AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180001999.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180001999.01.T01 MTR_1g047550 93.578 109 7 0 39 147 1 109 1.09e-70 215
MsG0180001999.01.T01 MTR_8g079502 86.239 109 15 0 39 147 1 109 2.34e-63 196
MsG0180001999.01.T01 MTR_4g131030 71.429 126 19 1 39 147 1 126 1.19e-57 183
MsG0180001999.01.T01 MTR_1g063160 75.229 109 27 0 39 147 1 109 7.98e-53 169
MsG0180001999.01.T01 MTR_1g054265 73.394 109 29 0 39 147 1 109 2.07e-50 163
MsG0180001999.01.T01 MTR_2g014120 96.053 76 3 0 180 255 37 112 3.05e-46 154
MsG0180001999.01.T01 MTR_7g108540 96.053 76 3 0 180 255 37 112 3.12e-46 154
MsG0180001999.01.T01 MTR_8g051580 60.185 108 43 0 39 146 1 108 1.09e-40 138
MsG0180001999.01.T01 MTR_8g046350 59.633 109 41 1 39 147 1 106 8.66e-40 135
MsG0180001999.01.T01 MTR_4g094632 41.135 141 73 3 39 178 1 132 6.92e-26 99.8
MsG0180001999.01.T01 MTR_1g106070 41.525 118 65 2 41 154 10 127 4.86e-23 92.8
MsG0180001999.01.T01 MTR_3g052870 60.294 68 27 0 41 108 10 77 4.96e-22 91.3
MsG0180001999.01.T01 MTR_4g094638 45.794 107 55 2 39 142 1 107 6.66e-22 89.7
MsG0180001999.01.T01 MTR_3g080940 43.243 111 60 2 41 149 10 119 9.70e-22 90.1
MsG0180001999.01.T01 MTR_1g105920 46.000 100 52 1 41 138 10 109 1.21e-21 90.5
MsG0180001999.01.T01 MTR_1g077360 41.739 115 61 2 34 146 3 113 1.25e-21 90.5
MsG0180001999.01.T01 MTR_5g045560 53.333 75 35 0 34 108 3 77 1.85e-21 90.1
MsG0180001999.01.T01 MTR_3g052920 57.353 68 29 0 41 108 10 77 3.21e-21 89.4
MsG0180001999.01.T01 MTR_3g030780 39.683 126 70 3 34 154 3 127 5.29e-21 86.3
MsG0180001999.01.T01 MTR_2g105290 42.424 99 55 1 39 137 11 107 7.99e-21 87.0
MsG0180001999.01.T01 MTR_2g030740 54.667 75 34 0 34 108 3 77 8.51e-21 88.2
MsG0180001999.01.T01 MTR_1g105910 44.037 109 58 2 41 147 10 117 8.87e-21 88.2
MsG0180001999.01.T01 MTR_0121s0080 42.623 122 65 3 42 159 11 131 9.17e-21 88.2
MsG0180001999.01.T01 MTR_1g012570 43.119 109 59 2 41 147 10 117 1.30e-20 87.8
MsG0180001999.01.T01 MTR_8g043650 57.353 68 29 0 41 108 10 77 2.41e-20 87.0
MsG0180001999.01.T01 MTR_5g053390 51.948 77 37 0 34 110 3 79 4.24e-20 86.7
MsG0180001999.01.T01 MTR_1g075600 53.947 76 32 1 35 110 7 79 6.47e-20 85.9
MsG0180001999.01.T01 MTR_3g030770 55.882 68 30 0 41 108 10 77 7.53e-20 85.5
MsG0180001999.01.T01 MTR_1g108510 55.882 68 30 0 41 108 10 77 8.70e-20 85.5
MsG0180001999.01.T01 MTR_7g028448 53.846 65 30 0 54 118 26 90 9.91e-20 84.0
MsG0180001999.01.T01 MTR_4g036915 53.846 65 30 0 54 118 26 90 9.91e-20 84.0
MsG0180001999.01.T01 MTR_8g086290 43.000 100 52 2 26 123 1 97 2.32e-19 83.2
MsG0180001999.01.T01 MTR_0121s0100 54.412 68 31 0 41 108 10 77 5.02e-19 80.9
MsG0180001999.01.T01 MTR_5g055100 45.783 83 45 0 34 116 3 85 1.53e-18 82.4
MsG0180001999.01.T01 MTR_1g108580 52.941 68 32 0 41 108 10 77 1.93e-18 81.6
MsG0180001999.01.T01 MTR_2g093190 54.412 68 31 0 41 108 10 77 2.37e-18 81.6
MsG0180001999.01.T01 MTR_2g085250 52.941 68 32 0 41 108 10 77 2.98e-18 81.6
MsG0180001999.01.T01 MTR_2g085280 52.941 68 32 0 41 108 10 77 3.10e-18 81.3
MsG0180001999.01.T01 MTR_1g105905 63.636 55 20 0 56 110 8 62 6.71e-18 80.1
MsG0180001999.01.T01 MTR_7g062350 36.913 149 74 4 56 194 37 175 1.53e-16 77.0
MsG0180001999.01.T01 MTR_5g066180 32.105 190 98 6 39 223 1 164 1.59e-16 76.6
MsG0180001999.01.T01 MTR_7g075870 39.423 104 60 1 39 142 1 101 2.17e-16 75.9
MsG0180001999.01.T01 MTR_0003s0590 48.101 79 40 1 39 117 1 78 2.98e-16 76.3
MsG0180001999.01.T01 MTR_5g021270 50.000 62 31 0 39 100 1 62 4.54e-16 75.5
MsG0180001999.01.T01 MTR_5g021270 50.000 62 31 0 39 100 1 62 4.71e-16 75.5
MsG0180001999.01.T01 MTR_2g017865 33.600 125 79 1 24 144 1 125 1.40e-15 74.7
MsG0180001999.01.T01 MTR_4g127140 50.000 64 32 0 55 118 27 90 1.58e-15 72.8
MsG0180001999.01.T01 MTR_8g087860 40.196 102 58 1 41 142 19 117 2.71e-15 73.6
MsG0180001999.01.T01 MTR_7g075870 39.048 105 60 2 39 142 1 102 5.61e-15 72.0
MsG0180001999.01.T01 MTR_8g033220 53.226 62 29 0 39 100 1 62 6.91e-15 72.0
MsG0180001999.01.T01 MTR_3g067875 60.417 48 19 0 56 103 8 55 7.47e-15 67.8
MsG0180001999.01.T01 MTR_8g033220 53.226 62 29 0 39 100 1 62 7.80e-15 72.0
MsG0180001999.01.T01 MTR_3g452380 46.988 83 40 1 29 107 2 84 1.02e-14 72.0
MsG0180001999.01.T01 MTR_4g102530 46.377 69 37 0 39 107 1 69 1.28e-14 70.9
MsG0180001999.01.T01 MTR_1g053070 47.826 69 36 0 39 107 1 69 1.85e-14 71.2
MsG0180001999.01.T01 MTR_1g108500 41.304 92 35 1 56 147 113 185 1.94e-14 72.0
MsG0180001999.01.T01 MTR_4g093970 42.500 80 45 1 28 106 15 94 4.18e-14 70.1
MsG0180001999.01.T01 MTR_3g067910 52.727 55 26 0 56 110 6 60 1.01e-13 66.2
MsG0180001999.01.T01 MTR_5g032150 28.877 187 109 6 39 222 1 166 1.15e-13 68.6
MsG0180001999.01.T01 MTR_8g033270 47.826 69 36 0 39 107 1 69 1.26e-13 68.9
MsG0180001999.01.T01 MTR_3g005530 46.377 69 37 0 39 107 1 69 1.39e-13 68.6
MsG0180001999.01.T01 MTR_3g113030 48.387 62 32 0 39 100 1 62 1.59e-13 68.2
MsG0180001999.01.T01 MTR_5g066960 51.724 58 28 0 39 96 1 58 2.62e-13 63.5
MsG0180001999.01.T01 MTR_2g009890 42.353 85 48 1 39 123 1 84 4.95e-13 67.8
MsG0180001999.01.T01 MTR_5g032520 37.755 98 48 2 39 135 1 86 6.45e-13 66.6
MsG0180001999.01.T01 MTR_1g041615 65.909 44 15 0 53 96 19 62 1.25e-12 63.9
MsG0180001999.01.T01 MTR_2g461710 50.820 61 25 1 35 95 2 57 1.48e-12 61.6
MsG0180001999.01.T01 MTR_1g101970 45.070 71 39 0 39 109 1 71 1.49e-12 64.7
MsG0180001999.01.T01 MTR_4g036050 47.541 61 32 0 39 99 1 61 1.57e-12 64.3
MsG0180001999.01.T01 MTR_4g036050 46.774 62 33 0 39 100 1 62 1.79e-12 64.7
MsG0180001999.01.T01 MTR_4g036050 46.774 62 33 0 39 100 1 62 1.82e-12 64.7
