735 None:intergenic
CCAAAAGAGCATGCTTCCCA+TGG 0.586590 1:+19548995 MsG0180001329.01.T01:CDS
AGAGGACCCTGCTATGAAAG+TGG 0.587637 1:+19548058 MsG0180001329.01.T01:CDS
CCAAACCCTAAGAAGTTGCA+AGG 0.590895 1:+19548242 MsG0180001329.01.T01:CDS
GAGGATTCCCAAGAAGTATG+TGG 0.591680 1:+19539818 MsG0180001329.01.T01:intron
GTGATCGTGATATTCTAAAG+AGG 0.591830 1:+19548392 MsG0180001329.01.T01:CDS
AATCTAAAGAGGAAATACAT+TGG 0.593113 1:+19549677 MsG0180001329.01.T01:CDS
GAGGATTCCCAAGAAATATG+TGG 0.594786 1:+19546901 MsG0180001329.01.T01:intron
ATGACACAAACTTACGCCCA+TGG 0.594951 1:+19547870 MsG0180001329.01.T01:CDS
TACTATCACTAAATCCAACA+AGG 0.595283 1:+19548217 MsG0180001329.01.T01:CDS
CTCACCTGAGAAATTTGGCT+GGG 0.595952 1:-19540234 None:intergenic
AAAGAAGGAGTTGAAGTGAG+TGG 0.599535 1:+19540113 MsG0180001329.01.T01:CDS
ATTTGTGGAGTTGAAAATGG+GGG 0.600206 1:+19550544 MsG0180001329.01.T01:CDS
CGTTACTATTACTCCATCAA+GGG 0.606445 1:+19542950 MsG0180001329.01.T01:CDS
TTGCCACAATCTTACGCCCA+TGG 0.607348 1:+19540719 MsG0180001329.01.T01:CDS
TTTGGTGAATTCCAAACACC+CGG 0.613257 1:+19550382 MsG0180001329.01.T01:CDS
AGATGGGGACAGAGGAGGCA+TGG 0.613423 1:+19540616 MsG0180001329.01.T01:intron
ATTCATAAAAGAATGCAAAG+TGG 0.613826 1:+19544243 MsG0180001329.01.T01:CDS
AAATACCCACCCAAGCTCAA+AGG 0.617745 1:+19540165 MsG0180001329.01.T01:CDS
CTATATCCACTTTCATAGCA+GGG 0.623870 1:-19548064 None:intergenic
TTTGCAGATGGGGACAGAGG+AGG 0.625560 1:+19540611 MsG0180001329.01.T01:intron
TGATGAGAGTGAAATACCAA+TGG 0.626564 1:+19547216 MsG0180001329.01.T01:CDS
TTACGCCCATGGCTGCAGGA+TGG 0.629278 1:+19540730 MsG0180001329.01.T01:CDS
ATTCTAAAGAGGAAAGACGA+TGG 0.644377 1:+19548790 MsG0180001329.01.T01:CDS
AATTTGTGGAGTTGAAAATG+GGG 0.647144 1:+19550543 MsG0180001329.01.T01:CDS
CCTTGATGGAGTAATAGTAA+CGG 0.655922 1:-19542949 None:intergenic
ACTATCACTAAATCCAACAA+GGG 0.658996 1:+19548218 MsG0180001329.01.T01:CDS
ACTTACCAAGATATGACCAT+GGG 0.667874 1:-19547886 None:intergenic
ATATTATCCTATGAAAATCG+GGG 0.671225 1:-19539680 None:intergenic
TACTTACCAAGATATGACCA+TGG 0.678715 1:-19547887 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTATTTAAAAAAAAAAAAA+AGG - Chr1:19541526-19541545 None:intergenic 0.0%
!! AAAATTAAATCATATTATCA+AGG - Chr1:19542336-19542355 None:intergenic 10.0%
!! AACTAATATTAATCAATTAT+TGG - Chr1:19541378-19541397 None:intergenic 10.0%
!! AACTAATATTTAATCAATTA+TGG - Chr1:19541584-19541603 None:intergenic 10.0%
!! ACAAAATATTTAATAATTCA+AGG + Chr1:19549962-19549981 MsG0180001329.01.T01:intron 10.0%
!! ATATATATGTAACAAATATT+TGG + Chr1:19543982-19544001 MsG0180001329.01.T01:intron 10.0%
!! ATATTTAAAAAATGACTATT+AGG - Chr1:19540475-19540494 None:intergenic 10.0%
!! CTAAATAAAGAAATTAATTA+AGG - Chr1:19548504-19548523 None:intergenic 10.0%
!! TAAAATTTCTTTCAAATTTA+TGG - Chr1:19549257-19549276 None:intergenic 10.0%
!! TATAAAAATATATAACCATT+TGG + Chr1:19550198-19550217 MsG0180001329.01.T01:intron 10.0%
!! TTAATGTAATAAATACATTT+AGG + Chr1:19545325-19545344 MsG0180001329.01.T01:intron 10.0%
!!! AAAAATCTCTAAATTTTTTT+GGG + Chr1:19550079-19550098 MsG0180001329.01.T01:intron 10.0%
!!! AAAATCTCTAATTTTTTTTT+TGG + Chr1:19550125-19550144 MsG0180001329.01.T01:intron 10.0%
!!! AAATCTCTAATTTTTTTTTT+GGG + Chr1:19550126-19550145 MsG0180001329.01.T01:intron 10.0%
!!! AAATTTAGAGATTTTTAAAT+AGG - Chr1:19550075-19550094 None:intergenic 10.0%
!!! AATTAAAATTGTTATTAATC+TGG + Chr1:19549102-19549121 MsG0180001329.01.T01:intron 10.0%
!!! AGAAAAATCTATTTTTATAT+TGG + Chr1:19549859-19549878 MsG0180001329.01.T01:intron 10.0%
!!! ATAATTTATTTCTAAAGTAT+TGG - Chr1:19540045-19540064 None:intergenic 10.0%
!!! ATCATTTTATATTTATTTTG+GGG - Chr1:19541792-19541811 None:intergenic 10.0%
!!! ATTTTAATTTCACAAAAAAA+TGG + Chr1:19543861-19543880 MsG0180001329.01.T01:intron 10.0%
!!! CATTTTTTTAAATTGTTATT+TGG + Chr1:19549579-19549598 MsG0180001329.01.T01:intron 10.0%
!!! CCAAAATATTTTTTTTAATT+TGG + Chr1:19541546-19541565 MsG0180001329.01.T01:intron 10.0%
!!! CCAAATTAAAAAAAATATTT+TGG - Chr1:19541549-19541568 None:intergenic 10.0%
!!! CTATCATTTTATATTTATTT+TGG - Chr1:19541794-19541813 None:intergenic 10.0%
!!! GAAAAATCTATTTTTATATT+GGG + Chr1:19549860-19549879 MsG0180001329.01.T01:intron 10.0%
!!! GAATTATTAAATATTTTGTA+AGG - Chr1:19549961-19549980 None:intergenic 10.0%
!!! TAAAAATCTCTAAATTTTTT+TGG + Chr1:19550078-19550097 MsG0180001329.01.T01:intron 10.0%
!!! TAATAAAATTCATTTTTCAA+AGG - Chr1:19547391-19547410 None:intergenic 10.0%
!!! TATAATATCCTATTTTTATT+GGG - Chr1:19550106-19550125 None:intergenic 10.0%
!!! TATTAATGTTTTTTTTAAGA+CGG - Chr1:19550295-19550314 None:intergenic 10.0%
!!! TTAATTTTTAAATATATTGG+TGG + Chr1:19547073-19547092 MsG0180001329.01.T01:CDS 10.0%
!!! TTATAATATCCTATTTTTAT+TGG - Chr1:19550107-19550126 None:intergenic 10.0%
!! AATCAATTATTGATAAATTC+AGG - Chr1:19543261-19543280 None:intergenic 15.0%
!! AATCAATTATTGGTAAATTA+AGG - Chr1:19541368-19541387 None:intergenic 15.0%
!! AATTTAATTCTTTCTAATTG+GGG - Chr1:19546808-19546827 None:intergenic 15.0%
!! ACAATTTAATTCTTTCTAAT+TGG - Chr1:19546810-19546829 None:intergenic 15.0%
!! ACATTATTTCAAAATCATTA+GGG - Chr1:19543323-19543342 None:intergenic 15.0%
!! ACGATTAATTACATAAAATA+TGG + Chr1:19543653-19543672 MsG0180001329.01.T01:intron 15.0%
!! ACTATTTGAAAAAAATGAAA+AGG + Chr1:19540411-19540430 MsG0180001329.01.T01:intron 15.0%
!! ATATTAATTTCTTTAAGCTT+TGG - Chr1:19542981-19543000 None:intergenic 15.0%
!! ATCAATTATTGATAAATTCA+GGG - Chr1:19543260-19543279 None:intergenic 15.0%
!! ATTACTTGAAATTAAGTTAA+GGG - Chr1:19547484-19547503 None:intergenic 15.0%
!! ATTTGATATTTGAATTTACT+AGG + Chr1:19541156-19541175 MsG0180001329.01.T01:intron 15.0%
!! CAAAAATATAACTTAAAAGT+TGG + Chr1:19548143-19548162 MsG0180001329.01.T01:CDS 15.0%
!! CAAAATATTTAATAGTTCAA+GGG + Chr1:19549518-19549537 MsG0180001329.01.T01:intron 15.0%
!! CAATTTAATTCTTTCTAATT+GGG - Chr1:19546809-19546828 None:intergenic 15.0%
!! CATATTTAAAAAATGACTAT+AGG - Chr1:19540476-19540495 None:intergenic 15.0%
!! CTATTTGAAAAAAATGAAAA+GGG + Chr1:19540412-19540431 MsG0180001329.01.T01:intron 15.0%
!! GTATAAAATTATATATGTTC+AGG - Chr1:19546387-19546406 None:intergenic 15.0%
!! TAAAAAAAAAAAAAAGGTTC+AGG - Chr1:19541732-19541751 None:intergenic 15.0%
!! TAAATTATTGATAAGTTTAG+AGG - Chr1:19549128-19549147 None:intergenic 15.0%
!! TAAGAAACATAAAATTGAAA+AGG - Chr1:19540272-19540291 None:intergenic 15.0%
!! TAATCAATTATGGTAAATTA+AGG - Chr1:19541574-19541593 None:intergenic 15.0%
!! TACATTATTTCAAAATCATT+AGG - Chr1:19543324-19543343 None:intergenic 15.0%
!! TATAAAATGATAGAAACAAA+AGG + Chr1:19541801-19541820 MsG0180001329.01.T01:intron 15.0%
!! TATTACTTGAAATTAAGTTA+AGG - Chr1:19547485-19547504 None:intergenic 15.0%
!! TGAAGAAAATATATATGTTA+GGG - Chr1:19545611-19545630 None:intergenic 15.0%
!! TTAAAAAAAAAAAAAGGTTC+AGG - Chr1:19541521-19541540 None:intergenic 15.0%
!! TTGAAGAAAATATATATGTT+AGG - Chr1:19545612-19545631 None:intergenic 15.0%
!! TTTCTAATATATAAGTTTAG+AGG - Chr1:19549844-19549863 None:intergenic 15.0%
!!! AAACATTTTCAAAGAAATTA+AGG - Chr1:19549468-19549487 None:intergenic 15.0%
!!! AAAGATTTTTAAATATGTCT+TGG - Chr1:19543480-19543499 None:intergenic 15.0%
!!! AGCATTTTTAATAACAAAAA+AGG - Chr1:19541133-19541152 None:intergenic 15.0%
!!! ATATTTGGTTTCAAAAAAAT+TGG + Chr1:19539931-19539950 MsG0180001329.01.T01:CDS 15.0%
!!! ATGAATTTTAAGTTTTTTGA+GGG + Chr1:19547641-19547660 MsG0180001329.01.T01:intron 15.0%
!!! ATTATCAAGGTTTTAAATAA+CGG - Chr1:19542323-19542342 None:intergenic 15.0%
!!! CAACTTTTAAGTTATATTTT+TGG - Chr1:19548145-19548164 None:intergenic 15.0%
!!! CATATCAATAGTTTTTATAT+AGG - Chr1:19550015-19550034 None:intergenic 15.0%
