AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180003217.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180003217.01.T01 MTR_1g035570 63.571 280 49 4 223 460 20 288 4.73e-109 330
MsG0180003217.01.T01 MTR_1g035490 68.657 201 50 4 263 461 9 198 5.40e-80 252
MsG0180003217.01.T01 MTR_1g035640 46.570 277 94 2 223 460 20 281 1.18e-71 235
MsG0180003217.01.T01 MTR_1g035620 42.414 290 100 11 216 462 17 282 2.11e-52 182
MsG0180003217.01.T01 MTR_1g050845 41.724 290 90 9 216 462 17 270 7.62e-49 180
MsG0180003217.01.T01 MTR_6g061070 34.459 296 129 10 224 460 34 323 2.71e-32 129
MsG0180003217.01.T01 MTR_1g035650 34.300 207 73 5 216 379 17 203 8.72e-25 102
MsG0180003217.01.T01 MTR_3g047490 53.165 79 32 1 3 81 27 100 1.79e-17 84.0
MsG0180003217.01.T01 MTR_5g044670 24.252 301 162 8 224 474 32 316 8.80e-17 81.6
MsG0180003217.01.T01 MTR_7g050710 24.585 301 142 8 223 459 28 307 1.17e-15 78.2
MsG0180003217.01.T01 MTR_0132s0050 51.613 62 30 0 3 64 27 88 3.35e-15 78.6
MsG0180003217.01.T01 MTR_7g050560 24.503 302 149 10 224 471 29 305 4.25e-15 76.6
MsG0180003217.01.T01 MTR_5g049460 50.000 62 31 0 3 64 27 88 1.74e-14 76.3
MsG0180003217.01.T01 MTR_6g039060 51.613 62 30 0 3 64 27 88 3.91e-14 75.1
MsG0180003217.01.T01 MTR_3g098790 24.706 340 197 15 181 483 9 326 5.64e-14 73.2
MsG0180003217.01.T01 MTR_0002s0140 51.613 62 30 0 3 64 27 88 5.65e-14 72.4
MsG0180003217.01.T01 MTR_3g436840 45.745 94 45 2 1 91 27 117 1.16e-13 73.6
MsG0180003217.01.T01 MTR_1g108780 26.183 317 144 11 223 473 12 304 7.68e-13 70.9
MsG0180003217.01.T01 MTR_7g050590 24.324 296 147 9 224 459 2 280 1.96e-12 68.2
MsG0180003217.01.T01 MTR_6g033905 49.231 65 32 1 5 69 34 97 2.83e-12 69.3
MsG0180003217.01.T01 MTR_3g061310 25.514 243 148 7 227 457 63 284 4.40e-12 67.0
MsG0180003217.01.T01 MTR_0010s0130 44.615 65 36 0 3 67 27 91 2.16e-11 66.6
MsG0180003217.01.T01 MTR_3g031890 40.741 81 42 2 5 85 34 108 2.33e-11 62.0
MsG0180003217.01.T01 MTR_1465s0010 44.928 69 37 1 5 73 22 89 2.82e-11 65.9
MsG0180003217.01.T01 MTR_1g423950 43.077 65 36 1 5 69 33 96 3.18e-11 60.8
MsG0180003217.01.T01 MTR_4g119430 46.154 65 34 1 5 69 33 96 3.52e-11 65.9
MsG0180003217.01.T01 MTR_7g009270 48.333 60 30 1 5 64 34 92 4.23e-11 65.9
MsG0180003217.01.T01 MTR_7g027027 39.474 76 45 1 5 80 33 107 4.35e-11 62.8
MsG0180003217.01.T01 MTR_3g040210 43.243 74 42 0 1 74 16 89 8.30e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 82 sgRNAs with CRISPR-Local

Find 574 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTTGAGGTTGATTCGTTTC+TGG 0.111519 1:-58541516 None:intergenic
GAACACCGTTTGGGAATTTA+AGG 0.181202 1:-58540305 None:intergenic
GACATTATAATTTCAAAATA+AGG 0.216590 1:-58541142 None:intergenic
TGACTCTACTTGAACTATTA+AGG 0.226667 1:-58532753 None:intergenic
ATAGTAACATTGAATGAAAT+TGG 0.236326 1:-58541479 None:intergenic
TATTTCTCCACATAAATCTT+AGG 0.291278 1:-58540255 None:intergenic
TTAAAGGGACTGCAACAATA+AGG 0.291725 1:+58541309 MsG0180003217.01.T01:CDS
GAGTATTTCAAGATGCTAAA+TGG 0.300004 1:+58532848 MsG0180003217.01.T01:CDS
AGATTTATGTGGAGAAATAT+TGG 0.302749 1:+58540259 MsG0180003217.01.T01:CDS
TGAACTTGGTCAAGGACTTT+TGG 0.305016 1:+58532882 MsG0180003217.01.T01:CDS
TTTGGGAATTTAAGGAATAT+AGG 0.312034 1:-58540297 None:intergenic
ATCATCAACAGATTTGATAT+TGG 0.329912 1:-58540495 None:intergenic
TTGGGAATTTAAGGAATATA+GGG 0.355557 1:-58540296 None:intergenic
CCTGTTTCTATCAAGGAAAA+AGG 0.356420 1:+58533848 MsG0180003217.01.T01:CDS
GATGGTGAAGAGGGTGAAAT+GGG 0.374481 1:-58534373 None:intergenic
TGGCAAAAGAAAAGTGAGTA+TGG 0.382194 1:+58540649 MsG0180003217.01.T01:CDS
GAAGTGTCTTCTATTGGTTC+AGG 0.384126 1:-58534400 None:intergenic
ATAATTTATTTCTAAAGTAT+TGG 0.389854 1:-58540471 None:intergenic
TGATGGTGAAGAGGGTGAAA+TGG 0.403050 1:-58534374 None:intergenic
AGATGAAAAGCTCAAGGCCT+TGG 0.409031 1:+58534132 MsG0180003217.01.T01:CDS
TTTCTTGTTGAACACCGTTT+GGG 0.413820 1:-58540314 None:intergenic
TAAAGGGACTGCAACAATAA+GGG 0.414381 1:+58541310 MsG0180003217.01.T01:CDS
TGAAGCTGGCCCTGCAGATC+AGG 0.414391 1:+58534324 MsG0180003217.01.T01:CDS
CGATTAAAGCTTCAGATGTT+GGG 0.416702 1:-58541099 None:intergenic
AAAACCTAGGAATTTCTTTG+AGG 0.431350 1:-58541531 None:intergenic
TCTGAGGTAGATTTGTCTAA+AGG 0.431433 1:-58534463 None:intergenic
CTTGGATGGAAGATTGTGAT+AGG 0.432387 1:+58534150 MsG0180003217.01.T01:CDS
AAGACAGAAGTGTCTTCTAT+TGG 0.434132 1:-58534406 None:intergenic
TTACGCCAATGGTTATTACT+TGG 0.435703 1:+58541171 MsG0180003217.01.T01:CDS
TAGGTTCTACAAAGATAAAT+TGG 0.437203 1:+58534169 MsG0180003217.01.T01:CDS
ATCTGAATTACCTGATCTGC+AGG 0.441194 1:-58534334 None:intergenic
AGTATTTCAAGATGCTAAAT+GGG 0.444412 1:+58532849 MsG0180003217.01.T01:CDS
CAAGTTCAAAGAACTAGAAA+TGG 0.448280 1:+58540629 MsG0180003217.01.T01:CDS
TGTTCTCTTGAAAATATACT+TGG 0.449633 1:-58541275 None:intergenic
TCGATTAAAGCTTCAGATGT+TGG 0.454021 1:-58541100 None:intergenic
TCAACCTCAAAGAAATTCCT+AGG 0.461027 1:+58541527 MsG0180003217.01.T01:CDS
CAAAGTAGCCATGGTGAAGA+AGG 0.465707 1:+58541066 MsG0180003217.01.T01:CDS
TGCTAAACCTGTTTCTATCA+AGG 0.477409 1:+58533841 MsG0180003217.01.T01:CDS
TCTATTGGTTCAGGTGCTGA+TGG 0.484624 1:-58534391 None:intergenic
AGTGATGAAGTGAGTGATAA+GGG 0.491546 1:+58540581 MsG0180003217.01.T01:CDS
TGCTTCTGGAGTTGCTTCAG+AGG 0.495265 1:-58534491 None:intergenic
GGACTCTGGAAGTGAGTTTG+AGG 0.495977 1:+58541345 MsG0180003217.01.T01:CDS
CTGATCTTATTCAGACAGAA+AGG 0.499707 1:+58534084 MsG0180003217.01.T01:intron
AGAAGACTATGGATATTCCA+TGG 0.500726 1:+58532726 None:intergenic
AGACAAATCTACCTCAGAAA+AGG 0.501514 1:+58534468 MsG0180003217.01.T01:CDS
CAAAAGATCACTTCTGAAGC+TGG 0.503222 1:+58534310 MsG0180003217.01.T01:CDS
GCAAATTTGAGATGATTCAA+AGG 0.505985 1:+58541453 MsG0180003217.01.T01:CDS
AGAGGGTGAAATGGGGAGAG+AGG 0.521992 1:-58534365 None:intergenic
CAATAAGGGTTGGTAAAGAA+AGG 0.522250 1:+58541324 MsG0180003217.01.T01:CDS
AAGTGATGAAGTGAGTGATA+AGG 0.524193 1:+58540580 MsG0180003217.01.T01:CDS
GAAAAGCTCAAGGCCTTGGA+TGG 0.527099 1:+58534136 MsG0180003217.01.T01:CDS
GAAATGGGGAGAGAGGTGAC+TGG 0.527182 1:-58534358 None:intergenic
TGGGCCAACATATGTGAACT+TGG 0.531084 1:+58532868 MsG0180003217.01.T01:CDS
TTGACCAAGTTCACATATGT+TGG 0.534216 1:-58532872 None:intergenic
GAGGGTTCCTAAGATTTATG+TGG 0.536061 1:+58540248 MsG0180003217.01.T01:intron
ATATTCCTTAAATTCCCAAA+CGG 0.544640 1:+58540300 MsG0180003217.01.T01:CDS
GAGTGATAAGGGTTCAGATG+AGG 0.561033 1:+58540592 MsG0180003217.01.T01:CDS
CAAGAAGTATGAAGTAAACA+TGG 0.567275 1:+58532796 MsG0180003217.01.T01:CDS
ACTTACCAAGTAATAACCAT+TGG 0.568490 1:-58541176 None:intergenic
TGAACTATTAAGGATTCCCA+TGG 0.576043 1:-58532743 None:intergenic
AATATCAAATCTGTTGATGA+TGG 0.577260 1:+58540497 MsG0180003217.01.T01:CDS
TTCAGGTGCTGATGGTGAAG+AGG 0.582753 1:-58534383 None:intergenic
AAGGTAACTCACCTGAGTAG+TGG 0.583534 1:-58534444 None:intergenic
GGTTGGTAAAGAAAGGACTC+TGG 0.588239 1:+58541331 MsG0180003217.01.T01:CDS
AATCTTGTATGAGTGGTGGT+TGG 0.588690 1:+58541387 MsG0180003217.01.T01:CDS
GGGACTGCAACAATAAGGGT+TGG 0.589089 1:+58541314 MsG0180003217.01.T01:CDS
ATGTCACATACTTACGCCAA+TGG 0.590674 1:+58541160 MsG0180003217.01.T01:CDS
AAAGGAAAGATGCAGAAGGT+TGG 0.591290 1:+58533866 MsG0180003217.01.T01:CDS
AATAGTTCAAGTAGAGTCAC+CGG 0.592431 1:+58532757 MsG0180003217.01.T01:CDS
CTATCACAATCTTCCATCCA+AGG 0.596730 1:-58534149 None:intergenic
