Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180001843.01.T01 | KHG10874.1 | 54.815 | 135 | 57 | 2 | 1 | 134 | 1 | 132 | 1.91E-33 | 126 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180001843.01.T01 | Q6EU39 | 56.667 | 120 | 47 | 2 | 1 | 115 | 1 | 120 | 1.39E-32 | 118 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180001843.01.T01 | A0A0B0NGF9 | 54.815 | 135 | 57 | 2 | 1 | 134 | 1 | 132 | 9.13e-34 | 126 |
| Gene ID | Type | Classification |
|---|---|---|
| MsG0180001843.01.T01 | TF | MADS-M-type |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180001843.01.T01 | MTR_5g046870 | 83.824 | 68 | 9 | 1 | 1 | 66 | 1 | 68 | 1.05e-33 | 114 |
| MsG0180001843.01.T01 | MTR_8g033270 | 98.246 | 57 | 1 | 0 | 1 | 57 | 1 | 57 | 7.50e-33 | 116 |
| MsG0180001843.01.T01 | MTR_7g016600 | 94.737 | 57 | 3 | 0 | 1 | 57 | 1 | 57 | 1.35e-32 | 116 |
| MsG0180001843.01.T01 | MTR_6g015975 | 94.737 | 57 | 3 | 0 | 1 | 57 | 1 | 57 | 6.97e-32 | 114 |
| MsG0180001843.01.T01 | MTR_8g097090 | 94.737 | 57 | 3 | 0 | 1 | 57 | 1 | 57 | 8.52e-32 | 114 |
| MsG0180001843.01.T01 | MTR_3g084980 | 92.982 | 57 | 4 | 0 | 1 | 57 | 1 | 57 | 1.83e-31 | 113 |
| MsG0180001843.01.T01 | MTR_4g109810 | 91.228 | 57 | 5 | 0 | 1 | 57 | 1 | 57 | 1.95e-31 | 112 |
| MsG0180001843.01.T01 | MTR_7g075850 | 94.737 | 57 | 3 | 0 | 1 | 57 | 1 | 57 | 2.08e-31 | 113 |
| MsG0180001843.01.T01 | MTR_2g461710 | 82.456 | 57 | 10 | 0 | 1 | 57 | 1 | 57 | 7.89e-30 | 103 |
| MsG0180001843.01.T01 | MTR_3g005530 | 82.456 | 57 | 10 | 0 | 1 | 57 | 1 | 57 | 6.39e-29 | 105 |
| MsG0180001843.01.T01 | MTR_4g109830 | 84.211 | 57 | 9 | 0 | 1 | 57 | 1 | 57 | 2.27e-28 | 104 |
| MsG0180001843.01.T01 | MTR_2g017865 | 80.702 | 57 | 11 | 0 | 1 | 57 | 16 | 72 | 2.50e-28 | 105 |
| MsG0180001843.01.T01 | MTR_3g452380 | 78.947 | 57 | 12 | 0 | 1 | 57 | 16 | 72 | 2.54e-28 | 104 |
| MsG0180001843.01.T01 | MTR_8g087860 | 78.947 | 57 | 12 | 0 | 1 | 57 | 17 | 73 | 6.23e-28 | 103 |
| MsG0180001843.01.T01 | MTR_8g066260 | 82.456 | 57 | 10 | 0 | 1 | 57 | 1 | 57 | 1.66e-27 | 102 |
| MsG0180001843.01.T01 | MTR_6g464720 | 84.211 | 57 | 9 | 0 | 1 | 57 | 1 | 57 | 2.03e-27 | 102 |
| MsG0180001843.01.T01 | MTR_4g102530 | 56.701 | 97 | 35 | 2 | 1 | 96 | 1 | 91 | 7.32e-27 | 100 |
| MsG0180001843.01.T01 | MTR_7g075870 | 80.702 | 57 | 11 | 0 | 1 | 57 | 1 | 57 | 8.18e-27 | 100 |
| MsG0180001843.01.T01 | MTR_7g075870 | 80.702 | 57 | 11 | 0 | 1 | 57 | 1 | 57 | 9.09e-27 | 100 |
| MsG0180001843.01.T01 | MTR_8g033220 | 77.193 | 57 | 13 | 0 | 1 | 57 | 1 | 57 | 4.58e-26 | 98.6 |
| MsG0180001843.01.T01 | MTR_8g033220 | 77.193 | 57 | 13 | 0 | 1 | 57 | 1 | 57 | 5.39e-26 | 98.6 |
| MsG0180001843.01.T01 | MTR_1g101970 | 78.947 | 57 | 12 | 0 | 1 | 57 | 1 | 57 | 8.17e-26 | 97.1 |
| MsG0180001843.01.T01 | MTR_5g046790 | 77.193 | 57 | 13 | 0 | 1 | 57 | 1 | 57 | 4.15e-25 | 95.9 |
| MsG0180001843.01.T01 | MTR_1g053070 | 78.947 | 57 | 12 | 0 | 1 | 57 | 1 | 57 | 7.35e-25 | 95.9 |
| MsG0180001843.01.T01 | MTR_5g066960 | 68.421 | 57 | 18 | 0 | 1 | 57 | 1 | 57 | 2.20e-24 | 89.7 |
| MsG0180001843.01.T01 | MTR_0003s0590 | 75.439 | 57 | 14 | 0 | 1 | 57 | 1 | 57 | 4.20e-24 | 94.4 |
| MsG0180001843.01.T01 | MTR_7g016630 | 73.684 | 57 | 15 | 0 | 1 | 57 | 1 | 57 | 1.23e-23 | 92.8 |
| MsG0180001843.01.T01 | MTR_2g009890 | 71.930 | 57 | 16 | 0 | 1 | 57 | 1 | 57 | 2.78e-23 | 92.4 |
| MsG0180001843.01.T01 | MTR_4g036050 | 70.175 | 57 | 17 | 0 | 1 | 57 | 1 | 57 | 8.49e-23 | 89.0 |
| MsG0180001843.01.T01 | MTR_4g036050 | 70.175 | 57 | 17 | 0 | 1 | 57 | 1 | 57 | 1.01e-22 | 89.0 |
| MsG0180001843.01.T01 | MTR_4g036050 | 70.175 | 57 | 17 | 0 | 1 | 57 | 1 | 57 | 1.05e-22 | 89.0 |
| MsG0180001843.01.T01 | MTR_4g036050 | 70.175 | 57 | 17 | 0 | 1 | 57 | 1 | 57 | 1.37e-22 | 89.0 |
| MsG0180001843.01.T01 | MTR_3g088615 | 64.912 | 57 | 20 | 0 | 1 | 57 | 1 | 57 | 2.83e-22 | 87.8 |
| MsG0180001843.01.T01 | MTR_3g113030 | 66.667 | 57 | 19 | 0 | 1 | 57 | 1 | 57 | 4.50e-22 | 88.2 |
| MsG0180001843.01.T01 | MTR_5g031000 | 52.439 | 82 | 36 | 1 | 1 | 82 | 1 | 79 | 1.10e-21 | 87.0 |
| MsG0180001843.01.T01 | MTR_1g038300 | 66.667 | 57 | 19 | 0 | 1 | 57 | 1 | 57 | 1.32e-21 | 87.0 |
| MsG0180001843.01.T01 | MTR_4g093030 | 63.492 | 63 | 20 | 1 | 1 | 60 | 1 | 63 | 1.32e-21 | 85.5 |
| MsG0180001843.01.T01 | MTR_5g031000 | 52.439 | 82 | 36 | 1 | 1 | 82 | 1 | 79 | 1.65e-21 | 87.0 |