!!! CATTTTTTAAATATGATATG+CGG + Chr1:19541859-19541878 MsG0180001329.01.T01:intron 15.0%
!!! TATTTGGTTTCAAAAAAATT+GGG + Chr1:19539932-19539951 MsG0180001329.01.T01:CDS 15.0%
!!! TCAATAGTATTAAAACATTT+TGG + Chr1:19546588-19546607 MsG0180001329.01.T01:intron 15.0%
!!! TGTTCAACAAAAAATATTTT+GGG + Chr1:19539893-19539912 MsG0180001329.01.T01:CDS 15.0%
!!! TTAAGGATACATTTTTTTTA+GGG - Chr1:19549217-19549236 None:intergenic 15.0%
!!! TTCATGTTTTAATTTTCTTA+TGG - Chr1:19547626-19547645 None:intergenic 15.0%
!!! TTTAAGGATACATTTTTTTA+GGG - Chr1:19549192-19549211 None:intergenic 15.0%
!!! TTTAAGGATACATTTTTTTT+AGG - Chr1:19549218-19549237 None:intergenic 15.0%
!! AAAAACTATTGATATGCTTA+AGG + Chr1:19550019-19550038 MsG0180001329.01.T01:intron 20.0%
!! AAAACTATTGATATGCTTAA+GGG + Chr1:19550020-19550039 MsG0180001329.01.T01:intron 20.0%
!! AAAATATATAACCATTTGGT+TGG + Chr1:19550202-19550221 MsG0180001329.01.T01:intron 20.0%
!! AAATATGAAGAAAAAAGAGA+TGG - Chr1:19543832-19543851 None:intergenic 20.0%
!! AACAAATAATTAGAGATTAG+TGG - Chr1:19542686-19542705 None:intergenic 20.0%
!! AACTCTTTCAAATAGAAAAA+GGG - Chr1:19545800-19545819 None:intergenic 20.0%
!! AATATTATCCTATGAAAATC+GGG - Chr1:19539684-19539703 None:intergenic 20.0%
!! AATTATTACGATAGTATTCA+TGG + Chr1:19544193-19544212 MsG0180001329.01.T01:intron 20.0%
!! AATTGGGATCAATAATAAAT+TGG - Chr1:19541200-19541219 None:intergenic 20.0%
!! ACAAATAATTAGAGATTAGT+GGG - Chr1:19542685-19542704 None:intergenic 20.0%
!! ACAAATTATTGATGTGTTTA+AGG + Chr1:19549376-19549395 MsG0180001329.01.T01:intron 20.0%
!! AGGGTAAATTACATAAAATA+CGG + Chr1:19550406-19550425 MsG0180001329.01.T01:intron 20.0%
!! ATAGTAATAGTGAATAAAAG+TGG - Chr1:19548203-19548222 None:intergenic 20.0%
!! ATCATATAGTAAAAATCCAA+AGG - Chr1:19544511-19544530 None:intergenic 20.0%
!! ATGAAAATAGTAATCTAAAG+AGG + Chr1:19549666-19549685 MsG0180001329.01.T01:CDS 20.0%
!! ATGGTATTTATATTAGATCT+GGG - Chr1:19543722-19543741 None:intergenic 20.0%
!! ATTTAAACTAGAGAAAGATT+TGG - Chr1:19542163-19542182 None:intergenic 20.0%
!! CAAAAATATAACTTACAAGT+TGG + Chr1:19540997-19541016 MsG0180001329.01.T01:intron 20.0%
!! CAATATTATCCTATGAAAAT+CGG - Chr1:19539685-19539704 None:intergenic 20.0%
!! CACTAATCTATAATAAAATG+TGG + Chr1:19547950-19547969 MsG0180001329.01.T01:intron 20.0%
!! CACTAATCTTTAATAAAATG+TGG + Chr1:19540801-19540820 MsG0180001329.01.T01:intron 20.0%
!! GAAAAAATAATTCCTATGTT+TGG + Chr1:19545894-19545913 MsG0180001329.01.T01:intron 20.0%
!! GACAATGTAACATAAAAAAA+GGG - Chr1:19542557-19542576 None:intergenic 20.0%
!! GCAAAATATTTAATAGTTCA+AGG + Chr1:19549517-19549536 MsG0180001329.01.T01:intron 20.0%
!! GGTTTATAAAACAAATGAAA+TGG + Chr1:19545650-19545669 MsG0180001329.01.T01:intron 20.0%
!! TAACCAAAAATATAACTTAC+AGG + Chr1:19540993-19541012 MsG0180001329.01.T01:intron 20.0%
!! TAACTCTTTCAAATAGAAAA+AGG - Chr1:19545801-19545820 None:intergenic 20.0%
!! TATGGTATTTATATTAGATC+TGG - Chr1:19543723-19543742 None:intergenic 20.0%
!! TATTTCAAGGTTAAGATATT+TGG + Chr1:19547100-19547119 MsG0180001329.01.T01:CDS 20.0%
!! TCAAATTATTGATAAGTTCA+AGG + Chr1:19543433-19543452 MsG0180001329.01.T01:intron 20.0%
!! TCTAAAAATGTCTACTAATT+TGG + Chr1:19547914-19547933 MsG0180001329.01.T01:intron 20.0%
!! TGACAATGTAACATAAAAAA+AGG - Chr1:19542558-19542577 None:intergenic 20.0%
!! TGTCATTAAAACTTCAAAAA+GGG - Chr1:19547856-19547875 None:intergenic 20.0%
!! TTAAAGAAATTAATATCGCA+AGG + Chr1:19542985-19543004 MsG0180001329.01.T01:CDS 20.0%
!! TTAAATCTTTCAGTTCAAAA+AGG - Chr1:19549153-19549172 None:intergenic 20.0%
!! TTGAACCTTACAAAATATTT+AGG + Chr1:19549316-19549335 MsG0180001329.01.T01:intron 20.0%
!!! AAACTCTGAAATTAAGTTAA+AGG + Chr1:19547704-19547723 MsG0180001329.01.T01:intron 20.0%
!!! ACATTTTTTTAGGGAATTTA+AGG - Chr1:19549183-19549202 None:intergenic 20.0%
!!! ACTTTTAAATAATTTGCGAA+TGG + Chr1:19549934-19549953 MsG0180001329.01.T01:intron 20.0%
!!! AGATTTGAAACAAAAAAGAA+GGG - Chr1:19547344-19547363 None:intergenic 20.0%
!!! AGTTAATTTGATTGTTAAAG+TGG + Chr1:19545003-19545022 MsG0180001329.01.T01:intron 20.0%
!!! AGTTTTCATTTTTTGAGTAA+TGG + Chr1:19546113-19546132 MsG0180001329.01.T01:intron 20.0%
!!! ATAATGAGAATTTTATTCCT+AGG - Chr1:19546218-19546237 None:intergenic 20.0%
!!! ATTGTTTTGTAATGCTTTTT+CGG + Chr1:19544529-19544548 MsG0180001329.01.T01:intron 20.0%
!!! CAACTTGTAAGTTATATTTT+TGG - Chr1:19540999-19541018 None:intergenic 20.0%
!!! CACATCAATAATTTGTATAT+AGG - Chr1:19549372-19549391 None:intergenic 20.0%
!!! CACATTTTATTAAAGATTAG+TGG - Chr1:19540803-19540822 None:intergenic 20.0%
!!! CATGAATTTTAAGTTTTTTG+AGG + Chr1:19547640-19547659 MsG0180001329.01.T01:intron 20.0%
!!! CTCTTAACTTTTAAATACAT+TGG + Chr1:19539987-19540006 MsG0180001329.01.T01:CDS 20.0%
!!! CTTAATTTCAAGTAATAGTT+TGG + Chr1:19547488-19547507 MsG0180001329.01.T01:intron 20.0%
!!! CTTTTAAATAATTTGCGAAT+GGG + Chr1:19549935-19549954 MsG0180001329.01.T01:intron 20.0%
!!! GAATTCCTAAATATTTTGTA+AGG - Chr1:19549324-19549343 None:intergenic 20.0%
!!! GTGTTCAACAAAAAATATTT+TGG + Chr1:19539892-19539911 MsG0180001329.01.T01:CDS 20.0%
!!! GTTTAAGGATACATTTTTTT+AGG - Chr1:19549193-19549212 None:intergenic 20.0%
!!! GTTTTTTGTTCTTTCTTATT+TGG + Chr1:19543007-19543026 MsG0180001329.01.T01:intron 20.0%
!!! TCAGTAAATAAATTTTTCGT+TGG + Chr1:19549987-19550006 MsG0180001329.01.T01:intron 20.0%
!!! TCATTTCAATTTTGTCTTTT+TGG + Chr1:19547525-19547544 MsG0180001329.01.T01:intron 20.0%
!!! TTAACTTTTAAATACATTGG+TGG + Chr1:19539990-19540009 MsG0180001329.01.T01:CDS 20.0%
!!! TTAATACTATTGACTATTGA+TGG - Chr1:19546581-19546600 None:intergenic 20.0%
!!! TTCATCAACAGATTTTATAT+TGG - Chr1:19547152-19547171 None:intergenic 20.0%
!!! TTGTTTTATAAACCTGTTTT+TGG - Chr1:19545644-19545663 None:intergenic 20.0%
!!! TTTTAAATAAACAAAAAGGG+TGG + Chr1:19541747-19541766 MsG0180001329.01.T01:intron 20.0%
!!! TTTTATATTTATTTTGGGGT+TGG - Chr1:19541788-19541807 None:intergenic 20.0%
!!! TTTTATGTAATTAATCGTAC+CGG - Chr1:19543651-19543670 None:intergenic 20.0%
! AAAAATAGGGATTCTCATTA+TGG - Chr1:19540691-19540710 None:intergenic 25.0%
! AAAATGATAGAAACAAAAGG+AGG + Chr1:19541804-19541823 MsG0180001329.01.T01:intron 25.0%
! AAAATTTGTGGAGTTGAAAA+TGG + Chr1:19550541-19550560 MsG0180001329.01.T01:CDS 25.0%
! AAAGTTAGAAGATTATACCA+TGG - Chr1:19549015-19549034 None:intergenic 25.0%
! AAATGATAGAAACAAAAGGA+GGG + Chr1:19541805-19541824 MsG0180001329.01.T01:intron 25.0%
! AAATTTCTCCACATATTTCT+TGG - Chr1:19546912-19546931 None:intergenic 25.0%
! AAATTTGTGGAGTTGAAAAT+GGG + Chr1:19550542-19550561 MsG0180001329.01.T01:CDS 25.0%
! AAGAATTTAAAGGAACTTCT+AGG + Chr1:19543168-19543187 MsG0180001329.01.T01:intron 25.0%
! AAGCTCAAATGATAACAAAT+GGG + Chr1:19547239-19547258 MsG0180001329.01.T01:CDS 25.0%
! AAGTGGTGAATTTAAATAGA+TGG + Chr1:19545020-19545039 MsG0180001329.01.T01:intron 25.0%
! AAGTTAGAAGATTATACCAT+GGG - Chr1:19549014-19549033 None:intergenic 25.0%
! AATAGAAACAAGATGATATG+TGG - Chr1:19543946-19543965 None:intergenic 25.0%
! AATCTAAAGAGGAAATACAT+TGG + Chr1:19549677-19549696 MsG0180001329.01.T01:CDS 25.0%
! AATTTCTCCACATATTTCTT+GGG - Chr1:19546911-19546930 None:intergenic 25.0%
! ACTTACTTGAAAAAATTCCA+AGG + Chr1:19546155-19546174 MsG0180001329.01.T01:intron 25.0%
! AGATGCTTAGAAATTATATG+AGG - Chr1:19545565-19545584 None:intergenic 25.0%
! ATAATTGAATGGGAAAATGT+TGG - Chr1:19546500-19546519 None:intergenic 25.0%
! ATATTATCCTATGAAAATCG+GGG - Chr1:19539683-19539702 None:intergenic 25.0%
! ATATTCCTTAAATTCCCAAA+TGG + Chr1:19539870-19539889 MsG0180001329.01.T01:CDS 25.0%
! ATATTCCTTAACTTACCAAA+TGG + Chr1:19546953-19546972 MsG0180001329.01.T01:CDS 25.0%