MsG0180001999.01.T01 MTR_4g036050 46.774 62 33 0 39 100 1 62 2.03e-12 64.7
MsG0180001999.01.T01 MTR_3g088615 30.065 153 85 5 39 188 1 134 2.27e-12 64.3
MsG0180001999.01.T01 MTR_7g016630 36.364 88 50 2 39 120 1 88 3.06e-12 65.1
MsG0180001999.01.T01 MTR_4g084740 44.444 81 41 2 39 115 1 81 4.95e-12 65.1
MsG0180001999.01.T01 MTR_3g102570 32.479 117 63 2 39 154 1 102 5.52e-12 65.1
MsG0180001999.01.T01 MTR_5g046870 50.877 57 28 0 39 95 1 57 5.90e-12 61.6
MsG0180001999.01.T01 MTR_5g031000 43.836 73 36 1 35 107 2 69 6.12e-12 63.9
MsG0180001999.01.T01 MTR_5g031000 43.836 73 36 1 35 107 2 69 6.79e-12 63.5
MsG0180001999.01.T01 MTR_1g038300 43.662 71 38 1 39 107 1 71 8.17e-12 63.5
MsG0180001999.01.T01 MTR_4g093030 50.000 62 26 1 35 96 2 58 1.31e-11 61.6
MsG0180001999.01.T01 MTR_5g046790 46.552 58 31 0 39 96 1 58 1.49e-11 62.4
MsG0180001999.01.T01 MTR_1g029670 28.800 125 80 3 39 158 1 121 1.62e-11 62.0
MsG0180001999.01.T01 MTR_7g016600 50.877 57 28 0 39 95 1 57 2.22e-11 62.4
MsG0180001999.01.T01 MTR_3g084980 38.947 95 53 1 39 133 1 90 2.28e-11 62.4
MsG0180001999.01.T01 MTR_7g075850 33.913 115 74 1 39 153 1 113 2.59e-11 62.4
MsG0180001999.01.T01 MTR_3g109930 42.857 63 36 0 49 111 11 73 3.61e-11 60.8
MsG0180001999.01.T01 MTR_4g109830 40.000 70 41 1 39 107 1 70 3.80e-11 61.6
MsG0180001999.01.T01 MTR_8g097090 50.877 57 28 0 39 95 1 57 4.76e-11 61.6
MsG0180001999.01.T01 MTR_6g015975 50.877 57 28 0 39 95 1 57 5.91e-11 61.2
MsG0180001999.01.T01 MTR_4g109810 48.276 58 30 0 39 96 1 58 8.52e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180001999.01.T01 AT2G27490 68.421 76 24 0 180 255 37 112 1.76e-31 116
MsG0180001999.01.T01 AT2G27490 68.421 76 24 0 180 255 37 112 1.76e-31 116
MsG0180001999.01.T01 AT2G27490 68.421 76 24 0 180 255 37 112 1.76e-31 116
MsG0180001999.01.T01 AT2G27490 68.421 76 24 0 180 255 37 112 1.76e-31 116
MsG0180001999.01.T01 AT2G34440 51.818 110 51 2 39 147 1 109 8.00e-31 113
MsG0180001999.01.T01 AT3G66656 47.368 114 55 1 39 147 1 114 5.89e-28 105
MsG0180001999.01.T01 AT2G24840 44.144 111 54 2 41 147 64 170 4.55e-25 100
MsG0180001999.01.T01 AT5G60440 45.299 117 59 2 41 153 8 123 3.91e-22 93.2
MsG0180001999.01.T01 AT1G01530 41.584 101 59 0 41 141 8 108 1.12e-18 82.8
MsG0180001999.01.T01 AT2G45660 37.391 115 69 1 39 153 1 112 5.10e-18 79.0
MsG0180001999.01.T01 AT2G45660 37.391 115 69 1 39 153 1 112 2.11e-17 78.6
MsG0180001999.01.T01 AT5G13790 38.298 141 69 3 39 178 1 124 3.25e-17 79.3
MsG0180001999.01.T01 AT4G22950 50.725 69 34 0 39 107 1 69 7.69e-17 76.3
MsG0180001999.01.T01 AT5G62165 37.963 108 56 2 39 142 1 101 7.76e-17 75.9
MsG0180001999.01.T01 AT5G62165 37.963 108 56 2 39 142 1 101 7.76e-17 75.9
MsG0180001999.01.T01 AT5G62165 37.963 108 56 2 39 142 1 101 7.76e-17 75.9
MsG0180001999.01.T01 AT5G62165 37.963 108 56 2 39 142 1 101 7.76e-17 75.9
MsG0180001999.01.T01 AT5G62165 37.963 108 56 2 39 142 1 101 7.76e-17 75.9
MsG0180001999.01.T01 AT5G62165 37.963 108 56 2 39 142 1 101 9.43e-17 75.5
MsG0180001999.01.T01 AT5G62165 37.963 108 56 2 39 142 1 101 9.43e-17 75.5
MsG0180001999.01.T01 AT5G62165 37.963 108 56 2 39 142 1 101 9.43e-17 75.5
MsG0180001999.01.T01 AT1G65360 34.579 107 70 0 41 147 8 114 1.38e-16 76.6
MsG0180001999.01.T01 AT1G47760 37.719 114 52 3 39 152 1 95 1.45e-16 75.9
MsG0180001999.01.T01 AT3G57230 44.565 92 43 2 39 129 1 85 2.52e-16 74.3
MsG0180001999.01.T01 AT5G62165 44.048 84 43 1 39 118 1 84 2.65e-16 73.2
MsG0180001999.01.T01 AT4G36590 41.414 99 45 2 41 137 8 95 2.73e-16 76.3
MsG0180001999.01.T01 AT1G72350 55.714 70 29 1 41 110 44 111 3.30e-16 75.9
MsG0180001999.01.T01 AT5G51870 47.887 71 37 0 37 107 9 79 4.12e-16 75.5
MsG0180001999.01.T01 AT5G62165 36.220 127 62 3 39 161 1 112 5.00e-16 74.7
MsG0180001999.01.T01 AT5G62165 36.220 127 62 3 39 161 1 112 5.00e-16 74.7
MsG0180001999.01.T01 AT5G51860 43.373 83 47 0 39 121 1 83 5.00e-16 74.7
MsG0180001999.01.T01 AT5G62165 37.963 108 56 2 39 142 1 101 5.17e-16 74.7
MsG0180001999.01.T01 AT5G62165 37.963 108 56 2 39 142 1 101 5.17e-16 74.7
MsG0180001999.01.T01 AT5G62165 37.963 108 56 2 39 142 1 101 5.17e-16 74.7
MsG0180001999.01.T01 AT5G51860 43.373 83 47 0 39 121 1 83 5.53e-16 74.7
MsG0180001999.01.T01 AT5G51870 47.826 69 36 0 39 107 1 69 5.89e-16 73.9
MsG0180001999.01.T01 AT4G22950 50.725 69 34 0 39 107 1 69 6.35e-16 74.7
MsG0180001999.01.T01 AT4G22950 50.725 69 34 0 39 107 1 69 6.35e-16 74.7
MsG0180001999.01.T01 AT4G09960 27.149 221 133 5 22 226 3 211 8.85e-16 75.1
MsG0180001999.01.T01 AT5G51870 47.826 69 36 0 39 107 1 69 1.02e-15 73.9
MsG0180001999.01.T01 AT5G51870 47.826 69 36 0 39 107 24 92 1.24e-15 73.6
MsG0180001999.01.T01 AT4G09960 28.272 191 114 4 39 226 1 171 1.25e-15 73.9
MsG0180001999.01.T01 AT4G11880 41.228 114 61 3 39 146 1 114 1.31e-15 73.2
MsG0180001999.01.T01 AT4G11880 41.228 114 61 3 39 146 1 114 1.31e-15 73.2
MsG0180001999.01.T01 AT4G09960 27.273 198 123 4 38 226 1 186 1.39e-15 73.9
MsG0180001999.01.T01 AT4G09960 27.136 199 124 4 37 226 9 195 1.41e-15 74.3
MsG0180001999.01.T01 AT3G57230 44.565 92 43 2 39 129 1 85 1.65e-15 73.9
MsG0180001999.01.T01 AT3G57230 44.565 92 43 2 39 129 1 85 1.65e-15 73.9
MsG0180001999.01.T01 AT4G09960 27.411 197 122 4 39 226 1 185 2.19e-15 73.6
MsG0180001999.01.T01 AT5G51870 47.826 69 36 0 39 107 1 69 2.20e-15 73.2
MsG0180001999.01.T01 AT4G09960 27.650 217 130 6 21 227 86 285 2.89e-15 74.7
MsG0180001999.01.T01 AT5G13790 37.589 141 67 4 39 178 1 121 2.94e-15 73.9
MsG0180001999.01.T01 AT3G61120 49.275 69 35 0 39 107 1 69 3.20e-15 73.2
MsG0180001999.01.T01 AT3G57390 49.275 69 35 0 39 107 1 69 4.40e-15 72.8