| MsG0180001843.01.T01 | MTR_5g032520 | 68.421 | 57 | 18 | 0 | 1 | 57 | 1 | 57 | 1.83e-21 | 86.7 |
| MsG0180001843.01.T01 | MTR_5g032150 | 68.421 | 57 | 18 | 0 | 1 | 57 | 1 | 57 | 2.33e-21 | 86.3 |
| MsG0180001843.01.T01 | MTR_4g084740 | 66.667 | 57 | 19 | 0 | 1 | 57 | 1 | 57 | 3.59e-21 | 87.8 |
| MsG0180001843.01.T01 | MTR_5g021270 | 64.912 | 57 | 20 | 0 | 1 | 57 | 1 | 57 | 6.78e-21 | 85.1 |
| MsG0180001843.01.T01 | MTR_5g021270 | 64.912 | 57 | 20 | 0 | 1 | 57 | 1 | 57 | 7.06e-21 | 85.1 |
| MsG0180001843.01.T01 | MTR_5g066180 | 44.211 | 95 | 49 | 1 | 1 | 91 | 1 | 95 | 1.37e-20 | 84.3 |
| MsG0180001843.01.T01 | MTR_1g029670 | 59.649 | 57 | 23 | 0 | 1 | 57 | 1 | 57 | 2.40e-19 | 80.1 |
| MsG0180001843.01.T01 | MTR_3g102570 | 64.912 | 57 | 20 | 0 | 1 | 57 | 1 | 57 | 6.39e-19 | 81.3 |
| MsG0180001843.01.T01 | MTR_1g041615 | 80.952 | 42 | 8 | 0 | 16 | 57 | 20 | 61 | 4.97e-18 | 75.5 |
| MsG0180001843.01.T01 | MTR_4g093970 | 57.895 | 57 | 24 | 0 | 1 | 57 | 27 | 83 | 8.83e-18 | 77.0 |
| MsG0180001843.01.T01 | MTR_2g030740 | 58.929 | 56 | 23 | 0 | 2 | 57 | 9 | 64 | 1.72e-16 | 73.6 |
| MsG0180001843.01.T01 | MTR_1g108580 | 57.143 | 56 | 24 | 0 | 2 | 57 | 9 | 64 | 7.09e-16 | 72.0 |
| MsG0180001843.01.T01 | MTR_8g086290 | 55.357 | 56 | 25 | 0 | 2 | 57 | 12 | 67 | 8.34e-16 | 70.9 |
| MsG0180001843.01.T01 | MTR_1g108510 | 55.357 | 56 | 25 | 0 | 2 | 57 | 9 | 64 | 1.55e-15 | 70.9 |
| MsG0180001843.01.T01 | MTR_3g030770 | 55.357 | 56 | 25 | 0 | 2 | 57 | 9 | 64 | 1.68e-15 | 70.9 |
| MsG0180001843.01.T01 | MTR_3g052920 | 58.929 | 56 | 23 | 0 | 2 | 57 | 9 | 64 | 2.63e-15 | 70.5 |
| MsG0180001843.01.T01 | MTR_2g093190 | 53.571 | 56 | 26 | 0 | 2 | 57 | 9 | 64 | 2.76e-15 | 70.5 |
| MsG0180001843.01.T01 | MTR_2g105290 | 54.386 | 57 | 26 | 0 | 1 | 57 | 11 | 67 | 3.37e-15 | 69.3 |
| MsG0180001843.01.T01 | MTR_1g012570 | 58.929 | 56 | 23 | 0 | 2 | 57 | 9 | 64 | 6.45e-15 | 69.7 |
| MsG0180001843.01.T01 | MTR_8g079502 | 42.169 | 83 | 43 | 1 | 1 | 78 | 1 | 83 | 7.50e-15 | 68.2 |
| MsG0180001843.01.T01 | MTR_3g052870 | 55.357 | 56 | 25 | 0 | 2 | 57 | 9 | 64 | 8.84e-15 | 68.9 |
| MsG0180001843.01.T01 | MTR_8g043650 | 55.357 | 56 | 25 | 0 | 2 | 57 | 9 | 64 | 1.08e-14 | 68.9 |
| MsG0180001843.01.T01 | MTR_5g045560 | 57.895 | 57 | 24 | 0 | 1 | 57 | 8 | 64 | 1.13e-14 | 68.9 |
| MsG0180001843.01.T01 | MTR_1g105910 | 55.357 | 56 | 25 | 0 | 2 | 57 | 9 | 64 | 1.22e-14 | 68.9 |
| MsG0180001843.01.T01 | MTR_1g105920 | 55.357 | 56 | 25 | 0 | 2 | 57 | 9 | 64 | 1.36e-14 | 68.6 |
| MsG0180001843.01.T01 | MTR_1g075600 | 55.357 | 56 | 25 | 0 | 2 | 57 | 9 | 64 | 1.38e-14 | 68.6 |
| MsG0180001843.01.T01 | MTR_1g077360 | 55.357 | 56 | 25 | 0 | 2 | 57 | 9 | 64 | 1.41e-14 | 68.6 |
| MsG0180001843.01.T01 | MTR_2g085280 | 57.143 | 56 | 24 | 0 | 2 | 57 | 9 | 64 | 1.43e-14 | 68.6 |
| MsG0180001843.01.T01 | MTR_2g085250 | 57.143 | 56 | 24 | 0 | 2 | 57 | 9 | 64 | 1.52e-14 | 68.6 |
| MsG0180001843.01.T01 | MTR_8g051580 | 52.632 | 57 | 27 | 0 | 1 | 57 | 1 | 57 | 1.53e-14 | 67.4 |
| MsG0180001843.01.T01 | MTR_1g047550 | 39.796 | 98 | 49 | 2 | 1 | 88 | 1 | 98 | 2.47e-14 | 67.0 |
| MsG0180001843.01.T01 | MTR_1g054265 | 52.632 | 57 | 27 | 0 | 1 | 57 | 1 | 57 | 3.78e-14 | 66.2 |
| MsG0180001843.01.T01 | MTR_5g055100 | 57.143 | 56 | 24 | 0 | 2 | 57 | 9 | 64 | 5.11e-14 | 67.0 |
| MsG0180001843.01.T01 | MTR_0121s0100 | 51.786 | 56 | 27 | 0 | 2 | 57 | 9 | 64 | 5.18e-14 | 65.1 |
| MsG0180001843.01.T01 | MTR_5g053390 | 57.143 | 56 | 24 | 0 | 2 | 57 | 9 | 64 | 5.79e-14 | 67.0 |
| MsG0180001843.01.T01 | MTR_1g063160 | 50.877 | 57 | 28 | 0 | 1 | 57 | 1 | 57 | 1.55e-13 | 64.7 |
| MsG0180001843.01.T01 | MTR_4g108720 | 52.830 | 53 | 25 | 0 | 1 | 53 | 1 | 53 | 2.18e-13 | 66.2 |
| MsG0180001843.01.T01 | MTR_4g131030 | 50.877 | 57 | 28 | 0 | 1 | 57 | 1 | 57 | 2.31e-13 | 65.1 |
| MsG0180001843.01.T01 | MTR_1g106070 | 51.786 | 56 | 27 | 0 | 2 | 57 | 9 | 64 | 2.61e-13 | 64.3 |
| MsG0180001843.01.T01 | MTR_5g041650 | 52.830 | 53 | 25 | 0 | 1 | 53 | 38 | 90 | 3.19e-13 | 65.9 |
| MsG0180001843.01.T01 | MTR_4g094632 | 50.877 | 57 | 28 | 0 | 1 | 57 | 1 | 57 | 3.49e-13 | 63.5 |
| MsG0180001843.01.T01 | MTR_7g028448 | 66.667 | 42 | 14 | 0 | 16 | 57 | 26 | 67 | 1.07e-12 | 62.4 |
| MsG0180001843.01.T01 | MTR_4g036915 | 66.667 | 42 | 14 | 0 | 16 | 57 | 26 | 67 | 1.07e-12 | 62.4 |
| MsG0180001843.01.T01 | MTR_3g030780 | 48.214 | 56 | 29 | 0 | 2 | 57 | 9 | 64 | 3.02e-12 | 60.5 |
