AlfalfaGEDB | MsG0180003477.01

M. sativa cultivar ZhongmuNo.1 / MsG0180003477.01

KEGG: -
GO: -
PFAM: PF03101

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180003477.01.T01	XP_024629942.1	73.333	195	48	1	1	195	1	191	6.82E-95	289
MsG0180003477.01.T02	XP_024629942.1	72.527	182	46	1	1	182	14	191	7.22E-86	266

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180003477.01.T01	Q9SZL8	35.955	178	110	3	6	179	69	246	5.17E-27	111
MsG0180003477.01.T02	Q9SZL8	35.882	170	105	3	1	166	77	246	3.59E-25	105

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180003477.01.T01	A0A396H640	69.898	196	54	2	1	195	1	192	3.60e-92	281
MsG0180003477.01.T01	A0A396JHA3	70.256	195	54	1	1	195	1	191	2.80e-89	283
MsG0180003477.01.T02	A0A396H640	69.945	183	50	2	1	182	14	192	1.55e-83	259

TFs/TRs:

Gene ID	Type	Classification
MsG0180003477.01.T02	TF	FAR1

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180003477.01.T01	MTR_7g074790	66.854	178	41	1	1	178	1	160	7.05e-79	236
MsG0180003477.01.T01	MTR_5g039760	55.102	196	59	3	1	195	1	168	1.90e-65	200
MsG0180003477.01.T01	MTR_7g061980	65.546	119	41	0	1	119	1	119	1.57e-50	160
MsG0180003477.01.T01	MTR_0402s0040	44.509	173	91	4	10	179	26	196	1.42e-36	134
MsG0180003477.01.T01	MTR_4g102720	36.095	169	74	2	7	175	4	138	2.38e-29	109
MsG0180003477.01.T01	MTR_5g015480	36.493	211	118	8	4	205	53	256	9.18e-24	95.5
MsG0180003477.01.T01	MTR_4g069880	66.176	68	23	0	1	68	1	68	1.56e-22	87.0
MsG0180003477.01.T01	MTR_2g099430	56.818	88	36	2	33	119	26	112	8.64e-22	86.7
MsG0180003477.01.T01	MTR_6g051425	30.726	179	112	5	9	177	13	189	6.54e-21	89.4
MsG0180003477.01.T01	MTR_2g070590	45.283	106	54	3	10	112	17	121	1.72e-19	80.9
MsG0180003477.01.T01	MTR_7g113010	40.157	127	60	3	10	134	457	569	4.08e-18	82.4
MsG0180003477.01.T01	MTR_6g017200	46.512	86	44	2	10	94	58	142	7.73e-18	77.4
MsG0180003477.01.T01	MTR_1g070355	30.488	164	111	2	15	175	79	242	3.48e-17	79.7
MsG0180003477.01.T01	MTR_1g057920	45.349	86	45	2	10	94	34	118	1.37e-16	73.2
MsG0180003477.01.T01	MTR_5g076070	28.750	160	111	2	13	169	56	215	2.14e-16	76.3
MsG0180003477.01.T01	MTR_4g067290	41.509	106	54	4	9	110	55	156	2.04e-15	72.8
MsG0180003477.01.T01	MTR_4g067290	41.509	106	54	4	9	110	55	156	2.10e-15	72.8
MsG0180003477.01.T01	MTR_4g067290	41.509	106	54	4	9	110	75	176	3.47e-15	72.4
MsG0180003477.01.T01	MTR_4g067290	41.509	106	54	4	9	110	75	176	3.52e-15	72.4
MsG0180003477.01.T01	MTR_4g067290	41.509	106	54	4	9	110	73	174	3.54e-15	72.4
MsG0180003477.01.T01	MTR_1g019850	35.200	125	72	3	3	125	63	180	3.71e-15	72.0
MsG0180003477.01.T01	MTR_2g098920	41.509	106	54	4	9	110	79	180	3.85e-15	72.4
MsG0180003477.01.T01	MTR_4g067290	41.509	106	54	4	9	110	115	216	5.33e-15	72.4
MsG0180003477.01.T01	MTR_0558s0020	28.351	194	116	5	8	181	37	227	7.11e-15	72.0
MsG0180003477.01.T01	MTR_2g014100	27.136	199	122	5	3	181	40	235	3.76e-14	69.7
MsG0180003477.01.T01	MTR_1g083640	26.633	199	123	5	3	181	47	242	1.83e-13	68.2
MsG0180003477.01.T01	MTR_7g446520	31.126	151	89	2	14	164	92	227	2.20e-13	68.2
