AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180001809.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180001809.01.T02 MTR_1g043540 79.032 62 12 1 1 62 53 113 1.14e-26 95.9
MsG0180001809.01.T02 MTR_1g056470 57.143 70 26 1 1 70 182 247 2.01e-20 82.8
MsG0180001809.01.T02 MTR_5g093460 65.079 63 22 0 1 63 314 376 3.98e-19 80.9
MsG0180001809.01.T02 MTR_8g106940 57.143 70 26 1 1 70 186 251 1.44e-18 78.6
MsG0180001809.01.T02 MTR_6g065170 57.143 70 26 1 1 70 186 251 5.28e-17 74.3
MsG0180001809.01.T02 MTR_3g018640 54.286 70 28 1 1 70 186 251 1.28e-15 70.5
MsG0180001809.01.T02 MTR_3g053170 52.381 63 30 0 1 63 174 236 2.65e-13 63.9
MsG0180001809.01.T02 MTR_1g043500 50.000 62 26 2 11 71 3 60 1.64e-11 55.5
MsG0180001809.01.T01 MTR_1g043540 76.238 101 23 1 1 101 14 113 9.96e-47 148
MsG0180001809.01.T01 MTR_1g056470 59.633 109 40 1 1 109 143 247 1.08e-39 134
MsG0180001809.01.T01 MTR_8g106940 57.798 109 42 1 1 109 147 251 2.69e-35 124
MsG0180001809.01.T01 MTR_6g065170 58.716 109 41 1 1 109 147 251 1.92e-34 122
MsG0180001809.01.T01 MTR_5g093460 61.765 102 39 0 1 102 275 376 2.19e-33 121
MsG0180001809.01.T01 MTR_3g018640 58.716 109 41 1 1 109 147 251 1.06e-32 117
MsG0180001809.01.T01 MTR_3g053170 56.863 102 44 0 1 102 135 236 5.72e-30 110
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180001809.01.T02 AT3G20800 53.968 63 29 0 1 63 187 249 2.29e-14 67.0
MsG0180001809.01.T02 AT5G12980 50.794 63 31 0 1 63 183 245 8.70e-12 60.1
MsG0180001809.01.T01 AT3G20800 57.843 102 43 0 1 102 148 249 4.65e-31 113
MsG0180001809.01.T01 AT5G12980 53.922 102 47 0 1 102 144 245 1.42e-27 104

Find 7 sgRNAs with CRISPR-Local

Find 574 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGTCATTGGTGTCGTGATTA+AGG 0.300370 1:-27448573 MsG0180001809.01.T01:intron
CTTGCTAGTCTTGTAGTCAT+TGG 0.367453 1:-27448587 MsG0180001809.01.T01:CDS
ATGAAAACCTATGACTTCAT+TGG 0.369820 1:+27448120 None:intergenic
GTTAAAACCAATGAAGTCAT+AGG 0.369841 1:-27448127 MsG0180001809.01.T01:CDS
TCCATGTTGCGCAAACATAA+TGG 0.380662 1:+27448079 None:intergenic
TAGTATAATTTGAGCATTTG+AGG 0.408290 1:-27448610 None:intergenic
TCCATTATGTTTGCGCAACA+TGG 0.483941 1:-27448080 MsG0180001809.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTTATTTTTTTTAAAT+TGG + Chr1:27437899-27437880 None:intergenic 0.0%
!! AAAAAGATTTAATAAAATTC+TGG - Chr1:27438186-27438205 MsG0180001809.01.T01:intron 10.0%
!! AAAAATTCATATTAGTTATT+TGG - Chr1:27440741-27440760 MsG0180001809.01.T01:intron 10.0%
!! AATATAATAAAAGAATGAAA+AGG - Chr1:27445148-27445167 MsG0180001809.01.T01:intron 10.0%
!! ATAATCAAAATATTATGTAA+AGG + Chr1:27437679-27437698 None:intergenic 10.0%
!! ATATAATAAAAGAATGAAAA+GGG - Chr1:27445149-27445168 MsG0180001809.01.T01:intron 10.0%
!! GTAATAAATAAAACATAAAA+TGG + Chr1:27437456-27437475 None:intergenic 10.0%
!! TAAAAAGATTTAAAAAATTC+TGG + Chr1:27438511-27438530 None:intergenic 10.0%
!! TAAAAATTAGAAAAAAAATC+AGG + Chr1:27438786-27438805 None:intergenic 10.0%
!! TACATATATACAATATTATT+GGG + Chr1:27442544-27442563 None:intergenic 10.0%
!! TTACATATATACAATATTAT+TGG + Chr1:27442545-27442564 None:intergenic 10.0%
!! TTTATACAAAGAAAAAAATT+TGG - Chr1:27438723-27438742 MsG0180001809.01.T01:intron 10.0%
!!! AATTATTTCTTTATTCTTAT+TGG + Chr1:27447290-27447309 None:intergenic 10.0%
!!! ACATAACTAAAATTTTATAT+AGG - Chr1:27441569-27441588 MsG0180001809.01.T01:intron 10.0%
!!! AGATTTTTTTAAAAAAATTC+TGG + Chr1:27438437-27438456 None:intergenic 10.0%
!!! ATAGTAAGTTTTAAAATTAT+AGG - Chr1:27439659-27439678 MsG0180001809.01.T01:intron 10.0%
!!! CCAATATTTTATAAAAATTA+TGG + Chr1:27438687-27438706 None:intergenic 10.0%
!!! CCATAATTTTTATAAAATAT+TGG - Chr1:27438684-27438703 MsG0180001809.01.T01:intron 10.0%
!!! GAATTTTTTTAAAAAAAATC+TGG + Chr1:27438764-27438783 None:intergenic 10.0%
!!! GTTTTGATTTTTAAATTTTT+TGG + Chr1:27438099-27438118 None:intergenic 10.0%
!!! TGAATATTTTTATGATTTTT+TGG + Chr1:27437983-27438002 None:intergenic 10.0%
!!! TTTATGTTTTATTTATTACA+TGG - Chr1:27437457-27437476 MsG0180001809.01.T01:intron 10.0%
!!! TTTTATTTCATATTTAAACA+TGG - Chr1:27441462-27441481 MsG0180001809.01.T01:intron 10.0%
!!! TTTTCGATTTTTTAAATTTT+TGG + Chr1:27438014-27438033 None:intergenic 10.0%
!!! TTTTTAATTTTAGAAAAATC+TGG - Chr1:27438525-27438544 MsG0180001809.01.T01:intron 10.0%
!! AAAAATTCATATTAGTTACT+TGG - Chr1:27437335-27437354 MsG0180001809.01.T01:intron 15.0%
!! AAAAATTTATATTAGCTACT+TGG - Chr1:27447891-27447910 MsG0180001809.01.T01:intron 15.0%
!! AAACATATTATTTGATATCA+TGG + Chr1:27441608-27441627 None:intergenic 15.0%
!! AAATATGAGTAAAGTAAAAA+GGG + Chr1:27439146-27439165 None:intergenic 15.0%
!! AACATATTATTTGATATCAT+GGG + Chr1:27441607-27441626 None:intergenic 15.0%
!! AATACTATGTAAAGATAAAT+TGG + Chr1:27441078-27441097 None:intergenic 15.0%
!! AATATTATGTAAAGGTAAAT+TGG + Chr1:27437671-27437690 None:intergenic 15.0%
!! AATTATAAACTTTGGTAAAT+TGG - Chr1:27445060-27445079 MsG0180001809.01.T01:intron 15.0%
!! AATTCAAAAAAAATGTTGTT+AGG - Chr1:27439249-27439268 MsG0180001809.01.T01:intron 15.0%
!! AATTCATATATGATATTCTT+CGG + Chr1:27440455-27440474 None:intergenic 15.0%
!! ACATGAAAAATTATAAACTT+TGG - Chr1:27445052-27445071 MsG0180001809.01.T01:intron 15.0%
!! ATAAACAAGTACAAAAAAAA+AGG - Chr1:27444149-27444168 MsG0180001809.01.T01:intron 15.0%
!! ATCAACATAAATAATCAATA+AGG + Chr1:27440536-27440555 None:intergenic 15.0%
!! ATCATATGAAAATAAGAAAT+AGG - Chr1:27443281-27443300 MsG0180001809.01.T01:intron 15.0%
!! ATGGTTTAAAAAAAATAAGA+AGG + Chr1:27448282-27448301 None:intergenic 15.0%
!! CAAAATTCTCTATATTTATA+AGG - Chr1:27445413-27445432 MsG0180001809.01.T01:intron 15.0%
!! GATTAAGAAAACAATATTAA+AGG + Chr1:27445563-27445582 None:intergenic 15.0%
!! TAAAAAATCAGAAAAGAAAA+AGG - Chr1:27444232-27444251 MsG0180001809.01.T01:intron 15.0%
!! TACACATGATATAATATAAT+AGG + Chr1:27441792-27441811 None:intergenic 15.0%
!! TATAAAATATTGGAAAAAGT+TGG - Chr1:27438694-27438713 MsG0180001809.01.T01:intron 15.0%
!! TATATAAAGAAGATTTAAGT+AGG + Chr1:27447975-27447994 None:intergenic 15.0%
!! TGCAAATAAATTAAATACTT+TGG + Chr1:27437253-27437272 None:intergenic 15.0%
!! TTAAAAATAAAAATCTGATG+TGG + Chr1:27437924-27437943 None:intergenic 15.0%
!! TTGTCATATATGATATTATT+GGG + Chr1:27442465-27442484 None:intergenic 15.0%
!! TTTAAAAAGAAGAAATAGTT+AGG - Chr1:27442597-27442616 MsG0180001809.01.T01:intron 15.0%