AGGTAGTAACAAAGTAGCCA+TGG 0.597558 1:+58541057 MsG0180003217.01.T01:intron
TATGTGGAGAAATATTGGAA+AGG 0.599905 1:+58540264 MsG0180003217.01.T01:CDS
ATCAAGAGATGAAAAGCTCA+AGG 0.608005 1:+58534126 MsG0180003217.01.T01:CDS
GAAGACTATGGATATTCCAT+GGG 0.608051 1:+58532727 None:intergenic
ATGGTGAAGAGGGTGAAATG+GGG 0.610589 1:-58534372 None:intergenic
AAGTATGAAGTAAACATGGA+AGG 0.610824 1:+58532800 MsG0180003217.01.T01:CDS
AATCTTGCTCTCCACTACTC+AGG 0.621202 1:+58534433 MsG0180003217.01.T01:CDS
TCAGGTGCTGATGGTGAAGA+GGG 0.623713 1:-58534382 None:intergenic
TTGAGTGAAGCAAAATCCAC+CGG 0.625573 1:-58532776 None:intergenic
AACATATGTGAACTTGGTCA+AGG 0.631522 1:+58532874 MsG0180003217.01.T01:CDS
TCTGAATTACCTGATCTGCA+GGG 0.692293 1:-58534333 None:intergenic
AGTTCAAGTAGAGTCACCGG+TGG 0.701435 1:+58532760 MsG0180003217.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATATATATATATATAT+GGG + Chr1:58539553-58539572 MsG0180003217.01.T01:intron 0.0%
!! TATATATATATATATATATA+TGG + Chr1:58539554-58539573 MsG0180003217.01.T01:intron 0.0%
!!! TATTAAAATTAATTTTATTT+TGG + Chr1:58538813-58538832 MsG0180003217.01.T01:intron 0.0%
!!! AAATAATCTTTAAATTTTTC+AGG + Chr1:58541037-58541056 MsG0180003217.01.T01:intron 10.0%
!!! ATAATTTATTTCTAAAGTAT+TGG - Chr1:58540474-58540493 None:intergenic 10.0%
!!! ATATCTTTTTAATATCTTTT+AGG - Chr1:58538796-58538815 None:intergenic 10.0%
!!! ATTAAAATTGATTTTGATTT+TGG + Chr1:58538734-58538753 MsG0180003217.01.T01:intron 10.0%
!!! ATTTTTATTTTTGAACATTT+TGG + Chr1:58538696-58538715 MsG0180003217.01.T01:intron 10.0%
!!! TATGATAAACAAAATAATTT+TGG + Chr1:58540968-58540987 MsG0180003217.01.T01:intron 10.0%
!!! TTTCTTTTTAGTTTTTTATT+TGG + Chr1:58541560-58541579 MsG0180003217.01.T01:CDS 10.0%
!! ATGATGTAACTTTATAATTA+TGG - Chr1:58536100-58536119 None:intergenic 15.0%
!! GACATTATAATTTCAAAATA+AGG - Chr1:58541145-58541164 None:intergenic 15.0%
!!! AAGGTATTAAAATTGTAAAT+TGG + Chr1:58536044-58536063 MsG0180003217.01.T01:intron 15.0%
!!! ATATTTGGTTTCAAAAAAAT+TGG + Chr1:58540360-58540379 MsG0180003217.01.T01:intron 15.0%
!!! ATCAATTTTAATCTCTTTTT+TGG - Chr1:58538726-58538745 None:intergenic 15.0%
!!! ATCATTTTCATTATCTATAA+TGG - Chr1:58539499-58539518 None:intergenic 15.0%
!!! ATTACTAATTTACTAGATTT+TGG + Chr1:58540731-58540750 MsG0180003217.01.T01:intron 15.0%
!!! TAATCATTTTTGAAAATTTG+TGG - Chr1:58539067-58539086 None:intergenic 15.0%
!!! TATCATTTTTTTTACCTTAT+TGG + Chr1:58535636-58535655 MsG0180003217.01.T01:intron 15.0%
!!! TATTTGGTTTCAAAAAAATT+GGG + Chr1:58540361-58540380 MsG0180003217.01.T01:intron 15.0%
!!! TATTTTAAGGTTAAGATATT+TGG + Chr1:58540446-58540465 MsG0180003217.01.T01:CDS 15.0%
!!! TTTATATGTTGTGAATATTT+TGG + Chr1:58538082-58538101 MsG0180003217.01.T01:intron 15.0%
!!! TTTTTTTTGATAATGACAAA+GGG + Chr1:58535543-58535562 MsG0180003217.01.T01:intron 15.0%
!! AAAATTTCAAATGCCATTAA+TGG - Chr1:58535605-58535624 None:intergenic 20.0%
!! AAATTTCAAATGCCATTAAT+GGG - Chr1:58535604-58535623 None:intergenic 20.0%
!! AAGTTCTTGTTAATCTTATA+TGG + Chr1:58538152-58538171 MsG0180003217.01.T01:intron 20.0%
!! ATAGTAACATTGAATGAAAT+TGG - Chr1:58541482-58541501 None:intergenic 20.0%
!! ATTACACAGAAAATTGTTTA+AGG - Chr1:58536998-58537017 None:intergenic 20.0%
!! CATATAATAACTTTCCATAA+AGG - Chr1:58537569-58537588 None:intergenic 20.0%
!! GAAAATGAATTTAATTAACC+TGG + Chr1:58535787-58535806 MsG0180003217.01.T01:intron 20.0%
!! GAAAGTTATTATATGTTATG+TGG + Chr1:58537574-58537593 MsG0180003217.01.T01:intron 20.0%
!! GGTGATTGTATATATATATT+AGG + Chr1:58537655-58537674 MsG0180003217.01.T01:intron 20.0%
!! GTGAATATTATTAGGTTAAA+CGG - Chr1:58539950-58539969 None:intergenic 20.0%
!! TAAATCGAATATCATGATAT+AGG + Chr1:58539024-58539043 MsG0180003217.01.T01:intron 20.0%
!! TAACTTATAGATAAGAAGAA+TGG - Chr1:58535715-58535734 None:intergenic 20.0%
!! TATATGTGACAAGTATTTAA+AGG + Chr1:58535570-58535589 MsG0180003217.01.T01:intron 20.0%
!! TGTATATATATATTAGGTGA+TGG + Chr1:58537661-58537680 MsG0180003217.01.T01:intron 20.0%
!! TTATAAAGTTACATCATCAT+TGG + Chr1:58536103-58536122 MsG0180003217.01.T01:intron 20.0%
!! TTGATTGCTAATTGTAATTA+TGG + Chr1:58537951-58537970 MsG0180003217.01.T01:intron 20.0%
!! TTGTTATCATCAAAACTTTA+AGG - Chr1:58536026-58536045 None:intergenic 20.0%
!!! AAAGAAAACTAACTTTTGTT+AGG - Chr1:58538659-58538678 None:intergenic 20.0%
!!! AACACTTGAACAATTTTAAA+GGG + Chr1:58541294-58541313 MsG0180003217.01.T01:CDS 20.0%
!!! ACTTTTTAAGAGTTATTCAA+GGG + Chr1:58540815-58540834 MsG0180003217.01.T01:intron 20.0%
!!! ATCTTTTAGGTCATAAATTT+AGG - Chr1:58538783-58538802 None:intergenic 20.0%
!!! ATTTCAAATTGTTTCTTCAT+AGG + Chr1:58536662-58536681 MsG0180003217.01.T01:intron 20.0%
!!! CTTACATCAAAATCAATTTT+AGG - Chr1:58538862-58538881 None:intergenic 20.0%
!!! CTTTTTTTTGATAATGACAA+AGG + Chr1:58535542-58535561 MsG0180003217.01.T01:intron 20.0%
!!! GTTATTTGTTATTTGAGAAT+TGG + Chr1:58538380-58538399 MsG0180003217.01.T01:intron 20.0%
!!! TACTTTTTAAGAGTTATTCA+AGG + Chr1:58540814-58540833 MsG0180003217.01.T01:intron 20.0%
!!! TATTGTTTGATTTCATTGAT+TGG - Chr1:58539339-58539358 None:intergenic 20.0%
!!! TTAAAGTTTTGATGATAACA+AGG + Chr1:58536025-58536044 MsG0180003217.01.T01:intron 20.0%
!!! TTGTTAATTATTGATTGACA+AGG + Chr1:58537987-58538006 MsG0180003217.01.T01:intron 20.0%
!!! TTTTTTTGATAATGACAAAG+GGG + Chr1:58535544-58535563 MsG0180003217.01.T01:intron 20.0%
! AAAGAAAGAAAGAAAAACCT+AGG - Chr1:58541547-58541566 None:intergenic 25.0%
! AAAGTTGTTAATACACCTTA+AGG - Chr1:58539820-58539839 None:intergenic 25.0%
! AAGAAAAAATCTTGTATGAG+TGG + Chr1:58541380-58541399 MsG0180003217.01.T01:CDS 25.0%
! AAGATTATCCTATGAAAATC+TGG - Chr1:58540095-58540114 None:intergenic 25.0%
! AAGTAGTTAAATACACCTTA+AGG - Chr1:58539675-58539694 None:intergenic 25.0%
! AATCTAACACTTTCATCTTT+AGG - Chr1:58533544-58533563 None:intergenic 25.0%
! AATTGATTGTGAATCCTTTA+TGG + Chr1:58537552-58537571 MsG0180003217.01.T01:intron 25.0%
! AATTTCAAATGCCATTAATG+GGG - Chr1:58535603-58535622 None:intergenic 25.0%
! ACAAACAAAAAGAAAACACA+AGG - Chr1:58535312-58535331 None:intergenic 25.0%
! ACACCTTAATAAAAACTAGT+GGG + Chr1:58539862-58539881 MsG0180003217.01.T01:intron 25.0%
! AGATTTATGTGGAGAAATAT+TGG + Chr1:58540259-58540278 MsG0180003217.01.T01:CDS 25.0%
! AGGTCAAAACTAAAATGTTT+GGG - Chr1:58538763-58538782 None:intergenic 25.0%
! AGTATTTCAAGATGCTAAAT+GGG + Chr1:58532849-58532868 MsG0180003217.01.T01:CDS 25.0%
! AGTGTACGGTAATTAAATTT+AGG + Chr1:58539385-58539404 MsG0180003217.01.T01:intron 25.0%
! ATAATGATATTGAATGATCG+TGG + Chr1:58538055-58538074 MsG0180003217.01.T01:intron 25.0%
! ATATCCATATTTCAGAAACT+TGG - Chr1:58540396-58540415 None:intergenic 25.0%
! ATATTCCTTAAATTCCCAAA+CGG + Chr1:58540300-58540319 MsG0180003217.01.T01:CDS 25.0%
! ATCATCAACAGATTTGATAT+TGG - Chr1:58540498-58540517 None:intergenic 25.0%
! ATCTAACACTTTCATCTTTA+GGG - Chr1:58533543-58533562 None:intergenic 25.0%
! CAAACAAAAAGAAAACACAA+GGG - Chr1:58535311-58535330 None:intergenic 25.0%
! CATAGAGAAATAAAACAAGA+TGG - Chr1:58535370-58535389 None:intergenic 25.0%
! CTCTTAACTTTCAAATTCTT+AGG + Chr1:58540416-58540435 MsG0180003217.01.T01:intron 25.0%
! GAAGATGAAAGATATAATCA+AGG - Chr1:58538131-58538150 None:intergenic 25.0%
! GATTGCATATATACAAGTAT+TGG + Chr1:58537696-58537715 MsG0180003217.01.T01:intron 25.0%
! GTGTTCAACAAGAAATATTT+GGG + Chr1:58540322-58540341 MsG0180003217.01.T01:intron 25.0%