MsG0180001999.01.T01 AT1G17310 37.415 147 73 6 55 185 63 206 5.40e-15 72.4
MsG0180001999.01.T01 AT3G04100 41.860 86 39 1 41 126 15 89 5.42e-15 72.0
MsG0180001999.01.T01 AT3G57390 49.275 69 35 0 39 107 1 69 7.79e-15 72.4
MsG0180001999.01.T01 AT1G17310 37.415 147 73 6 55 185 74 217 9.41e-15 71.6
MsG0180001999.01.T01 AT3G58780 31.522 184 106 4 13 184 1 176 9.93e-15 72.0
MsG0180001999.01.T01 AT4G11880 41.228 114 61 3 39 146 1 114 1.11e-14 71.6
MsG0180001999.01.T01 AT4G11880 41.228 114 61 3 39 146 1 114 1.11e-14 71.6
MsG0180001999.01.T01 AT3G58780 33.974 156 88 3 41 184 18 170 1.20e-14 71.6
MsG0180001999.01.T01 AT2G42830 32.692 156 90 3 41 184 18 170 2.23e-14 70.9
MsG0180001999.01.T01 AT3G58780 39.423 104 60 1 41 144 18 118 2.40e-14 71.6
MsG0180001999.01.T01 AT2G42830 32.692 156 90 3 41 184 18 170 2.41e-14 70.9
MsG0180001999.01.T01 AT2G45650 47.826 69 36 0 39 107 1 69 3.00e-14 70.9
MsG0180001999.01.T01 AT4G18960 39.604 101 54 2 17 117 2 95 4.46e-14 70.5
MsG0180001999.01.T01 AT2G22630 53.226 62 29 0 39 100 1 62 4.46e-14 69.7
MsG0180001999.01.T01 AT2G22630 53.226 62 29 0 39 100 1 62 4.46e-14 69.7
MsG0180001999.01.T01 AT5G65070 44.156 77 41 1 39 113 1 77 5.20e-14 67.8
MsG0180001999.01.T01 AT5G65070 32.692 156 76 4 39 179 1 142 6.83e-14 68.9
MsG0180001999.01.T01 AT3G54340 46.774 62 33 0 39 100 1 62 8.30e-14 69.3
MsG0180001999.01.T01 AT4G24540 36.842 95 59 1 39 133 1 94 8.43e-14 68.9
MsG0180001999.01.T01 AT1G71692 50.000 62 31 0 39 100 1 62 1.07e-13 68.6
MsG0180001999.01.T01 AT2G22540 39.175 97 48 1 39 135 1 86 1.75e-13 68.6
MsG0180001999.01.T01 AT2G22540 39.175 97 48 1 39 135 1 86 1.75e-13 68.6
MsG0180001999.01.T01 AT4G37940 47.826 69 36 0 39 107 1 69 1.75e-13 67.0
MsG0180001999.01.T01 AT1G29962 43.056 72 41 0 41 112 9 80 1.85e-13 67.4
MsG0180001999.01.T01 AT4G37940 47.826 69 36 0 39 107 1 69 2.02e-13 68.2
MsG0180001999.01.T01 AT1G77980 49.296 71 35 1 39 108 1 71 2.18e-13 69.3
MsG0180001999.01.T01 AT4G37940 47.826 69 36 0 39 107 1 69 2.22e-13 67.8
MsG0180001999.01.T01 AT3G30260 38.732 142 71 6 35 168 2 135 2.99e-13 67.8
MsG0180001999.01.T01 AT5G65070 44.156 77 41 1 39 113 1 77 4.20e-13 67.0
MsG0180001999.01.T01 AT5G65070 44.156 77 41 1 39 113 1 77 4.52e-13 67.0
MsG0180001999.01.T01 AT5G10140 39.000 100 55 3 39 133 1 99 4.96e-13 65.9
MsG0180001999.01.T01 AT3G58780 43.529 85 35 1 41 112 18 102 4.99e-13 67.0
MsG0180001999.01.T01 AT1G22130 58.491 53 22 0 39 91 1 53 5.21e-13 68.2
MsG0180001999.01.T01 AT1G24260 30.909 165 101 3 39 203 1 152 5.41e-13 67.4
MsG0180001999.01.T01 AT1G28460 44.118 68 38 0 41 108 9 76 5.59e-13 65.9
MsG0180001999.01.T01 AT1G24260 30.909 165 101 3 39 203 1 152 5.90e-13 67.0
MsG0180001999.01.T01 AT5G10140 39.000 100 55 3 39 133 1 99 7.71e-13 65.9
MsG0180001999.01.T01 AT5G10140 42.857 77 41 2 39 113 1 76 1.11e-12 65.1
MsG0180001999.01.T01 AT5G20240 43.939 66 37 0 39 104 1 66 1.24e-12 64.3
MsG0180001999.01.T01 AT2G22540 58.000 50 21 0 39 88 1 50 1.33e-12 65.9
MsG0180001999.01.T01 AT1G46408 46.575 73 35 1 40 108 4 76 1.49e-12 66.2
MsG0180001999.01.T01 AT5G10140 42.857 77 41 2 39 113 1 76 1.51e-12 65.1
MsG0180001999.01.T01 AT5G65070 47.692 65 32 1 39 101 1 65 1.79e-12 65.5
MsG0180001999.01.T01 AT1G77950 46.479 71 37 1 39 108 1 71 2.27e-12 65.5
MsG0180001999.01.T01 AT1G77950 46.479 71 37 1 39 108 1 71 2.27e-12 65.5
MsG0180001999.01.T01 AT1G77950 46.479 71 37 1 39 108 1 71 2.27e-12 65.5
MsG0180001999.01.T01 AT1G77950 46.479 71 37 1 39 108 1 71 2.27e-12 65.5
MsG0180001999.01.T01 AT3G58780 54.386 57 26 0 41 97 18 74 4.08e-12 65.1
MsG0180001999.01.T01 AT5G20240 43.939 66 37 0 39 104 1 66 4.35e-12 63.9
MsG0180001999.01.T01 AT2G14210 50.000 62 26 1 35 96 2 58 6.34e-12 63.9
MsG0180001999.01.T01 AT2G14210 50.000 62 26 1 35 96 2 58 7.15e-12 63.9
MsG0180001999.01.T01 AT5G65080 41.558 77 43 1 39 113 8 84 1.31e-11 62.4
MsG0180001999.01.T01 AT1G24260 37.864 103 55 2 39 141 1 94 2.35e-11 62.4
MsG0180001999.01.T01 AT2G03710 50.877 57 28 0 39 95 1 57 2.39e-11 61.6
MsG0180001999.01.T01 AT5G15800 50.877 57 28 0 39 95 1 57 2.97e-11 62.4
MsG0180001999.01.T01 AT5G15800 50.877 57 28 0 39 95 1 57 3.84e-11 62.0
MsG0180001999.01.T01 AT1G26310 36.957 92 52 2 39 124 1 92 4.81e-11 61.6
MsG0180001999.01.T01 AT2G03710 50.877 57 28 0 39 95 1 57 6.80e-11 61.2
MsG0180001999.01.T01 AT2G03710 50.877 57 28 0 39 95 1 57 7.00e-11 61.2
MsG0180001999.01.T01 AT3G02310 49.123 57 29 0 39 95 1 57 7.03e-11 60.5
MsG0180001999.01.T01 AT3G02310 49.123 57 29 0 39 95 1 57 7.73e-11 61.2

Find 61 sgRNAs with CRISPR-Local

Find 274 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATATATCCTCGGGGATCTTT+TGG 0.249734 1:+30768259 MsG0180001999.01.T01:CDS
AACTGAGTTTCCATGGGATA+TGG 0.258693 1:+30763762 MsG0180001999.01.T01:CDS
AACGTTATTCTCATTGGAAT+TGG 0.310804 1:+30766149 MsG0180001999.01.T01:CDS
TGATGGTTGCTTTAGATTGT+TGG 0.313955 1:+30768230 MsG0180001999.01.T01:intron
GGTGACAGACCTTACTCTTT+TGG 0.315150 1:+30764523 MsG0180001999.01.T01:CDS
GTTCAAAACGTTATTCTCAT+TGG 0.332133 1:+30766143 MsG0180001999.01.T01:CDS
CGCTTGCATCAGTCTCTTGT+TGG 0.342002 1:-30764582 None:intergenic
TTGAGAAATTGATGCCTATC+AGG 0.358507 1:-30768129 None:intergenic
GACTTCTGCTCCGCACAAAA+TGG 0.371305 1:-30764479 None:intergenic
CATTAGAAGATGGGTTTCCT+TGG 0.387460 1:-30764609 None:intergenic
AAGATCCCCGAGGATATATA+AGG 0.397948 1:-30768255 None:intergenic
ACCAACATACTTAAGGTGAT+TGG 0.413796 1:+30763733 MsG0180001999.01.T01:CDS
AGTCTCTTGTTGGAGATACT+TGG 0.434895 1:-30764572 None:intergenic
ACATTCTCAAAGCGTCGAAC+AGG 0.435666 1:+30764430 MsG0180001999.01.T01:CDS