MsG0180003477.01.T01	MTR_6g022080	26.752	157	112	2	16	169	91	247	3.30e-13	67.0
MsG0180003477.01.T01	MTR_0137s0040	50.820	61	29	1	2	61	28	88	3.86e-13	63.9
MsG0180003477.01.T01	MTR_1g013060	30.000	170	113	2	7	170	21	190	5.33e-13	66.2
MsG0180003477.01.T01	MTR_4g035820	26.857	175	119	4	10	176	75	248	9.51e-12	63.9
MsG0180003477.01.T01	MTR_7g028855	35.484	124	77	2	14	134	124	247	4.94e-11	61.6
MsG0180003477.01.T01	MTR_4g076000	59.524	42	17	0	78	119	2	43	7.43e-11	57.8
MsG0180003477.01.T02	MTR_7g074790	65.455	165	39	1	1	165	14	160	1.46e-69	212
MsG0180003477.01.T02	MTR_5g039760	54.645	183	54	3	1	182	14	168	1.69e-58	182
MsG0180003477.01.T02	MTR_7g061980	66.038	106	36	0	1	106	14	119	5.91e-44	143
MsG0180003477.01.T02	MTR_0402s0040	44.379	169	89	4	1	166	30	196	2.79e-35	129
MsG0180003477.01.T02	MTR_4g102720	34.568	162	72	2	1	162	11	138	3.15e-24	95.5
MsG0180003477.01.T02	MTR_5g015480	35.821	201	116	7	1	192	60	256	3.17e-22	91.3
MsG0180003477.01.T02	MTR_2g099430	56.818	88	36	2	20	106	26	112	6.28e-22	86.7
MsG0180003477.01.T02	MTR_6g051425	29.940	167	108	4	5	164	25	189	8.82e-20	85.9
MsG0180003477.01.T02	MTR_2g070590	45.098	102	52	3	1	99	21	121	3.75e-18	77.0
MsG0180003477.01.T02	MTR_1g070355	30.488	164	111	2	2	162	79	242	3.34e-17	79.3
MsG0180003477.01.T02	MTR_4g069880	65.455	55	19	0	1	55	14	68	1.03e-16	71.6
MsG0180003477.01.T02	MTR_6g017200	46.341	82	42	2	1	81	62	142	1.19e-16	73.9
MsG0180003477.01.T02	MTR_5g076070	28.662	157	109	2	3	156	59	215	6.21e-16	74.7
MsG0180003477.01.T02	MTR_7g113010	39.024	123	59	3	1	121	461	569	9.27e-16	75.5
MsG0180003477.01.T02	MTR_0558s0020	28.495	186	113	4	3	168	42	227	1.20e-14	71.2
MsG0180003477.01.T02	MTR_1g019850	35.965	114	64	3	1	112	74	180	3.67e-14	68.9
MsG0180003477.01.T02	MTR_2g014100	27.419	186	115	4	3	168	50	235	4.74e-14	68.9
MsG0180003477.01.T02	MTR_1g057920	43.902	82	44	2	1	81	38	118	6.08e-14	65.9
MsG0180003477.01.T02	MTR_4g067290	42.000	100	50	4	2	97	61	156	1.40e-13	67.4
MsG0180003477.01.T02	MTR_4g067290	42.000	100	50	4	2	97	61	156	1.46e-13	67.4
MsG0180003477.01.T02	MTR_4g067290	42.000	100	50	4	2	97	79	174	2.19e-13	67.0
MsG0180003477.01.T02	MTR_4g067290	42.000	100	50	4	2	97	81	176	2.24e-13	67.0
MsG0180003477.01.T02	MTR_4g067290	42.000	100	50	4	2	97	81	176	2.26e-13	67.0
MsG0180003477.01.T02	MTR_6g022080	26.752	157	112	2	3	156	91	247	2.41e-13	67.0
MsG0180003477.01.T02	MTR_4g067290	42.000	100	50	4	2	97	121	216	2.50e-13	67.4
MsG0180003477.01.T02	MTR_7g446520	31.126	151	89	2	1	151	92	227	2.62e-13	67.8
MsG0180003477.01.T02	MTR_1g083640	26.882	186	116	4	3	168	57	242	2.97e-13	67.0
MsG0180003477.01.T02	MTR_2g098920	42.000	100	50	4	2	97	85	180	3.25e-13	66.6
MsG0180003477.01.T02	MTR_4g076000	59.524	42	17	0	65	106	2	43	4.90e-11	57.8
MsG0180003477.01.T02	MTR_7g028855	35.484	124	77	2	1	121	124	247	5.60e-11	61.2
MsG0180003477.01.T02	MTR_2g098880	36.111	108	52	4	1	98	77	177	8.02e-11	60.1
MsG0180003477.01.T02	MTR_2g098880	36.111	108	52	4	1	98	65	165	8.12e-11	60.1