! TAATATTTGTTCAAGTGTAC+AGG + Chr1:58536073-58536092 MsG0180003217.01.T01:intron 25.0%
! TAATTACCGTACACTTTATT+GGG - Chr1:58539380-58539399 None:intergenic 25.0%
! TAGGTCAAAACTAAAATGTT+TGG - Chr1:58538764-58538783 None:intergenic 25.0%
! TAGGTTCTACAAAGATAAAT+TGG + Chr1:58534169-58534188 MsG0180003217.01.T01:CDS 25.0%
! TATCTATAATGGTGTATACT+TGG - Chr1:58539488-58539507 None:intergenic 25.0%
! TATTATTAGGTTAAACGGAT+TGG - Chr1:58539945-58539964 None:intergenic 25.0%
! TATTCCTCAAAAAGAAGAAA+AGG + Chr1:58533898-58533917 MsG0180003217.01.T01:CDS 25.0%
! TATTTCTCCACATAAATCTT+AGG - Chr1:58540258-58540277 None:intergenic 25.0%
! TGCTCCTAATAAAGAAAAAA+AGG + Chr1:58533794-58533813 MsG0180003217.01.T01:intron 25.0%
! TGTTCTCTTGAAAATATACT+TGG - Chr1:58541278-58541297 None:intergenic 25.0%
! TTAACTTTCAAATTCTTAGG+TGG + Chr1:58540419-58540438 MsG0180003217.01.T01:intron 25.0%
! TTAATTACCGTACACTTTAT+TGG - Chr1:58539381-58539400 None:intergenic 25.0%
! TTAGTAGATGTATGATTATG+CGG - Chr1:58539135-58539154 None:intergenic 25.0%
! TTCACTAATATGGAATCAAT+TGG - Chr1:58539427-58539446 None:intergenic 25.0%
! TTGGGAATTTAAGGAATATA+GGG - Chr1:58540299-58540318 None:intergenic 25.0%
! TTGTTTGTCATCATCAAAAA+GGG + Chr1:58535966-58535985 MsG0180003217.01.T01:intron 25.0%
! TTTGGGAATTTAAGGAATAT+AGG - Chr1:58540300-58540319 None:intergenic 25.0%
! TTTGTTTGTCATCATCAAAA+AGG + Chr1:58535965-58535984 MsG0180003217.01.T01:intron 25.0%
!! AACATATTCCAGATTTTCAT+AGG + Chr1:58540084-58540103 MsG0180003217.01.T01:intron 25.0%
!! AACTACATGTTATGTGATTT+TGG + Chr1:58537624-58537643 MsG0180003217.01.T01:intron 25.0%
!! AATATCAAATCTGTTGATGA+TGG + Chr1:58540497-58540516 MsG0180003217.01.T01:CDS 25.0%
!! ACACACATTCTAAAAATAAG+TGG - Chr1:58539783-58539802 None:intergenic 25.0%
!! ACACCTTCTAAAAAATAAGT+GGG + Chr1:58539717-58539736 MsG0180003217.01.T01:intron 25.0%
!! CACACATTCTAAAAATAAGT+GGG - Chr1:58539782-58539801 None:intergenic 25.0%
!! CATTTGATAGCTTAGAAATA+AGG + Chr1:58533001-58533020 MsG0180003217.01.T01:intron 25.0%
!! CTAATTAACAAGTTGACTTT+GGG - Chr1:58535915-58535934 None:intergenic 25.0%
!! GAACACTTGAACAATTTTAA+AGG + Chr1:58541293-58541312 MsG0180003217.01.T01:CDS 25.0%
!! GAAGAAGTGTGAATATTATT+AGG - Chr1:58539958-58539977 None:intergenic 25.0%
!! TAAACCATTATTTGAAACAG+TGG + Chr1:58541249-58541268 MsG0180003217.01.T01:intron 25.0%
!! TAATTAACAAGTTGACTTTG+GGG - Chr1:58535914-58535933 None:intergenic 25.0%
!! TCTAATTAACAAGTTGACTT+TGG - Chr1:58535916-58535935 None:intergenic 25.0%
!! TTGATTTCATTGATTGGTAT+GGG - Chr1:58539333-58539352 None:intergenic 25.0%
!! TTTGATTTCATTGATTGGTA+TGG - Chr1:58539334-58539353 None:intergenic 25.0%
!! TTTTCTACTCATCATACATT+TGG + Chr1:58539460-58539479 MsG0180003217.01.T01:intron 25.0%
!!! CTGTGTAATTTTGTTTAGTT+AGG + Chr1:58537009-58537028 MsG0180003217.01.T01:intron 25.0%
!!! GTTTATTTGACTTTGTGTTT+TGG + Chr1:58538348-58538367 MsG0180003217.01.T01:intron 25.0%
!!! TCATTTTTGAAAATTTGTGG+TGG - Chr1:58539064-58539083 None:intergenic 25.0%
!!! TCTGCCTTTTTTTCTTTATT+AGG - Chr1:58533801-58533820 None:intergenic 25.0%
!!! TGAGTTTTCTCTCTTTATTT+TGG + Chr1:58540703-58540722 MsG0180003217.01.T01:intron 25.0%
!!! TGTCTTTTTTTTTCACCATA+TGG - Chr1:58539231-58539250 None:intergenic 25.0%
!!! TTGCAATTTTTTTGTCTGAA+AGG + Chr1:58540842-58540861 MsG0180003217.01.T01:intron 25.0%
!!! TTTTTTGATAATGACAAAGG+GGG + Chr1:58535545-58535564 MsG0180003217.01.T01:intron 25.0%
AAAAAATCTTGTATGAGTGG+TGG + Chr1:58541383-58541402 MsG0180003217.01.T01:CDS 30.0%
AAAACCTAGGAATTTCTTTG+AGG - Chr1:58541534-58541553 None:intergenic 30.0%
AAACACAAACAAAGGATTAG+TGG + Chr1:58536449-58536468 MsG0180003217.01.T01:intron 30.0%
AAAGAAAGGGAAAATGATCA+TGG + Chr1:58532963-58532982 MsG0180003217.01.T01:intron 30.0%
AACACTTGATATACAATCAG+AGG - Chr1:58536972-58536991 None:intergenic 30.0%
AAGTAATATATCCAGATTCC+AGG - Chr1:58534851-58534870 None:intergenic 30.0%
AAGTATGAAGTAAACATGGA+AGG + Chr1:58532800-58532819 MsG0180003217.01.T01:CDS 30.0%
AATTAACCTGGATAGAACTT+AGG + Chr1:58535799-58535818 MsG0180003217.01.T01:intron 30.0%
AATTTACTTCATGGCTATTC+TGG + Chr1:58533284-58533303 MsG0180003217.01.T01:intron 30.0%
ACTGTTACACAAAAAAGACA+CGG + Chr1:58539919-58539938 MsG0180003217.01.T01:intron 30.0%
ACTTACCAAGTAATAACCAT+TGG - Chr1:58541179-58541198 None:intergenic 30.0%
AGATGATCCATTACATATCT+GGG - Chr1:58533323-58533342 None:intergenic 30.0%
ATAGCCAACTTTCACTAATA+TGG - Chr1:58539437-58539456 None:intergenic 30.0%
ATATGTGTATGATACACTTG+TGG + Chr1:58538019-58538038 MsG0180003217.01.T01:intron 30.0%
ATATGTTATGTGGAGATGAT+TGG + Chr1:58537584-58537603 MsG0180003217.01.T01:intron 30.0%
ATCCAACTAGACATACAATT+AGG + Chr1:58539255-58539274 MsG0180003217.01.T01:intron 30.0%
ATGTGAATTGTGAGAATACA+AGG + Chr1:58537428-58537447 MsG0180003217.01.T01:intron 30.0%
ATTAACCTGGATAGAACTTA+GGG + Chr1:58535800-58535819 MsG0180003217.01.T01:intron 30.0%
CAAGATTATGCAATTGACTA+AGG - Chr1:58534890-58534909 None:intergenic 30.0%
CAAGTTCAAAGAACTAGAAA+TGG + Chr1:58540629-58540648 MsG0180003217.01.T01:CDS 30.0%
CACACCTTAATAAAAACTAG+TGG + Chr1:58539861-58539880 MsG0180003217.01.T01:intron 30.0%
CATATATGTTCCTTTGGATA+AGG + Chr1:58536634-58536653 MsG0180003217.01.T01:intron 30.0%
CATGTTATATAACATAGCAG+CGG - Chr1:58538462-58538481 None:intergenic 30.0%
CTCAAAAAGAAGAAAAGGTA+AGG + Chr1:58533903-58533922 MsG0180003217.01.T01:intron 30.0%
GAGTATTTCAAGATGCTAAA+TGG + Chr1:58532848-58532867 MsG0180003217.01.T01:CDS 30.0%
GATTCCATATTAGTGAAAGT+TGG + Chr1:58539430-58539449 MsG0180003217.01.T01:intron 30.0%
GGTCAAAACTAAAATGTTTG+GGG - Chr1:58538762-58538781 None:intergenic 30.0%
GGTGTTCAACAAGAAATATT+TGG + Chr1:58540321-58540340 MsG0180003217.01.T01:intron 30.0%
GTATCCACTGTTTCAAATAA+TGG - Chr1:58541256-58541275 None:intergenic 30.0%
GTTCATAGCTTATACCAATA+AGG - Chr1:58535653-58535672 None:intergenic 30.0%
TAAACTTCCCAGATATGTAA+TGG + Chr1:58533313-58533332 MsG0180003217.01.T01:intron 30.0%
TAATCAGAATCTAAATGCAG+CGG - Chr1:58537280-58537299 None:intergenic 30.0%
TAGTCAATTGCATAATCTTG+TGG + Chr1:58534890-58534909 MsG0180003217.01.T01:intron 30.0%
TATGTGGAGAAATATTGGAA+AGG + Chr1:58540264-58540283 MsG0180003217.01.T01:CDS 30.0%
TCTAAGCTATCAAATGATGT+AGG - Chr1:58532997-58533016 None:intergenic 30.0%
TCTGAATCTTTATCAAGGAA+GGG + Chr1:58533405-58533424 MsG0180003217.01.T01:intron 30.0%
TGAAATGACATGGTAAACTA+AGG - Chr1:58540065-58540084 None:intergenic 30.0%
TGACTCTACTTGAACTATTA+AGG - Chr1:58532756-58532775 None:intergenic 30.0%
TGATTTCCAAATCTTGAACA+GGG - Chr1:58534785-58534804 None:intergenic 30.0%
TGGAATATGTTGAAATGACA+TGG - Chr1:58540075-58540094 None:intergenic 30.0%
TGTTTGTCATCATCAAAAAG+GGG + Chr1:58535967-58535986 MsG0180003217.01.T01:intron 30.0%
TTAAGGCTTAAAGAAGTGAT+AGG - Chr1:58540019-58540038 None:intergenic 30.0%
TTAGTTAGTGAGTGAGTATT+GGG - Chr1:58540042-58540061 None:intergenic 30.0%
TTCAACAAGAAATATTTGGG+TGG + Chr1:58540325-58540344 MsG0180003217.01.T01:intron 30.0%
TTCCTAATTGTATGTCTAGT+TGG - Chr1:58539260-58539279 None:intergenic 30.0%
TTGAATTTCTTTGTTGCAGA+GGG + Chr1:58540230-58540249 MsG0180003217.01.T01:intron 30.0%
TTTACCGCTTATTAGGAATA+GGG + Chr1:58538554-58538573 MsG0180003217.01.T01:intron 30.0%
TTTGAATTTCTTTGTTGCAG+AGG + Chr1:58540229-58540248 MsG0180003217.01.T01:intron 30.0%