!! TTTAATAATAAAATCTGATG+TGG - Chr1:27438931-27438950 MsG0180001809.01.T01:intron 15.0%
!! TTTGTCATATATGATATTAT+TGG + Chr1:27442466-27442485 None:intergenic 15.0%
!!! AAATTTAATTTTTGAGAATC+TGG + Chr1:27438410-27438429 None:intergenic 15.0%
!!! AATAATAATCTTTGTTTTTG+TGG + Chr1:27447748-27447767 None:intergenic 15.0%
!!! AATTTTATTTCGTATTAAAC+AGG - Chr1:27439498-27439517 MsG0180001809.01.T01:intron 15.0%
!!! AATTTTCAAAATTACAAAAG+AGG - Chr1:27438214-27438233 MsG0180001809.01.T01:intron 15.0%
!!! ATTTTATTTCGTATTAAACA+GGG - Chr1:27439499-27439518 MsG0180001809.01.T01:intron 15.0%
!!! CACACAATATTTTATTTATA+TGG + Chr1:27447251-27447270 None:intergenic 15.0%
!!! TAAATTTCTGGAAAAAATTT+AGG - Chr1:27438629-27438648 MsG0180001809.01.T01:intron 15.0%
!!! TATAAGAATTTGTTTCAAAT+AGG - Chr1:27442779-27442798 MsG0180001809.01.T01:intron 15.0%
!!! TGAAAGTAGTTTTTTATTAT+AGG - Chr1:27447785-27447804 MsG0180001809.01.T01:intron 15.0%
!!! TGATTATATGATTTTTACTT+GGG - Chr1:27437692-27437711 MsG0180001809.01.T01:intron 15.0%
!!! TTACATAGTATTTTGTTTAT+AGG - Chr1:27441086-27441105 MsG0180001809.01.T01:intron 15.0%
!!! TTATTTATATGGATTTTACT+TGG + Chr1:27447240-27447259 None:intergenic 15.0%
!!! TTGATTATATGATTTTTACT+TGG - Chr1:27437691-27437710 MsG0180001809.01.T01:intron 15.0%
!!! TTTATTTTCTTTCAAAGTTT+CGG + Chr1:27440007-27440026 None:intergenic 15.0%
!!! TTTCAATTTTTTAATTACGT+AGG - Chr1:27443116-27443135 MsG0180001809.01.T01:intron 15.0%
!!! TTTTTTCGAAAATAAATTTC+TGG - Chr1:27438617-27438636 MsG0180001809.01.T01:intron 15.0%
!! AAACTTTCATTTGTAGATAT+TGG - Chr1:27440280-27440299 MsG0180001809.01.T01:intron 20.0%
!! AACATAAACATAAAAAGCTA+TGG - Chr1:27444366-27444385 MsG0180001809.01.T01:intron 20.0%
!! ACAAGACTTCAAAAAAAAAT+CGG - Chr1:27445998-27446017 MsG0180001809.01.T01:intron 20.0%
!! ACTTGTTTCATGTTAAAATA+AGG + Chr1:27439979-27439998 None:intergenic 20.0%
!! ACTTTAGTAGAAATATCATT+TGG + Chr1:27445806-27445825 None:intergenic 20.0%
!! ATAAAATGATTTCCCAAAAT+GGG + Chr1:27443482-27443501 None:intergenic 20.0%
!! ATAATATTCTCTTCTTATCA+TGG + Chr1:27440597-27440616 None:intergenic 20.0%
!! ATAGATAAACAACTTTCATA+TGG - Chr1:27447162-27447181 MsG0180001809.01.T01:intron 20.0%
!! ATGTGAAACTTAAATAGAAT+TGG + Chr1:27440711-27440730 None:intergenic 20.0%
!! CATCGTAAAAAAAAAATTTC+CGG - Chr1:27437792-27437811 MsG0180001809.01.T01:intron 20.0%
!! GAAATATGAGTAAAGTAAAA+AGG + Chr1:27439147-27439166 None:intergenic 20.0%
!! GGATTACAAAAAAATTAAGA+AGG + Chr1:27439169-27439188 None:intergenic 20.0%
!! GTATAATGAAAAACTACTTT+AGG + Chr1:27437231-27437250 None:intergenic 20.0%
!! TAGATATCATGTATGAAAAA+GGG + Chr1:27440929-27440948 None:intergenic 20.0%
!! TATAAAAAGAGAGAATTACA+AGG - Chr1:27446133-27446152 MsG0180001809.01.T01:intron 20.0%
!! TATACATCATATCATATAGT+AGG + Chr1:27439836-27439855 None:intergenic 20.0%
!! TGATAAACTACGAAAAAATA+TGG + Chr1:27448041-27448060 None:intergenic 20.0%
!! TTCATATACAAAGAAGAAAT+AGG + Chr1:27437424-27437443 None:intergenic 20.0%
!! TTCTTATATAAAGACGAAAT+AGG + Chr1:27440830-27440849 None:intergenic 20.0%
!! TTGTAACAAACGTAAATAAA+TGG + Chr1:27448508-27448527 None:intergenic 20.0%
!! TTTATTGTTCTTAAATGTGA+AGG - Chr1:27444189-27444208 MsG0180001809.01.T01:intron 20.0%
!!! AAATCTTTAAAGGCTAAATT+TGG - Chr1:27445939-27445958 MsG0180001809.01.T01:intron 20.0%
!!! AAATTTTTTTTTTACGATGG+TGG + Chr1:27437791-27437810 None:intergenic 20.0%
!!! AACATATTTTAGAAAGATGA+AGG - Chr1:27444618-27444637 MsG0180001809.01.T01:intron 20.0%
!!! AATCTTTAAAGGCTAAATTT+GGG - Chr1:27445940-27445959 MsG0180001809.01.T01:intron 20.0%
!!! ATCAAATCGAAAATTTTACA+AGG + Chr1:27437766-27437785 None:intergenic 20.0%
!!! ATGTTTATATGCATTTTACT+TGG + Chr1:27442298-27442317 None:intergenic 20.0%
!!! ATTGTAGTTAGTTTGTATAT+AGG - Chr1:27444795-27444814 MsG0180001809.01.T01:intron 20.0%
!!! ATTTAGCCTTTAAAGATTTT+TGG + Chr1:27445938-27445957 None:intergenic 20.0%
!!! ATTTTCTCCTTTATGTATTT+GGG + Chr1:27445112-27445131 None:intergenic 20.0%
!!! CGAAATTTTTTTTTTTACGA+GGG - Chr1:27439044-27439063 MsG0180001809.01.T01:intron 20.0%
!!! CTTTATGTTTTATTTCTTAG+AGG - Chr1:27448011-27448030 MsG0180001809.01.T01:intron 20.0%
!!! GAGAAAGTACAAAAAAAATA+TGG + Chr1:27440892-27440911 None:intergenic 20.0%
!!! GGATTAGTAAAAAATTAAGA+AGG + Chr1:27441133-27441152 None:intergenic 20.0%
!!! TCAAATCGAAAATTTTACAA+GGG + Chr1:27437765-27437784 None:intergenic 20.0%
!!! TCGAAATTTTTTTTTTTACG+AGG - Chr1:27439043-27439062 MsG0180001809.01.T01:intron 20.0%
!!! TGTACTTTTTTGTTTGTTTT+GGG + Chr1:27444038-27444057 None:intergenic 20.0%
!!! TGTGAAAACTATTTTATCAT+AGG - Chr1:27443577-27443596 MsG0180001809.01.T01:intron 20.0%
!!! TTGTACTTTTTTGTTTGTTT+TGG + Chr1:27444039-27444058 None:intergenic 20.0%
!!! TTTATTTTCTTTCGAAGTTT+TGG + Chr1:27441963-27441982 None:intergenic 20.0%
! AAAATGTTGTTAGACAATGT+TGG + Chr1:27440226-27440245 None:intergenic 25.0%
! AAGAAAACCTATAACTTCTT+TGG - Chr1:27442433-27442452 MsG0180001809.01.T01:intron 25.0%
! AATCTGGATACAAATTTAGA+GGG + Chr1:27438394-27438413 None:intergenic 25.0%
! ACTTCTTTCATATTGAAACA+AGG - Chr1:27447541-27447560 MsG0180001809.01.T01:intron 25.0%
! AGCAAAGTTATCAATCATAT+AGG - Chr1:27446080-27446099 MsG0180001809.01.T01:intron 25.0%
! AGTTGTATATCTATGAACAT+TGG + Chr1:27442215-27442234 None:intergenic 25.0%
! ATAAGGCATAATGTTAATGT+TGG - Chr1:27446930-27446949 MsG0180001809.01.T01:intron 25.0%
! ATACGACTTAATAAACACAT+AGG + Chr1:27447717-27447736 None:intergenic 25.0%
! ATATATATGAACAGAGATCA+TGG - Chr1:27443366-27443385 MsG0180001809.01.T01:intron 25.0%
! ATCAACATACATAATCAACA+AGG + Chr1:27437133-27437152 None:intergenic 25.0%
! ATCAATGCATTATGTATGTA+TGG + Chr1:27445183-27445202 None:intergenic 25.0%
! ATCATAAGTTTCAACAAATG+AGG + Chr1:27441338-27441357 None:intergenic 25.0%
! ATGAATAGAACTCATAACAT+AGG - Chr1:27443731-27443750 MsG0180001809.01.T01:intron 25.0%
! ATGTAAAACTTAAATAGACC+TGG + Chr1:27447860-27447879 None:intergenic 25.0%
! ATGTTATGAGTTCTATTCAT+AGG + Chr1:27443731-27443750 None:intergenic 25.0%
! ATTTGTACGCAATATCAAAA+GGG - Chr1:27445201-27445220 MsG0180001809.01.T01:intron 25.0%
! CAACTTTCATATGGATATTA+TGG - Chr1:27447171-27447190 MsG0180001809.01.T01:intron 25.0%
! CAATTTCATCAATTGTCTTA+TGG - Chr1:27441531-27441550 MsG0180001809.01.T01:intron 25.0%
! CAATTTCATCATTTGTCTTA+TGG - Chr1:27439568-27439587 MsG0180001809.01.T01:intron 25.0%
