AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180003909.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180003909.01.T01 MTR_1g070870 99.645 282 1 0 1 282 1 282 0.0 576
MsG0180003909.01.T01 MTR_1g070870 98.596 285 1 1 1 282 1 285 0.0 570
MsG0180003909.01.T01 MTR_1g080890 80.571 175 34 0 104 278 177 351 3.99e-97 290
MsG0180003909.01.T01 MTR_4g131160 65.854 164 46 3 108 262 184 346 1.97e-63 204
MsG0180003909.01.T01 MTR_4g131160 65.854 164 46 3 108 262 187 349 2.19e-63 204
MsG0180003909.01.T01 MTR_1g017350 51.579 95 45 1 91 184 231 325 1.32e-22 96.7
MsG0180003909.01.T01 MTR_1g017350 51.579 95 45 1 91 184 231 325 1.42e-22 96.7
MsG0180003909.01.T01 MTR_1g017350 51.579 95 45 1 91 184 231 325 1.76e-22 96.7
MsG0180003909.01.T01 MTR_1g017350 51.579 95 45 1 91 184 231 325 1.87e-22 96.3
MsG0180003909.01.T01 MTR_7g053410 60.000 75 29 1 111 184 308 382 5.83e-22 95.5
MsG0180003909.01.T01 MTR_7g053410 60.000 75 29 1 111 184 308 382 6.00e-22 95.5
MsG0180003909.01.T01 MTR_8g012290 60.000 75 29 1 111 184 282 356 9.90e-22 94.7
MsG0180003909.01.T01 MTR_3g498825 48.980 98 49 1 112 208 139 236 1.01e-21 93.2
MsG0180003909.01.T01 MTR_8g012290 60.000 75 29 1 111 184 282 356 1.03e-21 94.7
MsG0180003909.01.T01 MTR_3g116770 65.152 66 22 1 120 184 191 256 6.41e-21 91.7
MsG0180003909.01.T01 MTR_3g116770 65.152 66 22 1 120 184 191 256 6.59e-21 91.7
MsG0180003909.01.T01 MTR_8g065740 63.636 66 23 1 120 184 305 370 3.95e-20 90.1
MsG0180003909.01.T01 MTR_4g070320 63.636 66 23 1 120 184 143 208 4.68e-20 89.0
MsG0180003909.01.T01 MTR_5g037250 56.000 75 32 1 111 184 103 177 7.49e-20 86.3
MsG0180003909.01.T01 MTR_5g048860 62.687 67 24 1 119 184 364 430 9.01e-20 89.4
MsG0180003909.01.T01 MTR_8g062240 60.606 66 25 1 120 184 151 216 1.90e-19 86.3
MsG0180003909.01.T01 MTR_8g099880 50.588 85 37 2 119 202 144 224 2.20e-19 86.7
MsG0180003909.01.T01 MTR_4g033295 61.538 65 24 1 119 182 117 181 1.54e-18 81.6
MsG0180003909.01.T01 MTR_4g033295 62.121 66 24 1 119 183 117 182 2.61e-18 81.3
MsG0180003909.01.T01 MTR_1g084980 50.000 74 33 1 122 195 464 533 9.65e-18 83.6
MsG0180003909.01.T01 MTR_1g072530 33.571 140 81 1 126 265 190 317 9.84e-18 82.0
MsG0180003909.01.T01 MTR_1g018090 58.462 65 27 0 119 183 273 337 1.62e-17 82.0
MsG0180003909.01.T01 MTR_1g052470 54.667 75 33 1 113 186 291 365 2.08e-17 81.6
MsG0180003909.01.T01 MTR_3g103030 48.780 82 42 0 119 200 228 309 3.45e-17 80.5
MsG0180003909.01.T01 MTR_1g059270 48.864 88 39 3 119 205 159 241 3.77e-17 79.3
MsG0180003909.01.T01 MTR_1g059270 48.864 88 39 3 119 205 159 241 4.32e-17 80.1
MsG0180003909.01.T01 MTR_1g069155 50.000 72 32 1 122 193 319 386 5.22e-17 81.3
MsG0180003909.01.T01 MTR_7g099540 50.000 72 32 1 122 193 254 321 5.41e-17 80.9
MsG0180003909.01.T01 MTR_5g005110 56.923 65 28 0 119 183 223 287 7.22e-17 79.7
MsG0180003909.01.T01 MTR_1g019240 42.697 89 44 2 100 188 71 152 8.96e-17 78.6
MsG0180003909.01.T01 MTR_7g092510 56.716 67 28 1 119 184 172 238 4.64e-16 77.4
MsG0180003909.01.T01 MTR_7g110810 53.571 56 26 0 131 186 213 268 5.25e-16 77.4
MsG0180003909.01.T01 MTR_1g106470 51.316 76 37 0 108 183 184 259 6.01e-16 76.6
MsG0180003909.01.T01 MTR_7g099540 45.070 71 39 0 122 192 254 324 8.79e-16 77.4
MsG0180003909.01.T01 MTR_2g098310 56.061 66 28 1 119 183 331 396 9.45e-16 77.0
MsG0180003909.01.T01 MTR_3g101810 48.750 80 40 1 113 192 164 242 1.75e-15 75.1