! ACTTTCATGAACTTCTTTTG+TGG - Chr1:58540564-58540583 None:intergenic 30.0%
! ATGTTATGTGATTTTGGATG+TGG + Chr1:58537630-58537649 MsG0180003217.01.T01:intron 30.0%
! CAAGAAGTATGAAGTAAACA+TGG + Chr1:58532796-58532815 MsG0180003217.01.T01:CDS 30.0%
! CACACCTTCTAAAAAATAAG+TGG + Chr1:58539716-58539735 MsG0180003217.01.T01:intron 30.0%
! CTTACCTTTTCTTCTTTTTG+AGG - Chr1:58533905-58533924 None:intergenic 30.0%
! CTTAGGTGGATCATATTTTA+AGG + Chr1:58540433-58540452 MsG0180003217.01.T01:intron 30.0%
! GCAAATTTGAGATGATTCAA+AGG + Chr1:58541453-58541472 MsG0180003217.01.T01:CDS 30.0%
! TAATCCGTTTCTAAGAAGAA+AGG - Chr1:58535105-58535124 None:intergenic 30.0%
! TTTTAACATTGAGACTTGAG+AGG + Chr1:58539985-58540004 MsG0180003217.01.T01:intron 30.0%
! TTTTACCGCTTATTAGGAAT+AGG + Chr1:58538553-58538572 MsG0180003217.01.T01:intron 30.0%
! TTTTAGCAACATTCACCTTA+AGG + Chr1:58539802-58539821 MsG0180003217.01.T01:intron 30.0%
! TTTTCACCATATGGTTAGAT+TGG - Chr1:58539222-58539241 None:intergenic 30.0%
!! AATGATGTGATTTTGAGAGA+CGG + Chr1:58537504-58537523 MsG0180003217.01.T01:intron 30.0%
!! TTCTTCTTTTTGAGGAATAG+AGG - Chr1:58533897-58533916 None:intergenic 30.0%
!! TTTGCCAAGTTTCTGAAATA+TGG + Chr1:58540389-58540408 MsG0180003217.01.T01:intron 30.0%
!!! ACACCCACTAGTTTTTATTA+AGG - Chr1:58539868-58539887 None:intergenic 30.0%
!!! ACACCCACTTATTTTTTAGA+AGG - Chr1:58539723-58539742 None:intergenic 30.0%
!!! AGGAATTGTGTTTTGACTAT+TGG - Chr1:58539304-58539323 None:intergenic 30.0%
!!! ATCAGTGTGTTCAGTTTTTT+AGG + Chr1:58537331-58537350 MsG0180003217.01.T01:intron 30.0%
!!! GGAATTGTGTTTTGACTATT+GGG - Chr1:58539303-58539322 None:intergenic 30.0%
AACACCCTATTCCTAATAAG+CGG - Chr1:58538561-58538580 None:intergenic 35.0%
AACATATGTGAACTTGGTCA+AGG + Chr1:58532874-58532893 MsG0180003217.01.T01:CDS 35.0%
AAGAAAAGGTAAGGCAGATT+TGG + Chr1:58533912-58533931 MsG0180003217.01.T01:intron 35.0%
AAGCTTCTGTCAGAAGTTAA+TGG + Chr1:58535023-58535042 MsG0180003217.01.T01:intron 35.0%
AAGGTGAGAAAAACACAAGA+AGG - Chr1:58537393-58537412 None:intergenic 35.0%
AAGTGATGAAGTGAGTGATA+AGG + Chr1:58540580-58540599 MsG0180003217.01.T01:CDS 35.0%
AATAGTTCAAGTAGAGTCAC+CGG + Chr1:58532757-58532776 MsG0180003217.01.T01:CDS 35.0%
AATATTTGGGTGGAGAGTAA+TGG + Chr1:58540335-58540354 MsG0180003217.01.T01:intron 35.0%
ACAAATCAGATACAGACTCA+TGG - Chr1:58536939-58536958 None:intergenic 35.0%
ACGACACAAAGCAATTATAC+TGG - Chr1:58537228-58537247 None:intergenic 35.0%
ACGTTATAGCTAAAGCTTGT+AGG + Chr1:58533061-58533080 MsG0180003217.01.T01:intron 35.0%
ACTACCCAACAAAAATTCTC+AGG + Chr1:58540680-58540699 MsG0180003217.01.T01:CDS 35.0%
ACTCCCACATAAAAACTAGT+GGG - Chr1:58539636-58539655 None:intergenic 35.0%
AGAAGAAAACAAGTACCCTA+TGG + Chr1:58533372-58533391 MsG0180003217.01.T01:intron 35.0%
AGACAAATCTACCTCAGAAA+AGG + Chr1:58534468-58534487 MsG0180003217.01.T01:CDS 35.0%
AGGTGAGAAAAACACAAGAA+GGG - Chr1:58537392-58537411 None:intergenic 35.0%
AGTGATGAAGTGAGTGATAA+GGG + Chr1:58540581-58540600 MsG0180003217.01.T01:CDS 35.0%
ATAATCTTGTGGATCAACGA+AGG + Chr1:58534901-58534920 MsG0180003217.01.T01:intron 35.0%
ATCAAGAGATGAAAAGCTCA+AGG + Chr1:58534126-58534145 MsG0180003217.01.T01:CDS 35.0%
ATCAGATTCAGAACTAGTTC+TGG - Chr1:58533772-58533791 None:intergenic 35.0%
ATCCAAAGGAACATATATGC+AGG - Chr1:58536633-58536652 None:intergenic 35.0%
ATGTTCCTTTGGATAAGGAA+TGG + Chr1:58536639-58536658 MsG0180003217.01.T01:intron 35.0%
ATTCACATATGTGTGCAGTA+CGG - Chr1:58537416-58537435 None:intergenic 35.0%
ATTGTGAGAATACAAGGCAT+AGG + Chr1:58537434-58537453 MsG0180003217.01.T01:intron 35.0%
ATTTCTTGTTGAACACCGTT+TGG - Chr1:58540318-58540337 None:intergenic 35.0%
CAAATCAGGCAAAAGATCAT+TGG + Chr1:58536693-58536712 MsG0180003217.01.T01:intron 35.0%
CGATTAAAGCTTCAGATGTT+GGG - Chr1:58541102-58541121 None:intergenic 35.0%
CTCGATAGTGCTTTCATTTA+TGG - Chr1:58533354-58533373 None:intergenic 35.0%
CTGAGCTAATTGAAAGCTTA+AGG + Chr1:58534980-58534999 MsG0180003217.01.T01:intron 35.0%
CTGATCTTATTCAGACAGAA+AGG + Chr1:58534084-58534103 MsG0180003217.01.T01:intron 35.0%
CTGATTTCCAAATCTTGAAC+AGG - Chr1:58534786-58534805 None:intergenic 35.0%
CTGGAGTTCTTAAAAAGACA+AGG + Chr1:58533430-58533449 MsG0180003217.01.T01:intron 35.0%
CTTAAAGACTATCAGACTCA+GGG + Chr1:58535840-58535859 MsG0180003217.01.T01:intron 35.0%
GAAATCCATTCCTTATCCAA+AGG - Chr1:58536647-58536666 None:intergenic 35.0%
GAAGAAGATTGAAGAAATGG+AGG + Chr1:58535249-58535268 MsG0180003217.01.T01:intron 35.0%
GAAGCTAGCAATTTACTTCA+TGG + Chr1:58533275-58533294 MsG0180003217.01.T01:intron 35.0%
GAATTGCATTGAGATGTGTT+TGG + Chr1:58537925-58537944 MsG0180003217.01.T01:intron 35.0%
GAGATGATCCATTACATATC+TGG - Chr1:58533324-58533343 None:intergenic 35.0%
GATTCCAAGAAATAGTCAGA+AGG + Chr1:58533100-58533119 MsG0180003217.01.T01:intron 35.0%
GCAGAAGAAGATTGAAGAAA+TGG + Chr1:58535246-58535265 MsG0180003217.01.T01:intron 35.0%
GGATTCGAAAACACAAACAA+AGG + Chr1:58536441-58536460 MsG0180003217.01.T01:intron 35.0%
GGTCTTCACTCTTTATATAG+AGG - Chr1:58536782-58536801 None:intergenic 35.0%
GTCTGAATCTTTATCAAGGA+AGG + Chr1:58533404-58533423 MsG0180003217.01.T01:intron 35.0%
GTTAGTTAGTGAGTGAGTAT+TGG - Chr1:58540043-58540062 None:intergenic 35.0%
GTTTGTGTGTTTGAAGATGA+AGG - Chr1:58534738-58534757 None:intergenic 35.0%
TAAAGGGACTGCAACAATAA+GGG + Chr1:58541310-58541329 MsG0180003217.01.T01:CDS 35.0%
TACTCATAGTGAAATCTCCT+TGG + Chr1:58537160-58537179 MsG0180003217.01.T01:intron 35.0%
TAGACACTTGCATGAAAAAG+AGG - Chr1:58538292-58538311 None:intergenic 35.0%
TATAAGCTATGAACGAACGA+AGG + Chr1:58535659-58535678 MsG0180003217.01.T01:intron 35.0%
TATAGCTAAAGCTTGTAGGA+TGG + Chr1:58533065-58533084 MsG0180003217.01.T01:intron 35.0%
TCAACCTCAAAGAAATTCCT+AGG + Chr1:58541527-58541546 MsG0180003217.01.T01:CDS 35.0%
TCATCTCCCAATAAAGTGTA+CGG + Chr1:58539371-58539390 MsG0180003217.01.T01:intron 35.0%
TCATGCAAGTGTCTAGATTA+GGG + Chr1:58538297-58538316 MsG0180003217.01.T01:intron 35.0%
TCGATTAAAGCTTCAGATGT+TGG - Chr1:58541103-58541122 None:intergenic 35.0%
TCTTGCATTACCAATTCTCT+AGG - Chr1:58536803-58536822 None:intergenic 35.0%
TGAACTATTAAGGATTCCCA+TGG - Chr1:58532746-58532765 None:intergenic 35.0%
TGAAGAAATGGAGAAAGAAG+AGG + Chr1:58533965-58533984 MsG0180003217.01.T01:intron 35.0%
TGAAGCTTAGATGATTCTGA+AGG + Chr1:58536156-58536175 MsG0180003217.01.T01:intron 35.0%
TGCTGTCTGAATCTTTATCA+AGG + Chr1:58533400-58533419 MsG0180003217.01.T01:intron 35.0%
TGGAGAGTAATGGTGATATT+TGG + Chr1:58540345-58540364 MsG0180003217.01.T01:intron 35.0%
TGGCAAAAGAAAAGTGAGTA+TGG + Chr1:58540649-58540668 MsG0180003217.01.T01:CDS 35.0%
TGTATGTTAGCAACTCCTAT+AGG - Chr1:58539759-58539778 None:intergenic 35.0%
TTAAAGACTATCAGACTCAG+GGG + Chr1:58535841-58535860 MsG0180003217.01.T01:intron 35.0%
TTAAAGGGACTGCAACAATA+AGG + Chr1:58541309-58541328 MsG0180003217.01.T01:CDS 35.0%
TTAACCTGGATAGAACTTAG+GGG + Chr1:58535801-58535820 MsG0180003217.01.T01:intron 35.0%
TTACGCCAATGGTTATTACT+TGG + Chr1:58541171-58541190 MsG0180003217.01.T01:CDS 35.0%
TTCATGCAAGTGTCTAGATT+AGG + Chr1:58538296-58538315 MsG0180003217.01.T01:intron 35.0%
TTGACCAAGTTCACATATGT+TGG - Chr1:58532875-58532894 None:intergenic 35.0%
TTGATTGTGTTCTTGAGCAA+AGG + Chr1:58537067-58537086 MsG0180003217.01.T01:intron 35.0%
TTGTGAATCTCCATTTCAGA+AGG - Chr1:58533183-58533202 None:intergenic 35.0%