! ATGCTTAGAAATTATATGAG+GGG - Chr1:19545563-19545582 None:intergenic 25.0%
! ATTCATAAAAGAATGCAAAG+TGG + Chr1:19544243-19544262 MsG0180001329.01.T01:CDS 25.0%
! CAAAAAAGAAGGGAAAAAAA+TGG - Chr1:19547334-19547353 None:intergenic 25.0%
! CAAAAATATAACTTACAGGT+TGG + Chr1:19542879-19542898 MsG0180001329.01.T01:intron 25.0%
! CACACTTGAACAAATTTAAA+GGG + Chr1:19540869-19540888 MsG0180001329.01.T01:intron 25.0%
! CAGTGTTCAGTTATTATTTA+TGG + Chr1:19549344-19549363 MsG0180001329.01.T01:intron 25.0%
! CATAAATAATAACTGAACAC+TGG - Chr1:19549346-19549365 None:intergenic 25.0%
! CATACTTGAACAAATTTGAA+GGG + Chr1:19548015-19548034 MsG0180001329.01.T01:CDS 25.0%
! CTAAAAATGTCTCCTAATTT+GGG + Chr1:19540765-19540784 MsG0180001329.01.T01:intron 25.0%
! CTATATATTAACATAGTCAG+TGG - Chr1:19544036-19544055 None:intergenic 25.0%
! GATGCTTAGAAATTATATGA+GGG - Chr1:19545564-19545583 None:intergenic 25.0%
! GCAAACACACATAAATAAAA+CGG - Chr1:19539759-19539778 None:intergenic 25.0%
! GTTTGTTCTATTGTTCTTTA+AGG + Chr1:19544352-19544371 MsG0180001329.01.T01:intron 25.0%
! TAAACCATTATATAGTAGCA+AGG + Chr1:19545469-19545488 MsG0180001329.01.T01:intron 25.0%
! TAATTGAATGGGAAAATGTT+GGG - Chr1:19546499-19546518 None:intergenic 25.0%
! TAGAGAATAATGGTGATATT+TGG + Chr1:19546999-19547018 MsG0180001329.01.T01:CDS 25.0%
! TATTAACTAATGCCCAAATT+AGG - Chr1:19540780-19540799 None:intergenic 25.0%
! TATTCCTTTGTAAGATACAT+GGG - Chr1:19545246-19545265 None:intergenic 25.0%
! TATTTCAAGGTTCAGATATT+TGG + Chr1:19540017-19540036 MsG0180001329.01.T01:CDS 25.0%
! TCAAAGAAATTAAAATCGCA+AGG + Chr1:19541102-19541121 MsG0180001329.01.T01:intron 25.0%
! TCAATTATCTCCATTACAAT+TGG + Chr1:19546512-19546531 MsG0180001329.01.T01:intron 25.0%
! TCATACTTGAACAAATTTGA+AGG + Chr1:19548014-19548033 MsG0180001329.01.T01:CDS 25.0%
! TCTTCTAATTCTATGACTAT+TGG + Chr1:19548104-19548123 MsG0180001329.01.T01:CDS 25.0%
! TGGTATTTATATTAGATCTG+GGG - Chr1:19543721-19543740 None:intergenic 25.0%
! TTCTATTTGAAAGAGTTAAG+CGG + Chr1:19545803-19545822 MsG0180001329.01.T01:intron 25.0%
! TTGGGAATTTAAGGAATATT+GGG - Chr1:19539869-19539888 None:intergenic 25.0%
! TTGGTAAGTTAAGGAATATT+GGG - Chr1:19546952-19546971 None:intergenic 25.0%
! TTTATGTAATTAATCGTACC+GGG - Chr1:19543650-19543669 None:intergenic 25.0%
! TTTGAAAAAAATGAAAAGGG+TGG + Chr1:19540415-19540434 MsG0180001329.01.T01:intron 25.0%
! TTTGGGAATTTAAGGAATAT+TGG - Chr1:19539870-19539889 None:intergenic 25.0%
! TTTGGTAAGTTAAGGAATAT+TGG - Chr1:19546953-19546972 None:intergenic 25.0%
!! AATATATTCCCGATTTTCAT+AGG + Chr1:19546748-19546767 MsG0180001329.01.T01:intron 25.0%
!! AATTAGTAGACCTTTTTAGA+TGG - Chr1:19542620-19542639 None:intergenic 25.0%
!! AATTCTCATTATGATTTTCC+TGG + Chr1:19546226-19546245 MsG0180001329.01.T01:intron 25.0%
!! ACATCAATCTTGAATGTTTT+AGG - Chr1:19543615-19543634 None:intergenic 25.0%
!! AGAAATATGTGGAGAAATTT+TGG + Chr1:19546912-19546931 MsG0180001329.01.T01:CDS 25.0%
!! ATACTTTCAAGATGATTTGT+TGG - Chr1:19543200-19543219 None:intergenic 25.0%
!! ATGATCATGATATTCTAAAG+AGG + Chr1:19548942-19548961 MsG0180001329.01.T01:CDS 25.0%
!! ATTCTCATTATGATTTTCCT+GGG + Chr1:19546227-19546246 MsG0180001329.01.T01:intron 25.0%
!! ATTTTGTGTGTAGAATCAAA+GGG + Chr1:19550326-19550345 MsG0180001329.01.T01:intron 25.0%
!! CAACCTGTAAGTTATATTTT+TGG - Chr1:19542881-19542900 None:intergenic 25.0%
!! CAGATTTGAAACAAAAAAGA+AGG - Chr1:19547345-19547364 None:intergenic 25.0%
!! CATTTTATTCCCATGAAAAA+AGG + Chr1:19545983-19546002 MsG0180001329.01.T01:intron 25.0%
!! CTAAAAAGGTCTACTAATTT+TGG + Chr1:19542621-19542640 MsG0180001329.01.T01:intron 25.0%
!! GTGTCATTAAAACTTCAAAA+AGG - Chr1:19547857-19547876 None:intergenic 25.0%
!! TCTTTAGAAATGTTGACATT+TGG - Chr1:19545377-19545396 None:intergenic 25.0%
!! TGTAATGGAGATAATTGAAT+GGG - Chr1:19546510-19546529 None:intergenic 25.0%
!! TTGTAATGGAGATAATTGAA+TGG - Chr1:19546511-19546530 None:intergenic 25.0%
!! TTTAGATTTTACTATTGCGA+AGG + Chr1:19549768-19549787 MsG0180001329.01.T01:intron 25.0%
!! TTTTATGTAATTTACCCTAC+CGG - Chr1:19550404-19550423 None:intergenic 25.0%
!! TTTTTATATTGGGAAAGAGA+AGG + Chr1:19549870-19549889 MsG0180001329.01.T01:intron 25.0%
!!! ATATTTTGGGTAGAGAATAA+TGG + Chr1:19546989-19547008 MsG0180001329.01.T01:CDS 25.0%
!!! ATTTTTTGTTGAACACCATT+TGG - Chr1:19539888-19539907 None:intergenic 25.0%
!!! CATTTTTTTTAGGGAGTTTA+AGG - Chr1:19549208-19549227 None:intergenic 25.0%
!!! GATATTTTTTGCAATTGAGA+TGG + Chr1:19542065-19542084 MsG0180001329.01.T01:intron 25.0%
!!! GATTAGTGGGATTTTATTTT+TGG - Chr1:19542672-19542691 None:intergenic 25.0%
!!! TAACAAATTAACTCTAAAGC+AGG + Chr1:19547748-19547767 MsG0180001329.01.T01:intron 25.0%
!!! TACTTTCAAGATGATTTGTT+GGG - Chr1:19543199-19543218 None:intergenic 25.0%
!!! TCAACAAAAAATATTTTGGG+CGG + Chr1:19539896-19539915 MsG0180001329.01.T01:CDS 25.0%
!!! TGATATGCGGTTTTAAAAAA+CGG + Chr1:19541872-19541891 MsG0180001329.01.T01:intron 25.0%
!!! TTTCAAGAAGATGATTTGTT+GGG - Chr1:19541300-19541319 None:intergenic 25.0%
!!! TTTGCAAAGTTTCTGAAATA+TGG + Chr1:19539960-19539979 MsG0180001329.01.T01:CDS 25.0%
!!! TTTTTGTTTACTCCGTAAAA+CGG - Chr1:19541958-19541977 None:intergenic 25.0%
!!! TTTTTTGTTGAACACCATTT+GGG - Chr1:19539887-19539906 None:intergenic 25.0%
AAAAACCTTGCAACTTCTTA+GGG - Chr1:19548250-19548269 None:intergenic 30.0%
AAATTCCAAGGAATGAAGAT+AGG + Chr1:19546167-19546186 MsG0180001329.01.T01:intron 30.0%
AACAATAGAACAAACAGCTA+AGG - Chr1:19544347-19544366 None:intergenic 30.0%
AAGGAACAAAAATACATTCC+TGG + Chr1:19545858-19545877 MsG0180001329.01.T01:intron 30.0%
AAGGATTTAAAGGAACTTCT+AGG + Chr1:19541269-19541288 MsG0180001329.01.T01:intron 30.0%
AATACATTGGAGAAACTTGT+AGG + Chr1:19549690-19549709 MsG0180001329.01.T01:CDS 30.0%
AATATGGTTACTATGTTCAG+TGG + Chr1:19543669-19543688 MsG0180001329.01.T01:intron 30.0%
AATCAAATGAATTTCTCACC+TGG - Chr1:19547310-19547329 None:intergenic 30.0%
AATGATAGAAACAAAAGGAG+GGG + Chr1:19541806-19541825 MsG0180001329.01.T01:intron 30.0%
AATGCCTTGCTACTATATAA+TGG - Chr1:19545476-19545495 None:intergenic 30.0%
AATTACCAGGTTATAAGGAA+GGG + Chr1:19543115-19543134 MsG0180001329.01.T01:intron 30.0%
AATTCCTATGTTTGGTAGAA+AGG + Chr1:19545902-19545921 MsG0180001329.01.T01:intron 30.0%
AATTGAATGGGAAAATGTTG+GGG - Chr1:19546498-19546517 None:intergenic 30.0%
AATTTCACAAAAAAATGGCC+AGG + Chr1:19543866-19543885 MsG0180001329.01.T01:intron 30.0%
AATTTCTTTCATCCATGACA+AGG + Chr1:19548733-19548752 MsG0180001329.01.T01:intron 30.0%
AATTTCTTTGATCCATGACA+AGG + Chr1:19548542-19548561 MsG0180001329.01.T01:intron 30.0%
AATTTGTGGAGTTGAAAATG+GGG + Chr1:19550543-19550562 MsG0180001329.01.T01:CDS 30.0%
ACAATAGAACAAACAGCTAA+GGG - Chr1:19544346-19544365 None:intergenic 30.0%
ACGATAGTATTCATGGTTAT+AGG + Chr1:19544200-19544219 MsG0180001329.01.T01:intron 30.0%
ACTATCACTAAATCCAACAA+GGG + Chr1:19548218-19548237 MsG0180001329.01.T01:CDS 30.0%
AGCCTACAAAAATTGACATT+TGG - Chr1:19550266-19550285 None:intergenic 30.0%
AGGAACAAAAATACATTCCT+GGG + Chr1:19545859-19545878 MsG0180001329.01.T01:intron 30.0%
AGGAACAAAATAATATGCCT+AGG + Chr1:19545922-19545941 MsG0180001329.01.T01:intron 30.0%
AGTATATTACTTTGCAGGTA+GGG + Chr1:19542454-19542473 MsG0180001329.01.T01:intron 30.0%
ATAGTAACGGTAAATGAAAG+TGG - Chr1:19541057-19541076 None:intergenic 30.0%
ATATGGCAAGAGAAAAATAG+TGG + Chr1:19540196-19540215 MsG0180001329.01.T01:CDS 30.0%
ATCAAATGAATTTCTCACCT+GGG - Chr1:19547309-19547328 None:intergenic 30.0%
ATCTTGACAAAATATTTGGG+GGG - Chr1:19544010-19544029 None:intergenic 30.0%
ATGAAGAAAAAAGAGATGGA+AGG - Chr1:19543828-19543847 None:intergenic 30.0%
ATTTCTTTATAACCTGGACA+TGG - Chr1:19549635-19549654 None:intergenic 30.0%