! CATAAGACAATTGATGAAAT+TGG + Chr1:27441533-27441552 None:intergenic 25.0%
! CCATTAAAATCAGTAATGAA+GGG + Chr1:27443912-27443931 None:intergenic 25.0%
! CTAACAAACGTGATTAAATT+CGG - Chr1:27444514-27444533 MsG0180001809.01.T01:intron 25.0%
! CTAGATATCATGTATGAAAA+AGG + Chr1:27440930-27440949 None:intergenic 25.0%
! GATAAAATGATTTCCCAAAA+TGG + Chr1:27443483-27443502 None:intergenic 25.0%
! GATGACAAAAATAATCATGA+AGG - Chr1:27447205-27447224 MsG0180001809.01.T01:intron 25.0%
! GGATATTATGGTAAGAAAAT+GGG - Chr1:27447183-27447202 MsG0180001809.01.T01:intron 25.0%
! GTTAAAACCAAAGAAGTTAT+AGG + Chr1:27442443-27442462 None:intergenic 25.0%
! TAACAAATTGTCTTCTTAAC+AGG + Chr1:27441900-27441919 None:intergenic 25.0%
! TAATGAAAAACTACTTTAGG+CGG + Chr1:27437228-27437247 None:intergenic 25.0%
! TACATATGAAAATAACTCGT+TGG - Chr1:27443411-27443430 MsG0180001809.01.T01:intron 25.0%
! TACGACTTAATAAACACATA+GGG + Chr1:27447716-27447735 None:intergenic 25.0%
! TAGCAACCTTGAAAAATATT+TGG + Chr1:27447065-27447084 None:intergenic 25.0%
! TATACAAAGAAGAAATAGGT+AGG + Chr1:27437420-27437439 None:intergenic 25.0%
! TATATATGAACAGAGATCAT+GGG - Chr1:27443367-27443386 MsG0180001809.01.T01:intron 25.0%
! TATATGAATTTGAGCATTTG+AGG - Chr1:27440465-27440484 MsG0180001809.01.T01:intron 25.0%
! TATGTGTTTATTAAGTCGTA+TGG - Chr1:27447716-27447735 MsG0180001809.01.T01:intron 25.0%
! TGAGAAACTGCAAAAAAATA+TGG + Chr1:27437486-27437505 None:intergenic 25.0%
! TGGATATTATGGTAAGAAAA+TGG - Chr1:27447182-27447201 MsG0180001809.01.T01:intron 25.0%
! TGTGACATATAAGAATAACA+TGG + Chr1:27441362-27441381 None:intergenic 25.0%
! TTCAACTATAACCTTTCTAT+TGG - Chr1:27446614-27446633 MsG0180001809.01.T01:intron 25.0%
! TTCAATAGCACTTAAGATTA+TGG + Chr1:27448554-27448573 None:intergenic 25.0%
! TTGTACTTGTTTATGTTCTT+TGG + Chr1:27444143-27444162 None:intergenic 25.0%
! TTGTTACCAAAATCTGATAA+TGG - Chr1:27448304-27448323 MsG0180001809.01.T01:intron 25.0%
! TTGTTACCAATATCTACTAA+TGG - Chr1:27441157-27441176 MsG0180001809.01.T01:intron 25.0%
! TTTATAAGCATCAACAAACA+AGG + Chr1:27447416-27447435 None:intergenic 25.0%
!! AATGAATCATTTGACTTCTT+TGG - Chr1:27440423-27440442 MsG0180001809.01.T01:intron 25.0%
!! ACAAAATTCACTCTTGTTAT+AGG + Chr1:27445296-27445315 None:intergenic 25.0%
!! ATACATTTAGTCTCTCTTTT+AGG + Chr1:27445345-27445364 None:intergenic 25.0%
!! ATCAAACCGAAAATTTTACA+AGG - Chr1:27439072-27439091 MsG0180001809.01.T01:intron 25.0%
!! CAAAATTCACTCTTGTTATA+GGG + Chr1:27445295-27445314 None:intergenic 25.0%
!! CATTTTCTCCTTTATGTATT+TGG + Chr1:27445113-27445132 None:intergenic 25.0%
!! CTTATAGCATAATAGCTTTT+AGG - Chr1:27439717-27439736 MsG0180001809.01.T01:intron 25.0%
!! CTTTTGTTACCAATATCTAA+TGG + Chr1:27442242-27442261 None:intergenic 25.0%
!! GATCTTACGAAGAAATATTT+TGG + Chr1:27445538-27445557 None:intergenic 25.0%
!! GTAGATATTGGTAACAAAAA+TGG + Chr1:27441154-27441173 None:intergenic 25.0%
!! GTTTGTCTTAATCTTTTAAG+AGG + Chr1:27442919-27442938 None:intergenic 25.0%
!! TCAAACCGAAAATTTTACAA+GGG - Chr1:27439073-27439092 MsG0180001809.01.T01:intron 25.0%
!! TTAGATATTGGTAACAAAAG+TGG - Chr1:27442242-27442261 MsG0180001809.01.T01:intron 25.0%
!! TTTGTATCTTTTTACGTTGA+AGG + Chr1:27444316-27444335 None:intergenic 25.0%
!! TTTTCATACATGATATCTAG+AGG - Chr1:27440930-27440949 MsG0180001809.01.T01:intron 25.0%
!! TTTTCTCCTTTATGTATTTG+GGG + Chr1:27445111-27445130 None:intergenic 25.0%
!!! AATATTTTTCAAGGTTGCTA+AGG - Chr1:27447065-27447084 MsG0180001809.01.T01:intron 25.0%
!!! AATGCATTTTTTACCTCATA+TGG + Chr1:27445978-27445997 None:intergenic 25.0%
!!! AATTTTAGTTATGTCACAAG+AGG + Chr1:27441563-27441582 None:intergenic 25.0%
!!! ACAAAAATGTTTTGAGAACT+AGG - Chr1:27444701-27444720 MsG0180001809.01.T01:intron 25.0%
!!! ATTAAGAAAGTGTTGTTAGA+CGG + Chr1:27442182-27442201 None:intergenic 25.0%
!!! ATTGAGTCAATTTTGTTTCA+AGG - Chr1:27444590-27444609 MsG0180001809.01.T01:intron 25.0%
!!! ATTTTAGAAAGATGAAGGTT+AGG - Chr1:27444623-27444642 MsG0180001809.01.T01:intron 25.0%
!!! ATTTTTTCTTCTTTCAAAGC+TGG - Chr1:27441434-27441453 MsG0180001809.01.T01:intron 25.0%
!!! CAAAAATGTTTTGAGAACTA+GGG - Chr1:27444702-27444721 MsG0180001809.01.T01:intron 25.0%
!!! CCTTCATTACTGATTTTAAT+GGG - Chr1:27443910-27443929 MsG0180001809.01.T01:intron 25.0%
!!! CGGAAATTTTTTTTTTACGA+TGG + Chr1:27437794-27437813 None:intergenic 25.0%
!!! CTGAAATTTTTAGCATGTTT+TGG + Chr1:27444285-27444304 None:intergenic 25.0%
!!! CTTCATTACTGATTTTAATG+GGG - Chr1:27443911-27443930 MsG0180001809.01.T01:intron 25.0%
!!! GCTAAATCTATTTTTCTCTA+TGG + Chr1:27444451-27444470 None:intergenic 25.0%
!!! GTTAAGAAGACAATTTGTTA+AGG - Chr1:27441900-27441919 MsG0180001809.01.T01:intron 25.0%
!!! GTTAGTTTGTATATAGGAAA+CGG - Chr1:27444801-27444820 MsG0180001809.01.T01:intron 25.0%
!!! TCAGATTTTGGTAACAAAAA+TGG + Chr1:27448301-27448320 None:intergenic 25.0%
!!! TTAGTTTGTATATAGGAAAC+GGG - Chr1:27444802-27444821 MsG0180001809.01.T01:intron 25.0%
!!! TTGAGTCAATTTTGTTTCAA+GGG - Chr1:27444591-27444610 MsG0180001809.01.T01:intron 25.0%
!!! TTGGAAATTTTTAGCATGTT+TGG + Chr1:27441514-27441533 None:intergenic 25.0%
!!! TTTTAGAAAGATGAAGGTTA+GGG - Chr1:27444624-27444643 MsG0180001809.01.T01:intron 25.0%
!!! TTTTTCAAAATATCGCATGT+GGG + Chr1:27440070-27440089 None:intergenic 25.0%
AAATTATCTCGCTTGAAAGA+AGG + Chr1:27440981-27441000 None:intergenic 30.0%
AAGGAAACCTAAGACATATA+TGG + Chr1:27440962-27440981 None:intergenic 30.0%
AAGGAAATCTATGACTTCTT+TGG + Chr1:27448110-27448129 None:intergenic 30.0%
AAGGAGCCAAAAATCTTTAA+AGG - Chr1:27445929-27445948 MsG0180001809.01.T01:intron 30.0%
AAGGTTATAGTTGAAGCTTT+AGG + Chr1:27446609-27446628 None:intergenic 30.0%
AATACATATGACCAAAACTC+AGG - Chr1:27443689-27443708 MsG0180001809.01.T01:intron 30.0%
AATTGTTACGAAACTCTAAG+AGG - Chr1:27443185-27443204 MsG0180001809.01.T01:intron 30.0%
ACTGGACTTCAATTCTATAT+GGG - Chr1:27444759-27444778 MsG0180001809.01.T01:intron 30.0%
ATAAATCGGTATTAGCAAGT+TGG + Chr1:27447927-27447946 None:intergenic 30.0%
ATAATTCGTTCAAATCGGAT+GGG + Chr1:27444951-27444970 None:intergenic 30.0%
ATGAAAACCTATGACTTCAT+TGG + Chr1:27437555-27437574 None:intergenic 30.0%
ATGAAGTGATCTTAACAAGA+TGG - Chr1:27442645-27442664 MsG0180001809.01.T01:intron 30.0%
ATTAACACAGTTTGAGTATG+AGG - Chr1:27447617-27447636 MsG0180001809.01.T01:intron 30.0%
ATTATAAGCTTCAACAAACG+AGG + Chr1:27439374-27439393 None:intergenic 30.0%