MsG0180003909.01.T01 MTR_7g111320 47.368 76 37 1 122 197 434 506 1.89e-15 76.6
MsG0180003909.01.T01 MTR_8g036235 52.174 69 32 1 119 186 315 383 2.14e-15 75.9
MsG0180003909.01.T01 MTR_7g092540 47.561 82 33 2 103 183 235 307 2.30e-15 75.1
MsG0180003909.01.T01 MTR_7g092540 45.882 85 36 2 103 186 235 310 2.82e-15 75.1
MsG0180003909.01.T01 MTR_3g449770 49.206 63 32 0 122 184 311 373 2.98e-15 75.9
MsG0180003909.01.T01 MTR_4g065870 53.623 69 31 1 119 186 354 422 3.13e-15 75.5
MsG0180003909.01.T01 MTR_5g079500 41.304 92 50 2 93 183 193 281 3.99e-15 74.3
MsG0180003909.01.T01 MTR_2g098310 55.385 65 28 1 119 182 331 395 7.53e-15 74.3
MsG0180003909.01.T01 MTR_1g106460 47.059 68 36 0 116 183 234 301 8.38e-15 73.6
MsG0180003909.01.T01 MTR_5g017040 41.304 92 46 2 131 217 116 204 1.67e-14 73.2
MsG0180003909.01.T01 MTR_8g093500 49.333 75 38 0 108 182 102 176 2.03e-14 72.0
MsG0180003909.01.T01 MTR_1g072530 33.333 126 72 1 126 251 190 303 2.94e-14 72.0
MsG0180003909.01.T01 MTR_6g084120 57.627 59 24 1 120 177 155 213 3.30e-14 71.2
MsG0180003909.01.T01 MTR_3g028520 53.030 66 30 1 119 183 321 386 9.31e-14 71.2
MsG0180003909.01.T01 MTR_3g027650 53.030 66 30 1 119 183 321 386 9.31e-14 71.2
MsG0180003909.01.T01 MTR_4g065870 53.968 63 28 1 119 180 354 416 1.05e-13 70.9
MsG0180003909.01.T01 MTR_3g027650 54.688 64 28 1 119 181 321 384 4.25e-13 69.3
MsG0180003909.01.T01 MTR_1g106480 50.000 66 33 0 119 184 68 133 5.54e-13 65.9
MsG0180003909.01.T01 MTR_7g069590 47.170 53 28 0 127 179 33 85 6.96e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180003909.01.T01 AT4G02590 70.358 307 64 7 2 281 3 309 9.29e-130 371
MsG0180003909.01.T01 AT4G02590 70.358 307 64 7 2 281 3 309 9.29e-130 371
MsG0180003909.01.T01 AT4G02590 78.723 235 44 4 53 281 12 246 2.00e-115 332
MsG0180003909.01.T01 AT1G03040 68.919 296 62 8 8 282 16 302 1.61e-112 327
MsG0180003909.01.T01 AT1G03040 63.240 321 69 7 8 282 16 333 3.77e-108 317
MsG0180003909.01.T01 AT1G03040 67.797 295 62 9 8 282 16 297 4.70e-108 315
MsG0180003909.01.T01 AT2G24260 65.359 153 48 2 113 262 28 178 1.28e-62 198
MsG0180003909.01.T01 AT2G24260 65.359 153 48 2 113 262 131 281 1.49e-60 196
MsG0180003909.01.T01 AT5G58010 49.541 218 81 5 72 276 62 263 3.12e-60 193
MsG0180003909.01.T01 AT4G30980 57.714 175 64 2 106 280 116 280 6.67e-59 190
MsG0180003909.01.T01 AT4G30980 57.714 175 64 2 106 280 164 328 1.14e-58 191
MsG0180003909.01.T01 AT5G50915 53.333 90 37 2 112 200 128 213 2.68e-23 96.3
MsG0180003909.01.T01 AT5G50915 53.333 90 37 2 112 200 128 213 2.68e-23 96.3
MsG0180003909.01.T01 AT5G50915 53.333 90 37 2 112 200 128 213 3.12e-23 96.7
MsG0180003909.01.T01 AT5G50915 53.333 90 37 2 112 200 128 213 3.12e-23 96.7
MsG0180003909.01.T01 AT5G48560 61.333 75 28 1 111 184 292 366 3.66e-22 95.9
MsG0180003909.01.T01 AT5G48560 61.333 75 28 1 111 184 292 366 3.76e-22 96.3
MsG0180003909.01.T01 AT3G23690 45.378 119 55 3 67 184 147 256 4.77e-21 92.0
MsG0180003909.01.T01 AT1G10120 64.179 67 23 1 119 184 205 271 9.73e-21 90.9
MsG0180003909.01.T01 AT1G10120 64.179 67 23 1 119 184 205 271 9.73e-21 90.9
MsG0180003909.01.T01 AT3G07340 64.179 67 23 1 119 184 257 323 1.44e-20 91.3
MsG0180003909.01.T01 AT3G07340 65.152 66 22 1 120 184 258 323 1.53e-20 91.3
MsG0180003909.01.T01 AT4G34530 62.687 67 24 1 119 184 171 237 1.57e-20 90.1
MsG0180003909.01.T01 AT1G68920 63.636 66 23 1 120 184 302 367 2.48e-20 90.9