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180003477.01.T01	AT4G38180	35.955	178	110	3	6	179	69	246	5.27e-28	111
MsG0180003477.01.T01	AT4G15090	29.327	208	135	6	3	200	44	249	7.00e-18	82.0
MsG0180003477.01.T01	AT4G15090	29.327	208	135	6	3	200	44	249	7.00e-18	82.0
MsG0180003477.01.T01	AT4G15090	29.327	208	135	6	3	200	44	249	7.00e-18	82.0
MsG0180003477.01.T01	AT4G15090	29.327	208	135	6	3	200	44	249	7.00e-18	82.0
MsG0180003477.01.T01	AT4G15090	29.327	208	135	6	3	200	44	249	7.00e-18	82.0
MsG0180003477.01.T01	AT3G59470	42.991	107	53	4	9	111	69	171	9.21e-16	73.9
MsG0180003477.01.T01	AT3G59470	42.991	107	53	4	9	111	69	171	9.21e-16	73.9
MsG0180003477.01.T01	AT3G59470	42.991	107	53	4	9	111	81	183	1.11e-15	73.9
MsG0180003477.01.T01	AT5G28530	26.036	169	120	2	10	173	55	223	1.30e-14	72.4
MsG0180003477.01.T01	AT5G28530	26.036	169	120	2	10	173	55	223	1.41e-14	72.4
MsG0180003477.01.T01	AT5G28530	26.036	169	120	2	10	173	55	223	1.41e-14	72.4
MsG0180003477.01.T01	AT5G28530	26.036	169	120	2	10	173	55	223	1.43e-14	72.4
MsG0180003477.01.T01	AT5G28530	26.036	169	120	2	10	173	55	223	1.43e-14	72.4
MsG0180003477.01.T01	AT5G18960	37.719	114	51	4	9	116	42	141	1.46e-13	69.3
MsG0180003477.01.T01	AT5G18960	37.719	114	51	4	9	116	42	141	1.46e-13	69.3
MsG0180003477.01.T01	AT3G06250	36.538	104	50	3	9	110	27	116	1.88e-12	66.2
MsG0180003477.01.T01	AT3G06250	36.538	104	50	3	9	110	27	116	1.88e-12	66.2
MsG0180003477.01.T01	AT3G06250	36.538	104	50	3	9	110	27	116	1.88e-12	66.2
MsG0180003477.01.T01	AT1G76320	31.884	138	81	5	14	149	1	127	4.40e-12	65.1
MsG0180003477.01.T01	AT1G76320	31.884	138	81	5	14	149	1	127	4.65e-12	65.1
MsG0180003477.01.T01	AT1G76320	31.884	138	81	5	14	149	1	127	4.65e-12	65.1
MsG0180003477.01.T01	AT1G76320	31.884	138	81	5	14	149	1	127	5.66e-12	64.7
MsG0180003477.01.T01	AT2G43280	36.429	140	80	5	3	135	12	149	9.79e-12	62.4