CAACTTTCACCATTAGATAT+TGG - Chr1:27442230-27442249 MsG0180001809.01.T01:intron 30.0%
CACATTCCATTAGTAGATAT+TGG + Chr1:27441166-27441185 None:intergenic 30.0%
CCCATTAAAATCAGTAATGA+AGG + Chr1:27443913-27443932 None:intergenic 30.0%
CGAATTTAATCACGTTTGTT+AGG + Chr1:27444516-27444535 None:intergenic 30.0%
CTAGCTTATAACTCACTAAA+GGG - Chr1:27446549-27446568 MsG0180001809.01.T01:intron 30.0%
CTTGTGTTTAATAAGTCGTA+TGG - Chr1:27437160-27437179 MsG0180001809.01.T01:CDS 30.0%
GAAACACGTAGAGTAATTAA+AGG + Chr1:27445713-27445732 None:intergenic 30.0%
GAATCTGGATACAAATTTAG+AGG + Chr1:27438395-27438414 None:intergenic 30.0%
GATTTGTACGCAATATCAAA+AGG - Chr1:27445200-27445219 MsG0180001809.01.T01:intron 30.0%
GCATCAACATGAAGAAAATA+AGG - Chr1:27446913-27446932 MsG0180001809.01.T01:intron 30.0%
GTGACTAAAAAGAAGATACA+AGG - Chr1:27445382-27445401 MsG0180001809.01.T01:intron 30.0%
GTTAAAACCAATGAAGTCAT+AGG - Chr1:27437545-27437564 MsG0180001809.01.T01:intron 30.0%
GTTAACACCATATATGTCTT+AGG - Chr1:27440952-27440971 MsG0180001809.01.T01:intron 30.0%
TACAAACCTTTCAAAGATCT+TGG - Chr1:27444538-27444557 MsG0180001809.01.T01:intron 30.0%
TACATATGAACAGAACTCAA+AGG - Chr1:27443448-27443467 MsG0180001809.01.T01:intron 30.0%
TCAAGCTTATATACTCTAGT+TGG - Chr1:27444736-27444755 MsG0180001809.01.T01:intron 30.0%
TCTTATCTGTGTAATGAGTT+TGG + Chr1:27443344-27443363 None:intergenic 30.0%
TGAACGAAAACTTCATTACA+AGG - Chr1:27446239-27446258 MsG0180001809.01.T01:intron 30.0%
TGAAGCTAGTGGTTATTAAA+AGG - Chr1:27445252-27445271 MsG0180001809.01.T01:intron 30.0%
TTAAGTACACTAGTACTTTG+AGG + Chr1:27441701-27441720 None:intergenic 30.0%
TTAATAAACACATAGGGTAG+TGG + Chr1:27447710-27447729 None:intergenic 30.0%
TTGAGAATGTACGAATTCAT+TGG - Chr1:27442501-27442520 MsG0180001809.01.T01:intron 30.0%
TTGGACAAACATTGAAAAAC+CGG + Chr1:27444975-27444994 None:intergenic 30.0%
TTGTCATACATGAAGTCTAA+AGG - Chr1:27448078-27448097 MsG0180001809.01.T01:CDS 30.0%
TTGTTACCAATATCTGCTAA+TGG - Chr1:27439193-27439212 MsG0180001809.01.T01:intron 30.0%
TTTCAAAGATCTTGGAAAGT+GGG - Chr1:27444546-27444565 MsG0180001809.01.T01:intron 30.0%
TTTGACAAACGTGAATAACA+TGG - Chr1:27442037-27442056 MsG0180001809.01.T01:intron 30.0%
! ACAAGCATATTTCATCCTTT+TGG - Chr1:27442937-27442956 MsG0180001809.01.T01:intron 30.0%
! ACTAGCTTATAACTCACTAA+AGG - Chr1:27446548-27446567 MsG0180001809.01.T01:intron 30.0%
! AGGATGTAATACTTTTACCA+AGG + Chr1:27440516-27440535 None:intergenic 30.0%
! CATTGCTGAGATTATTTTCT+AGG + Chr1:27446740-27446759 None:intergenic 30.0%
! CTTCTAGTATGATAGCTTTA+AGG - Chr1:27441675-27441694 MsG0180001809.01.T01:intron 30.0%
! GAGATTATTTTCTAGGTCAT+CGG + Chr1:27446733-27446752 None:intergenic 30.0%
! GAGGTAAAGTGTTTGAATAT+AGG - Chr1:27443204-27443223 MsG0180001809.01.T01:intron 30.0%
! GCAGATATTGGTAACAAAAA+TGG + Chr1:27439190-27439209 None:intergenic 30.0%
! TGGATGCCAAATATTTTTCA+AGG - Chr1:27447056-27447075 MsG0180001809.01.T01:intron 30.0%
! TGTAATGAAGTTTTCGTTCA+AGG + Chr1:27446239-27446258 None:intergenic 30.0%
! TTTCGCCCTTGTAAAATTTT+CGG + Chr1:27437776-27437757 None:intergenic 30.0%
! TTTTCATGTCAGAAACAACA+TGG + Chr1:27445041-27445060 None:intergenic 30.0%
! TTTTCCTTTGCAAACAAGAT+GGG + Chr1:27446888-27446907 None:intergenic 30.0%
! TTTTTCCTTTGCAAACAAGA+TGG + Chr1:27446889-27446908 None:intergenic 30.0%
!! AGTTTTATATCTATGCACGT+AGG + Chr1:27440265-27440284 None:intergenic 30.0%
!! ATATAAGAAGAGTGCTAGTA+TGG + Chr1:27439774-27439793 None:intergenic 30.0%
!! ATTGTTTTATCTACATCGTG+AGG - Chr1:27437382-27437401 MsG0180001809.01.T01:intron 30.0%
!! CTCTTTTAGGAGTAAAAAGT+GGG + Chr1:27445332-27445351 None:intergenic 30.0%
!! GTTTTTCAAAATATCGCATG+TGG + Chr1:27440071-27440090 None:intergenic 30.0%
!! TACCAAAATCTGATAATGGA+AGG - Chr1:27448308-27448327 MsG0180001809.01.T01:intron 30.0%
!! TCTCTTTTAGGAGTAAAAAG+TGG + Chr1:27445333-27445352 None:intergenic 30.0%
!! TCTTATTTATGCCTGAGTTT+TGG + Chr1:27443703-27443722 None:intergenic 30.0%
!! TTATAGTTGAAGCTTTAGGA+TGG + Chr1:27446605-27446624 None:intergenic 30.0%
!! TTCAAGAGCACTTGAAATTA+TGG - Chr1:27440034-27440053 MsG0180001809.01.T01:intron 30.0%
!! TTGATATTTTTGAGCTTGCT+TGG + Chr1:27439551-27439570 None:intergenic 30.0%
!! TTTGGAAGACAACTTGTTAA+TGG + Chr1:27447575-27447594 None:intergenic 30.0%
!! TTTTGCAGTAGTTCAAGTTT+GGG + Chr1:27442118-27442137 None:intergenic 30.0%
!! TTTTTGCAGTAGTTCAAGTT+TGG + Chr1:27442119-27442138 None:intergenic 30.0%
!!! AGCTCTTGCTTTTTTTGATT+GGG + Chr1:27445861-27445880 None:intergenic 30.0%
!!! CCCTTCATTACTGATTTTAA+TGG - Chr1:27443909-27443928 MsG0180001809.01.T01:intron 30.0%
!!! TTTAAAGATTTTTGGCTCCT+TGG + Chr1:27445930-27445949 None:intergenic 30.0%
AAAGCCTAGCATATAGGATA+TGG + Chr1:27447098-27447117 None:intergenic 35.0%
AACCCTTGATAAAACAAAGC+TGG - Chr1:27445451-27445470 MsG0180001809.01.T01:intron 35.0%
AACTGAAGTTGAAGCTATCA+AGG + Chr1:27443826-27443845 None:intergenic 35.0%
ACAATGAAAGCCTAGCATAT+AGG + Chr1:27447104-27447123 None:intergenic 35.0%
ACAGAAGCTACCTAAATATC+AGG - Chr1:27446497-27446516 MsG0180001809.01.T01:intron 35.0%
ACCCTTGATAAAACAAAGCT+GGG - Chr1:27445452-27445471 MsG0180001809.01.T01:intron 35.0%
ACTGAAGTTGAAGCTATCAA+GGG + Chr1:27443825-27443844 None:intergenic 35.0%
AGATACACTACAGTACTTTG+AGG + Chr1:27439743-27439762 None:intergenic 35.0%
AGGAAACAACGCAATAGTTA+TGG + Chr1:27444084-27444103 None:intergenic 35.0%
AGGATGAATTGAAGCAATTG+CGG + Chr1:27446278-27446297 None:intergenic 35.0%
AGTGCAAGAAAATACTCTCA+CGG + Chr1:27446301-27446320 None:intergenic 35.0%
ATAAAGCGATGTTAGCAAGT+TGG + Chr1:27440778-27440797 None:intergenic 35.0%
ATAATTTCCCTTTGTCACAC+AGG - Chr1:27437512-27437531 MsG0180001809.01.T01:intron 35.0%
ATAGGTCAATACCAGCAAAA+AGG - Chr1:27446098-27446117 MsG0180001809.01.T01:intron 35.0%
ATATGACAAGACTGCTAGTA+TGG + Chr1:27441730-27441749 None:intergenic 35.0%
ATCACATGAACATAACTCGT+AGG - Chr1:27443617-27443636 MsG0180001809.01.T01:intron 35.0%
ATCGCTTTATCTACATCGTA+AGG - Chr1:27440788-27440807 MsG0180001809.01.T01:intron 35.0%
ATGAAGGGAGTAAATGATGT+CGG + Chr1:27443897-27443916 None:intergenic 35.0%
ATGGTTCATGCAAATATTCG+AGG + Chr1:27444432-27444451 None:intergenic 35.0%
ATGTGTATATCTATGCAGGT+TGG - Chr1:27441181-27441200 MsG0180001809.01.T01:intron 35.0%
ATTGTTAGACGATGACAGTT+TGG - Chr1:27448372-27448391 MsG0180001809.01.T01:intron 35.0%
CAAGGGGAAAGATTGTTTAT+GGG + Chr1:27445667-27445686 None:intergenic 35.0%