MsG0180003909.01.T01 AT1G68920 63.636 66 23 1 120 184 303 368 2.54e-20 90.9
MsG0180003909.01.T01 AT1G68920 63.636 66 23 1 120 184 303 368 2.54e-20 90.9
MsG0180003909.01.T01 AT1G68920 63.636 66 23 1 120 184 303 368 2.54e-20 90.9
MsG0180003909.01.T01 AT5G62610 37.594 133 67 3 111 227 144 276 4.68e-20 87.8
MsG0180003909.01.T01 AT5G62610 37.594 133 67 3 111 227 144 276 4.68e-20 87.8
MsG0180003909.01.T01 AT1G26260 52.273 88 36 3 119 205 171 253 7.48e-20 88.2
MsG0180003909.01.T01 AT1G26260 52.273 88 36 3 119 205 200 282 7.49e-20 88.6
MsG0180003909.01.T01 AT1G26260 52.273 88 36 3 119 205 222 304 1.02e-19 88.6
MsG0180003909.01.T01 AT1G26260 52.273 88 36 3 119 205 222 304 1.02e-19 88.6
MsG0180003909.01.T01 AT1G26260 52.273 88 36 3 119 205 222 304 1.02e-19 88.6
MsG0180003909.01.T01 AT1G26260 52.273 88 36 3 119 205 222 304 1.02e-19 88.6
MsG0180003909.01.T01 AT4G33880 51.685 89 43 0 116 204 262 350 2.34e-19 87.0
MsG0180003909.01.T01 AT2G18300 60.606 66 25 1 120 184 185 250 2.37e-19 86.7
MsG0180003909.01.T01 AT2G18300 60.606 66 25 1 120 184 185 250 2.40e-19 86.7
MsG0180003909.01.T01 AT2G18300 60.606 66 25 1 120 184 185 250 3.33e-19 86.7
MsG0180003909.01.T01 AT1G25330 52.326 86 39 2 112 196 96 180 3.65e-19 84.3
MsG0180003909.01.T01 AT1G59640 60.606 66 25 1 120 184 136 201 4.81e-19 84.7
MsG0180003909.01.T01 AT1G73830 62.121 66 24 1 120 184 147 212 4.90e-19 84.7
MsG0180003909.01.T01 AT1G73830 62.121 66 24 1 120 184 147 212 5.18e-19 84.7
MsG0180003909.01.T01 AT4G36540 59.091 66 26 1 120 184 141 206 8.84e-19 84.7
MsG0180003909.01.T01 AT4G36540 59.091 66 26 1 120 184 141 206 9.06e-19 84.7
MsG0180003909.01.T01 AT2G14760 50.575 87 43 0 116 202 233 319 1.17e-18 84.7
MsG0180003909.01.T01 AT1G59640 60.606 66 25 1 120 184 136 201 1.49e-18 84.7
MsG0180003909.01.T01 AT1G18400 56.000 75 31 2 119 192 144 217 2.20e-18 82.8
MsG0180003909.01.T01 AT1G18400 60.606 66 25 1 120 184 145 210 4.40e-18 82.0
MsG0180003909.01.T01 AT3G57800 39.416 137 58 3 120 231 204 340 4.92e-18 83.6
MsG0180003909.01.T01 AT1G27740 43.158 95 53 1 90 183 136 230 9.33e-18 81.3
MsG0180003909.01.T01 AT2G42300 43.697 119 54 5 119 229 184 297 2.15e-17 81.3
MsG0180003909.01.T01 AT4G09180 60.606 66 25 1 119 183 183 248 2.83e-17 79.7
MsG0180003909.01.T01 AT1G09530 50.000 64 32 0 122 185 339 402 4.23e-17 81.3
MsG0180003909.01.T01 AT1G09530 50.000 64 32 0 122 185 339 402 4.23e-17 81.3
MsG0180003909.01.T01 AT1G09530 50.000 64 32 0 122 185 339 402 4.23e-17 81.3
MsG0180003909.01.T01 AT1G09530 50.000 64 32 0 122 185 339 402 4.23e-17 81.3
MsG0180003909.01.T01 AT1G09530 50.000 64 32 0 122 185 339 402 4.23e-17 81.3
MsG0180003909.01.T01 AT1G09530 50.000 64 32 0 122 185 339 402 4.23e-17 81.3
MsG0180003909.01.T01 AT1G35460 60.606 66 25 1 119 183 180 245 6.22e-17 79.0
MsG0180003909.01.T01 AT2G42300 54.023 87 34 4 120 205 185 266 7.89e-17 79.0
MsG0180003909.01.T01 AT2G42280 56.522 69 29 1 119 186 278 346 8.26e-17 79.7
MsG0180003909.01.T01 AT2G20180 50.794 63 31 0 122 184 209 271 9.95e-17 80.1
MsG0180003909.01.T01 AT2G20180 50.794 63 31 0 122 184 209 271 9.95e-17 80.1
MsG0180003909.01.T01 AT2G20180 50.794 63 31 0 122 184 209 271 9.95e-17 80.1
MsG0180003909.01.T01 AT2G20180 50.794 63 31 0 122 184 280 342 1.36e-16 79.7
MsG0180003909.01.T01 AT2G20180 50.794 63 31 0 122 184 280 342 1.36e-16 79.7