| MsG0180001843.01.T01 | MTR_4g094638 | 47.368 | 57 | 30 | 0 | 1 | 57 | 1 | 57 | 3.90e-12 | 61.2 |
| MsG0180001843.01.T01 | MTR_0121s0080 | 51.724 | 58 | 26 | 1 | 2 | 57 | 7 | 64 | 4.11e-12 | 62.0 |
| MsG0180001843.01.T01 | MTR_3g080940 | 39.286 | 84 | 48 | 1 | 1 | 84 | 8 | 88 | 4.52e-12 | 61.2 |
| MsG0180001843.01.T01 | MTR_8g046350 | 47.368 | 57 | 30 | 0 | 1 | 57 | 1 | 57 | 1.22e-11 | 59.3 |
| MsG0180001843.01.T01 | MTR_4g117140 | 96.667 | 30 | 1 | 0 | 103 | 132 | 398 | 427 | 1.43e-11 | 61.2 |
| MsG0180001843.01.T01 | MTR_6g018920 | 46.939 | 49 | 26 | 0 | 1 | 49 | 1 | 49 | 6.20e-11 | 59.3 |
| MsG0180001843.01.T01 | MTR_6g005440 | 46.939 | 49 | 26 | 0 | 1 | 49 | 1 | 49 | 9.59e-11 | 58.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180001843.01.T01 | AT2G45650 | 96.491 | 57 | 2 | 0 | 1 | 57 | 1 | 57 | 2.09e-32 | 115 |
| MsG0180001843.01.T01 | AT5G15800 | 94.737 | 57 | 3 | 0 | 1 | 57 | 1 | 57 | 1.30e-31 | 113 |
| MsG0180001843.01.T01 | AT1G24260 | 94.737 | 57 | 3 | 0 | 1 | 57 | 1 | 57 | 1.36e-31 | 113 |
| MsG0180001843.01.T01 | AT1G24260 | 94.737 | 57 | 3 | 0 | 1 | 57 | 1 | 57 | 1.67e-31 | 113 |
| MsG0180001843.01.T01 | AT2G03710 | 89.474 | 57 | 6 | 0 | 1 | 57 | 1 | 57 | 1.69e-31 | 111 |
| MsG0180001843.01.T01 | AT1G24260 | 94.737 | 57 | 3 | 0 | 1 | 57 | 1 | 57 | 1.74e-31 | 113 |
| MsG0180001843.01.T01 | AT5G15800 | 94.737 | 57 | 3 | 0 | 1 | 57 | 1 | 57 | 2.11e-31 | 113 |
| MsG0180001843.01.T01 | AT3G02310 | 91.228 | 57 | 5 | 0 | 1 | 57 | 1 | 57 | 3.73e-31 | 111 |
| MsG0180001843.01.T01 | AT2G03710 | 89.474 | 57 | 6 | 0 | 1 | 57 | 1 | 57 | 5.44e-31 | 112 |
| MsG0180001843.01.T01 | AT2G03710 | 89.474 | 57 | 6 | 0 | 1 | 57 | 1 | 57 | 5.74e-31 | 112 |
| MsG0180001843.01.T01 | AT3G02310 | 91.228 | 57 | 5 | 0 | 1 | 57 | 1 | 57 | 8.39e-31 | 111 |
| MsG0180001843.01.T01 | AT4G09960 | 80.702 | 57 | 11 | 0 | 1 | 57 | 1 | 57 | 3.01e-29 | 106 |
| MsG0180001843.01.T01 | AT4G09960 | 80.702 | 57 | 11 | 0 | 1 | 57 | 2 | 58 | 4.18e-29 | 106 |
| MsG0180001843.01.T01 | AT4G09960 | 80.702 | 57 | 11 | 0 | 1 | 57 | 1 | 57 | 4.31e-29 | 106 |
| MsG0180001843.01.T01 | AT4G09960 | 80.702 | 57 | 11 | 0 | 1 | 57 | 11 | 67 | 6.34e-29 | 106 |
| MsG0180001843.01.T01 | AT5G60910 | 84.211 | 57 | 9 | 0 | 1 | 57 | 1 | 57 | 7.95e-29 | 106 |
| MsG0180001843.01.T01 | AT4G09960 | 80.702 | 57 | 11 | 0 | 1 | 57 | 27 | 83 | 1.48e-28 | 105 |
| MsG0180001843.01.T01 | AT3G61120 | 62.366 | 93 | 24 | 2 | 1 | 82 | 1 | 93 | 3.95e-28 | 104 |
| MsG0180001843.01.T01 | AT2G42830 | 78.947 | 57 | 12 | 0 | 1 | 57 | 16 | 72 | 5.68e-28 | 104 |
| MsG0180001843.01.T01 | AT2G42830 | 78.947 | 57 | 12 | 0 | 1 | 57 | 16 | 72 | 6.39e-28 | 103 |
| MsG0180001843.01.T01 | AT3G58780 | 78.947 | 57 | 12 | 0 | 1 | 57 | 16 | 72 | 6.66e-28 | 103 |
| MsG0180001843.01.T01 | AT4G09960 | 80.702 | 57 | 11 | 0 | 1 | 57 | 96 | 152 | 6.68e-28 | 105 |
| MsG0180001843.01.T01 | AT4G18960 | 82.143 | 56 | 10 | 0 | 2 | 57 | 18 | 73 | 7.10e-28 | 103 |
| MsG0180001843.01.T01 | AT3G58780 | 78.947 | 57 | 12 | 0 | 1 | 57 | 16 | 72 | 8.25e-28 | 103 |
| MsG0180001843.01.T01 | AT3G58780 | 78.947 | 57 | 12 | 0 | 1 | 57 | 22 | 78 | 8.68e-28 | 103 |
| MsG0180001843.01.T01 | AT1G69120 | 80.702 | 57 | 11 | 0 | 1 | 57 | 1 | 57 | 1.43e-27 | 102 |
| MsG0180001843.01.T01 | AT3G58780 | 78.947 | 57 | 12 | 0 | 1 | 57 | 16 | 72 | 1.59e-27 | 103 |
| MsG0180001843.01.T01 | AT3G58780 | 78.947 | 57 | 12 | 0 | 1 | 57 | 16 | 72 | 1.69e-27 | 103 |
| MsG0180001843.01.T01 | AT1G26310 | 82.456 | 57 | 10 | 0 | 1 | 57 | 1 | 57 | 2.54e-27 | 102 |
| MsG0180001843.01.T01 | AT4G11880 | 82.456 | 57 | 10 | 0 | 1 | 57 | 1 | 57 | 4.07e-27 | 100 |
| MsG0180001843.01.T01 | AT4G11880 | 82.456 | 57 | 10 | 0 | 1 | 57 | 1 | 57 | 4.07e-27 | 100 |
| MsG0180001843.01.T01 | AT1G69120 | 80.702 | 57 | 11 | 0 | 1 | 57 | 1 | 57 | 4.19e-27 | 102 |
| MsG0180001843.01.T01 | AT5G62165 | 75.439 | 57 | 14 | 0 | 1 | 57 | 1 | 57 | 7.87e-27 | 97.4 |
| MsG0180001843.01.T01 | AT4G11880 | 82.456 | 57 | 10 | 0 | 1 | 57 | 1 | 57 | 1.07e-26 | 100 |
| MsG0180001843.01.T01 | AT4G11880 | 82.456 | 57 | 10 | 0 | 1 | 57 | 1 | 57 | 1.07e-26 | 100 |
| MsG0180001843.01.T01 | AT5G62165 | 75.439 | 57 | 14 | 0 | 1 | 57 | 1 | 57 | 1.08e-26 | 98.6 |
| MsG0180001843.01.T01 | AT5G62165 | 75.439 | 57 | 14 | 0 | 1 | 57 | 1 | 57 | 1.08e-26 | 98.6 |
| MsG0180001843.01.T01 | AT5G62165 | 75.439 | 57 | 14 | 0 | 1 | 57 | 1 | 57 | 1.08e-26 | 98.6 |