TTTCTTGTTGAACACCGTTT+GGG - Chr1:58540317-58540336 None:intergenic 35.0%
TTTGAAAATGCTCCAGAAGA+GGG + Chr1:58534255-58534274 MsG0180003217.01.T01:intron 35.0%
! ACTCACCTGAGAATTTTTGT+TGG - Chr1:58540688-58540707 None:intergenic 35.0%
! ACTTTCTTGACCTCTTTTTG+TGG - Chr1:58540531-58540550 None:intergenic 35.0%
! AGAAATAAGGTCTGAAGTGA+TGG + Chr1:58533014-58533033 MsG0180003217.01.T01:intron 35.0%
! AGAGTCACTTTCCTTAAAGA+TGG - Chr1:58533604-58533623 None:intergenic 35.0%
! CAATGATCTTTTGCCTGATT+TGG - Chr1:58536695-58536714 None:intergenic 35.0%
! CCTTTTTCCTTGATAGAAAC+AGG - Chr1:58533851-58533870 None:intergenic 35.0%
! CTCACCTGAGAATTTTTGTT+GGG - Chr1:58540687-58540706 None:intergenic 35.0%
! GAAATAAGGTCTGAAGTGAT+GGG + Chr1:58533015-58533034 MsG0180003217.01.T01:intron 35.0%
! GAGTCACTTTCCTTAAAGAT+GGG - Chr1:58533603-58533622 None:intergenic 35.0%
! GTGGATTTTATATCCAATGG+AGG + Chr1:58537799-58537818 MsG0180003217.01.T01:intron 35.0%
! GTTTGTGTTTTCGAATCCAA+TGG - Chr1:58536439-58536458 None:intergenic 35.0%
! TAAGCTTCTGAAGAAACAGA+TGG + Chr1:58535149-58535168 MsG0180003217.01.T01:intron 35.0%
! TATGTGATTTTGGATGTGGT+TGG + Chr1:58537634-58537653 MsG0180003217.01.T01:intron 35.0%
! TCTGAAATGGAGATTCACAA+CGG + Chr1:58533183-58533202 MsG0180003217.01.T01:intron 35.0%
! TCTGAGGTAGATTTGTCTAA+AGG - Chr1:58534466-58534485 None:intergenic 35.0%
! TCTTCCTTCTGACTATTTCT+TGG - Chr1:58533107-58533126 None:intergenic 35.0%
! TGAAAATTTGTGGTGGAGTT+GGG - Chr1:58539057-58539076 None:intergenic 35.0%
! TGAGAATTTTTGTTGGGTAG+TGG - Chr1:58540681-58540700 None:intergenic 35.0%
! TTGAAAATTTGTGGTGGAGT+TGG - Chr1:58539058-58539077 None:intergenic 35.0%
! TTTTAGCAAGCTACACCTTA+AGG + Chr1:58539657-58539676 MsG0180003217.01.T01:intron 35.0%
! TTTTGCAACGGTCATTTCAA+AGG + Chr1:58536474-58536493 MsG0180003217.01.T01:intron 35.0%
!! AAGACAGAAGTGTCTTCTAT+TGG - Chr1:58534409-58534428 None:intergenic 35.0%
!! AAGGTACTACACACTCTTTT+GGG + Chr1:58533138-58533157 MsG0180003217.01.T01:intron 35.0%
!! CAATAAGGGTTGGTAAAGAA+AGG + Chr1:58541324-58541343 MsG0180003217.01.T01:CDS 35.0%
!! CCTGTTTCTATCAAGGAAAA+AGG + Chr1:58533848-58533867 MsG0180003217.01.T01:CDS 35.0%
!! CGTCATCCATTTTGATGTAT+CGG + Chr1:58538589-58538608 MsG0180003217.01.T01:intron 35.0%
!! GGATTAGTGGAATTTTGCAA+CGG + Chr1:58536462-58536481 MsG0180003217.01.T01:intron 35.0%
!! GGTCATTTCAAAGGTTTTGA+AGG + Chr1:58536483-58536502 MsG0180003217.01.T01:intron 35.0%
!! GTCATCCATTTTGATGTATC+GGG + Chr1:58538590-58538609 MsG0180003217.01.T01:intron 35.0%
!! TACAAGTATTGGTGATTGTG+AGG + Chr1:58537707-58537726 MsG0180003217.01.T01:intron 35.0%
!! TCATCCATTTTGATGTATCG+GGG + Chr1:58538591-58538610 MsG0180003217.01.T01:intron 35.0%
!! TGATGTTTGAGTGTTGAGTT+GGG - Chr1:58534593-58534612 None:intergenic 35.0%
!! TGCTAAACCTGTTTCTATCA+AGG + Chr1:58533841-58533860 MsG0180003217.01.T01:CDS 35.0%
!! TTGATGTTTGAGTGTTGAGT+TGG - Chr1:58534594-58534613 None:intergenic 35.0%
!! TTGATTGGTATGGGTTTTGA+AGG - Chr1:58539324-58539343 None:intergenic 35.0%
!! TTTTGAAAATGCTCCAGAAG+AGG + Chr1:58534254-58534273 MsG0180003217.01.T01:intron 35.0%
!!! ACACCCACTAGTTTTTATGT+GGG + Chr1:58539630-58539649 MsG0180003217.01.T01:intron 35.0%
!!! GTGGTGGATTTTATATCCAA+TGG + Chr1:58537796-58537815 MsG0180003217.01.T01:intron 35.0%
!!! TGACTTTGTGTTTTGGAGTT+GGG + Chr1:58538355-58538374 MsG0180003217.01.T01:intron 35.0%
!!! TGTTTTGACTATTGGGTCTA+GGG - Chr1:58539296-58539315 None:intergenic 35.0%
!!! TTGACTTTGTGTTTTGGAGT+TGG + Chr1:58538354-58538373 MsG0180003217.01.T01:intron 35.0%
AAACAAGCTGGGTCAAAGAA+AGG + Chr1:58532949-58532968 MsG0180003217.01.T01:intron 40.0%
AAAGGAAAGATGCAGAAGGT+TGG + Chr1:58533866-58533885 MsG0180003217.01.T01:CDS 40.0%
AAAGTCGTAAGCAAACAAGC+TGG + Chr1:58532937-58532956 MsG0180003217.01.T01:intron 40.0%
AACAAGCTGGGTCAAAGAAA+GGG + Chr1:58532950-58532969 MsG0180003217.01.T01:intron 40.0%
AACAGGGTTAGGAATTGGAA+TGG - Chr1:58534769-58534788 None:intergenic 40.0%
AACATCGTAATCACCTCCAT+TGG - Chr1:58537815-58537834 None:intergenic 40.0%
AACTCCTATAGGCATTTGCT+AGG - Chr1:58539748-58539767 None:intergenic 40.0%
AAGTCGTAAGCAAACAAGCT+GGG + Chr1:58532938-58532957 MsG0180003217.01.T01:intron 40.0%
AATCTTGTATGAGTGGTGGT+TGG + Chr1:58541387-58541406 MsG0180003217.01.T01:CDS 40.0%
ACAAGATGGTTTCAGAAGCA+AGG - Chr1:58535356-58535375 None:intergenic 40.0%
ACACATAGACCCAATACAAC+CGG + Chr1:58539194-58539213 MsG0180003217.01.T01:intron 40.0%
ACTGCTGAACTGAGATAATC+AGG + Chr1:58533568-58533587 MsG0180003217.01.T01:intron 40.0%
AGAGTGAAGACCTAGAGAAT+TGG + Chr1:58536790-58536809 MsG0180003217.01.T01:intron 40.0%
AGATTGGAACCGGTTGTATT+GGG - Chr1:58539206-58539225 None:intergenic 40.0%
AGGTAGTAACAAAGTAGCCA+TGG + Chr1:58541057-58541076 MsG0180003217.01.T01:intron 40.0%
ATCTGAATTACCTGATCTGC+AGG - Chr1:58534337-58534356 None:intergenic 40.0%
ATGCAGAACAATTTCAGCAG+AGG - Chr1:58536867-58536886 None:intergenic 40.0%
ATGGTTGAGATGACTCCATA+AGG + Chr1:58534037-58534056 MsG0180003217.01.T01:intron 40.0%
ATGTCACATACTTACGCCAA+TGG + Chr1:58541160-58541179 MsG0180003217.01.T01:CDS 40.0%
ATTACTTGACCAGAGAAGCA+AGG + Chr1:58535121-58535140 MsG0180003217.01.T01:intron 40.0%
CACTCCCACATAAAAACTAG+TGG - Chr1:58539637-58539656 None:intergenic 40.0%
CATAGGACAACAACCAAATC+AGG + Chr1:58536679-58536698 MsG0180003217.01.T01:intron 40.0%
CATCAAAAAGGGGAGATTGT+TGG + Chr1:58535977-58535996 MsG0180003217.01.T01:intron 40.0%
CATTCCTATAACCATCACTG+AGG + Chr1:58533038-58533057 MsG0180003217.01.T01:intron 40.0%
CCAGCCTTTCTTCTTAGAAA+CGG + Chr1:58535098-58535117 MsG0180003217.01.T01:intron 40.0%
CCATATGGTTAGATTGGAAC+CGG - Chr1:58539216-58539235 None:intergenic 40.0%
CCTGAGTCTGATAGTCTTTA+AGG - Chr1:58535842-58535861 None:intergenic 40.0%
CCTTAAAGACTATCAGACTC+AGG + Chr1:58535839-58535858 MsG0180003217.01.T01:intron 40.0%
CTATCACAATCTTCCATCCA+AGG - Chr1:58534152-58534171 None:intergenic 40.0%
CTGCTGAACTGAGATAATCA+GGG + Chr1:58533569-58533588 MsG0180003217.01.T01:intron 40.0%
CTTGGATGGAAGATTGTGAT+AGG + Chr1:58534150-58534169 MsG0180003217.01.T01:CDS 40.0%
CTTTCAATTAGCTCAGTTGC+CGG - Chr1:58534976-58534995 None:intergenic 40.0%
GAACAATTTCAGCAGAGGTT+TGG - Chr1:58536862-58536881 None:intergenic 40.0%
GAACACCGTTTGGGAATTTA+AGG - Chr1:58540308-58540327 None:intergenic 40.0%
GACAAAACAGCTCCAGAATA+CGG + Chr1:58536602-58536621 MsG0180003217.01.T01:intron 40.0%
GAGATGACTCCATAAGGAAA+AGG + Chr1:58534043-58534062 MsG0180003217.01.T01:intron 40.0%
GAGGGTTCCTAAGATTTATG+TGG + Chr1:58540248-58540267 MsG0180003217.01.T01:intron 40.0%
GAGTGTTCAATTTCAGTTGG+TGG - Chr1:58534631-58534650 None:intergenic 40.0%
GATTGCTTCTTTCAAAGAGC+AGG + Chr1:58533227-58533246 MsG0180003217.01.T01:intron 40.0%
GGAAAAAGGAAAGATGCAGA+AGG + Chr1:58533862-58533881 MsG0180003217.01.T01:CDS 40.0%
GGTGAGAAAAACACAAGAAG+GGG - Chr1:58537391-58537410 None:intergenic 40.0%
GTATCCTAGCAAATGCCTAT+AGG + Chr1:58539741-58539760 MsG0180003217.01.T01:intron 40.0%
GTGAGAAAAACACAAGAAGG+GGG - Chr1:58537390-58537409 None:intergenic 40.0%
GTTCATGCATACATGACTGA+TGG + Chr1:58537774-58537793 MsG0180003217.01.T01:intron 40.0%
GTTTGTAAGCTCAGAATCTG+AGG - Chr1:58535884-58535903 None:intergenic 40.0%
TAAAGACTATCAGACTCAGG+GGG + Chr1:58535842-58535861 MsG0180003217.01.T01:intron 40.0%
TACACTTGTGGACATGAACT+TGG + Chr1:58538031-58538050 MsG0180003217.01.T01:intron 40.0%