CACCATTAGTATCACCATTA+GGG - Chr1:27446649-27446668 MsG0180001809.01.T01:intron 35.0%
CACTTTCCAAGATCTTTGAA+AGG + Chr1:27444547-27444566 None:intergenic 35.0%
CATAATTCGTTCAAATCGGA+TGG + Chr1:27444952-27444971 None:intergenic 35.0%
CATGTTCAAAAGTCATGCTA+CGG + Chr1:27439321-27439340 None:intergenic 35.0%
CCTGTAATATAGGTCATTTC+CGG + Chr1:27439105-27439124 None:intergenic 35.0%
CGAACTTTATTGGGTTCATA+TGG + Chr1:27444882-27444901 None:intergenic 35.0%
CGGAAATGACCTATATTACA+GGG - Chr1:27439103-27439122 MsG0180001809.01.T01:intron 35.0%
CGGAAATGGCATATATTACA+GGG + Chr1:27437735-27437754 None:intergenic 35.0%
CTTATATACTCTAGTTGGAC+TGG - Chr1:27444741-27444760 MsG0180001809.01.T01:intron 35.0%
CTTATATGTCACAACATCAC+AGG - Chr1:27441369-27441388 MsG0180001809.01.T01:intron 35.0%
CTTTCAAAGATCTTGGAAAG+TGG - Chr1:27444545-27444564 MsG0180001809.01.T01:intron 35.0%
GAAGCAGCTGCTAATTTATT+CGG + Chr1:27442978-27442997 None:intergenic 35.0%
GAAGTTCCTTTACTTAGTGT+TGG + Chr1:27444994-27445013 None:intergenic 35.0%
GAATTAACTCGCTTGAAAGA+AGG + Chr1:27448129-27448148 None:intergenic 35.0%
GACACTAAAGATGGAATCTA+CGG + Chr1:27444108-27444127 None:intergenic 35.0%
GACTGGACTTCAATTCTATA+TGG - Chr1:27444758-27444777 MsG0180001809.01.T01:intron 35.0%
GGAAATGACCTATATTACAG+GGG - Chr1:27439104-27439123 MsG0180001809.01.T01:intron 35.0%
GGAAATGGCATATATTACAG+GGG + Chr1:27437734-27437753 None:intergenic 35.0%
GGCATCAACAAAATGGTTTA+TGG - Chr1:27447036-27447055 MsG0180001809.01.T01:intron 35.0%
GGTAACAAAAGTGGATGAAA+GGG - Chr1:27442251-27442270 MsG0180001809.01.T01:intron 35.0%
GTCCTGTTTCACTGAAAATT+TGG + Chr1:27444013-27444032 None:intergenic 35.0%
GTGAGTTATAAGCTAGTGAT+CGG + Chr1:27446545-27446564 None:intergenic 35.0%
GTTCTTTGTATGTATCAACC+AGG - Chr1:27447839-27447858 MsG0180001809.01.T01:intron 35.0%
GTTTGTCCAACACTAAGTAA+AGG - Chr1:27444985-27445004 MsG0180001809.01.T01:intron 35.0%
TAAAGCGATGTTAGCAAGTT+GGG + Chr1:27440777-27440796 None:intergenic 35.0%
TAACTTGGAGACACTAAAGA+TGG + Chr1:27444117-27444136 None:intergenic 35.0%
TACCAATATCTGCTAATGGA+AGG - Chr1:27439197-27439216 MsG0180001809.01.T01:intron 35.0%
TACCTAAATATCAGGACTGT+GGG - Chr1:27446505-27446524 MsG0180001809.01.T01:intron 35.0%
TAGATATCCTGTGTGACAAA+GGG + Chr1:27437522-27437541 None:intergenic 35.0%
TATGATTTCAACCTCCTCTA+AGG - Chr1:27438321-27438340 MsG0180001809.01.T01:intron 35.0%
TATTCGAACTGCCAATAGAA+AGG + Chr1:27446628-27446647 None:intergenic 35.0%
TATTGTGAGATCATGTCACA+AGG + Chr1:27445593-27445612 None:intergenic 35.0%
TCAACACCCCAAATACATAA+AGG - Chr1:27445102-27445121 MsG0180001809.01.T01:intron 35.0%
TCAAGGGGAAAGATTGTTTA+TGG + Chr1:27445668-27445687 None:intergenic 35.0%
TCACCATTAGTATCACCATT+AGG - Chr1:27446648-27446667 MsG0180001809.01.T01:intron 35.0%
TCCTCACGATGTAGATAAAT+CGG + Chr1:27447941-27447960 None:intergenic 35.0%
TCGCTTTATCTACATCGTAA+GGG - Chr1:27440789-27440808 MsG0180001809.01.T01:intron 35.0%
TGAGTTATAAGCTAGTGATC+GGG + Chr1:27446544-27446563 None:intergenic 35.0%
TGATATTTAGGTAGCTTCTG+TGG + Chr1:27446498-27446517 None:intergenic 35.0%
TGGAATGTGTATATCTATGC+AGG - Chr1:27441177-27441196 MsG0180001809.01.T01:intron 35.0%
TGGTAACAAAAGTGGATGAA+AGG - Chr1:27442250-27442269 MsG0180001809.01.T01:intron 35.0%
TTAGATATCCTGTGTGACAA+AGG + Chr1:27437523-27437542 None:intergenic 35.0%
TTCATTATCCATGTGCAAGA+AGG + Chr1:27442396-27442415 None:intergenic 35.0%
TTGACATTTGTGAGCATGTT+TGG - Chr1:27439927-27439946 MsG0180001809.01.T01:intron 35.0%
TTGGATAAAGAATGCTGAAG+AGG - Chr1:27446949-27446968 MsG0180001809.01.T01:intron 35.0%
TTGTCACACAGGATATCTAA+AGG - Chr1:27437523-27437542 MsG0180001809.01.T01:intron 35.0%
TTTATGGGAGTAGACTATTG+AGG + Chr1:27445652-27445671 None:intergenic 35.0%
! AAAGGTAAGTGTACCCATTT+TGG - Chr1:27443466-27443485 MsG0180001809.01.T01:intron 35.0%
! AAGGTAAGTGTACCCATTTT+GGG - Chr1:27443467-27443486 MsG0180001809.01.T01:intron 35.0%
! AATTTTACAAGGGCGAAAAC+CGG - Chr1:27439083-27439102 MsG0180001809.01.T01:intron 35.0%
! AATTTTACAAGGGCGAAAAC+CGG + Chr1:27439102-27439083 None:intergenic 35.0%
! AGTAGAATTCTCTTTTCCCA+TGG + Chr1:27437192-27437211 None:intergenic 35.0%
! CACCAAATTTTCAGTGAAAC+AGG - Chr1:27444008-27444027 MsG0180001809.01.T01:intron 35.0%
! CACCTTCCATTATCAGATTT+TGG + Chr1:27448313-27448332 None:intergenic 35.0%
! CCTGTAATATATGCCATTTC+CGG - Chr1:27437733-27437752 MsG0180001809.01.T01:intron 35.0%
! CTCGTTTAAGATCAATGATG+AGG + Chr1:27444402-27444421 None:intergenic 35.0%
! CTTGCTAATCTTGTTGTCAT+TGG - Chr1:27440488-27440507 MsG0180001809.01.T01:intron 35.0%
! GGAAAGTGGGTTTATATGAA+GGG - Chr1:27444559-27444578 MsG0180001809.01.T01:intron 35.0%
! GGGCAGAAACAAATTTTGTT+GGG - Chr1:27444822-27444841 MsG0180001809.01.T01:intron 35.0%
! GGTTGACTTAAACACTGTAT+TGG + Chr1:27446712-27446731 None:intergenic 35.0%
! GTGCTGAATTCTAGGAAAAA+TGG - Chr1:27438346-27438365 MsG0180001809.01.T01:intron 35.0%
! GTTTTTCACCCCTGTAATAT+AGG + Chr1:27437742-27437723 None:intergenic 35.0%
! TAGCAAACAAAAGCGTAAGA+GGG - Chr1:27444467-27444486 MsG0180001809.01.T01:intron 35.0%
! TAGTGTTATCACCTTTTTGC+TGG + Chr1:27446112-27446131 None:intergenic 35.0%
! TCTAGATGTGAAGTGTTCAA+GGG + Chr1:27445684-27445703 None:intergenic 35.0%
! TGGAAAGTGGGTTTATATGA+AGG - Chr1:27444558-27444577 MsG0180001809.01.T01:intron 35.0%
! TGTGAACAATTTGAAGCTAG+TGG - Chr1:27445241-27445260 MsG0180001809.01.T01:intron 35.0%
! TTAGCAAACAAAAGCGTAAG+AGG - Chr1:27444466-27444485 MsG0180001809.01.T01:intron 35.0%
! TTAGCAAGTTGGGTTTGTAA+GGG + Chr1:27440767-27440786 None:intergenic 35.0%
! TTGTTGTTCATGAGCATGTT+TGG + Chr1:27447593-27447612 None:intergenic 35.0%
! TTTCCCTTTTTCCTTCAAGT+TGG + Chr1:27443003-27443022 None:intergenic 35.0%
! TTTGCAGTAGTTCAAGTTTG+GGG + Chr1:27442117-27442136 None:intergenic 35.0%
!! ATTGCTAGTCTTGTAGTCAT+AGG - Chr1:27447640-27447659 MsG0180001809.01.T01:intron 35.0%
!! GTCAATTTTGTTTCAAGGGA+AGG - Chr1:27444595-27444614 MsG0180001809.01.T01:intron 35.0%
!! TATGTTCTTTGGCTCTAACT+TGG + Chr1:27444132-27444151 None:intergenic 35.0%
!! TCTAAAAGTTGGTACCATGA+TGG + Chr1:27446361-27446380 None:intergenic 35.0%
!! TTCAAGAGCACTTAAGATTG+TGG - Chr1:27441990-27442009 MsG0180001809.01.T01:intron 35.0%
!! TTCCCTTTTTCCTTCAAGTT+GGG + Chr1:27443002-27443021 None:intergenic 35.0%
!!! AACCCAGCTTTGTTTTATCA+AGG + Chr1:27445457-27445476 None:intergenic 35.0%