| MsG0180001843.01.T01 | AT5G62165 | 75.439 | 57 | 14 | 0 | 1 | 57 | 1 | 57 | 1.25e-26 | 98.2 |
| MsG0180001843.01.T01 | AT5G62165 | 75.439 | 57 | 14 | 0 | 1 | 57 | 1 | 57 | 1.25e-26 | 98.2 |
| MsG0180001843.01.T01 | AT5G62165 | 75.439 | 57 | 14 | 0 | 1 | 57 | 1 | 57 | 1.25e-26 | 98.2 |
| MsG0180001843.01.T01 | AT5G62165 | 75.439 | 57 | 14 | 0 | 1 | 57 | 1 | 57 | 1.25e-26 | 98.2 |
| MsG0180001843.01.T01 | AT5G62165 | 75.439 | 57 | 14 | 0 | 1 | 57 | 1 | 57 | 1.25e-26 | 98.2 |
| MsG0180001843.01.T01 | AT4G22950 | 78.947 | 57 | 12 | 0 | 1 | 57 | 1 | 57 | 3.01e-26 | 97.8 |
| MsG0180001843.01.T01 | AT2G45660 | 77.193 | 57 | 13 | 0 | 1 | 57 | 1 | 57 | 4.43e-26 | 97.1 |
| MsG0180001843.01.T01 | AT5G62165 | 75.439 | 57 | 14 | 0 | 1 | 57 | 1 | 57 | 6.51e-26 | 97.4 |
| MsG0180001843.01.T01 | AT5G62165 | 75.439 | 57 | 14 | 0 | 1 | 57 | 1 | 57 | 6.51e-26 | 97.4 |
| MsG0180001843.01.T01 | AT5G62165 | 75.439 | 57 | 14 | 0 | 1 | 57 | 1 | 57 | 7.51e-26 | 97.8 |
| MsG0180001843.01.T01 | AT5G62165 | 75.439 | 57 | 14 | 0 | 1 | 57 | 1 | 57 | 7.51e-26 | 97.8 |
| MsG0180001843.01.T01 | AT5G62165 | 75.439 | 57 | 14 | 0 | 1 | 57 | 1 | 57 | 7.51e-26 | 97.8 |
| MsG0180001843.01.T01 | AT4G22950 | 78.947 | 57 | 12 | 0 | 1 | 57 | 1 | 57 | 1.36e-25 | 97.4 |
| MsG0180001843.01.T01 | AT4G22950 | 78.947 | 57 | 12 | 0 | 1 | 57 | 1 | 57 | 1.36e-25 | 97.4 |
| MsG0180001843.01.T01 | AT3G57390 | 78.947 | 57 | 12 | 0 | 1 | 57 | 1 | 57 | 1.51e-25 | 97.4 |
| MsG0180001843.01.T01 | AT3G30260 | 77.193 | 57 | 13 | 0 | 1 | 57 | 1 | 57 | 1.67e-25 | 97.8 |
| MsG0180001843.01.T01 | AT2G45660 | 77.193 | 57 | 13 | 0 | 1 | 57 | 1 | 57 | 2.00e-25 | 96.7 |
| MsG0180001843.01.T01 | AT3G57390 | 78.947 | 57 | 12 | 0 | 1 | 57 | 1 | 57 | 2.80e-25 | 97.4 |
| MsG0180001843.01.T01 | AT3G57230 | 57.317 | 82 | 31 | 1 | 1 | 78 | 1 | 82 | 3.74e-24 | 91.7 |
| MsG0180001843.01.T01 | AT5G13790 | 73.684 | 57 | 15 | 0 | 1 | 57 | 1 | 57 | 1.32e-23 | 93.2 |
| MsG0180001843.01.T01 | AT5G13790 | 73.684 | 57 | 15 | 0 | 1 | 57 | 1 | 57 | 1.42e-23 | 93.2 |
| MsG0180001843.01.T01 | AT3G57230 | 71.930 | 57 | 16 | 0 | 1 | 57 | 1 | 57 | 2.23e-23 | 92.0 |
| MsG0180001843.01.T01 | AT3G57230 | 71.930 | 57 | 16 | 0 | 1 | 57 | 1 | 57 | 2.23e-23 | 92.0 |
| MsG0180001843.01.T01 | AT2G14210 | 70.175 | 57 | 17 | 0 | 1 | 57 | 1 | 57 | 2.58e-22 | 89.0 |
| MsG0180001843.01.T01 | AT5G51860 | 68.421 | 57 | 18 | 0 | 1 | 57 | 1 | 57 | 2.71e-22 | 88.2 |
| MsG0180001843.01.T01 | AT5G51860 | 68.421 | 57 | 18 | 0 | 1 | 57 | 1 | 57 | 2.89e-22 | 88.6 |
| MsG0180001843.01.T01 | AT3G54340 | 64.912 | 57 | 20 | 0 | 1 | 57 | 1 | 57 | 2.91e-22 | 89.0 |
| MsG0180001843.01.T01 | AT5G20240 | 68.421 | 57 | 18 | 0 | 1 | 57 | 1 | 57 | 2.98e-22 | 87.0 |
| MsG0180001843.01.T01 | AT2G14210 | 70.175 | 57 | 17 | 0 | 1 | 57 | 1 | 57 | 3.35e-22 | 89.0 |
| MsG0180001843.01.T01 | AT5G10140 | 68.421 | 57 | 18 | 0 | 1 | 57 | 1 | 57 | 3.69e-22 | 87.0 |
| MsG0180001843.01.T01 | AT5G10140 | 68.421 | 57 | 18 | 0 | 1 | 57 | 1 | 57 | 4.20e-22 | 87.8 |
| MsG0180001843.01.T01 | AT5G10140 | 68.421 | 57 | 18 | 0 | 1 | 57 | 1 | 57 | 4.41e-22 | 87.4 |
| MsG0180001843.01.T01 | AT5G10140 | 68.421 | 57 | 18 | 0 | 1 | 57 | 1 | 57 | 5.32e-22 | 87.0 |
| MsG0180001843.01.T01 | AT4G37940 | 68.421 | 57 | 18 | 0 | 1 | 57 | 1 | 57 | 5.76e-22 | 86.7 |
| MsG0180001843.01.T01 | AT5G20240 | 68.421 | 57 | 18 | 0 | 1 | 57 | 1 | 57 | 8.13e-22 | 87.0 |
| MsG0180001843.01.T01 | AT4G37940 | 68.421 | 57 | 18 | 0 | 1 | 57 | 1 | 57 | 8.81e-22 | 87.4 |
| MsG0180001843.01.T01 | AT4G37940 | 68.421 | 57 | 18 | 0 | 1 | 57 | 1 | 57 | 9.80e-22 | 87.4 |
| MsG0180001843.01.T01 | AT1G71692 | 66.667 | 57 | 19 | 0 | 1 | 57 | 1 | 57 | 1.44e-21 | 86.7 |
| MsG0180001843.01.T01 | AT5G51870 | 64.912 | 57 | 20 | 0 | 1 | 57 | 1 | 57 | 2.57e-21 | 85.1 |
| MsG0180001843.01.T01 | AT5G65070 | 56.579 | 76 | 26 | 1 | 1 | 76 | 1 | 69 | 3.92e-21 | 85.9 |
| MsG0180001843.01.T01 | AT5G65070 | 66.667 | 57 | 19 | 0 | 1 | 57 | 1 | 57 | 3.98e-21 | 84.0 |
| MsG0180001843.01.T01 | AT5G23260 | 66.667 | 57 | 19 | 0 | 1 | 57 | 1 | 57 | 6.53e-21 | 85.5 |
| MsG0180001843.01.T01 | AT5G65070 | 66.667 | 57 | 19 | 0 | 1 | 57 | 1 | 57 | 6.78e-21 | 84.7 |
| MsG0180001843.01.T01 | AT5G51870 | 64.912 | 57 | 20 | 0 | 1 | 57 | 1 | 57 | 6.89e-21 | 84.7 |
| MsG0180001843.01.T01 | AT5G23260 | 66.667 | 57 | 19 | 0 | 1 | 57 | 1 | 57 | 7.18e-21 | 85.5 |