TAGAGAGATGTCAACATCCA+TGG - Chr1:58534669-58534688 None:intergenic 40.0%
TAGATTGGAACCGGTTGTAT+TGG - Chr1:58539207-58539226 None:intergenic 40.0%
TAGTCTCATCTAGATGCATG+TGG - Chr1:58537877-58537896 None:intergenic 40.0%
TATGGAGTCATCTCAACCAT+AGG - Chr1:58534037-58534056 None:intergenic 40.0%
TCAATGCAAAAGCTGTCCAT+TGG + Chr1:58536420-58536439 MsG0180003217.01.T01:intron 40.0%
TCACTTTCCTTAAAGATGGG+AGG - Chr1:58533600-58533619 None:intergenic 40.0%
TCAGACAGCAATCTTCCATA+GGG - Chr1:58533390-58533409 None:intergenic 40.0%
TCCAAATCTTGAACAGGGTT+AGG - Chr1:58534780-58534799 None:intergenic 40.0%
TCCTAACCCTGTTCAAGATT+TGG + Chr1:58534776-58534795 MsG0180003217.01.T01:intron 40.0%
TCTGAATTACCTGATCTGCA+GGG - Chr1:58534336-58534355 None:intergenic 40.0%
TCTTGAACAGGGTTAGGAAT+TGG - Chr1:58534774-58534793 None:intergenic 40.0%
TGACTCCATAAGGAAAAGGA+TGG + Chr1:58534047-58534066 MsG0180003217.01.T01:intron 40.0%
TGAGAAAAACACAAGAAGGG+GGG - Chr1:58537389-58537408 None:intergenic 40.0%
TGGTGAAATAGCTTCTGATG+AGG - Chr1:58536350-58536369 None:intergenic 40.0%
TGTTATGTGGAGATGATTGG+TGG + Chr1:58537587-58537606 MsG0180003217.01.T01:intron 40.0%
TTCACCAACAGTCTATGCAA+CGG - Chr1:58537903-58537922 None:intergenic 40.0%
TTCAGACAGCAATCTTCCAT+AGG - Chr1:58533391-58533410 None:intergenic 40.0%
TTGAGTGAAGCAAAATCCAC+CGG - Chr1:58532779-58532798 None:intergenic 40.0%
! AAATCTCCTTGGAAGTGCAA+GGG + Chr1:58537171-58537190 MsG0180003217.01.T01:intron 40.0%
! ACTCAGCTACTGATTGAACT+AGG - Chr1:58533631-58533650 None:intergenic 40.0%
! AGATGCAAAGCCTTCTGAAA+TGG + Chr1:58533170-58533189 MsG0180003217.01.T01:intron 40.0%
! ATCTGCCATCCTTTTCCTTA+TGG - Chr1:58534055-58534074 None:intergenic 40.0%
! GCTTCAGAAGTGATCTTTTG+TGG - Chr1:58534310-58534329 None:intergenic 40.0%
! GGCAATTGAGCTTGTTTACT+TGG + Chr1:58537455-58537474 MsG0180003217.01.T01:intron 40.0%
! TGAACTTGGTCAAGGACTTT+TGG + Chr1:58532882-58532901 MsG0180003217.01.T01:CDS 40.0%
! TGCTAGCTTCTGTGATTGTT+GGG - Chr1:58533265-58533284 None:intergenic 40.0%
! TGTTTGCTTACGACTTTTGC+AGG - Chr1:58532934-58532953 None:intergenic 40.0%
! TTGCTAGCTTCTGTGATTGT+TGG - Chr1:58533266-58533285 None:intergenic 40.0%
!! AGTGAGTGAGTATTGGGTTA+AGG - Chr1:58540036-58540055 None:intergenic 40.0%
!! ATGTAATGGATCATCTCTGC+TGG + Chr1:58533327-58533346 MsG0180003217.01.T01:intron 40.0%
!! ATGTTTGAGTGTTGAGTTGG+GGG - Chr1:58534591-58534610 None:intergenic 40.0%
!! ATTTCAGTTGGTGGTTGTTG+TGG - Chr1:58534622-58534641 None:intergenic 40.0%
!! CAAAAGATCACTTCTGAAGC+TGG + Chr1:58534310-58534329 MsG0180003217.01.T01:CDS 40.0%
!! CAAGGTACTACACACTCTTT+TGG + Chr1:58533137-58533156 MsG0180003217.01.T01:intron 40.0%
!! CGATGTTTTTGTTGCATCGA+AGG + Chr1:58537828-58537847 MsG0180003217.01.T01:intron 40.0%
!! CTTCAGAAGCACTATTCTTC+AGG - Chr1:58536240-58536259 None:intergenic 40.0%
!! CTTTGAGGTTGATTCGTTTC+TGG - Chr1:58541519-58541538 None:intergenic 40.0%
!! GAAGTGTCTTCTATTGGTTC+AGG - Chr1:58534403-58534422 None:intergenic 40.0%
!! GATGTTTGAGTGTTGAGTTG+GGG - Chr1:58534592-58534611 None:intergenic 40.0%
!! GTCTGATAGTCTTTAAGGTG+AGG - Chr1:58535837-58535856 None:intergenic 40.0%
!! TACTACACACTCTTTTGGGT+GGG + Chr1:58533142-58533161 MsG0180003217.01.T01:intron 40.0%
!! TACTTTGAAGTTCCCTCTTC+TGG - Chr1:58534270-58534289 None:intergenic 40.0%
!! TGTAATGGATCATCTCTGCT+GGG + Chr1:58533328-58533347 MsG0180003217.01.T01:intron 40.0%
!! TTTTCTAGCCTTCTTCACCA+TGG - Chr1:58541077-58541096 None:intergenic 40.0%
!!! CACACCCACTAGTTTTTATG+TGG + Chr1:58539629-58539648 MsG0180003217.01.T01:intron 40.0%
!!! GTGTTTTGACTATTGGGTCT+AGG - Chr1:58539297-58539316 None:intergenic 40.0%
AAAAGAGGAACTCCACTCCT+CGG - Chr1:58538277-58538296 None:intergenic 45.0%
AAGAAGTTCTACACTGCTCC+TGG + Chr1:58535071-58535090 MsG0180003217.01.T01:intron 45.0%
AAGGAAGATGTCCTGCTACA+AGG + Chr1:58533119-58533138 MsG0180003217.01.T01:intron 45.0%
AAGGTAACTCACCTGAGTAG+TGG - Chr1:58534447-58534466 None:intergenic 45.0%
AATCTTGCTCTCCACTACTC+AGG + Chr1:58534433-58534452 MsG0180003217.01.T01:CDS 45.0%
ACATATGTGTGCAGTACGGA+AGG - Chr1:58537412-58537431 None:intergenic 45.0%
ACCAGAAGCTGAATCTCAAC+TGG + Chr1:58536366-58536385 MsG0180003217.01.T01:intron 45.0%
ACCATAGGACTCACAAGTGA+AGG - Chr1:58534022-58534041 None:intergenic 45.0%
ACGTCCTCAGTGATGGTTAT+AGG - Chr1:58533045-58533064 None:intergenic 45.0%
AGATGAAAAGCTCAAGGCCT+TGG + Chr1:58534132-58534151 MsG0180003217.01.T01:CDS 45.0%
AGCAGCAAGAAGCTAGAGAA+AGG + Chr1:58535178-58535197 MsG0180003217.01.T01:intron 45.0%
AGCCTTCTTCTTCTTCAGCT+TGG - Chr1:58533997-58534016 None:intergenic 45.0%
AGCTATAACGTCCTCAGTGA+TGG - Chr1:58533052-58533071 None:intergenic 45.0%
AGTGTGTAGTACCTTGTAGC+AGG - Chr1:58533133-58533152 None:intergenic 45.0%
ATGGTGAAGAGGGTGAAATG+GGG - Chr1:58534375-58534394 None:intergenic 45.0%
ATGTGGTACCAAACACCTCA+AGG - Chr1:58537860-58537879 None:intergenic 45.0%
CAAAGTAGCCATGGTGAAGA+AGG + Chr1:58541066-58541085 MsG0180003217.01.T01:CDS 45.0%
CAAGCTTCACAACGACTCTT+TGG + Chr1:58536724-58536743 MsG0180003217.01.T01:intron 45.0%
CAAGTGCATATGAAGACTCC+TGG + Chr1:58534937-58534956 MsG0180003217.01.T01:intron 45.0%
CATAGGACTCACAAGTGAAG+GGG - Chr1:58534020-58534039 None:intergenic 45.0%
CATGCATACATGACTGATGG+TGG + Chr1:58537777-58537796 MsG0180003217.01.T01:intron 45.0%
CCAGATTCCAGGATGTTTGT+GGG - Chr1:58534840-58534859 None:intergenic 45.0%
CCATAGGACTCACAAGTGAA+GGG - Chr1:58534021-58534040 None:intergenic 45.0%
CCGGTTCCAATCTAACCATA+TGG + Chr1:58539213-58539232 MsG0180003217.01.T01:intron 45.0%
CGCCTGCATATATGTTCCTT+TGG + Chr1:58536628-58536647 MsG0180003217.01.T01:intron 45.0%
CTGAAAGGACTATCAGTAGC+AGG + Chr1:58533487-58533506 MsG0180003217.01.T01:intron 45.0%
CTTACACAACCTTGCTTCTC+TGG - Chr1:58535133-58535152 None:intergenic 45.0%
GAAGCCCCGATACATCAAAA+TGG - Chr1:58538598-58538617 None:intergenic 45.0%
GAGAAGCTGCTCTTGCTAAA+GGG + Chr1:58533678-58533697 MsG0180003217.01.T01:intron 45.0%
GAGTGATAAGGGTTCAGATG+AGG + Chr1:58540592-58540611 MsG0180003217.01.T01:CDS 45.0%
GATGGTGAAGAGGGTGAAAT+GGG - Chr1:58534376-58534395 None:intergenic 45.0%
GCAGCAAGAAGCTAGAGAAA+GGG + Chr1:58535179-58535198 MsG0180003217.01.T01:intron 45.0%
GCCTTCTTCTTCTTCAGCTT+GGG - Chr1:58533996-58534015 None:intergenic 45.0%
GGACTTTCCTCCCATCTTTA+AGG + Chr1:58533590-58533609 MsG0180003217.01.T01:intron 45.0%
GGAGGAAGCTCTTGAAGAAA+TGG + Chr1:58533953-58533972 MsG0180003217.01.T01:intron 45.0%
GTCTTCCTCATTGTCTTCAG+AGG - Chr1:58534221-58534240 None:intergenic 45.0%
GTGGACACAAAACAGAGTAG+TGG - Chr1:58536575-58536594 None:intergenic 45.0%
GTGTGTTTGAAGATGAAGGC+TGG - Chr1:58534734-58534753 None:intergenic 45.0%
GTGTTGGGGTTATGTGTTGA+GGG - Chr1:58534540-58534559 None:intergenic 45.0%
TCAGTAGCTGAGTACCTTTG+AGG + Chr1:58533638-58533657 MsG0180003217.01.T01:intron 45.0%
TCCAGATTCCAGGATGTTTG+TGG - Chr1:58534841-58534860 None:intergenic 45.0%
TCCAGTTGAGATTCAGCTTC+TGG - Chr1:58536370-58536389 None:intergenic 45.0%
TCCCAAGCTGAAGAAGAAGA+AGG + Chr1:58533992-58534011 MsG0180003217.01.T01:intron 45.0%
TCGAAGTCTCTACTGCTGAA+AGG + Chr1:58533472-58533491 MsG0180003217.01.T01:intron 45.0%
TCTGATGCACCAAAGGGAAA+AGG + Chr1:58533746-58533765 MsG0180003217.01.T01:intron 45.0%
TCTTCAGGAGAGCTTACTTC+AGG - Chr1:58536225-58536244 None:intergenic 45.0%