MsG0180003909.01.T01 AT2G20180 50.794 63 31 0 122 184 280 342 1.36e-16 79.7
MsG0180003909.01.T01 AT2G20180 50.794 63 31 0 122 184 280 342 1.36e-16 79.7
MsG0180003909.01.T01 AT2G14760 45.000 100 42 1 116 202 233 332 2.88e-16 78.2
MsG0180003909.01.T01 AT5G43175 49.275 69 35 0 115 183 127 195 3.00e-16 76.3
MsG0180003909.01.T01 AT2G42280 59.375 64 25 1 119 181 278 341 8.78e-16 77.0
MsG0180003909.01.T01 AT2G20180 51.667 60 29 0 122 181 280 339 1.32e-15 76.3
MsG0180003909.01.T01 AT1G51140 55.072 69 30 1 119 186 303 371 5.68e-15 74.7
MsG0180003909.01.T01 AT3G21330 60.714 56 22 0 127 182 276 331 1.17e-14 73.6
MsG0180003909.01.T01 AT1G66470 47.945 73 37 1 129 200 204 276 1.63e-14 72.8
MsG0180003909.01.T01 AT5G37800 47.945 73 37 1 129 200 210 282 2.51e-14 72.0
MsG0180003909.01.T01 AT4G36930 50.847 59 29 0 126 184 197 255 4.27e-14 72.0
MsG0180003909.01.T01 AT5G67110 50.847 59 28 1 131 188 98 156 1.06e-13 68.9
MsG0180003909.01.T01 AT4G28790 44.118 68 38 0 117 184 268 335 2.06e-13 70.1
MsG0180003909.01.T01 AT4G00050 45.312 64 35 0 120 183 105 168 2.48e-13 69.3
MsG0180003909.01.T01 AT4G00050 45.312 64 35 0 120 183 207 270 4.95e-13 68.9
MsG0180003909.01.T01 AT4G00050 45.312 64 35 0 120 183 207 270 6.02e-13 68.6
MsG0180003909.01.T01 AT4G28815 43.860 57 32 0 123 179 71 127 9.23e-13 66.6
MsG0180003909.01.T01 AT2G46970 39.189 74 41 1 122 195 194 263 2.17e-12 67.0
MsG0180003909.01.T01 AT2G46970 39.189 74 41 1 122 195 225 294 2.23e-12 67.0
MsG0180003909.01.T01 AT2G46970 39.189 74 41 1 122 195 203 272 2.31e-12 67.0
MsG0180003909.01.T01 AT4G28815 43.860 57 32 0 123 179 147 203 2.35e-12 66.6
MsG0180003909.01.T01 AT2G43140 36.220 127 66 4 59 182 83 197 2.55e-12 65.1
MsG0180003909.01.T01 AT2G43140 53.846 65 29 1 119 182 230 294 2.77e-12 66.2
MsG0180003909.01.T01 AT5G01305 47.541 61 32 0 119 179 36 96 3.63e-12 63.9
MsG0180003909.01.T01 AT4G28800 36.000 75 44 1 123 197 252 322 4.55e-12 66.2
MsG0180003909.01.T01 AT2G43010 53.333 60 28 0 123 182 254 313 4.90e-12 66.2
MsG0180003909.01.T01 AT2G43010 53.333 60 28 0 123 182 254 313 4.93e-12 66.2
MsG0180003909.01.T01 AT4G28790 43.750 64 36 0 117 180 268 331 5.40e-12 65.9
MsG0180003909.01.T01 AT2G43010 53.333 60 28 0 123 182 261 320 5.45e-12 65.9
MsG0180003909.01.T01 AT3G59060 49.206 63 32 0 122 184 252 314 6.10e-12 65.9
MsG0180003909.01.T01 AT3G59060 49.206 63 32 0 122 184 252 314 6.10e-12 65.9
MsG0180003909.01.T01 AT3G59060 49.206 63 32 0 122 184 252 314 6.10e-12 65.9
MsG0180003909.01.T01 AT3G59060 49.206 63 32 0 122 184 252 314 6.37e-12 65.9
MsG0180003909.01.T01 AT2G43010 53.333 60 28 0 123 182 296 355 6.79e-12 65.9
MsG0180003909.01.T01 AT2G43010 53.333 60 28 0 123 182 254 313 7.30e-12 65.5
MsG0180003909.01.T01 AT4G00120 43.210 81 44 2 114 192 105 185 1.13e-11 63.2

Find 157 sgRNAs with CRISPR-Local

Find 340 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCGGGAGTGGGAAGCGTTTC+CGG 0.137108 1:-69989903 MsG0180003909.01.T01:CDS
TTATGTTAAGTTACATTCTT+AGG 0.274593 1:+69989859 None:intergenic
CGGGAGTGGGAAGCGTTTCC+GGG 0.277270 1:-69989902 MsG0180003909.01.T01:CDS
TCATGCACCGGTTTATCATT+TGG 0.277273 1:-69989980 MsG0180003909.01.T01:CDS
ATCGCCTCATCCACTACTTC+TGG 0.286394 1:-69986669 MsG0180003909.01.T01:three_prime_UTR
GTGGCTTGTTTGTTGACTAT+TGG 0.286493 1:-69985872 MsG0180003909.01.T01:three_prime_UTR
CAAATCAATGACTAAAATTA+AGG 0.288738 1:+69986615 None:intergenic