| MsG0180001843.01.T01 | AT5G51870 | 64.912 | 57 | 20 | 0 | 1 | 57 | 24 | 80 | 7.23e-21 | 84.3 |
| MsG0180001843.01.T01 | AT2G22540 | 66.667 | 57 | 19 | 0 | 1 | 57 | 1 | 57 | 7.60e-21 | 85.5 |
| MsG0180001843.01.T01 | AT2G22540 | 66.667 | 57 | 19 | 0 | 1 | 57 | 1 | 57 | 7.60e-21 | 85.5 |
| MsG0180001843.01.T01 | AT5G23260 | 66.667 | 57 | 19 | 0 | 1 | 57 | 17 | 73 | 9.44e-21 | 85.5 |
| MsG0180001843.01.T01 | AT5G23260 | 66.667 | 57 | 19 | 0 | 1 | 57 | 17 | 73 | 9.68e-21 | 85.5 |
| MsG0180001843.01.T01 | AT1G22130 | 68.421 | 57 | 18 | 0 | 1 | 57 | 1 | 57 | 1.23e-20 | 86.3 |
| MsG0180001843.01.T01 | AT5G51870 | 64.912 | 57 | 20 | 0 | 1 | 57 | 1 | 57 | 1.48e-20 | 84.3 |
| MsG0180001843.01.T01 | AT5G65070 | 66.667 | 57 | 19 | 0 | 1 | 57 | 1 | 57 | 1.49e-20 | 84.0 |
| MsG0180001843.01.T01 | AT5G51870 | 64.912 | 57 | 20 | 0 | 1 | 57 | 11 | 67 | 1.77e-20 | 84.3 |
| MsG0180001843.01.T01 | AT5G65070 | 66.667 | 57 | 19 | 0 | 1 | 57 | 1 | 57 | 1.86e-20 | 84.3 |
| MsG0180001843.01.T01 | AT1G77980 | 66.667 | 57 | 19 | 0 | 1 | 57 | 1 | 57 | 2.57e-20 | 85.5 |
| MsG0180001843.01.T01 | AT5G65050 | 49.367 | 79 | 27 | 1 | 1 | 66 | 1 | 79 | 4.75e-20 | 82.0 |
| MsG0180001843.01.T01 | AT2G22630 | 63.158 | 57 | 21 | 0 | 1 | 57 | 1 | 57 | 7.72e-20 | 82.4 |
| MsG0180001843.01.T01 | AT2G22630 | 63.158 | 57 | 21 | 0 | 1 | 57 | 1 | 57 | 7.72e-20 | 82.4 |
| MsG0180001843.01.T01 | AT2G22540 | 62.069 | 58 | 22 | 0 | 1 | 58 | 1 | 58 | 1.24e-19 | 82.0 |
| MsG0180001843.01.T01 | AT5G65080 | 70.909 | 55 | 16 | 0 | 1 | 55 | 8 | 62 | 1.35e-19 | 80.9 |
| MsG0180001843.01.T01 | AT5G65050 | 47.191 | 89 | 34 | 1 | 1 | 76 | 1 | 89 | 1.54e-19 | 80.5 |
| MsG0180001843.01.T01 | AT5G65050 | 47.191 | 89 | 34 | 1 | 1 | 76 | 1 | 89 | 1.59e-19 | 80.9 |
| MsG0180001843.01.T01 | AT4G24540 | 58.462 | 65 | 27 | 0 | 1 | 65 | 1 | 65 | 1.89e-19 | 81.3 |
| MsG0180001843.01.T01 | AT5G65050 | 47.191 | 89 | 34 | 1 | 1 | 76 | 1 | 89 | 1.93e-19 | 80.9 |
| MsG0180001843.01.T01 | AT5G65080 | 70.909 | 55 | 16 | 0 | 1 | 55 | 8 | 62 | 2.63e-19 | 80.5 |
| MsG0180001843.01.T01 | AT5G65060 | 60.714 | 56 | 22 | 0 | 1 | 56 | 1 | 56 | 9.43e-18 | 76.3 |
| MsG0180001843.01.T01 | AT5G65060 | 60.714 | 56 | 22 | 0 | 1 | 56 | 1 | 56 | 9.71e-18 | 75.9 |
| MsG0180001843.01.T01 | AT5G65060 | 60.714 | 56 | 22 | 0 | 1 | 56 | 1 | 56 | 1.01e-17 | 76.3 |
| MsG0180001843.01.T01 | AT1G77950 | 61.404 | 57 | 22 | 0 | 1 | 57 | 1 | 57 | 1.72e-17 | 76.6 |
| MsG0180001843.01.T01 | AT1G77950 | 61.404 | 57 | 22 | 0 | 1 | 57 | 1 | 57 | 1.72e-17 | 76.6 |
| MsG0180001843.01.T01 | AT1G77950 | 61.404 | 57 | 22 | 0 | 1 | 57 | 1 | 57 | 1.72e-17 | 76.6 |
| MsG0180001843.01.T01 | AT1G77950 | 61.404 | 57 | 22 | 0 | 1 | 57 | 1 | 57 | 1.72e-17 | 76.6 |
| MsG0180001843.01.T01 | AT1G31140 | 57.895 | 57 | 24 | 0 | 1 | 57 | 1 | 57 | 4.25e-17 | 75.1 |
| MsG0180001843.01.T01 | AT1G31140 | 57.895 | 57 | 24 | 0 | 1 | 57 | 1 | 57 | 4.61e-17 | 74.7 |
| MsG0180001843.01.T01 | AT1G01530 | 57.895 | 57 | 24 | 0 | 1 | 57 | 6 | 62 | 3.30e-16 | 73.2 |
| MsG0180001843.01.T01 | AT4G37435 | 56.140 | 57 | 25 | 0 | 1 | 57 | 1 | 57 | 7.17e-16 | 71.2 |
| MsG0180001843.01.T01 | AT1G18750 | 51.724 | 58 | 28 | 0 | 1 | 58 | 1 | 58 | 3.76e-15 | 71.6 |
| MsG0180001843.01.T01 | AT1G18750 | 51.724 | 58 | 28 | 0 | 1 | 58 | 1 | 58 | 4.30e-15 | 71.2 |
| MsG0180001843.01.T01 | AT1G18750 | 51.724 | 58 | 28 | 0 | 1 | 58 | 1 | 58 | 5.36e-15 | 71.2 |
| MsG0180001843.01.T01 | AT1G77080 | 62.500 | 56 | 21 | 0 | 1 | 56 | 1 | 56 | 6.30e-15 | 68.6 |
| MsG0180001843.01.T01 | AT1G77080 | 62.500 | 56 | 21 | 0 | 1 | 56 | 1 | 56 | 8.35e-15 | 67.4 |
| MsG0180001843.01.T01 | AT1G77080 | 62.500 | 56 | 21 | 0 | 1 | 56 | 1 | 56 | 9.47e-15 | 67.8 |
| MsG0180001843.01.T01 | AT1G77080 | 62.500 | 56 | 21 | 0 | 1 | 56 | 1 | 56 | 1.40e-14 | 68.2 |
| MsG0180001843.01.T01 | AT1G77080 | 62.500 | 56 | 21 | 0 | 1 | 56 | 1 | 56 | 1.61e-14 | 67.8 |
| MsG0180001843.01.T01 | AT1G77080 | 62.500 | 56 | 21 | 0 | 1 | 56 | 1 | 56 | 2.92e-14 | 67.8 |
| MsG0180001843.01.T01 | AT1G65360 | 50.877 | 57 | 28 | 0 | 1 | 57 | 6 | 62 | 5.16e-14 | 67.0 |
| MsG0180001843.01.T01 | AT2G03060 | 54.717 | 53 | 24 | 0 | 1 | 53 | 1 | 53 | 8.82e-14 | 67.8 |
| MsG0180001843.01.T01 | AT2G03060 | 54.717 | 53 | 24 | 0 | 1 | 53 | 1 | 53 | 8.82e-14 | 67.8 |
| MsG0180001843.01.T01 | AT2G03060 | 54.717 | 53 | 24 | 0 | 1 | 53 | 1 | 53 | 8.82e-14 | 67.8 |