CTTAAGTATGTTGGTTTCCA+AGG 0.439044 1:-30763725 None:intergenic
TTGGCTCCTTATATATCCTC+GGG 0.445067 1:+30768249 MsG0180001999.01.T01:CDS
ATTAGAAGATGGGTTTCCTT+GGG 0.457016 1:-30764608 None:intergenic
TACAAGGTCATTGTTATTTG+AGG 0.457738 1:+30768309 MsG0180001999.01.T01:CDS
TAGGAGGTGTTGCGTGAAGC+AGG 0.459893 1:+30764340 MsG0180001999.01.T01:intron
ATCTTGGGAGCATTAGAAGA+TGG 0.462018 1:-30764619 None:intergenic
GTTATGTAACTGAGTTTCCA+TGG 0.465242 1:+30763755 MsG0180001999.01.T01:CDS
ACTGAGTTTCCATGGGATAT+GGG 0.466044 1:+30763763 MsG0180001999.01.T01:CDS
GTTGGCTCCTTATATATCCT+CGG 0.468349 1:+30768248 MsG0180001999.01.T01:CDS
CTTGGAAACCAACATACTTA+AGG 0.478172 1:+30763726 MsG0180001999.01.T01:CDS
ATAGGCATCAATTTCTCAAT+CGG 0.484916 1:+30768133 MsG0180001999.01.T01:CDS
ACCAATCACCTTAAGTATGT+TGG 0.487190 1:-30763734 None:intergenic
AATGTAACTTGCCTCGTGTT+GGG 0.491629 1:-30764412 None:intergenic
TACCAGGAGGCGTTGAAGAA+AGG 0.501530 1:+30768003 MsG0180001999.01.T01:intron
CCTGGATGGCCAAAAGAGTA+AGG 0.507377 1:-30764532 None:intergenic
ATCTTCTAATGCTCCCAAGA+TGG 0.515526 1:+30764621 MsG0180001999.01.T01:CDS
GTTGTGAAGCTGTGGTCAAA+AGG 0.519512 1:+30768285 MsG0180001999.01.T01:CDS
TCTTGGGAGCATTAGAAGAT+GGG 0.519973 1:-30764618 None:intergenic
GTATGTTGGTTTCCAAGGCA+TGG 0.522681 1:-30763720 None:intergenic
CGGATGTAGAAGCCATGCCT+TGG 0.523723 1:+30763708 MsG0180001999.01.T01:CDS
TGAAGAAAGGAAGTGGTGGA+TGG 0.544902 1:+30768016 MsG0180001999.01.T01:CDS
TGAAGCAGGTGAAGGAATCA+TGG 0.546790 1:+30764354 MsG0180001999.01.T01:CDS
AGTTGTTGAAGCATTTGGGG+AGG 0.547243 1:+30768044 MsG0180001999.01.T01:CDS
AAAAGAGTAAGGTCTGTCAC+CGG 0.568313 1:-30764521 None:intergenic
TTATGTAACTGAGTTTCCAT+GGG 0.575394 1:+30763756 MsG0180001999.01.T01:CDS
GAATGTAACTTGCCTCGTGT+TGG 0.578413 1:-30764413 None:intergenic
GCTATTGTTATGTTCTCTCC+CGG 0.579155 1:+30764502 MsG0180001999.01.T01:CDS
AAAGAGTAAGGTCTGTCACC+GGG 0.580939 1:-30764520 None:intergenic
GAGGCGTTGAAGAAAGGAAG+TGG 0.583822 1:+30768009 MsG0180001999.01.T01:CDS
GCTGCAACAATGTCAACACC+TGG 0.584697 1:-30764550 None:intergenic
AAAAGTTGTTGAAGCATTTG+GGG 0.587682 1:+30768041 MsG0180001999.01.T01:CDS
CAACAATGTCAACACCTGGA+TGG 0.590000 1:-30764546 None:intergenic
ATGACCTTTCCCATATCCCA+TGG 0.591083 1:-30763772 None:intergenic
GCGTTGAAGAAAGGAAGTGG+TGG 0.596128 1:+30768012 MsG0180001999.01.T01:CDS
GCTGTGGTCAAAAGGTTACA+AGG 0.600822 1:+30768293 MsG0180001999.01.T01:CDS
GAAGTTAACAGACCCCGACT+TGG 0.608124 1:+30768087 MsG0180001999.01.T01:CDS
GTGTTGCGTGAAGCAGGTGA+AGG 0.611430 1:+30764346 MsG0180001999.01.T01:CDS
TTTGGGAAGTTGTGAAGCTG+TGG 0.613943 1:+30768277 MsG0180001999.01.T01:CDS
AAATTGATGCCTATCAGGAT+CGG 0.620235 1:-30768124 None:intergenic
GTTTCCATGGGATATGGGAA+AGG 0.633221 1:+30763768 MsG0180001999.01.T01:CDS
AAAACAATTTGGCCAAGTCG+GGG 0.649885 1:-30768099 None:intergenic
GAGGAAATTCTACTAGACAA+TGG 0.658991 1:+30768063 MsG0180001999.01.T01:CDS
ACTGATGCAAGCGATTCCCA+AGG 0.659023 1:+30764592 MsG0180001999.01.T01:CDS
ATACTGACACAAATTCGTGA+AGG 0.686922 1:+30764670 MsG0180001999.01.T01:CDS
TCGTGAAAGATCCCAACACG+AGG 0.703551 1:+30764401 MsG0180001999.01.T01:CDS
TGGCTCCTTATATATCCTCG+GGG 0.719386 1:+30768250 MsG0180001999.01.T01:CDS
AACTTCCCAAAAGATCCCCG+AGG 0.762062 1:-30768265 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAAATTCTGTTTTTTATTA+AGG - Chr1:30765522-30765541 None:intergenic 10.0%
!!! GATCTTTTTTATTTTTTATA+TGG + Chr1:30766015-30766034 MsG0180001999.01.T01:intron 10.0%
!!! TAAATTCTGTTTTTTATTAA+GGG - Chr1:30765521-30765540 None:intergenic 10.0%
!!! TTGAAACTTTTAAAATATAA+GGG - Chr1:30766119-30766138 None:intergenic 10.0%
!! ATCTTTAAATAGTTAAGTAA+CGG - Chr1:30766185-30766204 None:intergenic 15.0%
!!! AAGATAAAACATTTTCTTTT+TGG + Chr1:30767715-30767734 MsG0180001999.01.T01:intron 15.0%
!!! AATATCTCATTTTTCAATTA+TGG - Chr1:30764202-30764221 None:intergenic 15.0%
!!! ATATTTTAAAAGTTTCAAGT+TGG + Chr1:30766121-30766140 MsG0180001999.01.T01:CDS 15.0%
!!! ATGTTTTAAAAGTTTTAAGT+TGG - Chr1:30766342-30766361 None:intergenic 15.0%
!!! CTTGAAACTTTTAAAATATA+AGG - Chr1:30766120-30766139 None:intergenic 15.0%
!!! TTTAATATGTTTGATTTTGA+AGG + Chr1:30767604-30767623 MsG0180001999.01.T01:intron 15.0%
!!! TTTATCAGTTGATTTTAATT+TGG + Chr1:30765306-30765325 MsG0180001999.01.T01:intron 15.0%
!!! TTTTGTTTTGCTTTTAATTT+GGG + Chr1:30767938-30767957 MsG0180001999.01.T01:intron 15.0%
!!! TTTTTGTTTTGCTTTTAATT+TGG + Chr1:30767937-30767956 MsG0180001999.01.T01:intron 15.0%
!! AACAAGAAAAGTAGATATAT+TGG - Chr1:30764056-30764075 None:intergenic 20.0%
!! AATTAATGAAGGATAATTAG+AGG + Chr1:30763941-30763960 MsG0180001999.01.T01:intron 20.0%
!! ACAAGAAAAGTAGATATATT+GGG - Chr1:30764055-30764074 None:intergenic 20.0%
!! ATAATTAGAGGGAAAAATTA+GGG + Chr1:30763953-30763972 MsG0180001999.01.T01:intron 20.0%
!! ATTAATGAAGGATAATTAGA+GGG + Chr1:30763942-30763961 MsG0180001999.01.T01:intron 20.0%
!! CAAAAAAAAGTAAAAACACA+AGG - Chr1:30767923-30767942 None:intergenic 20.0%
!! TTATTATGATTTGAATTACC+AGG + Chr1:30767987-30768006 MsG0180001999.01.T01:intron 20.0%
!!! AACATATTTTTGTGTAAAAG+TGG + Chr1:30765190-30765209 MsG0180001999.01.T01:intron 20.0%
!!! AAGTGTCGAATAATTAAATA+TGG + Chr1:30765127-30765146 MsG0180001999.01.T01:intron 20.0%
!!! AGATTTAATTTTTCCATCTT+GGG - Chr1:30764637-30764656 None:intergenic 20.0%
!!! AGTGTCGAATAATTAAATAT+GGG + Chr1:30765128-30765147 MsG0180001999.01.T01:intron 20.0%
!!! ATATTTGATCAAACATTTTC+TGG - Chr1:30767568-30767587 None:intergenic 20.0%
!!! ATGTTTTAAAAGTTTCAAGT+TGG + Chr1:30766092-30766111 MsG0180001999.01.T01:CDS 20.0%
!!! TAGATTTAATTTTTCCATCT+TGG - Chr1:30764638-30764657 None:intergenic 20.0%