CAAAAAGGGATTCTCATTAT+TGG - Chr1:19547842-19547861 None:intergenic 30.0%
CAATTACCAGGTATAAAGAA+GGG + Chr1:19541215-19541234 MsG0180001329.01.T01:intron 30.0%
CACGAAGAAATTAGAAACAA+TGG - Chr1:19546704-19546723 None:intergenic 30.0%
CATAACATCCTTGTTCTTAA+TGG + Chr1:19544663-19544682 MsG0180001329.01.T01:intron 30.0%
CATGACAAGGTTATAAAGAA+GGG + Chr1:19548359-19548378 MsG0180001329.01.T01:intron 30.0%
CCAAAGAGAAAAGGATTTAA+AGG + Chr1:19541259-19541278 MsG0180001329.01.T01:intron 30.0%
CGGATCTTGACAAAATATTT+GGG - Chr1:19544013-19544032 None:intergenic 30.0%
CTAATTCTATGACTATTGGT+TGG + Chr1:19548108-19548127 MsG0180001329.01.T01:CDS 30.0%
CTGATAGTATCTGTGTAATA+TGG - Chr1:19543741-19543760 None:intergenic 30.0%
CTTCTTTATACCTGGTAATT+GGG - Chr1:19541216-19541235 None:intergenic 30.0%
GAAAATTATATTCCCAGGAA+AGG + Chr1:19546010-19546029 MsG0180001329.01.T01:intron 30.0%
GAAGCTCAAATGATAACAAA+TGG + Chr1:19547238-19547257 MsG0180001329.01.T01:CDS 30.0%
GAGATCATTTCTTTATAACC+TGG - Chr1:19549641-19549660 None:intergenic 30.0%
GATCTTGACAAAATATTTGG+GGG - Chr1:19544011-19544030 None:intergenic 30.0%
GATGAAACACAATACATTCA+AGG + Chr1:19550358-19550377 MsG0180001329.01.T01:CDS 30.0%
GCACACTTGAACAAATTTAA+AGG + Chr1:19540868-19540887 MsG0180001329.01.T01:intron 30.0%
GCCTACAAAAATTGACATTT+GGG - Chr1:19550265-19550284 None:intergenic 30.0%
GCTAAAAATGTCTCCTAATT+TGG + Chr1:19540764-19540783 MsG0180001329.01.T01:intron 30.0%
GCTTAGATTCAAATGAAACT+TGG - Chr1:19544473-19544492 None:intergenic 30.0%
GGATCTTGACAAAATATTTG+GGG - Chr1:19544012-19544031 None:intergenic 30.0%
GGCAATGTGACATAAAAATA+GGG - Chr1:19540704-19540723 None:intergenic 30.0%
GGTAAGTTTACCATCTAAAA+AGG + Chr1:19542607-19542626 MsG0180001329.01.T01:intron 30.0%
GGTATTTATATTAGATCTGG+GGG - Chr1:19543720-19543739 None:intergenic 30.0%
GTATCTTACAAAGGAATACT+AGG + Chr1:19545248-19545267 MsG0180001329.01.T01:intron 30.0%
GTATTCCTTTGTAAGATACA+TGG - Chr1:19545247-19545266 None:intergenic 30.0%
GTATTTATATTAGATCTGGG+GGG - Chr1:19543719-19543738 None:intergenic 30.0%
GTCATGGATCAAAGAAATTA+AGG - Chr1:19548541-19548560 None:intergenic 30.0%
GTCATGGATGAAAGAAATTA+AGG - Chr1:19548732-19548751 None:intergenic 30.0%
GTGTTTGATGTTTCAATTGT+TGG + Chr1:19544313-19544332 MsG0180001329.01.T01:intron 30.0%
TACTATCACTAAATCCAACA+AGG + Chr1:19548217-19548236 MsG0180001329.01.T01:CDS 30.0%
TATAAAGAAGGGATCTCTTA+TGG + Chr1:19548757-19548776 MsG0180001329.01.T01:CDS 30.0%
TATATTAACATAGTCAGTGG+CGG - Chr1:19544033-19544052 None:intergenic 30.0%
TATATTTGCAGAATGTTCCA+AGG + Chr1:19544096-19544115 MsG0180001329.01.T01:intron 30.0%
TATGAATTTCTTTGTTGCAG+AGG + Chr1:19546882-19546901 MsG0180001329.01.T01:intron 30.0%
TATGATCTTGAAAAGTTGCA+TGG - Chr1:19547999-19548018 None:intergenic 30.0%
TATTATTGATCCCAATTACC+AGG + Chr1:19541203-19541222 MsG0180001329.01.T01:intron 30.0%
TATTCCCATGAAAAAAGGAT+GGG + Chr1:19545988-19546007 MsG0180001329.01.T01:intron 30.0%
TCACTTGATTCAATTCATCA+TGG - Chr1:19540828-19540847 None:intergenic 30.0%
TCTATGTCTGTTGTCATAAA+CGG - Chr1:19542040-19542059 None:intergenic 30.0%
TCTTCTTTATAACCTTGTCA+TGG - Chr1:19548557-19548576 None:intergenic 30.0%
TGAAGAAAAAAGAGATGGAA+GGG - Chr1:19543827-19543846 None:intergenic 30.0%
TGATGAGTATATTACTTTGC+AGG + Chr1:19542449-19542468 MsG0180001329.01.T01:intron 30.0%
TGATGTGTATTCAAAATACC+CGG + Chr1:19543629-19543648 MsG0180001329.01.T01:intron 30.0%
TGGATTCAAAAATTATTCCC+TGG - Chr1:19546262-19546281 None:intergenic 30.0%
TGGCAATGTGACATAAAAAT+AGG - Chr1:19540705-19540724 None:intergenic 30.0%
TGTACATGATGAATTGAAAC+AGG + Chr1:19542705-19542724 MsG0180001329.01.T01:intron 30.0%
TGTCATGGATCAAAGAAAAT+AGG - Chr1:19548346-19548365 None:intergenic 30.0%
TGTGGTTCATGAATTGAAAT+AGG + Chr1:19547968-19547987 MsG0180001329.01.T01:intron 30.0%
TTATTCCCATGAAAAAAGGA+TGG + Chr1:19545987-19546006 MsG0180001329.01.T01:intron 30.0%
TTCCTTATAACCTGGTAATT+GGG - Chr1:19543115-19543134 None:intergenic 30.0%
TTCTTAATGGTGTGATTCAT+TGG + Chr1:19544676-19544695 MsG0180001329.01.T01:intron 30.0%
TTTACCCATGTATCTTACAA+AGG + Chr1:19545239-19545258 MsG0180001329.01.T01:intron 30.0%
TTTATGTAATTTACCCTACC+GGG - Chr1:19550403-19550422 None:intergenic 30.0%
TTTCATTGGTCCTTACTATT+GGG - Chr1:19546547-19546566 None:intergenic 30.0%
TTTGCAAAGTCTCTCAAATA+TGG + Chr1:19547043-19547062 MsG0180001329.01.T01:CDS 30.0%
! AAAATATCCCCGATTTTCAT+AGG + Chr1:19539673-19539692 MsG0180001329.01.T01:CDS 30.0%
! ACACAATACATTCAAGGTTT+TGG + Chr1:19550364-19550383 MsG0180001329.01.T01:CDS 30.0%
! ATCATTTCAAAGTTCTAGCT+AGG + Chr1:19543368-19543387 MsG0180001329.01.T01:intron 30.0%
! ATTCTAAAGAGGAAAGACAT+TGG + Chr1:19548953-19548972 MsG0180001329.01.T01:CDS 30.0%
! ATTTTCTTTGATCCATGACA+AGG + Chr1:19548346-19548365 MsG0180001329.01.T01:intron 30.0%
! CATCTTTGTACCAATTTTGT+CGG + Chr1:19545580-19545599 MsG0180001329.01.T01:intron 30.0%
! CATTTTGTGTGTAGAATCAA+AGG + Chr1:19550325-19550344 MsG0180001329.01.T01:intron 30.0%
! CCTTTAAATCCTTTTCTCTT+TGG - Chr1:19541262-19541281 None:intergenic 30.0%
! CTTTCAAGAAGATGATTTGT+TGG - Chr1:19541301-19541320 None:intergenic 30.0%
! GATTTGAAGCTTAATGCAAA+TGG - Chr1:19547552-19547571 None:intergenic 30.0%
! GTGATCATGATATTCTAAAG+AGG + Chr1:19548779-19548798 MsG0180001329.01.T01:CDS 30.0%
! TATTGGTGGATCATATTTCA+AGG + Chr1:19547087-19547106 MsG0180001329.01.T01:CDS 30.0%
! TCATTTCAAAGTTCTAGCTA+GGG + Chr1:19543369-19543388 MsG0180001329.01.T01:intron 30.0%
! TCCCAAATGTCAATTTTTGT+AGG + Chr1:19550261-19550280 MsG0180001329.01.T01:intron 30.0%
! TTTTCATTGGTCCTTACTAT+TGG - Chr1:19546548-19546567 None:intergenic 30.0%
!! AAATTAACTCTAAAGCAGGT+AGG + Chr1:19547752-19547771 MsG0180001329.01.T01:intron 30.0%
!! ACATTAACTTGTTAGAACGT+GGG - Chr1:19546090-19546109 None:intergenic 30.0%
!! AGTATTAAAACATTTTGGCG+TGG + Chr1:19546593-19546612 MsG0180001329.01.T01:intron 30.0%
!! ATTGATTCGTGAAATTTCGT+AGG - Chr1:19545427-19545446 None:intergenic 30.0%
!! ATTTTCCCATCCTTTTTTCA+TGG - Chr1:19545996-19546015 None:intergenic 30.0%
!! CAACTGATTTTTCCAAAAAC+AGG + Chr1:19545629-19545648 MsG0180001329.01.T01:intron 30.0%
!! TACATTAACTTGTTAGAACG+TGG - Chr1:19546091-19546110 None:intergenic 30.0%
!! TATGTGGAGAAATTTTGGAA+AGG + Chr1:19546917-19546936 MsG0180001329.01.T01:CDS 30.0%
!! TTCATCAATGGGTTTTATGT+TGG - Chr1:19540069-19540088 None:intergenic 30.0%
!! TTGCAAATGAACTCTAAAGT+AGG + Chr1:19540563-19540582 MsG0180001329.01.T01:intron 30.0%
!! TTGGAGTTCTAAACTAGATA+AGG - Chr1:19542144-19542163 None:intergenic 30.0%
!! TTTTCCCATCCTTTTTTCAT+GGG - Chr1:19545995-19546014 None:intergenic 30.0%
!!! AATTTTTTTGATCCATGTCC+AGG + Chr1:19549620-19549639 MsG0180001329.01.T01:intron 30.0%
!!! ATTTTATCCCCTTTGAAACA+CGG - Chr1:19544936-19544955 None:intergenic 30.0%
!!! ATTTTTTGATCCCAATTACC+AGG + Chr1:19543102-19543121 MsG0180001329.01.T01:intron 30.0%
!!! GATATGCGGTTTTAAAAAAC+GGG + Chr1:19541873-19541892 MsG0180001329.01.T01:intron 30.0%
!!! TAAGTTTTTTGAGGGACAAA+AGG + Chr1:19547649-19547668 MsG0180001329.01.T01:intron 30.0%
!!! TCATAAACGGCAATTTTTTG+CGG - Chr1:19542027-19542046 None:intergenic 30.0%
!!! TTTTGAAATTCTTGTTGCAG+AGG + Chr1:19539799-19539818 MsG0180001329.01.T01:intron 30.0%
!!! TTTTGGGACCCAATAAAAAT+AGG + Chr1:19550095-19550114 MsG0180001329.01.T01:intron 30.0%
AAAGAATGCAAAGTGGAGAT+TGG + Chr1:19544250-19544269 MsG0180001329.01.T01:CDS 35.0%
AAAGTTCTCCACATACTTCT+TGG - Chr1:19539829-19539848 None:intergenic 35.0%
AAGAACTCACCTGAGAAATT+TGG - Chr1:19540242-19540261 None:intergenic 35.0%
AAGACATTGGAGAAACTTGT+AGG + Chr1:19548966-19548985 MsG0180001329.01.T01:CDS 35.0%
AAGTTCTCCACATACTTCTT+GGG - Chr1:19539828-19539847 None:intergenic 35.0%