TATAGTAGCTTAGTATGAAT+TGG 0.293266 1:+69986062 None:intergenic
CATGCACCGGTTTATCATTT+GGG 0.298977 1:-69989979 MsG0180003909.01.T01:CDS
ATTACCTCGACTGACGATAA+TGG 0.304796 1:+69987039 None:intergenic
AAAGAATAGCTGAAAGAATC+AGG 0.320734 1:-69988538 MsG0180003909.01.T01:CDS
TATGGAAAATTTCTTGTAAA+GGG 0.323225 1:-69986466 MsG0180003909.01.T01:three_prime_UTR
AGTTTCAGGCTTAACTATAC+TGG 0.328183 1:+69986752 None:intergenic
TATGGAGGAGGAATAGTTTC+AGG 0.332933 1:+69986738 None:intergenic
TTGAAGCCTGATGAAGCTTC+CGG 0.337349 1:-69989922 MsG0180003909.01.T01:CDS
TCTCACCTTGGCGCTGGAGG+AGG 0.354681 1:-69990006 MsG0180003909.01.T01:CDS
AGCAGACCCTATCCTGTCTA+TGG 0.355480 1:-69986484 MsG0180003909.01.T01:three_prime_UTR
TGGATTATGTCAAATTCTTA+AGG 0.362058 1:-69987723 MsG0180003909.01.T01:CDS
TCTGAGTGACTAGTTGAAAA+TGG 0.367989 1:+69990236 None:intergenic
CCTCTTCTTGCCCGCACTCT+AGG 0.371401 1:+69988733 None:intergenic
CGCACTCTAGGACGCATTGC+TGG 0.372225 1:+69988745 None:intergenic
CATCACTAATAAATACTATA+TGG 0.373746 1:+69986295 None:intergenic
TGAAGCCTGATGAAGCTTCC+GGG 0.376117 1:-69989921 MsG0180003909.01.T01:CDS
ATAGTAGCTTAGTATGAATT+GGG 0.382743 1:+69986063 None:intergenic
TTACCTCGACTGACGATAAT+GGG 0.384485 1:+69987040 None:intergenic
TTTAGTATTGTTCAGGAAGA+AGG 0.384905 1:-69986960 MsG0180003909.01.T01:intron
CATAAAGTTGCATTCAAAGT+AGG 0.388409 1:-69986592 MsG0180003909.01.T01:three_prime_UTR
CCACTCCCGGAAGCTTCATC+AGG 0.392070 1:+69989916 None:intergenic
GTGGGACCTTGTAAAAGGTT+AGG 0.393557 1:-69986325 MsG0180003909.01.T01:three_prime_UTR
AGCTCATGGAAGAAAATGTT+GGG 0.395774 1:-69986866 MsG0180003909.01.T01:CDS
CATTGTCGAAGGCATGTCTA+TGG 0.405574 1:+69986720 None:intergenic
GGGATGTGGGACCTTGTAAA+AGG 0.408505 1:-69986330 MsG0180003909.01.T01:three_prime_UTR
TGACTAAAATTAAGGAGGTT+AGG 0.414380 1:+69986623 None:intergenic
GATTTCCTTGAACAAATTCT+CGG 0.419929 1:-69990105 MsG0180003909.01.T01:CDS
CTATGGAAAATTTCTTGTAA+AGG 0.421865 1:-69986467 MsG0180003909.01.T01:three_prime_UTR
GCTGCCTCTCACCTTGGCGC+TGG 0.427725 1:-69990012 MsG0180003909.01.T01:CDS
CCGTCGGCGGAGGTGAAATT+CGG 0.429325 1:+69990078 None:intergenic
TTTGGGTTTGAGCTTGGACC+AGG 0.429629 1:-69989962 MsG0180003909.01.T01:CDS
TTATCATTTGGGTTTGAGCT+TGG 0.431085 1:-69989968 MsG0180003909.01.T01:CDS
CAGGAAGAAGGAAGTGAGAG+TGG 0.433710 1:-69986948 MsG0180003909.01.T01:CDS
GCCTCTCACCTTGGCGCTGG+AGG 0.436271 1:-69990009 MsG0180003909.01.T01:CDS
TGTTGAAATGCAATAGATAA+TGG 0.439562 1:-69986252 MsG0180003909.01.T01:three_prime_UTR
CTCACCTTGGCGCTGGAGGA+GGG 0.440875 1:-69990005 MsG0180003909.01.T01:CDS
TCACTTGAGAGTTAAGAATC+AGG 0.440998 1:+69985985 None:intergenic
GACTGATCGAGCTGCCATGC+TGG 0.444164 1:-69987755 MsG0180003909.01.T01:CDS
GGACGCATTGCTGGTGGTTG+TGG 0.449885 1:+69988754 None:intergenic
TCGCCTCATCCACTACTTCT+GGG 0.451100 1:-69986668 MsG0180003909.01.T01:three_prime_UTR
CTCAAACCCAAATGATAAAC+CGG 0.453773 1:+69989973 None:intergenic
GAAGACCGAGAATTTGTTCA+AGG 0.461614 1:+69990100 None:intergenic
TGGGAGAAACCAACCAGCTT+GGG 0.463571 1:-69986928 MsG0180003909.01.T01:CDS
GGCGACGCTGCCTCTCACCT+TGG 0.464276 1:-69990018 MsG0180003909.01.T01:CDS
GAGGCGATCGATGGGACCAC+TGG 0.476148 1:+69986684 None:intergenic
TTGAGCTTGGACCAGGGTAA+AGG 0.479838 1:-69989955 MsG0180003909.01.T01:CDS
TGGAGGAGGGTTTCATGCAC+CGG 0.480121 1:-69989992 MsG0180003909.01.T01:CDS
CCGGAAACGCTTCCCACTCC+CGG 0.481302 1:+69989903 None:intergenic