!!! ACCCAGCTTTGTTTTATCAA+GGG + Chr1:27445456-27445475 None:intergenic 35.0%
!!! CGGATGTTTTGAAAATATGC+AGG - Chr1:27446018-27446037 MsG0180001809.01.T01:intron 35.0%
!!! GAGCTCTTGCTTTTTTTGAT+TGG + Chr1:27445862-27445881 None:intergenic 35.0%
!!! GCTCTTGCTTTTTTTGATTG+GGG + Chr1:27445860-27445879 None:intergenic 35.0%
!!! GTGGAATTTTTTTTGACACG+TGG + Chr1:27437905-27437924 None:intergenic 35.0%
!!! TTTTTCAAGGTTGCTAAGGA+AGG - Chr1:27447069-27447088 MsG0180001809.01.T01:intron 35.0%
AAATGATGTCGGAGCTATGA+AGG + Chr1:27443886-27443905 None:intergenic 40.0%
AAGAGGGAAGCTCGAAAATT+CGG - Chr1:27444483-27444502 MsG0180001809.01.T01:intron 40.0%
AAGCATCAACAAACAAGGTG+AGG + Chr1:27447411-27447430 None:intergenic 40.0%
AAGCATGAATATCTCCACCA+AGG + Chr1:27447668-27447687 None:intergenic 40.0%
AATGATGTCGGAGCTATGAA+GGG + Chr1:27443885-27443904 None:intergenic 40.0%
ACCAGTACTCAAGATAAGTC+GGG - Chr1:27447015-27447034 MsG0180001809.01.T01:intron 40.0%
ACCTAAATATCAGGACTGTG+GGG - Chr1:27446506-27446525 MsG0180001809.01.T01:intron 40.0%
ACTGTTTGTCACAAAATCGC+AGG - Chr1:27447447-27447466 MsG0180001809.01.T01:intron 40.0%
AGAATTCAGCACTTCCTTAG+AGG + Chr1:27438338-27438357 None:intergenic 40.0%
AGAGAGAATTACAAGGCTGT+AGG - Chr1:27446140-27446159 MsG0180001809.01.T01:intron 40.0%
AGATCATGTCACAAGGATGA+AGG + Chr1:27445586-27445605 None:intergenic 40.0%
AGCATCAACAAACAAGGTGA+GGG + Chr1:27447410-27447429 None:intergenic 40.0%
AGGAGTAAAAAGTGGGTACA+TGG + Chr1:27445325-27445344 None:intergenic 40.0%
AGTTATAAGCTAGTGATCGG+GGG + Chr1:27446542-27446561 None:intergenic 40.0%
ATCGGGAATAGATAACACCT+TGG - Chr1:27446825-27446844 MsG0180001809.01.T01:intron 40.0%
ATGGATGGGCGAACTTTATT+GGG + Chr1:27444891-27444910 None:intergenic 40.0%
ATTTAGGTAGCTTCTGTGGT+CGG + Chr1:27446494-27446513 None:intergenic 40.0%
CAACTCAATGGCATGATACA+TGG - Chr1:27445833-27445852 MsG0180001809.01.T01:intron 40.0%
CACCTTCCATTAGCAGATAT+TGG + Chr1:27439202-27439221 None:intergenic 40.0%
CATGACAACAATGTTAGCGA+AGG + Chr1:27445740-27445759 None:intergenic 40.0%
CATGTCCAAAAGTCGTGTTA+CGG + Chr1:27441285-27441304 None:intergenic 40.0%
CCGGAAATGACCTATATTAC+AGG - Chr1:27439102-27439121 MsG0180001809.01.T01:intron 40.0%
CCGGAAATGGCATATATTAC+AGG + Chr1:27437736-27437755 None:intergenic 40.0%
CCGGCATAATTCGTTCAAAT+CGG + Chr1:27444956-27444975 None:intergenic 40.0%
CGAATTCATTGGTACGTCAT+TGG - Chr1:27442512-27442531 MsG0180001809.01.T01:intron 40.0%
CGAGAAATATTCCCAAGTTG+AGG + Chr1:27446685-27446704 None:intergenic 40.0%
CTAAAGATGGAATCTACGGA+AGG + Chr1:27444104-27444123 None:intergenic 40.0%
CTACCTAAATATCAGGACTG+TGG - Chr1:27446504-27446523 MsG0180001809.01.T01:intron 40.0%
CTCCCAACTTGAAGGAAAAA+GGG - Chr1:27442997-27443016 MsG0180001809.01.T01:intron 40.0%
CTTATCATGGTTGTCACCAT+AGG + Chr1:27440584-27440603 None:intergenic 40.0%
GAAAGATGAAGGTTAGGGTT+TGG - Chr1:27444629-27444648 MsG0180001809.01.T01:intron 40.0%
GAATAGATAACACCTTGGCA+TGG - Chr1:27446830-27446849 MsG0180001809.01.T01:intron 40.0%
GACAACATCAACACCATATG+AGG - Chr1:27445962-27445981 MsG0180001809.01.T01:intron 40.0%
GACCAGTACTCAAGATAAGT+CGG - Chr1:27447014-27447033 MsG0180001809.01.T01:intron 40.0%
GAGGACTATAAGAGAAAGAG+TGG + Chr1:27445633-27445652 None:intergenic 40.0%
GAGTTATAAGCTAGTGATCG+GGG + Chr1:27446543-27446562 None:intergenic 40.0%
GATCATGTCACAAGGATGAA+GGG + Chr1:27445585-27445604 None:intergenic 40.0%
GTCTGAACGTTGTCATCAAT+CGG - Chr1:27446807-27446826 MsG0180001809.01.T01:intron 40.0%
GTCTTAAAGGCAAGTACTTG+AGG - Chr1:27446859-27446878 MsG0180001809.01.T01:intron 40.0%
GTTGCAATTGCTCATGTTTG+AGG + Chr1:27440165-27440184 None:intergenic 40.0%
TAAGTCGGGCATCAACAAAA+TGG - Chr1:27447029-27447048 MsG0180001809.01.T01:intron 40.0%
TATAAGCTTCGACGAGGTAA+TGG - Chr1:27442063-27442082 MsG0180001809.01.T01:intron 40.0%
TATGGATGGGCGAACTTTAT+TGG + Chr1:27444892-27444911 None:intergenic 40.0%
TATGTCACAACATCACAGGT+TGG - Chr1:27441373-27441392 MsG0180001809.01.T01:intron 40.0%
TCCATGTTGCGCAAACATAA+TGG + Chr1:27437596-27437615 None:intergenic 40.0%
TCCATGTTGCGTAAGCATAA+TGG + Chr1:27448151-27448170 None:intergenic 40.0%
TCCATTATGCTTACGCAACA+TGG - Chr1:27448147-27448166 MsG0180001809.01.T01:intron 40.0%
TCCATTATGCTTGTGCAACA+AGG + Chr1:27440386-27440405 None:intergenic 40.0%
TCCATTATGTTTGCGCAACA+TGG - Chr1:27437592-27437611 MsG0180001809.01.T01:intron 40.0%
TCCTTGTTGCACAAGCATAA+TGG - Chr1:27440382-27440401 MsG0180001809.01.T01:intron 40.0%
TCTAATCAGTAGCAACTGAG+CGG - Chr1:27444675-27444694 MsG0180001809.01.T01:intron 40.0%
TCTCCCAACTTGAAGGAAAA+AGG - Chr1:27442996-27443015 MsG0180001809.01.T01:intron 40.0%
TCTGAACGTTGTCATCAATC+GGG - Chr1:27446808-27446827 MsG0180001809.01.T01:intron 40.0%
TCTGATTTCCTTCTTGCACA+TGG - Chr1:27442385-27442404 MsG0180001809.01.T01:intron 40.0%
TGAATTGAAGCAATTGCGGA+AGG + Chr1:27446274-27446293 None:intergenic 40.0%
TGATATTGAAATCCTTGCCG+AGG + Chr1:27446210-27446229 None:intergenic 40.0%
TGATGACAACGTTCAGACTA+GGG + Chr1:27446805-27446824 None:intergenic 40.0%
TGCTTACGCAACATGGAAAT+CGG - Chr1:27448154-27448173 MsG0180001809.01.T01:intron 40.0%
TGGAATTATAAGCTTCGACG+AGG - Chr1:27442057-27442076 MsG0180001809.01.T01:intron 40.0%
TGGTTTCATATGGCAACTAC+AGG + Chr1:27444848-27444867 None:intergenic 40.0%
TGTGACAAACAGTCGTATCA+TGG + Chr1:27447440-27447459 None:intergenic 40.0%
TTTGTCAAAACATCGCAGGT+TGG + Chr1:27442026-27442045 None:intergenic 40.0%
TTTGTCACAAAATCGCAGGT+TGG - Chr1:27447451-27447470 MsG0180001809.01.T01:intron 40.0%
TTTGTCACAACATCGCAGAT+TGG - Chr1:27439409-27439428 MsG0180001809.01.T01:intron 40.0%
TTTGTTACAACATCGCAGGT+TGG - Chr1:27448518-27448537 MsG0180001809.01.T01:intron 40.0%
! ACCGATTTATCTACATCGTG+AGG - Chr1:27447937-27447956 MsG0180001809.01.T01:intron 40.0%
! AGAGGGTTTTACAAAAGTCG+TGG + Chr1:27438377-27438396 None:intergenic 40.0%
! CCGATTTGAACGAATTATGC+CGG - Chr1:27444953-27444972 MsG0180001809.01.T01:intron 40.0%
! CCTTTTGGCAATCAAAAGAG+TGG - Chr1:27442952-27442971 MsG0180001809.01.T01:intron 40.0%
! CGGGCAGAAACAAATTTTGT+TGG - Chr1:27444821-27444840 MsG0180001809.01.T01:intron 40.0%
! CGTATATGTCCCTGGTATTT+TGG + Chr1:27446328-27446347 None:intergenic 40.0%
! CTAGATGTGAAGTGTTCAAG+GGG + Chr1:27445683-27445702 None:intergenic 40.0%
! GGGTTCATATGGTTTGTAGT+GGG + Chr1:27444871-27444890 None:intergenic 40.0%