ACTATATCCACTTTCATAGC+AGG - Chr1:19548068-19548087 None:intergenic 35.0%
ACTCTTAAGCAAAAATTCCC+AGG + Chr1:19547289-19547308 MsG0180001329.01.T01:CDS 35.0%
ACTTACCAAGATATGACCAT+GGG - Chr1:19547889-19547908 None:intergenic 35.0%
AGATTGACAAACCAACCAAA+TGG - Chr1:19550216-19550235 None:intergenic 35.0%
AGCTTCAACAACTTCATCAA+TGG - Chr1:19540081-19540100 None:intergenic 35.0%
AGGATGTCGTGAAAAATTTG+TGG + Chr1:19550529-19550548 MsG0180001329.01.T01:CDS 35.0%
AGTATCTTACTTTGCAGATG+GGG + Chr1:19540601-19540620 MsG0180001329.01.T01:intron 35.0%
AGTCACAAGAGATCTTCTAT+TGG - Chr1:19542838-19542857 None:intergenic 35.0%
AGTGAGATATCAAGAGGTTA+GGG - Chr1:19545134-19545153 None:intergenic 35.0%
ATAAAAAGGCCGCAACAAAA+AGG + Chr1:19541905-19541924 MsG0180001329.01.T01:intron 35.0%
ATAGTAACGGTGAATGAAAG+TGG - Chr1:19542939-19542958 None:intergenic 35.0%
ATCAAGATTTCGAATCCACA+TGG + Chr1:19544960-19544979 MsG0180001329.01.T01:intron 35.0%
ATCCCAATTACCAGGTTATA+AGG + Chr1:19543110-19543129 MsG0180001329.01.T01:intron 35.0%
ATGACAACAGACATAGAATC+TGG + Chr1:19542043-19542062 MsG0180001329.01.T01:intron 35.0%
ATGTGAGTTAAGCATATTCC+TGG - Chr1:19545960-19545979 None:intergenic 35.0%
ATTGAATGGGAAAATGTTGG+GGG - Chr1:19546497-19546516 None:intergenic 35.0%
ATTTGTGGAGTTGAAAATGG+GGG + Chr1:19550544-19550563 MsG0180001329.01.T01:CDS 35.0%
CAAATATCATGATCAGCCTT+TGG + Chr1:19544492-19544511 MsG0180001329.01.T01:intron 35.0%
CAATAGAACAAACAGCTAAG+GGG - Chr1:19544345-19544364 None:intergenic 35.0%
CAATTACCAGGTTATAAGGA+AGG + Chr1:19543114-19543133 MsG0180001329.01.T01:intron 35.0%
CCAAAGAGATTTATGGAAAG+AGG + Chr1:19550509-19550528 MsG0180001329.01.T01:CDS 35.0%
CCAATTACCAGGTATAAAGA+AGG + Chr1:19541214-19541233 MsG0180001329.01.T01:intron 35.0%
CCATGACAAGGTTATAAAGA+AGG + Chr1:19548358-19548377 MsG0180001329.01.T01:intron 35.0%
CCTAGGAATAATTAATACCC+AGG + Chr1:19545939-19545958 MsG0180001329.01.T01:intron 35.0%
CCTCTTTCCATAAATCTCTT+TGG - Chr1:19550512-19550531 None:intergenic 35.0%
CCTGGGTATTAATTATTCCT+AGG - Chr1:19545942-19545961 None:intergenic 35.0%
CCTTCTTTATAACCTTGTCA+TGG - Chr1:19548361-19548380 None:intergenic 35.0%
CCTTCTTTATACCTGGTAAT+TGG - Chr1:19541217-19541236 None:intergenic 35.0%
CCTTGATGGAGTAATAGTAA+CGG - Chr1:19541070-19541089 None:intergenic 35.0%
CGGAATGAGCAAAAATAGAT+GGG + Chr1:19544856-19544875 MsG0180001329.01.T01:intron 35.0%
CGTTACTATTACTCCATCAA+GGG + Chr1:19541068-19541087 MsG0180001329.01.T01:intron 35.0%
CTATATCCACTTTCATAGCA+GGG - Chr1:19548067-19548086 None:intergenic 35.0%
CTCTCATTAACAACTTCAAC+TGG - Chr1:19542518-19542537 None:intergenic 35.0%
CTTCCTTATAACCTGGTAAT+TGG - Chr1:19543116-19543135 None:intergenic 35.0%
GAAAAACCTTGCAACTTCTT+AGG - Chr1:19548251-19548270 None:intergenic 35.0%
GAACACCATTTGGGAATTTA+AGG - Chr1:19539878-19539897 None:intergenic 35.0%
GAACACCATTTGGTAAGTTA+AGG - Chr1:19546961-19546980 None:intergenic 35.0%
GAAGAAAAAAGAGATGGAAG+GGG - Chr1:19543826-19543845 None:intergenic 35.0%
GAATCACACCATTAAGAACA+AGG - Chr1:19544674-19544693 None:intergenic 35.0%
GAGTATATTACTTTGCAGGT+AGG + Chr1:19542453-19542472 MsG0180001329.01.T01:intron 35.0%
GAGTATCTTACTTTGCAGAT+GGG + Chr1:19540600-19540619 MsG0180001329.01.T01:intron 35.0%
GATGGGAAAATTATATTCCC+AGG + Chr1:19546005-19546024 MsG0180001329.01.T01:intron 35.0%
GATTTCCTATCTTCATTCCT+TGG - Chr1:19546175-19546194 None:intergenic 35.0%
GCGGATCTTGACAAAATATT+TGG - Chr1:19544014-19544033 None:intergenic 35.0%
GCTACAGAAAAAGCTAAAGA+AGG + Chr1:19540098-19540117 MsG0180001329.01.T01:CDS 35.0%
GCTCAAAGGACAAGAAAATA+TGG + Chr1:19540179-19540198 MsG0180001329.01.T01:CDS 35.0%
GCTTCAACAACTTCATCAAT+GGG - Chr1:19540080-19540099 None:intergenic 35.0%
GGACCAATGAAAATAAACAC+CGG + Chr1:19546555-19546574 MsG0180001329.01.T01:intron 35.0%
GGATGTTATGATCGTGAAAT+TGG - Chr1:19544653-19544672 None:intergenic 35.0%
GGGATTGCAAATTTAAGAGT+TGG + Chr1:19542771-19542790 MsG0180001329.01.T01:intron 35.0%
GGTGATAATCCAAAGAGAAA+AGG + Chr1:19541250-19541269 MsG0180001329.01.T01:intron 35.0%
GTAATGGTCTATCCATGTAA+CGG + Chr1:19546129-19546148 MsG0180001329.01.T01:intron 35.0%
GTGTGCTCTTGAAAATTACA+TGG - Chr1:19542736-19542755 None:intergenic 35.0%
GTTATCATTTGAGCTTCCAT+TGG - Chr1:19547235-19547254 None:intergenic 35.0%
GTTCATTAATCAAGTCCATG+TGG - Chr1:19544978-19544997 None:intergenic 35.0%
TAACTGAGTGAGATATCAAG+AGG - Chr1:19545140-19545159 None:intergenic 35.0%
TACTTACCAAGATATGACCA+TGG - Chr1:19547890-19547909 None:intergenic 35.0%
TATAAAGAAGGGATCTCTTC+TGG + Chr1:19548370-19548389 MsG0180001329.01.T01:CDS 35.0%
TCCAAGGAGTTTATGAAAAG+AGG + Chr1:19544112-19544131 MsG0180001329.01.T01:intron 35.0%
TGAAGACATGACTATGAAAG+TGG + Chr1:19540912-19540931 MsG0180001329.01.T01:intron 35.0%
TGAATTATCACCACAAGAAG+AGG - Chr1:19543142-19543161 None:intergenic 35.0%
TGAGTATCTTACTTTGCAGA+TGG + Chr1:19540599-19540618 MsG0180001329.01.T01:intron 35.0%
TGATGAGAGTGAAATACCAA+TGG + Chr1:19547216-19547235 MsG0180001329.01.T01:CDS 35.0%
TGCGTAAGTTAACTCAAGTT+CGG - Chr1:19544792-19544811 None:intergenic 35.0%
TGTGAGTTAAGCATATTCCT+GGG - Chr1:19545959-19545978 None:intergenic 35.0%
TGTGCTCTTGAAAAATCACT+TGG - Chr1:19540853-19540872 None:intergenic 35.0%
TGTTCCTTTCTACCAAACAT+AGG - Chr1:19545909-19545928 None:intergenic 35.0%
TTAAACAAACCAAACTCGAG+AGG - Chr1:19544617-19544636 None:intergenic 35.0%
TTAAATAACGGTCACAGTCA+AGG - Chr1:19542311-19542330 None:intergenic 35.0%
TTATGATCGTGAAATTGGAG+CGG - Chr1:19544648-19544667 None:intergenic 35.0%
TTGTCAAAATCTTACGTCCA+TGG + Chr1:19542572-19542591 MsG0180001329.01.T01:intron 35.0%
! ATTCTAAAGAGGAAAGACGA+TGG + Chr1:19548790-19548809 MsG0180001329.01.T01:CDS 35.0%
! ATTTTCTTGTCCTTTGAGCT+TGG - Chr1:19540178-19540197 None:intergenic 35.0%
! CATTGGTGGATCATATTTCA+AGG + Chr1:19540004-19540023 MsG0180001329.01.T01:CDS 35.0%
! CTACCTATACCTTTTTGTTG+CGG - Chr1:19541917-19541936 None:intergenic 35.0%
! GTGATCGTGATATTCTAAAG+AGG + Chr1:19548392-19548411 MsG0180001329.01.T01:CDS 35.0%
! GTGATCGTGATATTCTAAAG+TGG + Chr1:19548392-19548411 MsG0180001329.01.T01:CDS 35.0%
! TACTATTGACTATTGATGGC+CGG - Chr1:19546577-19546596 None:intergenic 35.0%
! TCCTCTTTTCATAAACTCCT+TGG - Chr1:19544116-19544135 None:intergenic 35.0%
! TGGGTTTGTAAAAGCACAAT+TGG + Chr1:19544715-19544734 MsG0180001329.01.T01:intron 35.0%
! TGTAAAAGCACAATTGGTGT+TGG + Chr1:19544721-19544740 MsG0180001329.01.T01:intron 35.0%
! TTACCGTTTTCACCGTTTTA+CGG + Chr1:19541943-19541962 MsG0180001329.01.T01:intron 35.0%
! TTTTCTTGTCCTTTGAGCTT+GGG - Chr1:19540177-19540196 None:intergenic 35.0%
! TTTTGTTGCGGCCTTTTTAT+CGG - Chr1:19541905-19541924 None:intergenic 35.0%
!! AAACTCTCTGGAGTTGAAAA+TGG + Chr1:19544144-19544163 MsG0180001329.01.T01:intron 35.0%
!! AACTCTCTGGAGTTGAAAAT+GGG + Chr1:19544145-19544164 MsG0180001329.01.T01:intron 35.0%
!! AGAAGTATGTGGAGAACTTT+TGG + Chr1:19539829-19539848 MsG0180001329.01.T01:CDS 35.0%
!! CATTAACTTGTTAGAACGTG+GGG - Chr1:19546089-19546108 None:intergenic 35.0%
!! CTCAAGTTCGGCTATTTTAA+CGG - Chr1:19544780-19544799 None:intergenic 35.0%
!! GAGAAAAATAGTGGTGGATT+TGG + Chr1:19540205-19540224 MsG0180001329.01.T01:CDS 35.0%
!! TGAAGCTGTTTTGCGTTATT+TGG + Chr1:19543788-19543807 MsG0180001329.01.T01:intron 35.0%
!! TGCAAATTTAAGAGTTGGTG+AGG + Chr1:19542776-19542795 MsG0180001329.01.T01:intron 35.0%
!! TTGACATTTGGCTCAACTTT+TGG - Chr1:19545365-19545384 None:intergenic 35.0%
!! TTTGGTTGGTTTGTCAATCT+TGG + Chr1:19550216-19550235 MsG0180001329.01.T01:intron 35.0%
!!! AGAAGATCTGTTTTGACTAC+TGG + Chr1:19540958-19540977 MsG0180001329.01.T01:intron 35.0%