!!! TAGGTTAGATTTAAAATAGA+CGG + Chr1:30766644-30766663 MsG0180001999.01.T01:intron 20.0%
!!! TAGTACTCTATGTTTATTTT+AGG + Chr1:30766052-30766071 MsG0180001999.01.T01:intron 20.0%
!!! TATTTGATCAAACATTTTCT+GGG - Chr1:30767567-30767586 None:intergenic 20.0%
! AAAGATTCGATTGACAATAT+GGG + Chr1:30766199-30766218 MsG0180001999.01.T01:intron 25.0%
! AAGAATACAGTCATAATTCT+TGG + Chr1:30767055-30767074 MsG0180001999.01.T01:intron 25.0%
! AATATAGAAAAAGCAAGTTG+TGG + Chr1:30765167-30765186 MsG0180001999.01.T01:intron 25.0%
! AGTAGATATATTGGGTTTAT+AGG - Chr1:30764047-30764066 None:intergenic 25.0%
! AGTATTTGAATATCAAAGTG+GGG + Chr1:30763878-30763897 MsG0180001999.01.T01:intron 25.0%
! ATTACAATCCCAAAACATTT+AGG + Chr1:30764118-30764137 MsG0180001999.01.T01:intron 25.0%
! ATTGGCAGTAATTACTAAAA+TGG - Chr1:30767764-30767783 None:intergenic 25.0%
! CAGTATTTGAATATCAAAGT+GGG + Chr1:30763877-30763896 MsG0180001999.01.T01:intron 25.0%
! CATAAACATTCACCTTTATT+TGG - Chr1:30767266-30767285 None:intergenic 25.0%
! GAAACCTAAATCAAACTTAA+GGG + Chr1:30766404-30766423 MsG0180001999.01.T01:intron 25.0%
! GATAATTAGAGGGAAAAATT+AGG + Chr1:30763952-30763971 MsG0180001999.01.T01:intron 25.0%
! GTGTGTGTATATATACTTTA+TGG - Chr1:30765591-30765610 None:intergenic 25.0%
! TAAAGATTCGATTGACAATA+TGG + Chr1:30766198-30766217 MsG0180001999.01.T01:intron 25.0%
! TCAATTTGTATGGAAATCAT+CGG + Chr1:30765217-30765236 MsG0180001999.01.T01:intron 25.0%
! TCAGTATTTGAATATCAAAG+TGG + Chr1:30763876-30763895 MsG0180001999.01.T01:intron 25.0%
! TGAAACCTAAATCAAACTTA+AGG + Chr1:30766403-30766422 MsG0180001999.01.T01:intron 25.0%
! TGACTATTAGCAATTAATGA+AGG + Chr1:30763930-30763949 MsG0180001999.01.T01:intron 25.0%
! TTAAACTCAATATCATGTTG+CGG + Chr1:30766278-30766297 MsG0180001999.01.T01:intron 25.0%
! TTACAATCCCAAAACATTTA+GGG + Chr1:30764119-30764138 MsG0180001999.01.T01:intron 25.0%
! TTCAAGACATACAAAAAAGT+CGG + Chr1:30765541-30765560 MsG0180001999.01.T01:intron 25.0%
!! AAAAAAGTTGTTGAAGCATT+TGG + Chr1:30768039-30768058 MsG0180001999.01.T01:CDS 25.0%
!! AAAAAGTTGTTGAAGCATTT+GGG + Chr1:30768040-30768059 MsG0180001999.01.T01:CDS 25.0%
!! AAAATTTCCCCTAAATGTTT+TGG - Chr1:30764130-30764149 None:intergenic 25.0%
!! AAATTTCCCCTAAATGTTTT+GGG - Chr1:30764129-30764148 None:intergenic 25.0%
!! CTAATAAGCATTTAGAGTAA+GGG + Chr1:30763992-30764011 MsG0180001999.01.T01:intron 25.0%
!! CTTTTGTGTTATAAGCTTAA+TGG + Chr1:30767484-30767503 MsG0180001999.01.T01:intron 25.0%
!! TAAATAGTTAAGTAACGGAA+GGG - Chr1:30766180-30766199 None:intergenic 25.0%
!! TTAAATAGTTAAGTAACGGA+AGG - Chr1:30766181-30766200 None:intergenic 25.0%
!! TTTTTATGTATACTGAGTTG+AGG + Chr1:30767216-30767235 MsG0180001999.01.T01:intron 25.0%
!!! ATGTTTGATTTTGAAGGTAA+TGG + Chr1:30767610-30767629 MsG0180001999.01.T01:intron 25.0%
!!! CTATGTTTATTTTAGGTTTC+AGG + Chr1:30766059-30766078 MsG0180001999.01.T01:intron 25.0%
!!! TAAACTTGCCTTCTTTTTTT+AGG + Chr1:30764321-30764340 MsG0180001999.01.T01:intron 25.0%
!!! TCTGTTTTTTATTAAGGGAA+TGG - Chr1:30765516-30765535 None:intergenic 25.0%
AAACCCAATTGAAAACAAGT+TGG + Chr1:30765869-30765888 MsG0180001999.01.T01:intron 30.0%
AACCCAATTGAAAACAAGTT+GGG + Chr1:30765870-30765889 MsG0180001999.01.T01:intron 30.0%
AACGTTATTCTCATTGGAAT+TGG + Chr1:30766149-30766168 MsG0180001999.01.T01:CDS 30.0%
AAGTGGAATGTCAATTTGTA+TGG + Chr1:30765207-30765226 MsG0180001999.01.T01:intron 30.0%
ACTCAAATTCTCTACAAAAG+TGG + Chr1:30765812-30765831 MsG0180001999.01.T01:intron 30.0%
AGTGATCACAACTTAAACAA+AGG + Chr1:30765842-30765861 MsG0180001999.01.T01:intron 30.0%
ATACAAAGAGCTTCAAGATT+GGG + Chr1:30764766-30764785 MsG0180001999.01.T01:intron 30.0%
ATAGGCATCAATTTCTCAAT+CGG + Chr1:30768133-30768152 MsG0180001999.01.T01:CDS 30.0%
CAGAATGTCTACATAAATAG+GGG + Chr1:30764256-30764275 MsG0180001999.01.T01:intron 30.0%
CCAGAATGTCTACATAAATA+GGG + Chr1:30764255-30764274 MsG0180001999.01.T01:intron 30.0%
CCTTACTCTAAATGCTTATT+AGG - Chr1:30763994-30764013 None:intergenic 30.0%
GTTCAAAACGTTATTCTCAT+TGG + Chr1:30766143-30766162 MsG0180001999.01.T01:CDS 30.0%
TAATGCAAAGCTGCTAATTA+TGG - Chr1:30765769-30765788 None:intergenic 30.0%
TACAATCCCAAAACATTTAG+GGG + Chr1:30764120-30764139 MsG0180001999.01.T01:intron 30.0%
TAGTGTTAAGCAATTGACAT+AGG + Chr1:30766625-30766644 MsG0180001999.01.T01:intron 30.0%
TCAGAAAACAACTAATGTCA+AGG - Chr1:30766912-30766931 None:intergenic 30.0%
TCCAGAATGTCTACATAAAT+AGG + Chr1:30764254-30764273 MsG0180001999.01.T01:intron 30.0%
TGTTTATGATGATTTCCTTG+AGG + Chr1:30767541-30767560 MsG0180001999.01.T01:intron 30.0%
TTACTCACGTTGAAATAAGT+TGG - Chr1:30766310-30766329 None:intergenic 30.0%
TTATGATTTGAATTACCAGG+AGG + Chr1:30767990-30768009 MsG0180001999.01.T01:intron 30.0%
TTATGTAACTGAGTTTCCAT+GGG + Chr1:30763756-30763775 MsG0180001999.01.T01:CDS 30.0%
TTGGTTTCTATGAGATCATT+AGG - Chr1:30765982-30766001 None:intergenic 30.0%
! AAAAGTTGTTGAAGCATTTG+GGG + Chr1:30768041-30768060 MsG0180001999.01.T01:CDS 30.0%
! AATGAATTGTCCATTTTGTG+CGG + Chr1:30764469-30764488 MsG0180001999.01.T01:CDS 30.0%
! ATTGTTGAGTTTTCCCTAAT+AGG - Chr1:30763857-30763876 None:intergenic 30.0%
! CCTAATAAGCATTTAGAGTA+AGG + Chr1:30763991-30764010 MsG0180001999.01.T01:intron 30.0%
! GTTTGATTTAGGTTTCAAGT+TGG - Chr1:30766400-30766419 None:intergenic 30.0%
! TATGTAGACATTCTGGAAAA+AGG - Chr1:30764251-30764270 None:intergenic 30.0%
! TGATCCCTTAAGTTTGATTT+AGG - Chr1:30766411-30766430 None:intergenic 30.0%
!! AACCCAACTTGTTTTCAATT+GGG - Chr1:30765875-30765894 None:intergenic 30.0%
!! TCGGATTTGTTATTCTTCAT+TGG + Chr1:30765236-30765255 MsG0180001999.01.T01:intron 30.0%