| MsG0180001843.01.T01 | AT4G36590 | 57.143 | 56 | 24 | 0 | 2 | 57 | 7 | 62 | 9.86e-14 | 66.6 |
| MsG0180001843.01.T01 | AT2G03060 | 54.717 | 53 | 24 | 0 | 1 | 53 | 1 | 53 | 1.02e-13 | 67.4 |
| MsG0180001843.01.T01 | AT1G72350 | 53.571 | 56 | 26 | 0 | 2 | 57 | 43 | 98 | 2.11e-13 | 65.5 |
| MsG0180001843.01.T01 | AT5G60440 | 53.571 | 56 | 26 | 0 | 2 | 57 | 7 | 62 | 2.46e-13 | 65.9 |
| MsG0180001843.01.T01 | AT3G66656 | 49.123 | 57 | 29 | 0 | 1 | 57 | 1 | 57 | 3.36e-13 | 63.9 |
| MsG0180001843.01.T01 | AT1G69540 | 50.943 | 53 | 26 | 0 | 1 | 53 | 1 | 53 | 1.75e-12 | 63.9 |
| MsG0180001843.01.T01 | AT2G34440 | 47.368 | 57 | 30 | 0 | 1 | 57 | 1 | 57 | 2.03e-12 | 61.6 |
| MsG0180001843.01.T01 | AT1G69540 | 50.943 | 53 | 26 | 0 | 1 | 53 | 1 | 53 | 2.15e-12 | 63.5 |
| MsG0180001843.01.T01 | AT1G47760 | 53.061 | 49 | 23 | 0 | 1 | 49 | 1 | 49 | 3.22e-12 | 61.6 |
| MsG0180001843.01.T01 | AT3G04100 | 48.214 | 56 | 29 | 0 | 2 | 57 | 14 | 69 | 7.08e-12 | 60.8 |
| MsG0180001843.01.T01 | AT2G24840 | 49.123 | 57 | 29 | 0 | 1 | 57 | 62 | 118 | 1.41e-11 | 60.8 |
| MsG0180001843.01.T01 | AT1G29962 | 51.786 | 56 | 27 | 0 | 2 | 57 | 8 | 63 | 2.83e-11 | 58.9 |
Find 51 sgRNAs with CRISPR-Local
Find 75 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGATTACCCTGCATCATTTC+TGG | 0.137991 | 1:-28104885 | None:intergenic |
| TAAGGATCTGGAGGAGGATA+AGG | 0.339463 | 1:+28104640 | MsG0180001843.01.T01:CDS |
| TTACCACCCATTTGGTTCAT+TGG | 0.340765 | 1:-28104800 | None:intergenic |
| CCCTGCATCATTTCTGGGCC+TGG | 0.357167 | 1:-28104879 | None:intergenic |
| GATTACCCTGCATCATTTCT+GGG | 0.396516 | 1:-28104884 | None:intergenic |
| CGGGAATGTTACCACCCATT+TGG | 0.397076 | 1:-28104808 | None:intergenic |
| TGGTTCATTGGCATACTCAT+TGG | 0.433991 | 1:-28104788 | None:intergenic |
| ATTGGCATACTCAGCGGGCC+TGG | 0.436759 | 1:-28104740 | None:intergenic |
| GGTAACATTCCCGCTGTTCA+AGG | 0.449548 | 1:+28104818 | MsG0180001843.01.T01:CDS |
| GGTGGCCTTGCATACATCAT+TGG | 0.450507 | 1:+28104694 | MsG0180001843.01.T01:CDS |
| AAGGATCTGGAGGAGGATAA+GGG | 0.466318 | 1:+28104641 | MsG0180001843.01.T01:CDS |
| GGTCTACCGGCAGGCGGACG+AGG | 0.474962 | 1:+28104839 | MsG0180001843.01.T01:CDS |
| GAATAGAGAACAAAATAAAC+CGG | 0.490867 | 1:+28104044 | MsG0180001843.01.T01:CDS |
| ACAGCATATGAGTAAGGATC+TGG | 0.490921 | 1:+28104628 | MsG0180001843.01.T01:intron |
| GCCGGTAGACCTTGAACAGC+GGG | 0.491898 | 1:-28104827 | None:intergenic |
| AAGTATCCTCGTCCGCCTGC+CGG | 0.500903 | 1:-28104845 | None:intergenic |
| AGGCCCGCTGAGTATGCCAA+TGG | 0.503273 | 1:+28104742 | MsG0180001843.01.T01:CDS |
| CACGGCTAGAGAAAATGATA+AGG | 0.506200 | 1:-28104147 | None:intergenic |
| TCTGGAGGAGGATAAGGGTA+AGG | 0.506412 | 1:+28104646 | MsG0180001843.01.T01:CDS |
| CACCCATTGGCATACTCAGC+GGG | 0.516695 | 1:-28104745 | None:intergenic |
| GAGTATGCCAATGAACCAAA+TGG | 0.517292 | 1:+28104793 | MsG0180001843.01.T01:CDS |
| CTGAGTATGCCAATGGGTGG+TGG | 0.525067 | 1:+28104749 | MsG0180001843.01.T01:CDS |
| TCCCGCTGTTCAAGGTCTAC+CGG | 0.531013 | 1:+28104826 | MsG0180001843.01.T01:CDS |
| TCACTGACAGCATATGAGTA+AGG | 0.531418 | 1:+28104622 | MsG0180001843.01.T01:intron |
| ATGTAATTCACCTCAGGAGG+TGG | 0.534211 | 1:+28104676 | MsG0180001843.01.T01:CDS |
| TCCAGGCCCAGAAATGATGC+AGG | 0.539143 | 1:+28104878 | MsG0180001843.01.T01:CDS |
| ACGGCTAGAGAAAATGATAA+GGG | 0.547854 | 1:-28104146 | None:intergenic |
| GGAGGAGGATAAGGGTAAGG+AGG | 0.547967 | 1:+28104649 | MsG0180001843.01.T01:CDS |
| GATACTTTCAAGACTGGTCC+AGG | 0.548661 | 1:+28104861 | MsG0180001843.01.T01:CDS |
| TTATTACCTCCACCACCCAT+TGG | 0.551672 | 1:-28104758 | None:intergenic |
| GGCCCGCTGAGTATGCCAAT+GGG | 0.553274 | 1:+28104743 | MsG0180001843.01.T01:CDS |
| AGAGAACAAAATAAACCGGC+AGG | 0.560471 | 1:+28104048 | MsG0180001843.01.T01:CDS |
| GCTGTTCAAGGTCTACCGGC+AGG | 0.561063 | 1:+28104830 | MsG0180001843.01.T01:CDS |
| GACGAGGATACTTTCAAGAC+TGG | 0.561503 | 1:+28104855 | MsG0180001843.01.T01:CDS |
| GGATACATGTAATTCACCTC+AGG | 0.568572 | 1:+28104670 | MsG0180001843.01.T01:CDS |
| AGTATGCCAATGGGTGGTGG+AGG | 0.595369 | 1:+28104752 | MsG0180001843.01.T01:CDS |
| TATGAGTAAGGATCTGGAGG+AGG | 0.598025 | 1:+28104634 | MsG0180001843.01.T01:CDS |
| AGAAGCCAATGATGTATGCA+AGG | 0.603536 | 1:-28104699 | None:intergenic |
| AGTATGCCAATGAACCAAAT+GGG | 0.610690 | 1:+28104794 | MsG0180001843.01.T01:CDS |
| TGCCGGTAGACCTTGAACAG+CGG | 0.630038 | 1:-28104828 | None:intergenic |