! GTCTAGATGTGAAGTGTTCA+AGG + Chr1:27445685-27445704 None:intergenic 40.0%
! GTGCAGCACATTCTAAAAGT+TGG + Chr1:27446372-27446391 None:intergenic 40.0%
! GTTAGCAAGTTGGGTTTGTA+AGG + Chr1:27440768-27440787 None:intergenic 40.0%
! GTTTCCCATCTTGTTTGCAA+AGG - Chr1:27446881-27446900 MsG0180001809.01.T01:intron 40.0%
! TACGTTTGTTACAACATCGC+AGG - Chr1:27448514-27448533 MsG0180001809.01.T01:intron 40.0%
! TCATGTTTGAGGCATGATGT+TGG + Chr1:27440154-27440173 None:intergenic 40.0%
! TGGAAGGTGTATATCTATGC+AGG - Chr1:27439213-27439232 MsG0180001809.01.T01:intron 40.0%
! TGGAAGGTGTATATCTATGC+TGG - Chr1:27439213-27439232 MsG0180001809.01.T01:intron 40.0%
! TGGGTTCATATGGTTTGTAG+TGG + Chr1:27444872-27444891 None:intergenic 40.0%
! TGTATCATGCCATTGAGTTG+AGG + Chr1:27445833-27445852 None:intergenic 40.0%
! TTCATATGGTTTGTAGTGGG+TGG + Chr1:27444868-27444887 None:intergenic 40.0%
! TTCATTCGTAGCACGACTTT+TGG - Chr1:27448423-27448442 MsG0180001809.01.T01:intron 40.0%
! TTGATGACAACGTTCAGACT+AGG + Chr1:27446806-27446825 None:intergenic 40.0%
!! AAAGTGTTGTTAGACGGTGA+TGG + Chr1:27442176-27442195 None:intergenic 40.0%
!! AAGAGTGGTTGATGAAAGAG+AGG + Chr1:27445618-27445637 None:intergenic 40.0%
!! AGTCATTGGTGTCGTGATTA+AGG - Chr1:27437099-27437118 MsG0180001809.01.T01:CDS 40.0%
!! AGTTGAAGCTTTAGGATGGA+AGG + Chr1:27446601-27446620 None:intergenic 40.0%
!! ATATGTCCCTGGTATTTTGG+AGG + Chr1:27446325-27446344 None:intergenic 40.0%
!! CCACTCTTTTGATTGCCAAA+AGG + Chr1:27442955-27442974 None:intergenic 40.0%
!! CTAAGGAAGTGCTGAATTCT+AGG - Chr1:27438338-27438357 MsG0180001809.01.T01:intron 40.0%
!! CTTGCTAGTCTTGTAGTCAT+TGG - Chr1:27437085-27437104 MsG0180001809.01.T01:CDS 40.0%
!! GAGTACTGGTCGAACTAAAT+AGG + Chr1:27447005-27447024 None:intergenic 40.0%
!! GTTGAAGCTTTAGGATGGAA+GGG + Chr1:27446600-27446619 None:intergenic 40.0%
!! TTGAAGCTTTAGGATGGAAG+GGG + Chr1:27446599-27446618 None:intergenic 40.0%
!! TTGTAGTGGGTGGTTTCATA+TGG + Chr1:27444858-27444877 None:intergenic 40.0%
AAAGTCGAGCCTCAACTCAA+TGG - Chr1:27445821-27445840 MsG0180001809.01.T01:intron 45.0%
AAGTCGTATGGTGACATCCA+TGG - Chr1:27437172-27437191 MsG0180001809.01.T01:CDS 45.0%
AATTACAAGGCTGTAGGCTG+AGG - Chr1:27446146-27446165 MsG0180001809.01.T01:intron 45.0%
ACTCAGCAGATTCGCTTATG+TGG + Chr1:27439002-27439021 None:intergenic 45.0%
AGCTTCAACAAACGAGGTGA+AGG + Chr1:27439368-27439387 None:intergenic 45.0%
AGGTTCTTCTTCCTCGACAA+AGG - Chr1:27446166-27446185 MsG0180001809.01.T01:intron 45.0%
AGTCGTATGGTGACATCCAT+GGG - Chr1:27437173-27437192 MsG0180001809.01.T01:CDS 45.0%
AGTTGAGCAACTCGTGACTT+TGG + Chr1:27446778-27446797 None:intergenic 45.0%
ATTCAGCACTTCCTTAGAGG+AGG + Chr1:27438335-27438354 None:intergenic 45.0%
CACGTTTGTCAAAACATCGC+AGG + Chr1:27442030-27442049 None:intergenic 45.0%
CATAAGCGAATCTGCTGAGT+TGG - Chr1:27439002-27439021 MsG0180001809.01.T01:intron 45.0%
CGTAAGCTAATCTGCTGAGT+TGG + Chr1:27437836-27437855 None:intergenic 45.0%
CGTATATTTACCTCCAGCTC+TGG - Chr1:27443794-27443813 MsG0180001809.01.T01:intron 45.0%
CTCAGCAGATTCGCTTATGT+GGG + Chr1:27439001-27439020 None:intergenic 45.0%
CTGGTCGAACTAAATAGGAG+AGG + Chr1:27447000-27447019 None:intergenic 45.0%
GAGGAAATCCATCTTTCGTG+AGG + Chr1:27446981-27447000 None:intergenic 45.0%
GAGGGTTGCTTCTTAAGTCT+TGG + Chr1:27447392-27447411 None:intergenic 45.0%
GCAAGAAAATACTCTCACGG+AGG + Chr1:27446298-27446317 None:intergenic 45.0%
GCGTCCATATCCTATATGCT+AGG - Chr1:27447091-27447110 MsG0180001809.01.T01:intron 45.0%
GGCCCTAATGGTGATACTAA+TGG + Chr1:27446654-27446673 None:intergenic 45.0%
TCAGCAGATTCGCTTATGTG+GGG + Chr1:27439000-27439019 None:intergenic 45.0%
TCCCCACAGTCCTGATATTT+AGG + Chr1:27446510-27446529 None:intergenic 45.0%
TCTTGTAGTCATAGGTGCCT+TGG - Chr1:27447648-27447667 MsG0180001809.01.T01:intron 45.0%
TGGGCACAATAAGCATCAAG+TGG + Chr1:27446576-27446595 None:intergenic 45.0%
TGTGGAGGAAAGTCGTGAAT+TGG + Chr1:27446415-27446434 None:intergenic 45.0%
TGTGGGTAGGAGATATGGAT+GGG + Chr1:27444905-27444924 None:intergenic 45.0%
TTGGTACCATGATGGCTGAT+GGG + Chr1:27446353-27446372 None:intergenic 45.0%
TTGTGGGTAGGAGATATGGA+TGG + Chr1:27444906-27444925 None:intergenic 45.0%
! AAGCTAATCTGCTGAGTTGG+AGG + Chr1:27437833-27437852 None:intergenic 45.0%
! ACAAAGCTGGGTTGAAAGAG+TGG - Chr1:27445464-27445483 MsG0180001809.01.T01:intron 45.0%
! ACTCGTGACTTTGGTTTCTC+TGG + Chr1:27446769-27446788 None:intergenic 45.0%
! AGCTAATCTGCTGAGTTGGA+GGG + Chr1:27437832-27437851 None:intergenic 45.0%
! ATGAAGGGTGTGATTGGAGT+TGG + Chr1:27443870-27443889 None:intergenic 45.0%
! TCTTGTTGTCATTGGTGCCT+TGG - Chr1:27440496-27440515 MsG0180001809.01.T01:intron 45.0%
! TTCAGCCGTAACACGACTTT+TGG - Chr1:27441277-27441296 MsG0180001809.01.T01:intron 45.0%
!! ACTCAGCAGATTAGCTTACG+TGG - Chr1:27437836-27437855 MsG0180001809.01.T01:intron 45.0%
!! GGTTTTGTGGGTAGGAGATA+TGG + Chr1:27444910-27444929 None:intergenic 45.0%
!!! AAATGAATTTAAAATTTTTT+TGG - Chr1:27438873-27438892 MsG0180001809.01.T01:intron 5.0%
!!! CATTTTTTATTTTTTTTAAA+TGG - Chr1:27437879-27437898 MsG0180001809.01.T01:intron 5.0%
ACAAGGGCGAAAACCGGAAA+TGG + Chr1:27439108-27439089 None:intergenic 50.0%
AGCCCGGACATAAAGGAATG+GGG - Chr1:27446438-27446457 MsG0180001809.01.T01:intron 50.0%
AGCTGCTTCTCCCAACTTGA+AGG - Chr1:27442989-27443008 MsG0180001809.01.T01:intron 50.0%
ATCAAGGGAGTAACCAGAGC+TGG + Chr1:27443810-27443829 None:intergenic 50.0%
CTGAGACTCTTCAACGACCA+AGG - Chr1:27445910-27445929 MsG0180001809.01.T01:intron 50.0%
GAGCCCGGACATAAAGGAAT+GGG - Chr1:27446437-27446456 MsG0180001809.01.T01:intron 50.0%
GCACTGCCTCCAAAATACCA+GGG - Chr1:27446316-27446335 MsG0180001809.01.T01:intron 50.0%
GCCATGCAACTCCTCAACTT+GGG - Chr1:27446671-27446690 MsG0180001809.01.T01:intron 50.0%
GCCCGACTTATCTTGAGTAC+TGG + Chr1:27447019-27447038 None:intergenic 50.0%
GGAGTCATCCTCACGAAAGA+TGG - Chr1:27446970-27446989 MsG0180001809.01.T01:intron 50.0%
GGCATGGCAGTACGTCTTAA+AGG - Chr1:27446846-27446865 MsG0180001809.01.T01:intron 50.0%
GTTGGTACCATGATGGCTGA+TGG + Chr1:27446354-27446373 None:intergenic 50.0%
TAAGACGTACTGCCATGCCA+AGG + Chr1:27446845-27446864 None:intergenic 50.0%
TGCACTGCCTCCAAAATACC+AGG - Chr1:27446315-27446334 MsG0180001809.01.T01:intron 50.0%
TGCCCCCATTCCTTTATGTC+CGG + Chr1:27446444-27446463 None:intergenic 50.0%
TGGAGCTGCAACTATGGATG+TGG + Chr1:27443850-27443869 None:intergenic 50.0%
TGGAGTTGGAGCTGCAACTA+TGG + Chr1:27443856-27443875 None:intergenic 50.0%