!! TTTGAAGGTAATGGATTCAA+TGG + Chr1:30767619-30767638 MsG0180001999.01.T01:intron 30.0%
!!! ATTAGTTTTGGTGTCATTTG+TGG + Chr1:30765659-30765678 MsG0180001999.01.T01:intron 30.0%
!!! TTTTGAAGTTTTTGCTGTGA+TGG + Chr1:30768213-30768232 MsG0180001999.01.T01:intron 30.0%
AAAAACAATTTGGCCAAGTC+GGG - Chr1:30768103-30768122 None:intergenic 35.0%
AAAAATTAAACACCGTTGCC+GGG - Chr1:30766744-30766763 None:intergenic 35.0%
AAATTGATGCCTATCAGGAT+CGG - Chr1:30768127-30768146 None:intergenic 35.0%
AAGAAGTAGGGATATCATTC+AGG + Chr1:30765632-30765651 MsG0180001999.01.T01:intron 35.0%
AAGACATACAAAAAAGTCGG+TGG + Chr1:30765544-30765563 MsG0180001999.01.T01:intron 35.0%
AAGATCACAACTAAGCGATT+TGG - Chr1:30766001-30766020 None:intergenic 35.0%
AATAACAACCGAACTTGAGA+GGG - Chr1:30767969-30767988 None:intergenic 35.0%
AATCATGTGCCTAAGAAGTA+GGG + Chr1:30765620-30765639 MsG0180001999.01.T01:intron 35.0%
AATTCGTGAAGGTGAAAAGT+AGG + Chr1:30764681-30764700 MsG0180001999.01.T01:intron 35.0%
ACCAACATACTTAAGGTGAT+TGG + Chr1:30763733-30763752 MsG0180001999.01.T01:CDS 35.0%
ACCAATCACCTTAAGTATGT+TGG - Chr1:30763737-30763756 None:intergenic 35.0%
AGACCATGTGAACCAAATAA+AGG + Chr1:30767251-30767270 MsG0180001999.01.T01:intron 35.0%
AGGTCTATTATAGTCACTTG+AGG + Chr1:30767658-30767677 MsG0180001999.01.T01:intron 35.0%
ATACTGACACAAATTCGTGA+AGG + Chr1:30764670-30764689 MsG0180001999.01.T01:CDS 35.0%
ATATATGATGCTTCTTGCTC+AGG + Chr1:30764823-30764842 MsG0180001999.01.T01:intron 35.0%
ATATGTGTGTCCATGAATAG+AGG - Chr1:30767806-30767825 None:intergenic 35.0%
ATCTAGTCGTTGTAGTATAG+TGG + Chr1:30766677-30766696 MsG0180001999.01.T01:intron 35.0%
ATGCAAGTATTAAGCTGAAG+AGG - Chr1:30767331-30767350 None:intergenic 35.0%
ATGTCCCAACAAAACTCATT+TGG + Chr1:30765743-30765762 MsG0180001999.01.T01:intron 35.0%
ATGTCTCTCTTAAACGTTGT+TGG - Chr1:30765002-30765021 None:intergenic 35.0%
CAAAAACAATTTGGCCAAGT+CGG - Chr1:30768104-30768123 None:intergenic 35.0%
CAACACCTCCTAAAAAAAGA+AGG - Chr1:30764332-30764351 None:intergenic 35.0%
CATACAAAGAGCTTCAAGAT+TGG + Chr1:30764765-30764784 MsG0180001999.01.T01:intron 35.0%
CCCTATTTATGTAGACATTC+TGG - Chr1:30764258-30764277 None:intergenic 35.0%
CTTGGAAACCAACATACTTA+AGG + Chr1:30763726-30763745 MsG0180001999.01.T01:CDS 35.0%
GAAAAATTAAACACCGTTGC+CGG - Chr1:30766745-30766764 None:intergenic 35.0%
GAATGATATCCCTACTTCTT+AGG - Chr1:30765632-30765651 None:intergenic 35.0%
GACTATAATAGACCTGAAAG+TGG - Chr1:30767653-30767672 None:intergenic 35.0%
GAGGAAATTCTACTAGACAA+TGG + Chr1:30768063-30768082 MsG0180001999.01.T01:CDS 35.0%
GAGGGAAAAATTAGGGTAAA+TGG + Chr1:30763960-30763979 MsG0180001999.01.T01:intron 35.0%
GTTATGTAACTGAGTTTCCA+TGG + Chr1:30763755-30763774 MsG0180001999.01.T01:CDS 35.0%
TAAACTTGACGTCTCATTAC+TGG + Chr1:30765096-30765115 MsG0180001999.01.T01:intron 35.0%
TAAGAGCGAAATACGCAAAT+AGG + Chr1:30764861-30764880 MsG0180001999.01.T01:intron 35.0%
TAATAACAACCGAACTTGAG+AGG - Chr1:30767970-30767989 None:intergenic 35.0%
TAATCATGTGCCTAAGAAGT+AGG + Chr1:30765619-30765638 MsG0180001999.01.T01:intron 35.0%
TAATGTTGATCCAAAGATGC+AGG + Chr1:30766511-30766530 MsG0180001999.01.T01:intron 35.0%
TACAGTCATAATTCTTGGCA+TGG + Chr1:30767060-30767079 MsG0180001999.01.T01:intron 35.0%
TCTTCAGCTTAATACTTGCA+TGG + Chr1:30767330-30767349 MsG0180001999.01.T01:intron 35.0%
TGTTTCAAAACCCCTAACAA+TGG - Chr1:30767420-30767439 None:intergenic 35.0%
TTATTAAAAATGGCCCATGC+AGG + Chr1:30766822-30766841 MsG0180001999.01.T01:intron 35.0%
TTGAGAAATTGATGCCTATC+AGG - Chr1:30768132-30768151 None:intergenic 35.0%
! AAAAAATTGGCCTGCATCTT+TGG - Chr1:30766524-30766543 None:intergenic 35.0%
! ATTAGAAGATGGGTTTCCTT+GGG - Chr1:30764611-30764630 None:intergenic 35.0%
! TCACCTTTATTTGGTTCACA+TGG - Chr1:30767257-30767276 None:intergenic 35.0%
! TCGATTGACAATATGGGTTA+TGG + Chr1:30766205-30766224 MsG0180001999.01.T01:intron 35.0%
! TGATGGTTGCTTTAGATTGT+TGG + Chr1:30768230-30768249 MsG0180001999.01.T01:intron 35.0%
! TTTCAACGTGAGTAACGTTT+TGG + Chr1:30766315-30766334 MsG0180001999.01.T01:intron 35.0%
!! AGGTAATGGATTCAATGGTT+TGG + Chr1:30767624-30767643 MsG0180001999.01.T01:intron 35.0%
!! CTTAAGTATGTTGGTTTCCA+AGG - Chr1:30763728-30763747 None:intergenic 35.0%
!! GAACCCAACTTGTTTTCAAT+TGG - Chr1:30765876-30765895 None:intergenic 35.0%
!! TATGGCCAAATGAGTTTTGT+TGG - Chr1:30765751-30765770 None:intergenic 35.0%
!!! ACTTGCCTTCTTTTTTTAGG+AGG + Chr1:30764324-30764343 MsG0180001999.01.T01:intron 35.0%
!!! ATGGCCAAATGAGTTTTGTT+GGG - Chr1:30765750-30765769 None:intergenic 35.0%
!!! CATTCAGGTGTCATTAGTTT+TGG + Chr1:30765647-30765666 MsG0180001999.01.T01:intron 35.0%
!!! GGGGTTTTGAAACATTGATT+TGG + Chr1:30767426-30767445 MsG0180001999.01.T01:intron 35.0%
!!! TTTGGTGTCATTTGTGGTTT+TGG + Chr1:30765665-30765684 MsG0180001999.01.T01:intron 35.0%
AAAACAATTTGGCCAAGTCG+GGG - Chr1:30768102-30768121 None:intergenic 40.0%
AAAAGAGTAAGGTCTGTCAC+CGG - Chr1:30764524-30764543 None:intergenic 40.0%
AAAATTAAACACCGTTGCCG+GGG - Chr1:30766743-30766762 None:intergenic 40.0%
AACTGAGTTTCCATGGGATA+TGG + Chr1:30763762-30763781 MsG0180001999.01.T01:CDS 40.0%
AAGATCCCCGAGGATATATA+AGG - Chr1:30768258-30768277 None:intergenic 40.0%
ACTCAATATCATGTTGCGGA+AGG + Chr1:30766282-30766301 MsG0180001999.01.T01:intron 40.0%
ACTGAGTTTCCATGGGATAT+GGG + Chr1:30763763-30763782 MsG0180001999.01.T01:CDS 40.0%
AGTCTCTTGTTGGAGATACT+TGG - Chr1:30764575-30764594 None:intergenic 40.0%
ATCTTCTAATGCTCCCAAGA+TGG + Chr1:30764621-30764640 MsG0180001999.01.T01:CDS 40.0%
CAGGATCGGCAAAAACAATT+TGG - Chr1:30768113-30768132 None:intergenic 40.0%
CGGTATAGTACCTCTATTCA+TGG + Chr1:30767793-30767812 MsG0180001999.01.T01:intron 40.0%