TGCTAAAGGGAAAGGCAAGA+AGG + Chr1:58533691-58533710 MsG0180003217.01.T01:intron 45.0%
TGCTTCTTTCAAAGAGCAGG+AGG + Chr1:58533230-58533249 MsG0180003217.01.T01:intron 45.0%
TGGAGATTCACAACGGATGT+TGG + Chr1:58533190-58533209 MsG0180003217.01.T01:intron 45.0%
TGGGCCAACATATGTGAACT+TGG + Chr1:58532868-58532887 MsG0180003217.01.T01:CDS 45.0%
TGGTTTCAGAAGCAAGGACT+AGG - Chr1:58535350-58535369 None:intergenic 45.0%
TGTCAACATCCATGGAGAGT+TGG - Chr1:58534661-58534680 None:intergenic 45.0%
TGTTGGGGTTATGTGTTGAG+GGG - Chr1:58534539-58534558 None:intergenic 45.0%
TGTTTGTGGGTGGTTGTTCA+AGG - Chr1:58534827-58534846 None:intergenic 45.0%
TTCTGACACAGCAACTGCTT+TGG - Chr1:58533717-58533736 None:intergenic 45.0%
TTTGACTATTGGGTCTAGGG+AGG - Chr1:58539293-58539312 None:intergenic 45.0%
! AAACAGAGTAGTGGAGAACG+TGG - Chr1:58536566-58536585 None:intergenic 45.0%
! AACACAAGGGTGTGCAACTA+AGG - Chr1:58535298-58535317 None:intergenic 45.0%
! AATCTCCTTGGAAGTGCAAG+GGG + Chr1:58537172-58537191 MsG0180003217.01.T01:intron 45.0%
! ACACAAGGGTGTGCAACTAA+GGG - Chr1:58535297-58535316 None:intergenic 45.0%
! ATCCATGGAGAGTTGGTTGT+GGG - Chr1:58534654-58534673 None:intergenic 45.0%
! CCGTTTCTAAGAAGAAAGGC+TGG - Chr1:58535101-58535120 None:intergenic 45.0%
! CTAGATTAGGGCTCTGATCT+AGG + Chr1:58538309-58538328 MsG0180003217.01.T01:intron 45.0%
! CTTTTGTGGATCAGCAGTTG+AGG - Chr1:58534296-58534315 None:intergenic 45.0%
! GAAATCTCCTTGGAAGTGCA+AGG + Chr1:58537170-58537189 MsG0180003217.01.T01:intron 45.0%
! GAAGGCTTGTGCTTGCATTT+TGG + Chr1:58536501-58536520 MsG0180003217.01.T01:intron 45.0%
! GTAAGCCTCTGAAGACAATG+AGG + Chr1:58534213-58534232 MsG0180003217.01.T01:intron 45.0%
! GTACTACACACTCTTTTGGG+TGG + Chr1:58533141-58533160 MsG0180003217.01.T01:intron 45.0%
! TCTTTATCAAGGAAGGGTGC+TGG + Chr1:58533411-58533430 MsG0180003217.01.T01:intron 45.0%
! TGATGGTGAAGAGGGTGAAA+TGG - Chr1:58534377-58534396 None:intergenic 45.0%
! TTTTCAGAAGCAGCTGCTTC+TGG - Chr1:58534508-58534527 None:intergenic 45.0%
!! AAGTTGACTTTGGGGTTCTG+AGG - Chr1:58535906-58535925 None:intergenic 45.0%
!! AGCTGTTTTGTCTTGTAGCG+TGG - Chr1:58536594-58536613 None:intergenic 45.0%
!! ATGGTAGCTGTTGGTGATTG+TGG - Chr1:58534565-58534584 None:intergenic 45.0%
!! GCTGTTTCTGATGCACCAAA+GGG + Chr1:58533740-58533759 MsG0180003217.01.T01:intron 45.0%
!! GGGGAGTGTTCAATTTCAGT+TGG - Chr1:58534634-58534653 None:intergenic 45.0%
!! GGTTGGTAAAGAAAGGACTC+TGG + Chr1:58541331-58541350 MsG0180003217.01.T01:CDS 45.0%
!! TACTGGTTCCTTCCACAATC+CGG - Chr1:58537211-58537230 None:intergenic 45.0%
!! TCTATTGGTTCAGGTGCTGA+TGG - Chr1:58534394-58534413 None:intergenic 45.0%
!! TGCTGTTTCTGATGCACCAA+AGG + Chr1:58533739-58533758 MsG0180003217.01.T01:intron 45.0%
!! TGGTAGCTGTTGGTGATTGT+GGG - Chr1:58534564-58534583 None:intergenic 45.0%
!! TTCAGGAGCGCTATTTCTTC+AGG - Chr1:58536208-58536227 None:intergenic 45.0%
!!! TAGTTCTGGCCTTTTCCCTT+TGG - Chr1:58533758-58533777 None:intergenic 45.0%
!! TATATATATATATATATGAT+AGG - Chr1:58539893-58539912 None:intergenic 5.0%
!!! AAAAAAAATCTAATTTTTAT+AGG - Chr1:58540925-58540944 None:intergenic 5.0%
!!! ATTTTAATTATCTTTTTTTA+AGG - Chr1:58539524-58539543 None:intergenic 5.0%
!!! TAAAAATTAGATTTTTTTTA+AGG + Chr1:58540926-58540945 MsG0180003217.01.T01:intron 5.0%
!!! TTTTAATTATCTTTTTTTAA+GGG - Chr1:58539523-58539542 None:intergenic 5.0%
ACAACCACCCACAAACATCC+TGG + Chr1:58534830-58534849 MsG0180003217.01.T01:intron 50.0%
ACTCCATCTACCCGTCCATA+CGG - Chr1:58538225-58538244 None:intergenic 50.0%
ACTGGACTACTTCCGGATTG+TGG + Chr1:58537196-58537215 MsG0180003217.01.T01:intron 50.0%
AGACCTCGCATCTTCCTCAA+AGG - Chr1:58533655-58533674 None:intergenic 50.0%
AGAGCCGTTGCATAGACTGT+TGG + Chr1:58537896-58537915 MsG0180003217.01.T01:intron 50.0%
AGCTCCCCTAAGTTCTATCC+AGG - Chr1:58535808-58535827 None:intergenic 50.0%
AGCTTGTAGGATGGATGCAG+AGG + Chr1:58533074-58533093 MsG0180003217.01.T01:intron 50.0%
AGGCTAAGTGCATCAGAGCA+AGG + Chr1:58535000-58535019 MsG0180003217.01.T01:intron 50.0%
AGTTCAAGTAGAGTCACCGG+TGG + Chr1:58532760-58532779 MsG0180003217.01.T01:CDS 50.0%
ATCTACCCGTCCATACGGAA+AGG - Chr1:58538220-58538239 None:intergenic 50.0%
CCCACAAACATCCTGGAATC+TGG + Chr1:58534837-58534856 MsG0180003217.01.T01:intron 50.0%
CCCTTCACTTGTGAGTCCTA+TGG + Chr1:58534018-58534037 MsG0180003217.01.T01:intron 50.0%
CTTCAAGCTGTTGTTGCCTC+TGG - Chr1:58535219-58535238 None:intergenic 50.0%
CTTCAGAGGCTTACCAGCAA+TGG - Chr1:58534207-58534226 None:intergenic 50.0%
CTTGCTTGTGTGCTTGAGCA+TGG + Chr1:58537096-58537115 MsG0180003217.01.T01:intron 50.0%
GAAAAGCTCAAGGCCTTGGA+TGG + Chr1:58534136-58534155 MsG0180003217.01.T01:CDS 50.0%
GAAAGGTGGGTGGTAAACCA+CGG - Chr1:58538203-58538222 None:intergenic 50.0%
GACTACTTCCGGATTGTGGA+AGG + Chr1:58537200-58537219 MsG0180003217.01.T01:intron 50.0%
GATGTAATGCTAACCCTCCG+TGG + Chr1:58538183-58538202 MsG0180003217.01.T01:intron 50.0%
GATTCCAGGATGTTTGTGGG+TGG - Chr1:58534837-58534856 None:intergenic 50.0%
GCAATGTGTGGTAGAGGTTG+AGG - Chr1:58534705-58534724 None:intergenic 50.0%
GCTGAAGTAAGAGCCATTGC+TGG + Chr1:58534191-58534210 MsG0180003217.01.T01:intron 50.0%
GCTGCTCTTGCTAAAGGGAA+AGG + Chr1:58533683-58533702 MsG0180003217.01.T01:intron 50.0%
GCTTGTAGGATGGATGCAGA+GGG + Chr1:58533075-58533094 MsG0180003217.01.T01:intron 50.0%
GGAGAAGCTGCTCTTGCTAA+AGG + Chr1:58533677-58533696 MsG0180003217.01.T01:intron 50.0%
GGGACTGCAACAATAAGGGT+TGG + Chr1:58541314-58541333 MsG0180003217.01.T01:CDS 50.0%
TCAGAGGCAATGTGTGGTAG+AGG - Chr1:58534711-58534730 None:intergenic 50.0%
TCCTGGCATCACTTCAGAAC+CGG + Chr1:58534954-58534973 MsG0180003217.01.T01:intron 50.0%
TCTTGCAGTTGTGCTTGAGC+AGG + Chr1:58537037-58537056 MsG0180003217.01.T01:intron 50.0%
TGATGTATCGGGGCTTCACA+GGG + Chr1:58538601-58538620 MsG0180003217.01.T01:intron 50.0%
TTACCACCCACCTTTCCGTA+TGG + Chr1:58538207-58538226 MsG0180003217.01.T01:intron 50.0%
TTCAGGAGCAGCTTGACTTC+AGG - Chr1:58536191-58536210 None:intergenic 50.0%
TTGATGTATCGGGGCTTCAC+AGG + Chr1:58538600-58538619 MsG0180003217.01.T01:intron 50.0%
TTTCCGTATGGACGGGTAGA+TGG + Chr1:58538219-58538238 MsG0180003217.01.T01:intron 50.0%
! ACAACGACTCTTTGGTGTGC+TGG + Chr1:58536732-58536751 MsG0180003217.01.T01:intron 50.0%
! ATCTCCTTGGAAGTGCAAGG+GGG + Chr1:58537173-58537192 MsG0180003217.01.T01:intron 50.0%
! CATCCATGGAGAGTTGGTTG+TGG - Chr1:58534655-58534674 None:intergenic 50.0%
! CGCGCGTTTTACCGCTTATT+AGG + Chr1:58538547-58538566 MsG0180003217.01.T01:intron 50.0%
! GCTTCTGATGATGTGGCTTC+TGG - Chr1:58536271-58536290 None:intergenic 50.0%
! GGACTCTGGAAGTGAGTTTG+AGG + Chr1:58541345-58541364 MsG0180003217.01.T01:CDS 50.0%
! GGTGCTGAAGCCACAAAAAG+AGG + Chr1:58540518-58540537 MsG0180003217.01.T01:CDS 50.0%
! GGTGTTGGGGTTATGTGTTG+AGG - Chr1:58534541-58534560 None:intergenic 50.0%
! GTACCTTTGAGGAAGATGCG+AGG + Chr1:58533649-58533668 MsG0180003217.01.T01:intron 50.0%
! GTTGTTGCTTGTTGATGCCG+AGG + Chr1:58538257-58538276 MsG0180003217.01.T01:intron 50.0%
! TCCATGGAGAGTTGGTTGTG+GGG - Chr1:58534653-58534672 None:intergenic 50.0%
! TGAAGATGAAGGCTGGTCAG+AGG - Chr1:58534727-58534746 None:intergenic 50.0%
! TGACGCAGCTTCTGATGATG+TGG - Chr1:58536278-58536297 None:intergenic 50.0%
! TGCTTCAGAGGCCTTTTCTG+AGG - Chr1:58534482-58534501 None:intergenic 50.0%
!! AAGGCTCTGAGCCCCATTAA+TGG + Chr1:58535589-58535608 MsG0180003217.01.T01:intron 50.0%