MsG0180003477.01.T01	AT3G22170	33.333	117	64	3	9	111	69	185	1.13e-11	63.9
MsG0180003477.01.T01	AT3G22170	33.333	117	64	3	9	111	69	185	1.13e-11	63.9
MsG0180003477.01.T01	AT4G12850	34.615	104	62	3	9	110	10	109	2.28e-11	59.7
MsG0180003477.01.T01	AT4G12850	34.615	104	62	3	9	110	10	109	4.72e-11	58.9
MsG0180003477.01.T01	AT3G07500	38.095	105	62	3	9	111	32	135	8.77e-11	59.7
MsG0180003477.01.T02	AT4G38180	35.882	170	105	3	1	166	77	246	3.66e-26	105
MsG0180003477.01.T02	AT4G15090	28.426	197	129	6	1	187	55	249	3.47e-14	70.9
MsG0180003477.01.T02	AT4G15090	28.426	197	129	6	1	187	55	249	3.47e-14	70.9
MsG0180003477.01.T02	AT4G15090	28.426	197	129	6	1	187	55	249	3.47e-14	70.9
MsG0180003477.01.T02	AT4G15090	28.426	197	129	6	1	187	55	249	3.47e-14	70.9
MsG0180003477.01.T02	AT4G15090	28.426	197	129	6	1	187	55	249	3.47e-14	70.9
MsG0180003477.01.T02	AT3G59470	43.564	101	49	4	2	98	75	171	6.65e-14	68.6
MsG0180003477.01.T02	AT3G59470	43.564	101	49	4	2	98	75	171	6.65e-14	68.6
MsG0180003477.01.T02	AT3G59470	43.564	101	49	4	2	98	87	183	7.15e-14	68.6
MsG0180003477.01.T02	AT5G28530	25.767	163	116	2	3	160	61	223	2.43e-13	68.6
MsG0180003477.01.T02	AT5G28530	25.767	163	116	2	3	160	61	223	2.43e-13	68.6
MsG0180003477.01.T02	AT5G28530	25.767	163	116	2	3	160	61	223	2.74e-13	68.2
MsG0180003477.01.T02	AT5G28530	25.767	163	116	2	3	160	61	223	2.77e-13	68.2
MsG0180003477.01.T02	AT5G28530	25.767	163	116	2	3	160	61	223	2.92e-13	68.2
MsG0180003477.01.T02	AT1G76320	31.884	138	81	5	1	136	1	127	3.20e-12	65.1
MsG0180003477.01.T02	AT1G76320	31.884	138	81	5	1	136	1	127	3.39e-12	65.1
MsG0180003477.01.T02	AT1G76320	31.884	138	81	5	1	136	1	127	3.39e-12	65.1
MsG0180003477.01.T02	AT1G76320	31.884	138	81	5	1	136	1	127	3.59e-12	65.1
MsG0180003477.01.T02	AT5G18960	37.615	109	48	4	1	103	47	141	1.02e-11	63.5
MsG0180003477.01.T02	AT5G18960	37.615	109	48	4	1	103	47	141	1.02e-11	63.5