CTCAATATCATGTTGCGGAA+GGG + Chr1:30766283-30766302 MsG0180001999.01.T01:intron 40.0%
CTCTAACCAACTGAGCTAAT+GGG + Chr1:30766886-30766905 MsG0180001999.01.T01:intron 40.0%
GAATATCAAAGTGGGGATAG+AGG + Chr1:30763885-30763904 MsG0180001999.01.T01:intron 40.0%
GCTATTGTTATGTTCTCTCC+CGG + Chr1:30764502-30764521 MsG0180001999.01.T01:CDS 40.0%
GTCATAATTCTTGGCATGGA+TGG + Chr1:30767064-30767083 MsG0180001999.01.T01:intron 40.0%
TAATTCTTGGCATGGATGGA+AGG + Chr1:30767068-30767087 MsG0180001999.01.T01:intron 40.0%
TATTCCAACGCTGCCTATTA+GGG + Chr1:30763841-30763860 MsG0180001999.01.T01:intron 40.0%
TCTCTAACCAACTGAGCTAA+TGG + Chr1:30766885-30766904 MsG0180001999.01.T01:intron 40.0%
TTATTCCAACGCTGCCTATT+AGG + Chr1:30763840-30763859 MsG0180001999.01.T01:intron 40.0%
TTGGCTCCTTATATATCCTC+GGG + Chr1:30768249-30768268 MsG0180001999.01.T01:CDS 40.0%
TTTGCCAACCAAGAATGTGT+TGG + Chr1:30766975-30766994 MsG0180001999.01.T01:intron 40.0%
! AATGTAACTTGCCTCGTGTT+GGG - Chr1:30764415-30764434 None:intergenic 40.0%
! ATATATCCTCGGGGATCTTT+TGG + Chr1:30768259-30768278 MsG0180001999.01.T01:CDS 40.0%
! CATTAGAAGATGGGTTTCCT+TGG - Chr1:30764612-30764631 None:intergenic 40.0%
! GTTGGCTCCTTATATATCCT+CGG + Chr1:30768248-30768267 MsG0180001999.01.T01:CDS 40.0%
! TATATCCTCGGGGATCTTTT+GGG + Chr1:30768260-30768279 MsG0180001999.01.T01:CDS 40.0%
! TGGATGGAAGGTATGATACA+AGG + Chr1:30767080-30767099 MsG0180001999.01.T01:intron 40.0%
!! ATCTTGGGAGCATTAGAAGA+TGG - Chr1:30764622-30764641 None:intergenic 40.0%
!! TCAGTACACACAGTTGCTTT+TGG + Chr1:30767025-30767044 MsG0180001999.01.T01:intron 40.0%
!! TCTTGGGAGCATTAGAAGAT+GGG - Chr1:30764621-30764640 None:intergenic 40.0%
!! TGAATAGAGGTACTATACCG+CGG - Chr1:30767793-30767812 None:intergenic 40.0%
!!! TTGTTTTTGCCGATCCTGAT+AGG + Chr1:30768115-30768134 MsG0180001999.01.T01:CDS 40.0%
AAAGAGTAAGGTCTGTCACC+GGG - Chr1:30764523-30764542 None:intergenic 45.0%
ACTGAGCACCAACACATTCT+TGG - Chr1:30766986-30767005 None:intergenic 45.0%
AGCACCAACACATTCTTGGT+TGG - Chr1:30766982-30767001 None:intergenic 45.0%
ATAGAGGAGGGAAAAGTGGT+AGG + Chr1:30763901-30763920 MsG0180001999.01.T01:intron 45.0%
ATCAAAGTGGGGATAGAGGA+GGG + Chr1:30763889-30763908 MsG0180001999.01.T01:intron 45.0%
ATGACCTTTCCCATATCCCA+TGG - Chr1:30763775-30763794 None:intergenic 45.0%
CAAAACCCCTAACAATGGAG+CGG - Chr1:30767415-30767434 None:intergenic 45.0%
CAACAATGTCAACACCTGGA+TGG - Chr1:30764549-30764568 None:intergenic 45.0%
CATACAAAAAAGTCGGTGGC+TGG + Chr1:30765548-30765567 MsG0180001999.01.T01:intron 45.0%
GCTCAGTTTCACGTTCAAGA+GGG + Chr1:30766999-30767018 MsG0180001999.01.T01:intron 45.0%
GCTGTGGTCAAAAGGTTACA+AGG + Chr1:30768293-30768312 MsG0180001999.01.T01:CDS 45.0%
GTTCGAATCGAAACCTGCAT+GGG - Chr1:30766838-30766857 None:intergenic 45.0%
GTTGTGAAGCTGTGGTCAAA+AGG + Chr1:30768285-30768304 MsG0180001999.01.T01:CDS 45.0%
GTTGTTGGATGTCCACAACA+AGG - Chr1:30764987-30765006 None:intergenic 45.0%
GTTTCCATGGGATATGGGAA+AGG + Chr1:30763768-30763787 MsG0180001999.01.T01:CDS 45.0%
TATCAAAGTGGGGATAGAGG+AGG + Chr1:30763888-30763907 MsG0180001999.01.T01:intron 45.0%
TGAAGCAGGTGAAGGAATCA+TGG + Chr1:30764354-30764373 MsG0180001999.01.T01:CDS 45.0%
TGCTCAGTTTCACGTTCAAG+AGG + Chr1:30766998-30767017 MsG0180001999.01.T01:intron 45.0%
TGGCTCCTTATATATCCTCG+GGG + Chr1:30768250-30768269 MsG0180001999.01.T01:CDS 45.0%
TTTGGGAAGTTGTGAAGCTG+TGG + Chr1:30768277-30768296 MsG0180001999.01.T01:CDS 45.0%
! ACGGAAGAGCATGAAATGAG+TGG - Chr1:30767383-30767402 None:intergenic 45.0%
! AGTTGTTGAAGCATTTGGGG+AGG + Chr1:30768044-30768063 MsG0180001999.01.T01:CDS 45.0%
! ATAGGCAGCGTTGGAATAAG+TGG - Chr1:30763839-30763858 None:intergenic 45.0%
! CAAACATTTTCTGGGCCTCA+AGG - Chr1:30767559-30767578 None:intergenic 45.0%
! GAATGTAACTTGCCTCGTGT+TGG - Chr1:30764416-30764435 None:intergenic 45.0%
! GGTGACAGACCTTACTCTTT+TGG + Chr1:30764523-30764542 MsG0180001999.01.T01:CDS 45.0%
! TAGGCAGCGTTGGAATAAGT+GGG - Chr1:30763838-30763857 None:intergenic 45.0%
! TGAAGAAAGGAAGTGGTGGA+TGG + Chr1:30768016-30768035 MsG0180001999.01.T01:CDS 45.0%
! TGATAAGAGAGAGCGCAAGA+GGG - Chr1:30765267-30765286 None:intergenic 45.0%
! TTTTCCCTAATAGGCAGCGT+TGG - Chr1:30763848-30763867 None:intergenic 45.0%
!! ACATTCTCAAAGCGTCGAAC+AGG + Chr1:30764430-30764449 MsG0180001999.01.T01:CDS 45.0%
!! ACTACATCAGTGTCGACAAC+AGG - Chr1:30767877-30767896 None:intergenic 45.0%
!! ATGGTTTGGATGCCACTTTC+AGG + Chr1:30767638-30767657 MsG0180001999.01.T01:intron 45.0%
!! CTACATCAGTGTCGACAACA+GGG - Chr1:30767876-30767895 None:intergenic 45.0%
!! GTATGTTGGTTTCCAAGGCA+TGG - Chr1:30763723-30763742 None:intergenic 45.0%
!! TGTCTCTCTAAGCCTTGTTG+TGG + Chr1:30764972-30764991 MsG0180001999.01.T01:intron 45.0%
!! AAAAAAAATTAAAAATTGAA+AGG - Chr1:30765367-30765386 None:intergenic 5.0%
!! AGAAATAAAATAAATATTTA+TGG + Chr1:30765424-30765443 MsG0180001999.01.T01:intron 5.0%
!! GTATAAATTAAATAAAAAAT+TGG - Chr1:30766537-30766556 None:intergenic 5.0%
!! TTATGAAAAATTATTAAAAA+TGG + Chr1:30766812-30766831 MsG0180001999.01.T01:intron 5.0%
!!! TTTTTTATTTAATTTATACT+TGG + Chr1:30766538-30766557 MsG0180001999.01.T01:intron 5.0%
AACTTCCCAAAAGATCCCCG+AGG - Chr1:30768268-30768287 None:intergenic 50.0%
AATGGAGCGGTGGCAATGTA+CGG - Chr1:30767402-30767421 None:intergenic 50.0%
ACTATACCGCGGTAGCAGAT+TGG - Chr1:30767782-30767801 None:intergenic 50.0%
ACTGATGCAAGCGATTCCCA+AGG + Chr1:30764592-30764611 MsG0180001999.01.T01:CDS 50.0%
ATTGCCACCGCTCCATTGTT+AGG + Chr1:30767405-30767424 MsG0180001999.01.T01:intron 50.0%
CCTGGATGGCCAAAAGAGTA+AGG - Chr1:30764535-30764554 None:intergenic 50.0%