AAGGTGAGAGGCAGCGTCGC+CGG 0.485809 1:+69990020 None:intergenic
TTGTTGACTATTGGATGGAT+TGG 0.486343 1:-69985863 MsG0180003909.01.T01:three_prime_UTR
TCCCCACAGCATCGCTGAAA+GGG 0.487553 1:-69988698 MsG0180003909.01.T01:intron
CTTGTTTGTTGACTATTGGA+TGG 0.488344 1:-69985868 MsG0180003909.01.T01:three_prime_UTR
AGCTTAGTATGAATTGGGTT+AGG 0.488605 1:+69986068 None:intergenic
ATTCTTAAGGCTTCAAGTGA+AGG 0.492189 1:-69987710 MsG0180003909.01.T01:intron
ATTGCAGATGCCAGTGAGAT+GGG 0.492955 1:+69986801 None:intergenic
TTGGACCAGGGTAAAGGAGG+AGG 0.494681 1:-69989949 MsG0180003909.01.T01:CDS
CCTGATGAAGCTTCCGGGAG+TGG 0.498744 1:-69989916 MsG0180003909.01.T01:CDS
AGCGTCGGTTCCGTCGGCGG+AGG 0.501900 1:+69990068 None:intergenic
CCGAATTTCACCTCCGCCGA+CGG 0.502344 1:-69990078 MsG0180003909.01.T01:CDS
TTCAGACACAAGACACAAGA+AGG 0.502645 1:+69990267 None:intergenic
AGCCGGTGCAGTGGCTCCAC+TGG 0.503330 1:-69987073 MsG0180003909.01.T01:CDS
TGGGACCTTGTAAAAGGTTA+GGG 0.504824 1:-69986324 MsG0180003909.01.T01:three_prime_UTR
ATGAGTAGATTGGGTGGAGC+CGG 0.504884 1:-69987090 MsG0180003909.01.T01:CDS
GAAATCGTCGGCGGGTGTAT+CGG 0.505672 1:+69990122 None:intergenic
GGAGCAGCAGGAACTGTAGT+AGG 0.506388 1:+69988775 None:intergenic
TCACCCTTTCAGCGATGCTG+TGG 0.507317 1:+69988695 None:intergenic
CGGAGAAGCGTCGGTTCCGT+CGG 0.507774 1:+69990062 None:intergenic
GCTGGTGGTTGTGGAGCAGC+AGG 0.508567 1:+69988763 None:intergenic
AAGCTCATGGAAGAAAATGT+TGG 0.509498 1:-69986867 MsG0180003909.01.T01:CDS
GTGGGAGAAACCAACCAGCT+TGG 0.509556 1:-69986929 MsG0180003909.01.T01:CDS
CTTACTGATTAAGAGCCACT+TGG 0.510794 1:+69986014 None:intergenic
ACCACTTCTCCCAAGCTGGT+TGG 0.515047 1:+69986919 None:intergenic
AGCAGGAACTGTAGTAGGCA+TGG 0.515934 1:+69988780 None:intergenic
AAAGCAAGTAGCTAAGCTCA+TGG 0.516249 1:-69986880 MsG0180003909.01.T01:CDS
AGCAATGCGTCCTAGAGTGC+GGG 0.522730 1:-69988743 MsG0180003909.01.T01:CDS
TAAAATTTGTCAAAGTGATG+TGG 0.523763 1:-69985891 MsG0180003909.01.T01:three_prime_UTR
GACATGCCTTCGACAATGCT+TGG 0.526093 1:-69986715 MsG0180003909.01.T01:three_prime_UTR
TATTGCAGATGCCAGTGAGA+TGG 0.526193 1:+69986800 None:intergenic
CACCCTTTCAGCGATGCTGT+GGG 0.526622 1:+69988696 None:intergenic
ACCAACCAGCTTGGGAGAAG+TGG 0.527139 1:-69986920 MsG0180003909.01.T01:CDS
ATTATTACTTTCCGATCTTG+TGG 0.527454 1:-69985828 None:intergenic
GAGTTAAGCTGCAGCATCAT+CGG 0.527777 1:+69990042 None:intergenic
TGATGTAAGTGCTTTGATAG+TGG 0.527825 1:-69986372 MsG0180003909.01.T01:three_prime_UTR
TCCTCCAGCGCCAAGGTGAG+AGG 0.528910 1:+69990008 None:intergenic
ATCCCCACAGCATCGCTGAA+AGG 0.531960 1:-69988699 MsG0180003909.01.T01:CDS
TTAGACCACTTCTCCCAAGC+TGG 0.534418 1:+69986915 None:intergenic
CTGCATAATGCCCATCTCAC+TGG 0.536918 1:-69986811 MsG0180003909.01.T01:CDS
GATGTAAGTGCTTTGATAGT+GGG 0.537670 1:-69986371 MsG0180003909.01.T01:three_prime_UTR
CTGATGAAGCTTCCGGGAGT+GGG 0.540261 1:-69989915 MsG0180003909.01.T01:CDS
AATGGTTGCTTTAAGAATGC+TGG 0.540682 1:-69986234 MsG0180003909.01.T01:three_prime_UTR
AGGAAGAAGGAAGTGAGAGT+GGG 0.541139 1:-69986947 MsG0180003909.01.T01:CDS
AATGCAGTTTCTTCAATCAA+AGG 0.542392 1:-69986838 MsG0180003909.01.T01:CDS
TAGTGGATGAGGCGATCGAT+GGG 0.545848 1:+69986676 None:intergenic
CGAAGGCATGTCTATGGAGG+AGG 0.550678 1:+69986726 None:intergenic
TACCAGTGGAGCCACTGCAC+CGG 0.556175 1:+69987071 None:intergenic
AGTGCGGGCAAGAAGAGGAC+AGG 0.556988 1:-69988728 MsG0180003909.01.T01:CDS
AGAAGCGTCGGTTCCGTCGG+CGG 0.557440 1:+69990065 None:intergenic