| TACATGTAATTCACCTCAGG+AGG | 0.640426 | 1:+28104673 | MsG0180001843.01.T01:CDS |
| GTTCAAGGTCTACCGGCAGG+CGG | 0.643780 | 1:+28104833 | MsG0180001843.01.T01:CDS |
| GCATATGAGTAAGGATCTGG+AGG | 0.645765 | 1:+28104631 | MsG0180001843.01.T01:intron |
| TAAATTCATAGAGTTTGCCA+CGG | 0.652204 | 1:-28104165 | None:intergenic |
| CCACCCATTGGCATACTCAG+CGG | 0.654121 | 1:-28104746 | None:intergenic |
| GGTGGTGGAGGTAATAATGT+GGG | 0.662176 | 1:+28104764 | MsG0180001843.01.T01:CDS |
| CCAGGCCCAGAAATGATGCA+GGG | 0.671228 | 1:+28104879 | MsG0180001843.01.T01:CDS |
| GGGTGGTGGAGGTAATAATG+TGG | 0.672373 | 1:+28104763 | MsG0180001843.01.T01:CDS |
| CCGCTGAGTATGCCAATGGG+TGG | 0.673311 | 1:+28104746 | MsG0180001843.01.T01:CDS |
| GTATGCAAGGCCACCTCCTG+AGG | 0.686248 | 1:-28104686 | None:intergenic |
| ATGCCAATGAACCAAATGGG+TGG | 0.690349 | 1:+28104797 | MsG0180001843.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ACATAAAAATATTTTATATG+TGG | - | Chr1:28104357-28104376 | None:intergenic | 10.0% |
| !!! | TTTATATGTGGTTATATTTT+GGG | - | Chr1:28104345-28104364 | None:intergenic | 15.0% |
| !!! | TTTTATATGTGGTTATATTT+TGG | - | Chr1:28104346-28104365 | None:intergenic | 15.0% |
| !! | ATATTGCATAAAATTAGAGA+GGG | + | Chr1:28104509-28104528 | MsG0180001843.01.T01:intron | 20.0% |
| !! | TAAAAAACTCATGTTTCATT+GGG | + | Chr1:28104480-28104499 | MsG0180001843.01.T01:intron | 20.0% |
| !! | TATATTGCATAAAATTAGAG+AGG | + | Chr1:28104508-28104527 | MsG0180001843.01.T01:intron | 20.0% |
| !! | TTGAAACTTTAATATTGCTA+TGG | + | Chr1:28104261-28104280 | MsG0180001843.01.T01:intron | 20.0% |
| !!! | ACTATGTTTATTTTGTTCTT+TGG | - | Chr1:28104393-28104412 | None:intergenic | 20.0% |
| ! | ACTTTCTCAAAAAGAAGAAA+TGG | + | Chr1:28104073-28104092 | MsG0180001843.01.T01:CDS | 25.0% |
| ! | CTAAAAAACTCATGTTTCAT+TGG | + | Chr1:28104479-28104498 | MsG0180001843.01.T01:intron | 25.0% |
| ! | GAATAGAGAACAAAATAAAC+CGG | + | Chr1:28104044-28104063 | MsG0180001843.01.T01:CDS | 25.0% |
| ! | TGATTCATCAAAACAAACAA+TGG | - | Chr1:28104570-28104589 | None:intergenic | 25.0% |
| !! | CTCTATGAATTTAGAATTGT+TGG | + | Chr1:28104175-28104194 | MsG0180001843.01.T01:intron | 25.0% |
| !! | TATTTCTATAAAATCCTCTC+CGG | + | Chr1:28104425-28104444 | MsG0180001843.01.T01:intron | 25.0% |
| !!! | ATGAAAGCAATTTTTGAGAA+TGG | - | Chr1:28104300-28104319 | None:intergenic | 25.0% |
| !!! | TGAAAGCAATTTTTGAGAAT+GGG | - | Chr1:28104299-28104318 | None:intergenic | 25.0% |
| ATCAAAACAAACAATGGTCA+TGG | - | Chr1:28104564-28104583 | None:intergenic | 30.0% | |
| ATTTCTATAAAATCCTCTCC+GGG | + | Chr1:28104426-28104445 | MsG0180001843.01.T01:intron | 30.0% | |
| TAAATTCATAGAGTTTGCCA+CGG | - | Chr1:28104168-28104187 | None:intergenic | 30.0% | |
| ! | GAAATCTTTGATCATTTTCC+AGG | + | Chr1:28104722-28104741 | MsG0180001843.01.T01:CDS | 30.0% |
| !! | TTTTCTTTGATTTTGATCCC+CGG | - | Chr1:28104447-28104466 | None:intergenic | 30.0% |
| ACGGCTAGAGAAAATGATAA+GGG | - | Chr1:28104149-28104168 | None:intergenic | 35.0% | |
| AGTATGCCAATGAACCAAAT+GGG | + | Chr1:28104794-28104813 | MsG0180001843.01.T01:CDS | 35.0% | |
| CACAACTTATATATTGCAGC+TGG | + | Chr1:28104588-28104607 | MsG0180001843.01.T01:intron | 35.0% | |
| TGCATAAAATTAGAGAGGGT+AGG | + | Chr1:28104513-28104532 | MsG0180001843.01.T01:intron | 35.0% | |
| TTTCTATAAAATCCTCTCCG+GGG | + | Chr1:28104427-28104446 | MsG0180001843.01.T01:intron | 35.0% | |
| !! | TTTTTGAGAAAGTTACCTGC+CGG | - | Chr1:28104066-28104085 | None:intergenic | 35.0% |
| ACAAACAATGGTCATGGTGA+TGG | - | Chr1:28104558-28104577 | None:intergenic | 40.0% | |
| ACAGCATATGAGTAAGGATC+TGG | + | Chr1:28104628-28104647 | MsG0180001843.01.T01:intron | 40.0% | |
| AGAAGCCAATGATGTATGCA+AGG | - | Chr1:28104702-28104721 | None:intergenic | 40.0% | |
| AGAGAACAAAATAAACCGGC+AGG | + | Chr1:28104048-28104067 | MsG0180001843.01.T01:CDS | 40.0% | |
| CACGGCTAGAGAAAATGATA+AGG | - | Chr1:28104150-28104169 | None:intergenic | 40.0% | |
| GAGTATGCCAATGAACCAAA+TGG | + | Chr1:28104793-28104812 | MsG0180001843.01.T01:CDS | 40.0% | |
| GGATACATGTAATTCACCTC+AGG | + | Chr1:28104670-28104689 | MsG0180001843.01.T01:CDS | 40.0% | |
| TACATGTAATTCACCTCAGG+AGG | + | Chr1:28104673-28104692 | MsG0180001843.01.T01:CDS | 40.0% | |
| TCACTGACAGCATATGAGTA+AGG | + | Chr1:28104622-28104641 | MsG0180001843.01.T01:intron | 40.0% | |