Find 34 sgRNAs with CRISPR-Local

Find 42 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ATGGTGTTATACCCTAATTT+TGG	0.308981	1:+63001486	MsG0180003477.01.T01:CDS
TGGCCGGTGACGCTGGATTA+AGG	0.317732	1:+63001355	MsG0180003477.01.T01:CDS
TGGAATCTTCAAATGTTGAT+TGG	0.360826	1:+63000953	MsG0180003477.01.T01:CDS
TTGGAATGGAATTTGACAAT+AGG	0.381885	1:+63000986	MsG0180003477.01.T01:CDS
TATAGTTTACGTGTGGGCTT+TGG	0.383954	1:+63001036	MsG0180003477.01.T01:CDS
TGGAATGGAATTTGACAATA+GGG	0.410954	1:+63000987	MsG0180003477.01.T01:CDS
TTTGCAATCCGTTCTAGTCT+CGG	0.426534	1:-63001184	None:intergenic
TCAAATTCCATTCCAAGTCT+TGG	0.427302	1:-63000979	None:intergenic
ATTGATCTGGCCGGTGACGC+TGG	0.433770	1:+63001348	MsG0180003477.01.T01:CDS
AGTGTAAAACAATAGCAAAT+TGG	0.436261	1:-63001575	None:intergenic
TATGTTCTTCTACAAACTCA+TGG	0.469178	1:-63001248	None:intergenic
ATGTAGGTTAGTTTGTTGTA+AGG	0.469751	1:+63001107	MsG0180003477.01.T01:CDS
AGGTTAGTTTGTTGTAAGGA+AGG	0.473909	1:+63001111	MsG0180003477.01.T01:CDS
TAATAGACATATATCAAAGA+TGG	0.494800	1:-63001538	None:intergenic
GTTGATTGGAAGCCAAGACT+TGG	0.497681	1:+63000967	MsG0180003477.01.T01:CDS
AAGAGACAACACACATGCTT+CGG	0.511596	1:+63001289	MsG0180003477.01.T01:CDS
TTGGAAGCCAAGACTTGGAA+TGG	0.513444	1:+63000972	MsG0180003477.01.T01:CDS
TCTTGCTTATAGTTTACGTG+TGG	0.516365	1:+63001029	MsG0180003477.01.T01:CDS
CTGCCTTAATCCAGCGTCAC+CGG	0.520024	1:-63001358	None:intergenic
GGTTAGTTTGTTGTAAGGAA+GGG	0.522823	1:+63001112	MsG0180003477.01.T01:CDS
ACAAGCATATGAGATTGATC+TGG	0.546185	1:+63001335	MsG0180003477.01.T01:CDS
CTTGCTTATAGTTTACGTGT+GGG	0.546798	1:+63001030	MsG0180003477.01.T01:CDS
GGAATTTGACAATAGGGATG+AGG	0.550860	1:+63000993	MsG0180003477.01.T01:CDS
GCAGGGCATAAAGCGAATGT+TGG	0.554631	1:+63001411	MsG0180003477.01.T01:CDS
ACGGTAGTATATCATCATGT+AGG	0.560502	1:+63001091	MsG0180003477.01.T01:CDS
CAACTTATGAGTACACAAGC+AGG	0.564826	1:+63001393	MsG0180003477.01.T01:CDS
TTTGTTGTAAGGAAGGGCTA+CGG	0.575163	1:+63001118	MsG0180003477.01.T01:CDS
AGCGAATGTTGGATTTACGC+AGG	0.606313	1:+63001422	MsG0180003477.01.T01:CDS
GCATATGAGATTGATCTGGC+CGG	0.620217	1:+63001339	MsG0180003477.01.T01:CDS
AACTTATGAGTACACAAGCA+GGG	0.621795	1:+63001394	MsG0180003477.01.T01:CDS
TCATAGAGCCGAGACTAGAA+CGG	0.629230	1:+63001176	MsG0180003477.01.T01:CDS