TGGTACCATGATGGCTGATG+GGG + Chr1:27446352-27446371 None:intergenic 50.0%
TGTAGTCATAGGTGCCTTGG+TGG - Chr1:27447651-27447670 MsG0180001809.01.T01:intron 50.0%
! AAGCGAATCTGCTGAGTTGG+AGG - Chr1:27439005-27439024 MsG0180001809.01.T01:intron 50.0%
! AGCGAATCTGCTGAGTTGGA+GGG - Chr1:27439006-27439025 MsG0180001809.01.T01:intron 50.0%
! CTAATCTGCTGAGTTGGAGG+GGG + Chr1:27437830-27437849 None:intergenic 50.0%
! GCTAATCTGCTGAGTTGGAG+GGG + Chr1:27437831-27437850 None:intergenic 50.0%
! GGAGCTATGAAGGGTGTGAT+TGG + Chr1:27443876-27443895 None:intergenic 50.0%
! TAATCTGCTGAGTTGGAGGG+GGG + Chr1:27437829-27437848 None:intergenic 50.0%
! TCAAGTTTGGGGCATGATGC+TGG + Chr1:27442106-27442125 None:intergenic 50.0%
! TCCCAAGTTGAGGAGTTGCA+TGG + Chr1:27446675-27446694 None:intergenic 50.0%
!! AAGCTTTAGGATGGAAGGGG+TGG + Chr1:27446596-27446615 None:intergenic 50.0%
!! AGCTTTAGGATGGAAGGGGT+GGG + Chr1:27446595-27446614 None:intergenic 50.0%
!! TAGCTTACGTGGCACTGACT+GGG - Chr1:27437847-27437866 MsG0180001809.01.T01:intron 50.0%
!! TTAGCTTACGTGGCACTGAC+TGG - Chr1:27437846-27437865 MsG0180001809.01.T01:intron 50.0%
AAGGGAGTAACCAGAGCTGG+AGG + Chr1:27443807-27443826 None:intergenic 55.0%
ATCCTTGCCGAGGAAGACTC+TGG + Chr1:27446200-27446219 None:intergenic 55.0%
CGAGCCCGGACATAAAGGAA+TGG - Chr1:27446436-27446455 MsG0180001809.01.T01:intron 55.0%
CGGATGGGATGAAGCGATGT+GGG + Chr1:27444936-27444955 None:intergenic 55.0%
GAGGAGTTGCATGGCCCTAA+TGG + Chr1:27446666-27446685 None:intergenic 55.0%
GATGGGGACGTATATGTCCC+TGG + Chr1:27446336-27446355 None:intergenic 55.0%
GCCCCCATTCCTTTATGTCC+GGG + Chr1:27446443-27446462 None:intergenic 55.0%
GCCCGGACATAAAGGAATGG+GGG - Chr1:27446439-27446458 MsG0180001809.01.T01:intron 55.0%
GGCCATGCAACTCCTCAACT+TGG - Chr1:27446670-27446689 MsG0180001809.01.T01:intron 55.0%
GTCAAGGCCAGAGTCTTCCT+CGG - Chr1:27446190-27446209 MsG0180001809.01.T01:intron 55.0%
TACGTCCCCATCAGCCATCA+TGG - Chr1:27446344-27446363 MsG0180001809.01.T01:intron 55.0%
TCGCTTATGTGGGGCTGAGT+TGG + Chr1:27438991-27439010 None:intergenic 55.0%
TCGGATGGGATGAAGCGATG+TGG + Chr1:27444937-27444956 None:intergenic 55.0%
TGGGATGAAGCGATGTGGGT+CGG + Chr1:27444932-27444951 None:intergenic 55.0%
! CGAATCTGCTGAGTTGGAGG+GGG - Chr1:27439008-27439027 MsG0180001809.01.T01:intron 55.0%
! GAATCTGCTGAGTTGGAGGG+GGG - Chr1:27439009-27439028 MsG0180001809.01.T01:intron 55.0%
! GCGAATCTGCTGAGTTGGAG+GGG - Chr1:27439007-27439026 MsG0180001809.01.T01:intron 55.0%
!! CGATGTGGGTCGGGTTTTGT+GGG + Chr1:27444922-27444941 None:intergenic 55.0%
!! CTTCCTCGACAAAGGCGTCA+AGG - Chr1:27446174-27446193 MsG0180001809.01.T01:intron 55.0%
ACTTTCCTCCACAGCGAGCC+CGG - Chr1:27446422-27446441 MsG0180001809.01.T01:intron 60.0%
CACAGCGAGCCCGGACATAA+AGG - Chr1:27446431-27446450 MsG0180001809.01.T01:intron 60.0%
CTTTATGTCCGGGCTCGCTG+TGG + Chr1:27446433-27446452 None:intergenic 60.0%
GGAATGGGGGCAAGCGTAAG+AGG - Chr1:27446452-27446471 MsG0180001809.01.T01:intron 60.0%
GGGATGAAGCGATGTGGGTC+GGG + Chr1:27444931-27444950 None:intergenic 60.0%
! GCGATGTGGGTCGGGTTTTG+TGG + Chr1:27444923-27444942 None:intergenic 60.0%
! TGGCCTTGACGCCTTTGTCG+AGG + Chr1:27446180-27446199 None:intergenic 60.0%
!! GTGGGTCGGGTTTTGTGGGT+AGG + Chr1:27444918-27444937 None:intergenic 60.0%
GGCCAGAGTCTTCCTCGGCA+AGG - Chr1:27446195-27446214 MsG0180001809.01.T01:intron 65.0%
TATGTCCGGGCTCGCTGTGG+AGG + Chr1:27446430-27446449 None:intergenic 65.0%
! CTGCTGAGTTGGAGGGGGGA+GGG - Chr1:27439013-27439032 MsG0180001809.01.T01:intron 65.0%
! CTGCTGAGTTGGAGGGGGGA+GGG + Chr1:27439032-27439013 None:intergenic 65.0%
! TCTGCTGAGTTGGAGGGGGG+AGG - Chr1:27439012-27439031 MsG0180001809.01.T01:intron 65.0%
! TCTGCTGAGTTGGAGGGGGG+AGG + Chr1:27439031-27439012 None:intergenic 65.0%
! TGCTGAGTTGGAGGGGGGAG+GGG - Chr1:27439014-27439033 MsG0180001809.01.T01:intron 65.0%
! TGCTGAGTTGGAGGGGGGAG+GGG + Chr1:27439033-27439014 None:intergenic 65.0%
!!! GAGGGGGGAGGGGTGTTTTC+CGG + Chr1:27437814-27437833 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr1 gene 27437070 27448624 27437070 ID=MsG0180001809.01;Name=MsG0180001809.01
Chr1 mRNA 27437070 27448624 27437070 ID=MsG0180001809.01.T01;Parent=MsG0180001809.01;Name=MsG0180001809.01.T01;_AED=0.50;_eAED=0.62;_QI=0|0|0|1|0|0|3|0|141
Chr1 exon 27448574 27448624 27448574 ID=MsG0180001809.01.T01:exon:34796;Parent=MsG0180001809.01.T01
Chr1 exon 27448054 27448149 27448054 ID=MsG0180001809.01.T01:exon:34797;Parent=MsG0180001809.01.T01
Chr1 CDS 27448574 27448624 27448574 ID=MsG0180001809.01.T01:cds;Parent=MsG0180001809.01.T01
Chr1 CDS 27448054 27448149 27448054 ID=MsG0180001809.01.T01:cds;Parent=MsG0180001809.01.T01
Chr1 CDS 27437070 27437348 27437070 ID=MsG0180001809.01.T01:cds;Parent=MsG0180001809.01.T01
Chr1 mRNA 27437070 27448083 27437070 ID=MsG0180001809.01.T02;Parent=MsG0180001809.01;Name=MsG0180001809.01.T02;_AED=0.50;_eAED=0.67;_QI=0|0|0|1|0|0|2|0|102
Chr1 exon 27448054 27448083 27448054 ID=MsG0180001809.01.T02:exon:34799;Parent=MsG0180001809.01.T02
Chr1 CDS 27448054 27448083 27448054 ID=MsG0180001809.01.T02:cds;Parent=MsG0180001809.01.T02
Chr1 CDS 27437070 27437348 27437070 ID=MsG0180001809.01.T02:cds;Parent=MsG0180001809.01.T02
Gene Sequence

>MsG0180001809.01.T02

ATGGAAATCAAAGAAGAATATACAAAAACAGTTGAAGCTTTTATAATTCAAAAAATATTGTTAGACGATGACAGTTTGGCATATGTTTCTGATACAAGAGAGCAATTTTCATTCGTAGCACGACTTTTGGACATGATCTTGACAAGTCTTGAGAATCAACCTTCACCTCGTTTGTTGAAGCTTATAATTCCATTTATTTACGTTTGTTACAACATCGCAGGTTGGTTGAAAAGTTCCATAATCTTAAGTGCTATTGAATATGCATTTTTTATTCTTTCTAAGTTTCAGATAAATTTTATTTCGTATTGA

>MsG0180001809.01.T01

TTTGAGCATTTGAGGCTTGCTAGTCTTGTAGTCATTGGTGTCGTGATTAAGGTTAAAACCAATGAAGTCATAGGTTTTCATCTTTCAAGCGATATAATTCCATTATGTTTGCGCAACATGGAAATCAAAGAAGAATATACAAAAACAGTTGAAGCTTTTATAATTCAAAAAATATTGTTAGACGATGACAGTTTGGCATATGTTTCTGATACAAGAGAGCAATTTTCATTCGTAGCACGACTTTTGGACATGATCTTGACAAGTCTTGAGAATCAACCTTCACCTCGTTTGTTGAAGCTTATAATTCCATTTATTTACGTTTGTTACAACATCGCAGGTTGGTTGAAAAGTTCCATAATCTTAAGTGCTATTGAATATGCATTTTTTATTCTTTCTAAGTTTCAGATAAATTTTATTTCGTATTGA
Protein sequence

>MsG0180001809.01.T02

MEIKEEYTKTVEAFIIQKILLDDDSLAYVSDTREQFSFVARLLDMILTSLENQPSPRLLKLIIPFIYVCYNIAGWLKSSIILSAIEYAFFILSKFQINFISY*

>MsG0180001809.01.T01

FEHLRLASLVVIGVVIKVKTNEVIGFHLSSDIIPLCLRNMEIKEEYTKTVEAFIIQKILLDDDSLAYVSDTREQFSFVARLLDMILTSLENQPSPRLLKLIIPFIYVCYNIAGWLKSSIILSAIEYAFFILSKFQINFISY*