CGCTTGCATCAGTCTCTTGT+TGG - Chr1:30764585-30764604 None:intergenic 50.0%
GAAGTTAACAGACCCCGACT+TGG + Chr1:30768087-30768106 MsG0180001999.01.T01:CDS 50.0%
GACTTCTGCTCCGCACAAAA+TGG - Chr1:30764482-30764501 None:intergenic 50.0%
GAGTCGTGCTAATAACGCGA+AGG - Chr1:30766867-30766886 None:intergenic 50.0%
GCGTTGAAGAAAGGAAGTGG+TGG + Chr1:30768012-30768031 MsG0180001999.01.T01:CDS 50.0%
GCTGCAACAATGTCAACACC+TGG - Chr1:30764553-30764572 None:intergenic 50.0%
GGGCAAAACCCTCTCAAGTT+CGG + Chr1:30767958-30767977 MsG0180001999.01.T01:intron 50.0%
GGTTCGAATCGAAACCTGCA+TGG - Chr1:30766839-30766858 None:intergenic 50.0%
TCAAGGCCCATTAGCTCAGT+TGG - Chr1:30766895-30766914 None:intergenic 50.0%
TCGTGAAAGATCCCAACACG+AGG + Chr1:30764401-30764420 MsG0180001999.01.T01:CDS 50.0%
TTACTGCCAATCTGCTACCG+CGG + Chr1:30767773-30767792 MsG0180001999.01.T01:intron 50.0%
TTCCTTTCTTCAACGCCTCC+TGG - Chr1:30768008-30768027 None:intergenic 50.0%
TTCGCTCTTATTCCCACCAC+TGG - Chr1:30764851-30764870 None:intergenic 50.0%
TTGCCACCGCTCCATTGTTA+GGG + Chr1:30767406-30767425 MsG0180001999.01.T01:intron 50.0%
! AGGCAGCGTTGGAATAAGTG+GGG - Chr1:30763837-30763856 None:intergenic 50.0%
! CCTTACTCTTTTGGCCATCC+AGG + Chr1:30764532-30764551 MsG0180001999.01.T01:CDS 50.0%
! GTGATAAGAGAGAGCGCAAG+AGG - Chr1:30765268-30765287 None:intergenic 50.0%
!! GAGGCGTTGAAGAAAGGAAG+TGG + Chr1:30768009-30768028 MsG0180001999.01.T01:CDS 50.0%
!! TACCAGGAGGCGTTGAAGAA+AGG + Chr1:30768003-30768022 MsG0180001999.01.T01:intron 50.0%
AACCCCTAACAATGGAGCGG+TGG - Chr1:30767412-30767431 None:intergenic 55.0%
AAGTATTCCCGCCTGTCACG+CGG + Chr1:30766701-30766720 MsG0180001999.01.T01:intron 55.0%
CGGATGTAGAAGCCATGCCT+TGG + Chr1:30763708-30763727 MsG0180001999.01.T01:CDS 55.0%
CTTGCTCAGGAACCAGTGGT+GGG + Chr1:30764836-30764855 MsG0180001999.01.T01:intron 55.0%
GCTAATAACGCGAAGGTCGC+AGG - Chr1:30766860-30766879 None:intergenic 55.0%
GCTTCTTGCTCAGGAACCAG+TGG + Chr1:30764832-30764851 MsG0180001999.01.T01:intron 55.0%
GGGGATAGAGGAGGGAAAAG+TGG + Chr1:30763897-30763916 MsG0180001999.01.T01:intron 55.0%
GTGTTGCGTGAAGCAGGTGA+AGG + Chr1:30764346-30764365 MsG0180001999.01.T01:CDS 55.0%
TCTTGCTCAGGAACCAGTGG+TGG + Chr1:30764835-30764854 MsG0180001999.01.T01:intron 55.0%
TGCCACCGCTCCATTGTTAG+GGG + Chr1:30767407-30767426 MsG0180001999.01.T01:intron 55.0%
!! TAGGAGGTGTTGCGTGAAGC+AGG + Chr1:30764340-30764359 MsG0180001999.01.T01:intron 55.0%
AGTATTCCCGCCTGTCACGC+GGG + Chr1:30766702-30766721 MsG0180001999.01.T01:intron 60.0%
CCGGGTTCGATCCCCGGCAA+CGG + Chr1:30766729-30766748 MsG0180001999.01.T01:intron 70.0%
CCGTTGCCGGGGATCGAACC+CGG - Chr1:30766732-30766751 None:intergenic 70.0%
CGTTGCCGGGGATCGAACCC+GGG - Chr1:30766731-30766750 None:intergenic 70.0%
GGTGACCCGGGTTCGATCCC+CGG + Chr1:30766723-30766742 MsG0180001999.01.T01:intron 70.0%
ACCCGGGTCACCCGCGTGAC+AGG - Chr1:30766715-30766734 None:intergenic 75.0%
CGCCTGTCACGCGGGTGACC+CGG + Chr1:30766710-30766729 MsG0180001999.01.T01:intron 75.0%
CGGGTCACCCGCGTGACAGG+CGG - Chr1:30766712-30766731 None:intergenic 75.0%
GCCTGTCACGCGGGTGACCC+GGG + Chr1:30766711-30766730 MsG0180001999.01.T01:intron 75.0%
GGGTCACCCGCGTGACAGGC+GGG - Chr1:30766711-30766730 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr1 gene 30763706 30768329 30763706 ID=MsG0180001999.01;Name=MsG0180001999.01
Chr1 mRNA 30763706 30768329 30763706 ID=MsG0180001999.01.T01;Parent=MsG0180001999.01;Name=MsG0180001999.01.T01;_AED=0.41;_eAED=0.42;_QI=0|0|0|0.6|1|0.8|5|0|255
Chr1 exon 30763706 30763789 30763706 ID=MsG0180001999.01.T01:exon:42728;Parent=MsG0180001999.01.T01
Chr1 exon 30764343 30764698 30764343 ID=MsG0180001999.01.T01:exon:42729;Parent=MsG0180001999.01.T01
Chr1 exon 30766074 30766170 30766074 ID=MsG0180001999.01.T01:exon:42730;Parent=MsG0180001999.01.T01
Chr1 exon 30768009 30768154 30768009 ID=MsG0180001999.01.T01:exon:42731;Parent=MsG0180001999.01.T01
Chr1 exon 30768245 30768329 30768245 ID=MsG0180001999.01.T01:exon:42732;Parent=MsG0180001999.01.T01
Chr1 CDS 30763706 30763789 30763706 ID=MsG0180001999.01.T01:cds;Parent=MsG0180001999.01.T01
Chr1 CDS 30764343 30764698 30764343 ID=MsG0180001999.01.T01:cds;Parent=MsG0180001999.01.T01
Chr1 CDS 30766074 30766170 30766074 ID=MsG0180001999.01.T01:cds;Parent=MsG0180001999.01.T01
Chr1 CDS 30768009 30768154 30768009 ID=MsG0180001999.01.T01:cds;Parent=MsG0180001999.01.T01
Chr1 CDS 30768245 30768329 30768245 ID=MsG0180001999.01.T01:cds;Parent=MsG0180001999.01.T01
Gene Sequence

>MsG0180001999.01.T01

AACGGATGTAGAAGCCATGCCTTGGAAACCAACATACTTAAGGTGATTGGTTATGTAACTGAGTTTCCATGGGATATGGGAAAGGAGGTGTTGCGTGAAGCAGGTGAAGGAATCATGGTTCGTCGTAAAATTGAGACTGAGATCGTGAAAGATCCCAACACGAGGCAAGTTACATTCTCAAAGCGTCGAACAGGCTTATTCAAGAAAGCAAATGAATTGTCCATTTTGTGCGGAGCAGAAGTCGCTATTGTTATGTTCTCTCCCGGTGACAGACCTTACTCTTTTGGCCATCCAGGTGTTGACATTGTTGCAGCCAAGTATCTCCAACAAGAGACTGATGCAAGCGATTCCCAAGGAAACCCATCTTCTAATGCTCCCAAGATGGAAAAATTAAATCTAGAACTTGCTGAGATACTGACACAAATTCGTGAAGGTGAAAAGTTTCAGGTTGATCTCTTATGTTTTAAAAGTTTCAAGTTGGTCCCTTATATTTTAAAAGTTTCAAGTTGGTTCAAAACGTTATTCTCATTGGAATTGGAGGCGTTGAAGAAAGGAAGTGGTGGATGGAAAAAAGTTGTTGAAGCATTTGGGGAGGAAATTCTACTAGACAATGGTGAAGTTAACAGACCCCGACTTGGCCAAATTGTTTTTGCCGATCCTGATAGGCATCAATTTCTCAATCGATTGTTGGCTCCTTATATATCCTCGGGGATCTTTTGGGAAGTTGTGAAGCTGTGGTCAAAAGGTTACAAGGTCATTGTTATTTGA
Protein sequence

>MsG0180001999.01.T01

NGCRSHALETNILKVIGYVTEFPWDMGKEVLREAGEGIMVRRKIETEIVKDPNTRQVTFSKRRTGLFKKANELSILCGAEVAIVMFSPGDRPYSFGHPGVDIVAAKYLQQETDASDSQGNPSSNAPKMEKLNLELAEILTQIREGEKFQVDLLCFKSFKLVPYILKVSSWFKTLFSLELEALKKGSGGWKKVVEAFGEEILLDNGEVNRPRLGQIVFADPDRHQFLNRLLAPYISSGIFWEVVKLWSKGYKVIVI*