TGACGCTGGATTAAGGCAGA+AGG	0.630560	1:+63001362	MsG0180003477.01.T01:CDS
AATGCAAACAAGAAGAAAGA+CGG	0.644809	1:+63001072	MsG0180003477.01.T01:CDS
GAATGTTGGATTTACGCAGG+TGG	0.712986	1:+63001425	MsG0180003477.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AATATCACTTTCACTAAAAA+AGG	+	Chr1:63001212-63001231	MsG0180003477.01.T01:CDS	20.0%
!!	ATATCACTTTCACTAAAAAA+GGG	+	Chr1:63001213-63001232	MsG0180003477.01.T01:CDS	20.0%
!!	TAATAGACATATATCAAAGA+TGG	-	Chr1:63001541-63001560	None:intergenic	20.0%
!!!	TATTTTGAGCAAGTATTTTT+AGG	-	Chr1:63001513-63001532	None:intergenic	20.0%
!!!	TATTTTTAGGTCCAAAATTA+GGG	-	Chr1:63001500-63001519	None:intergenic	20.0%
!	AGTGTAAAACAATAGCAAAT+TGG	-	Chr1:63001578-63001597	None:intergenic	25.0%
!!!	GTATTTTTAGGTCCAAAATT+AGG	-	Chr1:63001501-63001520	None:intergenic	25.0%
	AATGCAAACAAGAAGAAAGA+CGG	+	Chr1:63001072-63001091	MsG0180003477.01.T01:CDS	30.0%
	TATGTTCTTCTACAAACTCA+TGG	-	Chr1:63001251-63001270	None:intergenic	30.0%
	TGCAAAAAGACAAAGAAGTA+TGG	+	Chr1:63001467-63001486	MsG0180003477.01.T01:CDS	30.0%
	TGGAATCTTCAAATGTTGAT+TGG	+	Chr1:63000953-63000972	MsG0180003477.01.T01:CDS	30.0%
	TGGAATGGAATTTGACAATA+GGG	+	Chr1:63000987-63001006	MsG0180003477.01.T01:CDS	30.0%
	TTCACTAAAAAAGGGAAAGT+TGG	+	Chr1:63001221-63001240	MsG0180003477.01.T01:CDS	30.0%
	TTGGAATGGAATTTGACAAT+AGG	+	Chr1:63000986-63001005	MsG0180003477.01.T01:CDS	30.0%
!!	ATGTAGGTTAGTTTGTTGTA+AGG	+	Chr1:63001107-63001126	MsG0180003477.01.T01:CDS	30.0%
!!!	ATGGTGTTATACCCTAATTT+TGG	+	Chr1:63001486-63001505	MsG0180003477.01.T01:CDS	30.0%
	AACTTATGAGTACACAAGCA+GGG	+	Chr1:63001394-63001413	MsG0180003477.01.T01:CDS	35.0%
	ACAAGCATATGAGATTGATC+TGG	+	Chr1:63001335-63001354	MsG0180003477.01.T01:CDS	35.0%
	ACGGTAGTATATCATCATGT+AGG	+	Chr1:63001091-63001110	MsG0180003477.01.T01:CDS	35.0%
	CTTGCTTATAGTTTACGTGT+GGG	+	Chr1:63001030-63001049	MsG0180003477.01.T01:CDS	35.0%
	GAGAAAAAAGATGCACATCA+AGG	+	Chr1:63001147-63001166	MsG0180003477.01.T01:CDS	35.0%
	TCAAATTCCATTCCAAGTCT+TGG	-	Chr1:63000982-63001001	None:intergenic	35.0%
	TCTTGCTTATAGTTTACGTG+TGG	+	Chr1:63001029-63001048	MsG0180003477.01.T01:CDS	35.0%
!!	AGGTTAGTTTGTTGTAAGGA+AGG	+	Chr1:63001111-63001130	MsG0180003477.01.T01:CDS	35.0%
!!	GGTTAGTTTGTTGTAAGGAA+GGG	+	Chr1:63001112-63001131	MsG0180003477.01.T01:CDS	35.0%