!!! ATGAGTTTTGTTCAGTACGT+GGG - Chr1:19546041-19546060 None:intergenic 35.0%
!!! CACTTTTTCGACAAATTCCT+AGG + Chr1:19546198-19546217 MsG0180001329.01.T01:intron 35.0%
!!! CCATCTATTTTTGCTCATTC+CGG - Chr1:19544858-19544877 None:intergenic 35.0%
!!! TCAAGTTCGGCTATTTTAAC+GGG - Chr1:19544779-19544798 None:intergenic 35.0%
AAACTCTCACTCACCATTAG+TGG + Chr1:19545679-19545698 MsG0180001329.01.T01:intron 40.0%
AAAGAAGGAGTTGAAGTGAG+TGG + Chr1:19540113-19540132 MsG0180001329.01.T01:CDS 40.0%
AAATTCCCCACTTTCTACAC+GGG - Chr1:19546296-19546315 None:intergenic 40.0%
AACAAAAAGGGTGGTAGCAA+AGG + Chr1:19541756-19541775 MsG0180001329.01.T01:intron 40.0%
AAGACACTCGAGAAACTTGT+AGG + Chr1:19548612-19548631 MsG0180001329.01.T01:CDS 40.0%
AAGACGATGGAGAAACTTGT+AGG + Chr1:19548803-19548822 MsG0180001329.01.T01:CDS 40.0%
AATGAAAAGGGTGGTAGCAA+AGG + Chr1:19540424-19540443 MsG0180001329.01.T01:intron 40.0%
ACATTACCACCTTCTGAATC+TGG - Chr1:19543585-19543604 None:intergenic 40.0%
ACTCCGTAAAACGGTGAAAA+CGG - Chr1:19541949-19541968 None:intergenic 40.0%
AGAAGATCTCTTGTGACTAC+TGG + Chr1:19542840-19542859 MsG0180001329.01.T01:intron 40.0%
AGGAAGTCATGAAAACTCTC+TGG + Chr1:19544132-19544151 MsG0180001329.01.T01:intron 40.0%
AGGTAGGAACATTGAAGACA+CGG + Chr1:19547768-19547787 MsG0180001329.01.T01:intron 40.0%
AGTTTCACTTCACACTTCAC+AGG + Chr1:19546670-19546689 MsG0180001329.01.T01:intron 40.0%
ATAGAAACAAAAGGAGGGGA+AGG + Chr1:19541810-19541829 MsG0180001329.01.T01:intron 40.0%
ATGGTTACTATGTTCAGTGG+CGG + Chr1:19543672-19543691 MsG0180001329.01.T01:intron 40.0%
CAAGAGGTTAGGGAATAATG+TGG - Chr1:19545124-19545143 None:intergenic 40.0%
CAAGATGATATGTGGTGTGT+TGG - Chr1:19543938-19543957 None:intergenic 40.0%
CAAGTAAGTGAACCGTTACA+TGG - Chr1:19546144-19546163 None:intergenic 40.0%
CATGGTTATAGGTTCTCTGA+AGG + Chr1:19544211-19544230 MsG0180001329.01.T01:intron 40.0%
CCAAAAATGCATGCTCTTCA+GGG + Chr1:19548445-19548464 MsG0180001329.01.T01:CDS 40.0%
CCGGAATGAGCAAAAATAGA+TGG + Chr1:19544855-19544874 MsG0180001329.01.T01:intron 40.0%
CCGTTACTATTACTCCATCA+AGG + Chr1:19541067-19541086 MsG0180001329.01.T01:intron 40.0%
CTCAGTTAGTTAAATCGCAC+AGG + Chr1:19544820-19544839 MsG0180001329.01.T01:intron 40.0%
CTCTCTTTAACAACTTCCAC+TGG - Chr1:19540665-19540684 None:intergenic 40.0%
GAAATTCCCCACTTTCTACA+CGG - Chr1:19546297-19546316 None:intergenic 40.0%
GAACTTGAGTTAACTTACGC+AGG + Chr1:19544791-19544810 MsG0180001329.01.T01:intron 40.0%
GAAGTGGGAACCAATTGTAA+TGG - Chr1:19546525-19546544 None:intergenic 40.0%
GAGGATTCCCAAGAAATATG+TGG + Chr1:19546901-19546920 MsG0180001329.01.T01:intron 40.0%
GAGTGAGATATCAAGAGGTT+AGG - Chr1:19545135-19545154 None:intergenic 40.0%
GCATGCACCAAAGAGATTTA+TGG + Chr1:19550502-19550521 MsG0180001329.01.T01:intron 40.0%
GGGATTGCAAACTTAAGAGT+TGG + Chr1:19540889-19540908 MsG0180001329.01.T01:intron 40.0%
GTGAAGTGTGAAGTGAAACT+CGG - Chr1:19546670-19546689 None:intergenic 40.0%
TAGAAACAAAAGGAGGGGAA+GGG + Chr1:19541811-19541830 MsG0180001329.01.T01:intron 40.0%
TAGGGAGAAACCGACAAAAT+TGG - Chr1:19545593-19545612 None:intergenic 40.0%
TCCAAAAATGCATGCTCTTC+AGG + Chr1:19548444-19548463 MsG0180001329.01.T01:CDS 40.0%
TGATAAGTTCCTCTCGAGTT+TGG + Chr1:19544605-19544624 MsG0180001329.01.T01:intron 40.0%
TGGATTATCACCACAAGAAG+AGG - Chr1:19541242-19541261 None:intergenic 40.0%
TGGCAAGAGAAAAATAGTGG+TGG + Chr1:19540199-19540218 MsG0180001329.01.T01:CDS 40.0%
TGTAACGTGTTTCATCATCG+CGG - Chr1:19542003-19542022 None:intergenic 40.0%
TGTGTTTCTCCAGATTCAGA+AGG + Chr1:19543573-19543592 MsG0180001329.01.T01:intron 40.0%
TTACCAACATATTGCTGCCA+TGG - Chr1:19542592-19542611 None:intergenic 40.0%
TTCCTGGGAATGATATTCCA+GGG + Chr1:19546242-19546261 MsG0180001329.01.T01:intron 40.0%
TTTCCTGGGAATGATATTCC+AGG + Chr1:19546241-19546260 MsG0180001329.01.T01:intron 40.0%
TTTGGTGAATTCCAAACACC+CGG + Chr1:19550382-19550401 MsG0180001329.01.T01:CDS 40.0%
! ATTCTAAAGAGGACAGACAC+TGG + Chr1:19548403-19548422 MsG0180001329.01.T01:CDS 40.0%
! CGGAGAGTAATGGAGATATT+TGG + Chr1:19539916-19539935 MsG0180001329.01.T01:CDS 40.0%
! CTCTGTAGATCATGCAGTTT+TGG - Chr1:19549722-19549741 None:intergenic 40.0%
! CTTTTACAAACCCAACAGTG+TGG - Chr1:19544709-19544728 None:intergenic 40.0%
! GGATACCACCTTTTGATCAA+CGG - Chr1:19543903-19543922 None:intergenic 40.0%
! GTTATAGGTTCTCTGAAGGT+TGG + Chr1:19544215-19544234 MsG0180001329.01.T01:intron 40.0%
!! AAGAGCATGCACTTTTGGAA+GGG - Chr1:19548639-19548658 None:intergenic 40.0%
!! AAGAGCTTGCACTTTTGGAA+GGG - Chr1:19548830-19548849 None:intergenic 40.0%
!! ACTCTCTGGAGTTGAAAATG+GGG + Chr1:19544146-19544165 MsG0180001329.01.T01:intron 40.0%
!! ATATTTTGGGCGGAGAGTAA+TGG + Chr1:19539906-19539925 MsG0180001329.01.T01:CDS 40.0%
!! GAAGAGCATGCATTTTTGGA+AGG - Chr1:19548444-19548463 None:intergenic 40.0%
!! TGGCCGGTGTTTATTTTCAT+TGG - Chr1:19546561-19546580 None:intergenic 40.0%
!!! CATGAGTTTTGTTCAGTACG+TGG - Chr1:19546042-19546061 None:intergenic 40.0%
!!! GATCTGTTTTGACTACTGGT+TGG + Chr1:19540962-19540981 MsG0180001329.01.T01:intron 40.0%
!!! GCACAGGTGTTTTTTTTAGC+CGG + Chr1:19544836-19544855 MsG0180001329.01.T01:intron 40.0%
!!! GTAGATCATGCAGTTTTGGA+CGG - Chr1:19549718-19549737 None:intergenic 40.0%
AAAAGGGTGGTAGCAAAGGT+GGG + Chr1:19540428-19540447 MsG0180001329.01.T01:intron 45.0%
AAACACCCGTGTAGAAAGTG+GGG + Chr1:19546288-19546307 MsG0180001329.01.T01:intron 45.0%
AAAGAAGGGACCTCTTCTTG+TGG + Chr1:19541229-19541248 MsG0180001329.01.T01:intron 45.0%
AAATACCCACCCAAGCTCAA+AGG + Chr1:19540165-19540184 MsG0180001329.01.T01:CDS 45.0%
AATTTACCCTACCGGGTGTT+TGG - Chr1:19550396-19550415 None:intergenic 45.0%
ACAAACACCCGTGTAGAAAG+TGG + Chr1:19546286-19546305 MsG0180001329.01.T01:intron 45.0%
ACACCTGTAACGGTCGAAAT+CGG + Chr1:19542263-19542282 MsG0180001329.01.T01:intron 45.0%
ACATTCCTGGGAATAGAGCT+TGG + Chr1:19545871-19545890 MsG0180001329.01.T01:intron 45.0%
ACTACCCAGCCAAATTTCTC+AGG + Chr1:19540230-19540249 MsG0180001329.01.T01:CDS 45.0%
ACTCACCTGAGAAATTTGGC+TGG - Chr1:19540238-19540257 None:intergenic 45.0%
AGAGGTCCCTTCTTTATACC+TGG - Chr1:19541224-19541243 None:intergenic 45.0%
ATGACACAAACTTACGCCCA+TGG + Chr1:19547870-19547889 MsG0180001329.01.T01:CDS 45.0%
CAAACACCCGTGTAGAAAGT+GGG + Chr1:19546287-19546306 MsG0180001329.01.T01:intron 45.0%
CAAACCCAACAGTGTGGTTA+AGG - Chr1:19544703-19544722 None:intergenic 45.0%
CAGACACTGGAGAAACTTGT+AGG + Chr1:19548416-19548435 MsG0180001329.01.T01:CDS 45.0%
CATTCCTGGGAATAGAGCTT+GGG + Chr1:19545872-19545891 MsG0180001329.01.T01:intron 45.0%
CCAAACCCTAAGAAGTTGCA+AGG + Chr1:19548242-19548261 MsG0180001329.01.T01:CDS 45.0%
CCAACTGAGTTAAACTCACG+AGG - Chr1:19545507-19545526 None:intergenic 45.0%
CCTCGTGAGTTTAACTCAGT+TGG + Chr1:19545504-19545523 MsG0180001329.01.T01:intron 45.0%
CCTTATCGCAACACCTGTAA+CGG + Chr1:19542253-19542272 MsG0180001329.01.T01:intron 45.0%
CCTTGCAACTTCTTAGGGTT+TGG - Chr1:19548245-19548264 None:intergenic 45.0%
CTCACCTGAGAAATTTGGCT+GGG - Chr1:19540237-19540256 None:intergenic 45.0%
GACTCGAACCGTTGATCAAA+AGG + Chr1:19543892-19543911 MsG0180001329.01.T01:intron 45.0%
GATCTCTTGTGACTACTGGT+TGG + Chr1:19542844-19542863 MsG0180001329.01.T01:intron 45.0%
GATGCTAGTTGCGAGACAAT+GGG - Chr1:19545209-19545228 None:intergenic 45.0%
GGGATCACATGGTAAAATGG+AGG - Chr1:19546069-19546088 None:intergenic 45.0%
GGGATTGCAAGCTTAAGAGT+TGG + Chr1:19548035-19548054 MsG0180001329.01.T01:CDS 45.0%
GGTCCTTACTATTGGGAAGT+GGG - Chr1:19546540-19546559 None:intergenic 45.0%
GTGGGGATCACATGGTAAAA+TGG - Chr1:19546072-19546091 None:intergenic 45.0%
GTTCCCACTTCCCAATAGTA+AGG + Chr1:19546534-19546553 MsG0180001329.01.T01:intron 45.0%
GTTTCTCCAGATTCAGAAGG+TGG + Chr1:19543576-19543595 MsG0180001329.01.T01:intron 45.0%