| TGGTTCATTGGCATACTCAT+TGG | - | Chr1:28104791-28104810 | None:intergenic | 40.0% | |
| ! | CTTATCATTTTCTCTAGCCG+TGG | + | Chr1:28104148-28104167 | MsG0180001843.01.T01:CDS | 40.0% |
| ! | TTACCACCCATTTGGTTCAT+TGG | - | Chr1:28104803-28104822 | None:intergenic | 40.0% |
| AAGGATCTGGAGGAGGATAA+GGG | + | Chr1:28104641-28104660 | MsG0180001843.01.T01:CDS | 45.0% | |
| ATGCCAATGAACCAAATGGG+TGG | + | Chr1:28104797-28104816 | MsG0180001843.01.T01:CDS | 45.0% | |
| ATGTAATTCACCTCAGGAGG+TGG | + | Chr1:28104676-28104695 | MsG0180001843.01.T01:CDS | 45.0% | |
| GACGAGGATACTTTCAAGAC+TGG | + | Chr1:28104855-28104874 | MsG0180001843.01.T01:CDS | 45.0% | |
| GCATATGAGTAAGGATCTGG+AGG | + | Chr1:28104631-28104650 | MsG0180001843.01.T01:intron | 45.0% | |
| TAAGGATCTGGAGGAGGATA+AGG | + | Chr1:28104640-28104659 | MsG0180001843.01.T01:CDS | 45.0% | |
| TATGAGTAAGGATCTGGAGG+AGG | + | Chr1:28104634-28104653 | MsG0180001843.01.T01:CDS | 45.0% | |
| TTATTACCTCCACCACCCAT+TGG | - | Chr1:28104761-28104780 | None:intergenic | 45.0% | |
| ! | GATACTTTCAAGACTGGTCC+AGG | + | Chr1:28104861-28104880 | MsG0180001843.01.T01:CDS | 45.0% |
| !! | GGTGGTGGAGGTAATAATGT+GGG | + | Chr1:28104764-28104783 | MsG0180001843.01.T01:CDS | 45.0% |
| !! | TTTGATTTTGATCCCCGGAG+AGG | - | Chr1:28104442-28104461 | None:intergenic | 45.0% |
| CGGGAATGTTACCACCCATT+TGG | - | Chr1:28104811-28104830 | None:intergenic | 50.0% | |
| GGTAACATTCCCGCTGTTCA+AGG | + | Chr1:28104818-28104837 | MsG0180001843.01.T01:CDS | 50.0% | |
| TCTGGAGGAGGATAAGGGTA+AGG | + | Chr1:28104646-28104665 | MsG0180001843.01.T01:CDS | 50.0% | |
| ! | GGTGGCCTTGCATACATCAT+TGG | + | Chr1:28104694-28104713 | MsG0180001843.01.T01:CDS | 50.0% |
| !! | GGGTGGTGGAGGTAATAATG+TGG | + | Chr1:28104763-28104782 | MsG0180001843.01.T01:CDS | 50.0% |
| CACCCATTGGCATACTCAGC+GGG | - | Chr1:28104748-28104767 | None:intergenic | 55.0% | |
| CCACCCATTGGCATACTCAG+CGG | - | Chr1:28104749-28104768 | None:intergenic | 55.0% | |
| CCAGGCCCAGAAATGATGCA+GGG | + | Chr1:28104879-28104898 | MsG0180001843.01.T01:CDS | 55.0% | |
| CTGAGTATGCCAATGGGTGG+TGG | + | Chr1:28104749-28104768 | MsG0180001843.01.T01:CDS | 55.0% | |
| GGAGGAGGATAAGGGTAAGG+AGG | + | Chr1:28104649-28104668 | MsG0180001843.01.T01:CDS | 55.0% | |
| TCCAGGCCCAGAAATGATGC+AGG | + | Chr1:28104878-28104897 | MsG0180001843.01.T01:CDS | 55.0% | |
| TCCCGCTGTTCAAGGTCTAC+CGG | + | Chr1:28104826-28104845 | MsG0180001843.01.T01:CDS | 55.0% | |
| TGCCGGTAGACCTTGAACAG+CGG | - | Chr1:28104831-28104850 | None:intergenic | 55.0% | |
| ! | AGTATGCCAATGGGTGGTGG+AGG | + | Chr1:28104752-28104771 | MsG0180001843.01.T01:CDS | 55.0% |
| AAGTATCCTCGTCCGCCTGC+CGG | - | Chr1:28104848-28104867 | None:intergenic | 60.0% | |
| AGGCCCGCTGAGTATGCCAA+TGG | + | Chr1:28104742-28104761 | MsG0180001843.01.T01:CDS | 60.0% | |
| ATTGGCATACTCAGCGGGCC+TGG | - | Chr1:28104743-28104762 | None:intergenic | 60.0% | |
| CCGCTGAGTATGCCAATGGG+TGG | + | Chr1:28104746-28104765 | MsG0180001843.01.T01:CDS | 60.0% | |
| GCCGGTAGACCTTGAACAGC+GGG | - | Chr1:28104830-28104849 | None:intergenic | 60.0% | |
| GCTGTTCAAGGTCTACCGGC+AGG | + | Chr1:28104830-28104849 | MsG0180001843.01.T01:CDS | 60.0% | |
| GGCCCGCTGAGTATGCCAAT+GGG | + | Chr1:28104743-28104762 | MsG0180001843.01.T01:CDS | 60.0% | |
| GTATGCAAGGCCACCTCCTG+AGG | - | Chr1:28104689-28104708 | None:intergenic | 60.0% | |
| GTTCAAGGTCTACCGGCAGG+CGG | + | Chr1:28104833-28104852 | MsG0180001843.01.T01:CDS | 60.0% | |
| ! | CCCTGCATCATTTCTGGGCC+TGG | - | Chr1:28104882-28104901 | None:intergenic | 60.0% |
| GGTCTACCGGCAGGCGGACG+AGG | + | Chr1:28104839-28104858 | MsG0180001843.01.T01:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 28104016 | 28104904 | 28104016 | ID=MsG0180001843.01;Name=MsG0180001843.01 |
| Chr1 | mRNA | 28104016 | 28104904 | 28104016 | ID=MsG0180001843.01.T01;Parent=MsG0180001843.01;Name=MsG0180001843.01.T01;_AED=0.80;_eAED=0.80;_QI=0|0|0|0.5|0|0|2|0|149 |
| Chr1 | exon | 28104016 | 28104192 | 28104016 | ID=MsG0180001843.01.T01:exon:41766;Parent=MsG0180001843.01.T01 |
| Chr1 | exon | 28104632 | 28104904 | 28104632 | ID=MsG0180001843.01.T01:exon:41767;Parent=MsG0180001843.01.T01 |
| Chr1 | CDS | 28104016 | 28104192 | 28104016 | ID=MsG0180001843.01.T01:cds;Parent=MsG0180001843.01.T01 |
| Chr1 | CDS | 28104632 | 28104904 | 28104632 | ID=MsG0180001843.01.T01:cds;Parent=MsG0180001843.01.T01 |
| Gene Sequence |
| Protein sequence |