	AAGAGACAACACACATGCTT+CGG	+	Chr1:63001289-63001308	MsG0180003477.01.T01:CDS	40.0%
	CAACTTATGAGTACACAAGC+AGG	+	Chr1:63001393-63001412	MsG0180003477.01.T01:CDS	40.0%
	GGAATTTGACAATAGGGATG+AGG	+	Chr1:63000993-63001012	MsG0180003477.01.T01:CDS	40.0%
	TATAGTTTACGTGTGGGCTT+TGG	+	Chr1:63001036-63001055	MsG0180003477.01.T01:CDS	40.0%
	TTTGCAATCCGTTCTAGTCT+CGG	-	Chr1:63001187-63001206	None:intergenic	40.0%
!	TTTGTTGTAAGGAAGGGCTA+CGG	+	Chr1:63001118-63001137	MsG0180003477.01.T01:CDS	40.0%
	AGCGAATGTTGGATTTACGC+AGG	+	Chr1:63001422-63001441	MsG0180003477.01.T01:CDS	45.0%
	GAATGTTGGATTTACGCAGG+TGG	+	Chr1:63001425-63001444	MsG0180003477.01.T01:CDS	45.0%
	GCATATGAGATTGATCTGGC+CGG	+	Chr1:63001339-63001358	MsG0180003477.01.T01:CDS	45.0%
	GTTGATTGGAAGCCAAGACT+TGG	+	Chr1:63000967-63000986	MsG0180003477.01.T01:CDS	45.0%
	TCATAGAGCCGAGACTAGAA+CGG	+	Chr1:63001176-63001195	MsG0180003477.01.T01:CDS	45.0%
	TTGGAAGCCAAGACTTGGAA+TGG	+	Chr1:63000972-63000991	MsG0180003477.01.T01:CDS	45.0%
	GCAGGGCATAAAGCGAATGT+TGG	+	Chr1:63001411-63001430	MsG0180003477.01.T01:CDS	50.0%
	TGACGCTGGATTAAGGCAGA+AGG	+	Chr1:63001362-63001381	MsG0180003477.01.T01:CDS	50.0%
	CTGCCTTAATCCAGCGTCAC+CGG	-	Chr1:63001361-63001380	None:intergenic	55.0%
	ATTGATCTGGCCGGTGACGC+TGG	+	Chr1:63001348-63001367	MsG0180003477.01.T01:CDS	60.0%
	TGGCCGGTGACGCTGGATTA+AGG	+	Chr1:63001355-63001374	MsG0180003477.01.T01:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
Chr1	gene	63000952	63001599	63000952	ID=MsG0180003477.01;Name=MsG0180003477.01
Chr1	mRNA	63000952	63001599	63000952	ID=MsG0180003477.01.T01;Parent=MsG0180003477.01;Name=MsG0180003477.01.T01;_AED=0.29;_eAED=0.29;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|215
Chr1	exon	63000952	63001599	63000952	ID=MsG0180003477.01.T01:exon:23568;Parent=MsG0180003477.01.T01
Chr1	CDS	63000952	63001599	63000952	ID=MsG0180003477.01.T01:cds;Parent=MsG0180003477.01.T01
Chr1	mRNA	63000991	63001599	63000991	ID=MsG0180003477.01.T02;Parent=MsG0180003477.01;Name=MsG0180003477.01.T02;_AED=0.31;_eAED=0.31;_QI=0\|-1\|0\|1\|-1\|0\|1\|0\|202
Chr1	exon	63000991	63001599	63000991	ID=MsG0180003477.01.T02:exon:23569;Parent=MsG0180003477.01.T02
Chr1	CDS	63000991	63001599	63000991	ID=MsG0180003477.01.T02:cds;Parent=MsG0180003477.01.T02