TCACAAAAAAATGGCCAGGC+AGG + Chr1:19543870-19543889 MsG0180001329.01.T01:intron 45.0%
TCACTCACCATTAGTGGCAT+GGG + Chr1:19545685-19545704 MsG0180001329.01.T01:intron 45.0%
TCCCTACACCGTGTTTCAAA+GGG + Chr1:19544925-19544944 MsG0180001329.01.T01:intron 45.0%
TCGAACCGTTGATCAAAAGG+TGG + Chr1:19543895-19543914 MsG0180001329.01.T01:intron 45.0%
TGAATTCCAAACACCCGGTA+GGG + Chr1:19550387-19550406 MsG0180001329.01.T01:intron 45.0%
TGATGCTAGTTGCGAGACAA+TGG - Chr1:19545210-19545229 None:intergenic 45.0%
TGCAAGCTTAAGAGTTGGAG+AGG + Chr1:19548040-19548059 MsG0180001329.01.T01:CDS 45.0%
TGGGAGAAGAGCAATTCTCT+TGG + Chr1:19544875-19544894 MsG0180001329.01.T01:intron 45.0%
TGGTCCTTAACCACACTGTT+GGG + Chr1:19544696-19544715 MsG0180001329.01.T01:intron 45.0%
TGGTCCTTACTATTGGGAAG+TGG - Chr1:19546541-19546560 None:intergenic 45.0%
TTACGCCCATGGTCATATCT+TGG + Chr1:19547881-19547900 MsG0180001329.01.T01:CDS 45.0%
TTCCCTGGAATATCATTCCC+AGG - Chr1:19546247-19546266 None:intergenic 45.0%
TTGAAAATGGGGGACAGTCA+TGG + Chr1:19550554-19550573 MsG0180001329.01.T01:CDS 45.0%
TTGGTCCTTAACCACACTGT+TGG + Chr1:19544695-19544714 MsG0180001329.01.T01:intron 45.0%
! ACGGGCTGTTACCGATAAAA+AGG + Chr1:19541891-19541910 MsG0180001329.01.T01:intron 45.0%
! AGGCCGCAACAAAAAGGTAT+AGG + Chr1:19541911-19541930 MsG0180001329.01.T01:intron 45.0%
! AGGTGTTGCGATAAGGATTG+CGG - Chr1:19542249-19542268 None:intergenic 45.0%
! AGTTCTAGCTAGGGTAGTGT+AGG + Chr1:19543378-19543397 MsG0180001329.01.T01:intron 45.0%
! ATGTTGGGGGTGTGTATGTT+CGG - Chr1:19546484-19546503 None:intergenic 45.0%
! CAGTGGAGGCATGATTAAGA+AGG + Chr1:19542478-19542497 MsG0180001329.01.T01:intron 45.0%
! CCAAAAGTGCAAGCTCTTCA+TGG + Chr1:19548832-19548851 MsG0180001329.01.T01:CDS 45.0%
! CCAAAAGTGCATGCTCTTCA+GGG + Chr1:19548641-19548660 MsG0180001329.01.T01:CDS 45.0%
! CCATGAAGAGCTTGCACTTT+TGG - Chr1:19548835-19548854 None:intergenic 45.0%
! CTACACGGGTGTTTGTTTCT+TGG - Chr1:19546282-19546301 None:intergenic 45.0%
! GAAGAGCTTGCACTTTTGGA+AGG - Chr1:19548831-19548850 None:intergenic 45.0%
! GAGGATTCCCAAGAAGTATG+TGG + Chr1:19539818-19539837 MsG0180001329.01.T01:intron 45.0%
! GTTCTAGCTAGGGTAGTGTA+GGG + Chr1:19543379-19543398 MsG0180001329.01.T01:intron 45.0%
! TCCAAAAGTGCATGCTCTTC+AGG + Chr1:19548640-19548659 MsG0180001329.01.T01:CDS 45.0%
! TTTTCCCAAGCTCTATTCCC+AGG - Chr1:19545879-19545898 None:intergenic 45.0%
!! AGTTGGTGAGGACAAGACTA+TGG + Chr1:19542788-19542807 MsG0180001329.01.T01:intron 45.0%
!! CCCTGAAGAGCATGCATTTT+TGG - Chr1:19548448-19548467 None:intergenic 45.0%
!! CTCTCTGGAGTTGAAAATGG+GGG + Chr1:19544147-19544166 MsG0180001329.01.T01:intron 45.0%
!! CTTGGTGTTGTGCGACATTT+AGG + Chr1:19544893-19544912 MsG0180001329.01.T01:intron 45.0%
!! GAAGAGCATGCACTTTTGGA+AGG - Chr1:19548640-19548659 None:intergenic 45.0%
!! GGAAGCATGCTCTTTTGGAA+GGG - Chr1:19548993-19549012 None:intergenic 45.0%
!! GTGTGTTGGTTCATAGTGCT+TGG - Chr1:19543924-19543943 None:intergenic 45.0%
!! TCTCTGGAGTTGAAAATGGG+GGG + Chr1:19544148-19544167 MsG0180001329.01.T01:intron 45.0%
!! GTTTATTTAAAAAAAAAAAA+AGG - Chr1:19541527-19541546 None:intergenic 5.0%
!! TATATAAATTTATTAAGAAA+AGG - Chr1:19543517-19543536 None:intergenic 5.0%
!! TTAAATAAATAAAGAAATTA+AGG - Chr1:19548699-19548718 None:intergenic 5.0%
!!! AACTTTTATTTTTTTTAATT+TGG + Chr1:19541340-19541359 MsG0180001329.01.T01:intron 5.0%
!!! CTATTTAAAATTAATATTTA+AGG - Chr1:19549234-19549253 None:intergenic 5.0%
!!! CTTTTAATTTTTAAATATAT+TGG + Chr1:19547070-19547089 MsG0180001329.01.T01:CDS 5.0%
!!! TATCATTTTATATTTATTTT+GGG - Chr1:19541793-19541812 None:intergenic 5.0%
!!! TTTTTTTAAATAAACAAAAA+GGG + Chr1:19541744-19541763 MsG0180001329.01.T01:intron 5.0%
!!! TTTTTTTTAAATAAACAAAA+AGG + Chr1:19541743-19541762 MsG0180001329.01.T01:intron 5.0%
AAAGGGTGGTAGCAAAGGTG+GGG + Chr1:19540429-19540448 MsG0180001329.01.T01:intron 50.0%
AAGGAAGGGACCTCTTCTTG+TGG + Chr1:19543129-19543148 MsG0180001329.01.T01:intron 50.0%
ACATACCATCCTGCAGCCAT+GGG - Chr1:19540738-19540757 None:intergenic 50.0%
ACGTGGGTTTCTCCTTTCCT+GGG - Chr1:19546025-19546044 None:intergenic 50.0%
AGAGGACCCTGCTATGAAAG+TGG + Chr1:19548058-19548077 MsG0180001329.01.T01:CDS 50.0%
AGCGGTGAACCCACATACTT+AGG + Chr1:19545821-19545840 MsG0180001329.01.T01:intron 50.0%
CAAACGCCCCCTAAGTATGT+GGG - Chr1:19545833-19545852 None:intergenic 50.0%
CACCTGTAACGGTCGAAATC+GGG + Chr1:19542264-19542283 MsG0180001329.01.T01:intron 50.0%
CACTCACCATTAGTGGCATG+GGG + Chr1:19545686-19545705 MsG0180001329.01.T01:intron 50.0%
CCCTACACCGTGTTTCAAAG+GGG + Chr1:19544926-19544945 MsG0180001329.01.T01:intron 50.0%
CGGTGAACCCACATACTTAG+GGG + Chr1:19545823-19545842 MsG0180001329.01.T01:intron 50.0%
CGTCCATGGCAGCAATATGT+TGG + Chr1:19542586-19542605 MsG0180001329.01.T01:intron 50.0%
CTCACTCACCATTAGTGGCA+TGG + Chr1:19545684-19545703 MsG0180001329.01.T01:intron 50.0%
CTCCCTACACCGTGTTTCAA+AGG + Chr1:19544924-19544943 MsG0180001329.01.T01:intron 50.0%
CTTGTCCTTTGAGCTTGGGT+GGG - Chr1:19540173-19540192 None:intergenic 50.0%
GAAAAGGGTGGTAGCAAAGG+TGG + Chr1:19540427-19540446 MsG0180001329.01.T01:intron 50.0%
GAGCTTGATTGCTCCCTTGA+TGG - Chr1:19541084-19541103 None:intergenic 50.0%
GAGGTCCCTTCCTTATAACC+TGG - Chr1:19543123-19543142 None:intergenic 50.0%
GATAAGGATTGCGGTTGTCG+CGG - Chr1:19542240-19542259 None:intergenic 50.0%
GCGGTGAACCCACATACTTA+GGG + Chr1:19545822-19545841 MsG0180001329.01.T01:intron 50.0%
GGTGAACCCACATACTTAGG+GGG + Chr1:19545824-19545843 MsG0180001329.01.T01:intron 50.0%
GTGAATTCCAAACACCCGGT+AGG + Chr1:19550386-19550405 MsG0180001329.01.T01:intron 50.0%
GTTAGAACGTGGGGATCACA+TGG - Chr1:19546080-19546099 None:intergenic 50.0%
TACGTGGGTTTCTCCTTTCC+TGG - Chr1:19546026-19546045 None:intergenic 50.0%
TACTTTGCAGATGGGGACAG+AGG + Chr1:19540608-19540627 MsG0180001329.01.T01:intron 50.0%
TACTTTGCAGGTAGGGACAG+TGG + Chr1:19542461-19542480 MsG0180001329.01.T01:intron 50.0%
TCAAGGTCACAGTCGCGTAT+AGG - Chr1:19542294-19542313 None:intergenic 50.0%
TCTTGTCCTTTGAGCTTGGG+TGG - Chr1:19540174-19540193 None:intergenic 50.0%
TGAAAATGGGGGGACGATCA+TGG + Chr1:19544158-19544177 MsG0180001329.01.T01:intron 50.0%
TTCAATTTCCGCTGCGACAC+AGG - Chr1:19543772-19543791 None:intergenic 50.0%
TTCCCGATTTCGACCGTTAC+AGG - Chr1:19542269-19542288 None:intergenic 50.0%
TTGCCACAATCTTACGCCCA+TGG + Chr1:19540719-19540738 MsG0180001329.01.T01:CDS 50.0%
! AGCTTTGGTTGCTCCCTTGA+TGG - Chr1:19542966-19542985 None:intergenic 50.0%
! CAGAGGAGGCATGGTTAAGA+AGG + Chr1:19540625-19540644 MsG0180001329.01.T01:CDS 50.0%
! CCAAAAGAGCATGCTTCCCA+TGG + Chr1:19548995-19549014 MsG0180001329.01.T01:CDS 50.0%
! CCGTTACAGGTGTTGCGATA+AGG - Chr1:19542256-19542275 None:intergenic 50.0%
! CTTAGGGTTTGGTCCCTTGT+TGG - Chr1:19548234-19548253 None:intergenic 50.0%
! TAGTTGCGAGACAATGGGCT+AGG - Chr1:19545204-19545223 None:intergenic 50.0%
!! CCATGGGAAGCATGCTCTTT+TGG - Chr1:19548998-19549017 None:intergenic 50.0%
!! CCCCTTTGAAACACGGTGTA+GGG - Chr1:19544929-19544948 None:intergenic 50.0%
!! CCCTGAAGAGCATGCACTTT+TGG - Chr1:19548644-19548663 None:intergenic 50.0%
!! GGCTAAAAAGTGCTCACCAG+TGG + Chr1:19540646-19540665 MsG0180001329.01.T01:CDS 50.0%
!! GGGAAGCATGCTCTTTTGGA+AGG - Chr1:19548994-19549013 None:intergenic 50.0%
!! GTTCAGTGGCGGATCTTCAT+GGG + Chr1:19543683-19543702 MsG0180001329.01.T01:intron 50.0%
!! TCCCCTTTGAAACACGGTGT+AGG - Chr1:19544930-19544949 None:intergenic 50.0%
!! TGTTCAGTGGCGGATCTTCA+TGG + Chr1:19543682-19543701 MsG0180001329.01.T01:intron 50.0%
!! TTAGGGGGCGTTTGGTAGAA+AGG + Chr1:19545839-19545858 MsG0180001329.01.T01:intron 50.0%