ACGTGCTGTATGGATATGAA+TGG 0.559178 1:-69985939 MsG0180003909.01.T01:three_prime_UTR
ATGTAAGTGCTTTGATAGTG+GGG 0.560271 1:-69986370 MsG0180003909.01.T01:three_prime_UTR
GTAGTGGATGAGGCGATCGA+TGG 0.561557 1:+69986675 None:intergenic
GGAACAGACAAATAACTTGT+GGG 0.564736 1:+69986644 None:intergenic
CTTGTGGGTCCCAGAAGTAG+TGG 0.565521 1:+69986659 None:intergenic
TGGGAGAAGTGGTCTAATGA+TGG 0.569736 1:-69986909 MsG0180003909.01.T01:CDS
AAGCTACTATAATCAAGTAA+TGG 0.569880 1:-69986050 MsG0180003909.01.T01:three_prime_UTR
ATTGGGTGGAGCCGGTGCAG+TGG 0.571354 1:-69987082 MsG0180003909.01.T01:CDS
TGGACCAGGGTAAAGGAGGA+GGG 0.575554 1:-69989948 MsG0180003909.01.T01:CDS
AGCTTGGACCAGGGTAAAGG+AGG 0.576625 1:-69989952 MsG0180003909.01.T01:CDS
AGGAACAGACAAATAACTTG+TGG 0.578130 1:+69986643 None:intergenic
CCTAGAGTGCGGGCAAGAAG+AGG 0.581308 1:-69988733 MsG0180003909.01.T01:CDS
GCAGGAACTGTAGTAGGCAT+GGG 0.583605 1:+69988781 None:intergenic
GGTCCCAGAAGTAGTGGATG+AGG 0.584516 1:+69986665 None:intergenic
TGTTCAAGGAAATCGTCGGC+GGG 0.587670 1:+69990114 None:intergenic
TATTAGTGATGTAACTCTAG+AGG 0.590895 1:-69986283 MsG0180003909.01.T01:three_prime_UTR
GAAACCCTCCTCCAGCGCCA+AGG 0.593872 1:+69990001 None:intergenic
CAGCAATGCGTCCTAGAGTG+CGG 0.594668 1:-69988744 MsG0180003909.01.T01:CDS
ACTATACTGGAGTTGTCTGA+TGG 0.600669 1:+69986765 None:intergenic
TTGAGCATGAGTAGATTGGG+TGG 0.604660 1:-69987096 MsG0180003909.01.T01:CDS
CAGCATCATCGGAGAAGCGT+CGG 0.604818 1:+69990053 None:intergenic
AAAACCCTCCTCCTTTACCC+TGG 0.605221 1:+69989944 None:intergenic
TTACTGATTAAGAGCCACTT+GGG 0.607539 1:+69986015 None:intergenic
TTGTATCAACAAGATCCTCC+CGG 0.608383 1:+69989884 None:intergenic
GAGTTATAGTACCACAAGAT+CGG 0.608788 1:+69985817 None:intergenic
ACTAGGAACAAGTTCTTGCA+AGG 0.611183 1:+69988514 None:intergenic
AAGAATAGCTGAAAGAATCA+GGG 0.613018 1:-69988537 MsG0180003909.01.T01:CDS
TCGTCGGCGGGTGTATCGGA+AGG 0.615492 1:+69990126 None:intergenic
TTGGGTTTGAGCTTGGACCA+GGG 0.616126 1:-69989961 MsG0180003909.01.T01:CDS
TGCCATGCTGGATGAAATTG+TGG 0.617577 1:-69987743 MsG0180003909.01.T01:CDS
AGTTGTCTGATGGTTGCGAT+TGG 0.620921 1:+69986775 None:intergenic
ATCAATGACTAAAATTAAGG+AGG 0.621549 1:+69986618 None:intergenic
ATCCACAATTTCATCCAGCA+TGG 0.624370 1:+69987741 None:intergenic
ACCCTTTCAGCGATGCTGTG+GGG 0.628979 1:+69988697 None:intergenic
TGTCGAAGGCATGTCTATGG+AGG 0.632032 1:+69986723 None:intergenic
CTATTGGATGGATTGGCTCG+AGG 0.632414 1:-69985856 MsG0180003909.01.T01:three_prime_UTR
ACTCTAGGACGCATTGCTGG+TGG 0.633576 1:+69988748 None:intergenic
TTGTTCAAGGAAATCGTCGG+CGG 0.636210 1:+69990113 None:intergenic
ATGATGCTGCAGCTTAACTC+CGG 0.636220 1:-69990039 MsG0180003909.01.T01:CDS
TCAGACACAAGACACAAGAA+GGG 0.642723 1:+69990268 None:intergenic
TCATGTACCTTGTTGACACT+AGG 0.645489 1:+69988497 None:intergenic
AGTATGAATTGGGTTAGGAG+AGG 0.650259 1:+69986073 None:intergenic
GACCTTGTAAAAGGTTAGGG+TGG 0.659952 1:-69986321 MsG0180003909.01.T01:three_prime_UTR
GAGTGGGAAGCGTTTCCGGG+AGG 0.662373 1:-69989899 MsG0180003909.01.T01:CDS
AATGGGATGTCAGTTACCAG+TGG 0.664418 1:+69987057 None:intergenic
ACTTGTTCCTAGTGTCAACA+AGG 0.667852 1:-69988504 MsG0180003909.01.T01:intron
CATCCCATTATCGTCAGTCG+AGG 0.668468 1:-69987043 MsG0180003909.01.T01:intron
CAGACACAAGACACAAGAAG+GGG 0.669068 1:+69990269 None:intergenic
GATGTGCCAAGCATTGTCGA+AGG 0.672703 1:+69986709 None:intergenic