Gene Sequence

>MsG0180003477.01.T01

ATGGAATCTTCAAATGTTGATTGGAAGCCAAGACTTGGAATGGAATTTGACAATAGGGATGAGGCTTATCAATTTTATCTTGCTTATAGTTTACGTGTGGGCTTTGGAGTTAGAAAACGTAATGCAAACAAGAAGAAAGACGGTAGTATATCATCATGTAGGTTAGTTTGTTGTAAGGAAGGGCTACGGAATAAAGAGAAAAAAGATGCACATCAAGGAAAAATTCATAGAGCCGAGACTAGAACGGATTGCAAAGCAAGAATATCACTTTCACTAAAAAAGGGAAAGTTGGTCATCCATGAGTTTGTAGAAGAACATAATCATGATCTACTAATAGAAGAGACAACACACATGCTTCGGTCACATAGAAAGATAACTGAAGTACAAGCATATGAGATTGATCTGGCCGGTGACGCTGGATTAAGGCAGAAGGCTACATTTCAACTTATGAGTACACAAGCAGGGCATAAAGCGAATGTTGGATTTACGCAGGTGGATGTTAGAAACTACATCACTGCAAAAAGACAAAGAAGTATGGTGTTATACCCTAATTTTGGACCTAAAAATACTTGCTCAAAATATTTTTCCATCTTTGATATATGTCTATTACTCTTGAAAGATTGCCAATTTGCTATTGTTTTACACTAA

>MsG0180003477.01.T02

ATGGAATTTGACAATAGGGATGAGGCTTATCAATTTTATCTTGCTTATAGTTTACGTGTGGGCTTTGGAGTTAGAAAACGTAATGCAAACAAGAAGAAAGACGGTAGTATATCATCATGTAGGTTAGTTTGTTGTAAGGAAGGGCTACGGAATAAAGAGAAAAAAGATGCACATCAAGGAAAAATTCATAGAGCCGAGACTAGAACGGATTGCAAAGCAAGAATATCACTTTCACTAAAAAAGGGAAAGTTGGTCATCCATGAGTTTGTAGAAGAACATAATCATGATCTACTAATAGAAGAGACAACACACATGCTTCGGTCACATAGAAAGATAACTGAAGTACAAGCATATGAGATTGATCTGGCCGGTGACGCTGGATTAAGGCAGAAGGCTACATTTCAACTTATGAGTACACAAGCAGGGCATAAAGCGAATGTTGGATTTACGCAGGTGGATGTTAGAAACTACATCACTGCAAAAAGACAAAGAAGTATGGTGTTATACCCTAATTTTGGACCTAAAAATACTTGCTCAAAATATTTTTCCATCTTTGATATATGTCTATTACTCTTGAAAGATTGCCAATTTGCTATTGTTTTACACTAA

Protein sequence

>MsG0180003477.01.T01

MESSNVDWKPRLGMEFDNRDEAYQFYLAYSLRVGFGVRKRNANKKKDGSISSCRLVCCKEGLRNKEKKDAHQGKIHRAETRTDCKARISLSLKKGKLVIHEFVEEHNHDLLIEETTHMLRSHRKITEVQAYEIDLAGDAGLRQKATFQLMSTQAGHKANVGFTQVDVRNYITAKRQRSMVLYPNFGPKNTCSKYFSIFDICLLLLKDCQFAIVLH*

>MsG0180003477.01.T02

MEFDNRDEAYQFYLAYSLRVGFGVRKRNANKKKDGSISSCRLVCCKEGLRNKEKKDAHQGKIHRAETRTDCKARISLSLKKGKLVIHEFVEEHNHDLLIEETTHMLRSHRKITEVQAYEIDLAGDAGLRQKATFQLMSTQAGHKANVGFTQVDVRNYITAKRQRSMVLYPNFGPKNTCSKYFSIFDICLLLLKDCQFAIVLH*