AAGTTGTGCCTGTGTCGCAG+CGG + Chr1:19543761-19543780 MsG0180001329.01.T01:intron 55.0%
AATCTTACGCCCATGGCTGC+AGG + Chr1:19540726-19540745 MsG0180001329.01.T01:CDS 55.0%
ACACGGTGTAGGGAGATGTG+AGG - Chr1:19544919-19544938 None:intergenic 55.0%
ATTAGATCTGGGGGGAGCCA+TGG - Chr1:19543711-19543730 None:intergenic 55.0%
CAGCCATGGGCGTAAGATTG+TGG - Chr1:19540725-19540744 None:intergenic 55.0%
CCAAACGCCCCCTAAGTATG+TGG - Chr1:19545834-19545853 None:intergenic 55.0%
CTCTTGCCCCATGCCACTAA+TGG - Chr1:19545695-19545714 None:intergenic 55.0%
GACATACCATCCTGCAGCCA+TGG - Chr1:19540739-19540758 None:intergenic 55.0%
TTTGCAGATGGGGACAGAGG+AGG + Chr1:19540611-19540630 MsG0180001329.01.T01:intron 55.0%
TTTGCAGGTAGGGACAGTGG+AGG + Chr1:19542464-19542483 MsG0180001329.01.T01:intron 55.0%
! AAGGGTGGTAGCAAAGGTGC+TGG + Chr1:19541762-19541781 MsG0180001329.01.T01:intron 55.0%
!! CCACATACTTAGGGGGCGTT+TGG + Chr1:19545831-19545850 MsG0180001329.01.T01:intron 55.0%
AGATGGGGACAGAGGAGGCA+TGG + Chr1:19540616-19540635 MsG0180001329.01.T01:intron 60.0%
GCGGATCTTCATGGGAGCCA+TGG + Chr1:19543691-19543710 MsG0180001329.01.T01:intron 60.0%
GGTGGTAGCAAAGGTGGGGA+AGG + Chr1:19540433-19540452 MsG0180001329.01.T01:intron 60.0%
TCAACGGTTCGAGTCCTGCC+TGG - Chr1:19543887-19543906 None:intergenic 60.0%
TTACGCCCATGGCTGCAGGA+TGG + Chr1:19540730-19540749 MsG0180001329.01.T01:CDS 60.0%
Chromosome Type Strat End Strand Name
Chr1 gene 19539663 19550583 19539663 ID=MsG0180001329.01;Name=MsG0180001329.01
Chr1 mRNA 19539663 19550583 19539663 ID=MsG0180001329.01.T01;Parent=MsG0180001329.01;Name=MsG0180001329.01.T01;_AED=0.53;_eAED=0.53;_QI=0|0|0|0.66|1|1|15|0|734
Chr1 exon 19539663 19539719 19539663 ID=MsG0180001329.01.T01:exon:14389;Parent=MsG0180001329.01.T01
Chr1 exon 19539819 19540251 19539819 ID=MsG0180001329.01.T01:exon:14390;Parent=MsG0180001329.01.T01
Chr1 exon 19540618 19540751 19540618 ID=MsG0180001329.01.T01:exon:14391;Parent=MsG0180001329.01.T01
Chr1 exon 19542897 19543006 19542897 ID=MsG0180001329.01.T01:exon:14392;Parent=MsG0180001329.01.T01
Chr1 exon 19544222 19544330 19544222 ID=MsG0180001329.01.T01:exon:14393;Parent=MsG0180001329.01.T01
Chr1 exon 19546902 19547310 19546902 ID=MsG0180001329.01.T01:exon:14394;Parent=MsG0180001329.01.T01
Chr1 exon 19547865 19547902 19547865 ID=MsG0180001329.01.T01:exon:14395;Parent=MsG0180001329.01.T01
Chr1 exon 19547990 19548263 19547990 ID=MsG0180001329.01.T01:exon:14396;Parent=MsG0180001329.01.T01
Chr1 exon 19548368 19548466 19548368 ID=MsG0180001329.01.T01:exon:14397;Parent=MsG0180001329.01.T01
Chr1 exon 19548564 19548662 19548564 ID=MsG0180001329.01.T01:exon:14398;Parent=MsG0180001329.01.T01
Chr1 exon 19548755 19548853 19548755 ID=MsG0180001329.01.T01:exon:14399;Parent=MsG0180001329.01.T01
Chr1 exon 19548918 19549016 19548918 ID=MsG0180001329.01.T01:exon:14400;Parent=MsG0180001329.01.T01
Chr1 exon 19549642 19549740 19549642 ID=MsG0180001329.01.T01:exon:14401;Parent=MsG0180001329.01.T01
Chr1 exon 19550339 19550403 19550339 ID=MsG0180001329.01.T01:exon:14402;Parent=MsG0180001329.01.T01
Chr1 exon 19550503 19550583 19550503 ID=MsG0180001329.01.T01:exon:14403;Parent=MsG0180001329.01.T01
Chr1 CDS 19539663 19539719 19539663 ID=MsG0180001329.01.T01:cds;Parent=MsG0180001329.01.T01
Chr1 CDS 19539819 19540251 19539819 ID=MsG0180001329.01.T01:cds;Parent=MsG0180001329.01.T01
Chr1 CDS 19540618 19540751 19540618 ID=MsG0180001329.01.T01:cds;Parent=MsG0180001329.01.T01
Chr1 CDS 19542897 19543006 19542897 ID=MsG0180001329.01.T01:cds;Parent=MsG0180001329.01.T01
Chr1 CDS 19544222 19544330 19544222 ID=MsG0180001329.01.T01:cds;Parent=MsG0180001329.01.T01
Chr1 CDS 19546902 19547310 19546902 ID=MsG0180001329.01.T01:cds;Parent=MsG0180001329.01.T01
Chr1 CDS 19547865 19547902 19547865 ID=MsG0180001329.01.T01:cds;Parent=MsG0180001329.01.T01
Chr1 CDS 19547990 19548263 19547990 ID=MsG0180001329.01.T01:cds;Parent=MsG0180001329.01.T01
Chr1 CDS 19548368 19548466 19548368 ID=MsG0180001329.01.T01:cds;Parent=MsG0180001329.01.T01
Chr1 CDS 19548564 19548662 19548564 ID=MsG0180001329.01.T01:cds;Parent=MsG0180001329.01.T01
Chr1 CDS 19548755 19548853 19548755 ID=MsG0180001329.01.T01:cds;Parent=MsG0180001329.01.T01
Chr1 CDS 19548918 19549016 19548918 ID=MsG0180001329.01.T01:cds;Parent=MsG0180001329.01.T01
Chr1 CDS 19549642 19549740 19549642 ID=MsG0180001329.01.T01:cds;Parent=MsG0180001329.01.T01
Chr1 CDS 19550339 19550403 19550339 ID=MsG0180001329.01.T01:cds;Parent=MsG0180001329.01.T01
Chr1 CDS 19550503 19550583 19550503 ID=MsG0180001329.01.T01:cds;Parent=MsG0180001329.01.T01
Gene Sequence

>MsG0180001329.01.T01

ATGTCATTTCAAAATATCCCCGATTTTCATAGGATAATATTGAATGATAAGAAGCTTAGGATTCCCAAGAAGTATGTGGAGAACTTTTGGAAAAGAATATCAAACCCAATATTCCTTAAATTCCCAAATGGTGTTCAACAAAAAATATTTTGGGCGGAGAGTAATGGAGATATTTGGTTTCAAAAAAATTGGGAAAGTTTTGCAAAGTTTCTGAAATATGGTTATCTCTTAACTTTTAAATACATTGGTGGATCATATTTCAAGGTTCAGATATTTGGTGCCAATACTTTAGAAATAAATTATTCCAACATAAAACCCATTGATGAAGTTGTTGAAGCTACAGAAAAAGCTAAAGAAGGAGTTGAAGTGAGTGGTGATAGTGATAAGAGTTTAGATGAAAGTGAAATACCCACCCAAGCTCAAAGGACAAGAAAATATGGCAAGAGAAAAATAGTGGTGGATTTGGATACTACCCAGCCAAATTTCTCAGATGGGGACAGAGGAGGCATGGTTAAGAAGGCTAAAAAGTGCTCACCAGTGGAAGTTGTTAAAGAGAGTAGCCATAATGAGAATCCCTATTTTTATGTCACATTGCCACAATCTTACGCCCATGGCTGCAGGATGGTTGGTGATGAATGTAAATTTGTGATGACTCAAAGAGAACCACTTTCATTCACCGTTACTATTACTCCATCAAGGGAGCAACCAAAGCTTAAAGAAATTAATATCGCAAGGTTCTCTGAAGGTTGGAGACAATTCATAAAAGAATGCAAAGTGGAGATTGGAGATACTCTTCTCTTCAAGTTGATTGATGAGAGCAAGTTTGTGTTTGATGTTTCAATTAGGATTCCCAAGAAATATGTGGAGAAATTTTGGAAAGGAATATCAAACCCAATATTCCTTAACTTACCAAATGGTGTTCAACAAAAAATATTTTGGGTAGAGAATAATGGTGATATTTGGTTTCAAAAAAATTGGGATAATTTTGCAAAGTCTCTCAAATATGGAAATCTTTTAATTTTTAAATATATTGGTGGATCATATTTCAAGGTTAAGATATTTGGTGTCAATGCTTTAGAAATAGATTATTCCAATATAAAATCTGTTGATGAAGTTGTTGAAACTACAAAAGAAGCTAAAGAAATTGTTGATTTGACTGATGAGAGTGAAATACCAATGGAAGCTCAAATGATAACAAATGGGAAGAGAAAAATGAGTATAGATATTGACACTCTTAAGCAAAAATTCCCAGTTTTAATGACACAAACTTACGCCCATGGTCATATCTTGGTGATACCATGCAACTTTTCAAGATCATACTTGAACAAATTTGAAGGGATTGCAAGCTTAAGAGTTGGAGAGGACCCTGCTATGAAAGTGGATATAGTGTTTAACAATAAAAGATCTTCTAATTCTATGACTATTGGTTGGAAGTCATTTAACCAAAAATATAACTTAAAAGTTGGTGATATATGTAAATTTGTGATGACTCAAAGAGAACCACTTTTATTCACTATTACTATCACTAAATCCAACAAGGGACCAAACCCTAAGAAGTTGCAAGGTTATAAAGAAGGGATCTCTTCTGGTGATCGTGATATTCTAAAGAGGACAGACACTGGAGAAACTTGTAGGAGCCTTCCAAAAATGCATGCTCTTCAGGGTTATAAAGAAGATATCTCTTCTTGTGATCGTGATATTCTAAAGTGGAAAGACACTCGAGAAACTTGTAGGACCCTTCCAAAAGTGCATGCTCTTCAGGGTTATAAAGAAGGGATCTCTTATGGTGATCATGATATTCTAAAGAGGAAAGACGATGGAGAAACTTGTAGGACCCTTCCAAAAGTGCAAGCTCTTCATGGTTATAAAGAAGGGATCTCTTATGATGATCATGATATTCTAAAGAGGAAAGACATTGGAGAAACTTGTAGGACCCTTCCAAAAGAGCATGCTTCCCATGGTTATAAAGAAATGATCTCTTCTTATGAAAATAGTAATCTAAAGAGGAAATACATTGGAGAAACTTGTAGGAGCCGTCCAAAACTGCATGATCTACAGAAATCAAAGGGTCAAAACGTGATGAAACACAATACATTCAAGGTTTTGGTGAATTCCAAACACCCGCATGCACCAAAGAGATTTATGGAAAGAGGATGTCGTGAAAAATTTGTGGAGTTGAAAATGGGGGACAGTCATGGTTCGTAA
Protein sequence

>MsG0180001329.01.T01

MSFQNIPDFHRIILNDKKLRIPKKYVENFWKRISNPIFLKFPNGVQQKIFWAESNGDIWFQKNWESFAKFLKYGYLLTFKYIGGSYFKVQIFGANTLEINYSNIKPIDEVVEATEKAKEGVEVSGDSDKSLDESEIPTQAQRTRKYGKRKIVVDLDTTQPNFSDGDRGGMVKKAKKCSPVEVVKESSHNENPYFYVTLPQSYAHGCRMVGDECKFVMTQREPLSFTVTITPSREQPKLKEINIARFSEGWRQFIKECKVEIGDTLLFKLIDESKFVFDVSIRIPKKYVEKFWKGISNPIFLNLPNGVQQKIFWVENNGDIWFQKNWDNFAKSLKYGNLLIFKYIGGSYFKVKIFGVNALEIDYSNIKSVDEVVETTKEAKEIVDLTDESEIPMEAQMITNGKRKMSIDIDTLKQKFPVLMTQTYAHGHILVIPCNFSRSYLNKFEGIASLRVGEDPAMKVDIVFNNKRSSNSMTIGWKSFNQKYNLKVGDICKFVMTQREPLLFTITITKSNKGPNPKKLQGYKEGISSGDRDILKRTDTGETCRSLPKMHALQGYKEDISSCDRDILKWKDTRETCRTLPKVHALQGYKEGISYGDHDILKRKDDGETCRTLPKVQALHGYKEGISYDDHDILKRKDIGETCRTLPKEHASHGYKEMISSYENSNLKRKYIGETCRSRPKLHDLQKSKGQNVMKHNTFKVLVNSKHPHAPKRFMERGCREKFVELKMGDSHGS*