!! AGAAGAAAGGCTGGTTTGCC+AGG - Chr1:58535092-58535111 None:intergenic 50.0%
!! AGTGTTGAGTTGGGGGTCAA+TGG - Chr1:58534584-58534603 None:intergenic 50.0%
!! GCATACATGACTGATGGTGG+TGG + Chr1:58537780-58537799 MsG0180003217.01.T01:intron 50.0%
!! GGTAGCTGTTGGTGATTGTG+GGG - Chr1:58534563-58534582 None:intergenic 50.0%
!! GTAGCTGTTGGTGATTGTGG+GGG - Chr1:58534562-58534581 None:intergenic 50.0%
!! TCAGGTGCTGATGGTGAAGA+GGG - Chr1:58534385-58534404 None:intergenic 50.0%
!! TGCTTCTGGAGTTGCTTCAG+AGG - Chr1:58534494-58534513 None:intergenic 50.0%
!! TTCAGGTGCTGATGGTGAAG+AGG - Chr1:58534386-58534405 None:intergenic 50.0%
!! TTGGTGATTGTGGGGGTGTT+GGG - Chr1:58534555-58534574 None:intergenic 50.0%
AAGGGGGACTGGACTACTTC+CGG + Chr1:58537189-58537208 MsG0180003217.01.T01:intron 55.0%
ACCCACCTTTCCGTATGGAC+GGG + Chr1:58538212-58538231 MsG0180003217.01.T01:intron 55.0%
ACCCGTCCATACGGAAAGGT+GGG - Chr1:58538216-58538235 None:intergenic 55.0%
ACTATTGGGTCTAGGGAGGC+AGG - Chr1:58539289-58539308 None:intergenic 55.0%
AGAGGGTGAAATGGGGAGAG+AGG - Chr1:58534368-58534387 None:intergenic 55.0%
ATGCAGGCGAGACCGTATTC+TGG - Chr1:58536617-58536636 None:intergenic 55.0%
ATGTATCGGGGCTTCACAGG+GGG + Chr1:58538603-58538622 MsG0180003217.01.T01:intron 55.0%
CACCCACCTTTCCGTATGGA+CGG + Chr1:58538211-58538230 MsG0180003217.01.T01:intron 55.0%
CATCGAAGGTGACGACCTTG+AGG + Chr1:58537842-58537861 MsG0180003217.01.T01:intron 55.0%
GAAATGGGGAGAGAGGTGAC+TGG - Chr1:58534361-58534380 None:intergenic 55.0%
GATGTATCGGGGCTTCACAG+GGG + Chr1:58538602-58538621 MsG0180003217.01.T01:intron 55.0%
GGAACAGCTCTCTTCTCCAG+AGG + Chr1:58535200-58535219 MsG0180003217.01.T01:intron 55.0%
TACCCGTCCATACGGAAAGG+TGG - Chr1:58538217-58538236 None:intergenic 55.0%
TCCCCACAACCAACTCTCCA+TGG + Chr1:58534649-58534668 MsG0180003217.01.T01:intron 55.0%
TGAGGAAGATGCGAGGTCTC+AGG + Chr1:58533656-58533675 MsG0180003217.01.T01:intron 55.0%
TGGGGGTCAATGGTAGCTGT+TGG - Chr1:58534574-58534593 None:intergenic 55.0%
! CAAGGGTGTGCAACTAAGGG+TGG - Chr1:58535294-58535313 None:intergenic 55.0%
! GGTGACGACCTTGAGGTGTT+TGG + Chr1:58537849-58537868 MsG0180003217.01.T01:intron 55.0%
! TGCTTGTTGATGCCGAGGAG+TGG + Chr1:58538262-58538281 MsG0180003217.01.T01:intron 55.0%
! TGGTAATCACCCAAGAGCGC+TGG + Chr1:58533932-58533951 MsG0180003217.01.T01:intron 55.0%
!! GTTGGTGATTGTGGGGGTGT+TGG - Chr1:58534556-58534575 None:intergenic 55.0%
!! TAATCACCCAAGAGCGCTGG+AGG + Chr1:58533935-58533954 MsG0180003217.01.T01:intron 55.0%
!! TGGTGATTGTGGGGGTGTTG+GGG - Chr1:58534554-58534573 None:intergenic 55.0%
AGAGCTTCCTCCAGCGCTCT+TGG - Chr1:58533945-58533964 None:intergenic 60.0%
AGGTGGGTGGTAAACCACGG+AGG - Chr1:58538200-58538219 None:intergenic 60.0%
CAGTCCCCCTTGCACTTCCA+AGG - Chr1:58537180-58537199 None:intergenic 60.0%
CGTCCATACGGAAAGGTGGG+TGG - Chr1:58538213-58538232 None:intergenic 60.0%
GAGCTTCCTCCAGCGCTCTT+GGG - Chr1:58533944-58533963 None:intergenic 60.0%
GGTGGGTGGTAAACCACGGA+GGG - Chr1:58538199-58538218 None:intergenic 60.0%
TGAAGCTGGCCCTGCAGATC+AGG + Chr1:58534324-58534343 MsG0180003217.01.T01:CDS 60.0%
TGGACGGGTAGATGGAGTGC+AGG + Chr1:58538227-58538246 MsG0180003217.01.T01:intron 60.0%
! CTTGGAAGTGCAAGGGGGAC+TGG + Chr1:58537178-58537197 MsG0180003217.01.T01:intron 60.0%
! GGCTGGTCAGAGGCAATGTG+TGG - Chr1:58534717-58534736 None:intergenic 60.0%
!! GCCGGTTCTGAAGTGATGCC+AGG - Chr1:58534958-58534977 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
Chr1 gene 58532734 58541598 58532734 ID=MsG0180003217.01;Name=MsG0180003217.01
Chr1 mRNA 58532734 58541598 58532734 ID=MsG0180003217.01.T01;Parent=MsG0180003217.01;Name=MsG0180003217.01.T01;_AED=0.56;_eAED=0.69;_QI=0|0|0|0.75|0.85|1|8|0|488
Chr1 exon 58532734 58532942 58532734 ID=MsG0180003217.01.T01:exon:22952;Parent=MsG0180003217.01.T01
Chr1 exon 58533820 58533919 58533820 ID=MsG0180003217.01.T01:exon:22953;Parent=MsG0180003217.01.T01
Chr1 exon 58534098 58534196 58534098 ID=MsG0180003217.01.T01:exon:22954;Parent=MsG0180003217.01.T01
Chr1 exon 58534271 58534528 58534271 ID=MsG0180003217.01.T01:exon:22955;Parent=MsG0180003217.01.T01
Chr1 exon 58540249 58540321 58540249 ID=MsG0180003217.01.T01:exon:22956;Parent=MsG0180003217.01.T01
Chr1 exon 58540438 58540701 58540438 ID=MsG0180003217.01.T01:exon:22957;Parent=MsG0180003217.01.T01
Chr1 exon 58541059 58541192 58541059 ID=MsG0180003217.01.T01:exon:22958;Parent=MsG0180003217.01.T01
Chr1 exon 58541269 58541598 58541269 ID=MsG0180003217.01.T01:exon:22959;Parent=MsG0180003217.01.T01
Chr1 CDS 58532734 58532942 58532734 ID=MsG0180003217.01.T01:cds;Parent=MsG0180003217.01.T01
Chr1 CDS 58533820 58533919 58533820 ID=MsG0180003217.01.T01:cds;Parent=MsG0180003217.01.T01
Chr1 CDS 58534098 58534196 58534098 ID=MsG0180003217.01.T01:cds;Parent=MsG0180003217.01.T01
Chr1 CDS 58534271 58534528 58534271 ID=MsG0180003217.01.T01:cds;Parent=MsG0180003217.01.T01
Chr1 CDS 58540249 58540321 58540249 ID=MsG0180003217.01.T01:cds;Parent=MsG0180003217.01.T01
Chr1 CDS 58540438 58540701 58540438 ID=MsG0180003217.01.T01:cds;Parent=MsG0180003217.01.T01
Chr1 CDS 58541059 58541192 58541059 ID=MsG0180003217.01.T01:cds;Parent=MsG0180003217.01.T01
Chr1 CDS 58541269 58541598 58541269 ID=MsG0180003217.01.T01:cds;Parent=MsG0180003217.01.T01
Gene Sequence

>MsG0180003217.01.T01

ATGGATATTCCATGGGAATCCTTAATAGTTCAAGTAGAGTCACCGGTGGATTTTGCTTCACTCAAGAAGTATGAAGTAAACATGGAAGGATTGATAGAGACTCAGATGCTGTCTGAGTATTTCAAGATGCTAAATGGGCCAACATATGTGAACTTGGTCAAGGACTTTTGGTTAAAAGCTGAAGTGTACAATGAAAGCCTGCAAAAGTCAACTAGTACTGAGTCAGAAGCTGCTAAACCTGTTTCTATCAAGGAAAAAGGAAAGATGCAGAAGGTTGGTGCTGCCTCTATTCCTCAAAAAGAAGAAAAGACAGAAAGGAACAAAGCACAATACATTCATCAAGAGATGAAAAGCTCAAGGCCTTGGATGGAAGATTGTGATAGGTTCTACAAAGATAAATTGGCTGAAAAGAGGGAACTTCAAAGTAGTTCCTCAACTGCTGATCCACAAAAGATCACTTCTGAAGCTGGCCCTGCAGATCAGGTAATTCAGATTCCAGTCACCTCTCTCCCCATTTCACCCTCTTCACCATCAGCACCTGAACCAATAGAAGACACTTCTGTCTTAGACAATCTTGCTCTCCACTACTCAGGTGAGTTACCTTTAGACAAATCTACCTCAGAAAAGGCCTCTGAAGCAACTCCAGAAGCAGCTGCTTCTGAAAATAGGGTTCCTAAGATTTATGTGGAGAAATATTGGAAAGGAATATCAAACCCTATATTCCTTAAATTCCCAAACGGTGGATCATATTTTAAGGTTAAGATATTTGGTGCCAATACTTTAGAAATAAATTATTCCAATATCAAATCTGTTGATGATGGTGCTGAAGCCACAAAAAGAGGTCAAGAAAGTGATGATCAAGCCACAAAAGAAGTTCATGAAAGTGATGAAGTGAGTGATAAGGGTTCAGATGAGGTTGAAATTCTAAAGCAAGTTCAAAGAACTAGAAATGGCAAAAGAAAAGTGAGTATGGATTTTGCCACTACCCAACAAAAATTCTCAGGTAGTAACAAAGTAGCCATGGTGAAGAAGGCTAGAAAATACCCAACATCTGAAGCTTTAATCGAGAGAGCTAATAATGAAAATCCTTATTTTGAAATTATAATGTCACATACTTACGCCAATGGTTATTACTTGTGGATACCAAGTATATTTTCAAGAGAACACTTGAACAATTTTAAAGGGACTGCAACAATAAGGGTTGGTAAAGAAAGGACTCTGGAAGTGAGTTTGAGGTATTATGATAGCAAGAAAAAATCTTGTATGAGTGGTGGTTGGAAATTATTCAACAGAAAATATAATTTGCAAGTTGATGATGTTTGCAAATTTGAGATGATTCAAAGGAAACCAATTTCATTCAATGTTACTATTACTCGTGCTCGTGCCAGAAACGAATCAACCTCAAAGAAATTCCTAGGTTTTTCTTTCTTTCTTTTTAGTTTTTTATTTGGATTTTTCTATGTTTAA
Protein sequence

>MsG0180003217.01.T01

MDIPWESLIVQVESPVDFASLKKYEVNMEGLIETQMLSEYFKMLNGPTYVNLVKDFWLKAEVYNESLQKSTSTESEAAKPVSIKEKGKMQKVGAASIPQKEEKTERNKAQYIHQEMKSSRPWMEDCDRFYKDKLAEKRELQSSSSTADPQKITSEAGPADQVIQIPVTSLPISPSSPSAPEPIEDTSVLDNLALHYSGELPLDKSTSEKASEATPEAAASENRVPKIYVEKYWKGISNPIFLKFPNGGSYFKVKIFGANTLEINYSNIKSVDDGAEATKRGQESDDQATKEVHESDEVSDKGSDEVEILKQVQRTRNGKRKVSMDFATTQQKFSGSNKVAMVKKARKYPTSEALIERANNENPYFEIIMSHTYANGYYLWIPSIFSREHLNNFKGTATIRVGKERTLEVSLRYYDSKKKSCMSGGWKLFNRKYNLQVDDVCKFEMIQRKPISFNVTITRARARNESTSKKFLGFSFFLFSFLFGFFYV*