GCTCATGGAAGAAAATGTTG+GGG 0.678396 1:-69986865 MsG0180003909.01.T01:CDS
AATTTGTTCAAGGAAATCGT+CGG 0.683744 1:+69990110 None:intergenic
ATGCTTGGCACATCATCCAG+TGG 0.687924 1:-69986700 MsG0180003909.01.T01:three_prime_UTR
GGAACTTGATTGTGCCCAAG+TGG 0.700408 1:-69986029 MsG0180003909.01.T01:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAACTAATTTTGTTTAATTT+TGG - Chr1:69986332-69986351 MsG0180003909.01.T01:three_prime_UTR 10.0%
!!! TTTTATTTTTATTGCAATAT+AGG - Chr1:69987639-69987658 MsG0180003909.01.T01:intron 10.0%
!! TAAGATATTAGAAAATACAT+GGG + Chr1:69987125-69987144 None:intergenic 15.0%
!! TATAAAATTTAGTATTGTTC+AGG - Chr1:69989135-69989154 MsG0180003909.01.T01:intron 15.0%
!! TGAAGTATGATTATATATTA+TGG - Chr1:69986828-69986847 MsG0180003909.01.T01:CDS 15.0%
!! TGTTTATTCAAAAAAGTAAT+TGG - Chr1:69989961-69989980 MsG0180003909.01.T01:CDS 15.0%
!! TTAAGATATTAGAAAATACA+TGG + Chr1:69987126-69987145 None:intergenic 15.0%
!! TTGCAATAAAAATAAAATGT+AGG + Chr1:69987636-69987655 None:intergenic 15.0%
!!! AAGATATAGAGATTTTTTTT+GGG - Chr1:69988236-69988255 MsG0180003909.01.T01:intron 15.0%
!!! AATTGTATTTTAATATTCAC+CGG + Chr1:69988652-69988671 None:intergenic 15.0%
!!! ACGATAAGTTTTATTTTTAA+GGG + Chr1:69986710-69986729 None:intergenic 15.0%
!!! ACTAAATTTTATAAATTGTC+TGG + Chr1:69989128-69989147 None:intergenic 15.0%
!!! ATTTGATTTCTATCTTTATT+AGG - Chr1:69988446-69988465 MsG0180003909.01.T01:intron 15.0%
!!! TAATTTTGTTTAATTTTGGT+GGG - Chr1:69986336-69986355 MsG0180003909.01.T01:three_prime_UTR 15.0%
!!! TACGATAAGTTTTATTTTTA+AGG + Chr1:69986711-69986730 None:intergenic 15.0%
!!! TTTGTAATCATTATTTTGTT+GGG - Chr1:69988550-69988569 MsG0180003909.01.T01:CDS 15.0%
!!! TTTTCCTTTTTGTATAAAAA+AGG - Chr1:69989689-69989708 MsG0180003909.01.T01:intron 15.0%
!! AAAAAGAAAAGAAAAGACTA+TGG + Chr1:69989539-69989558 None:intergenic 20.0%
!! AATAAAATCAAATGGCTAAT+GGG + Chr1:69988621-69988640 None:intergenic 20.0%
!! ATTATATATTATGGTATGTG+TGG - Chr1:69986837-69986856 MsG0180003909.01.T01:CDS 20.0%
!! CAAATCAATGACTAAAATTA+AGG + Chr1:69989490-69989509 None:intergenic 20.0%
!! CATTGAAAATTAGACATATT+TGG + Chr1:69988772-69988791 None:intergenic 20.0%
!! CTTTATTAGGTCTATAATTA+AGG - Chr1:69988459-69988478 MsG0180003909.01.T01:intron 20.0%
!! TATGGAAAATTTCTTGTAAA+GGG - Chr1:69989636-69989655 MsG0180003909.01.T01:intron 20.0%
!! TTATATATTATGGTATGTGT+GGG - Chr1:69986838-69986857 MsG0180003909.01.T01:CDS 20.0%
!! TTATGTTAAGTTACATTCTT+AGG + Chr1:69986246-69986265 None:intergenic 20.0%
!!! AACTGATTTTGGTATTAAAT+TGG + Chr1:69988001-69988020 None:intergenic 20.0%
!!! ATTGGTATTTTATGTAATCT+TGG - Chr1:69987836-69987855 MsG0180003909.01.T01:intron 20.0%
!!! CAAGATATAGAGATTTTTTT+TGG - Chr1:69988235-69988254 MsG0180003909.01.T01:intron 20.0%
!!! CTAATTTTGTTTAATTTTGG+TGG - Chr1:69986335-69986354 MsG0180003909.01.T01:three_prime_UTR 20.0%
!!! CTTTGTAATCATTATTTTGT+TGG - Chr1:69988549-69988568 MsG0180003909.01.T01:CDS 20.0%
!!! CTTTTCTTTTCTTTTTTTTG+CGG - Chr1:69989543-69989562 MsG0180003909.01.T01:intron 20.0%
!!! TTGTTTATTACAATTAGTCT+GGG - Chr1:69988103-69988122 MsG0180003909.01.T01:intron 20.0%
!!! TTTTCTGCTATATTTACATT+AGG + Chr1:69986924-69986943 None:intergenic 20.0%
!!! TTTTCTTTTCTTTTCAGTTA+TGG - Chr1:69985945-69985964 MsG0180003909.01.T01:three_prime_UTR 20.0%
!!! TTTTGTTGAAAACTAGATAT+TGG + Chr1:69988809-69988828 None:intergenic 20.0%
! AAGCTACTATAATCAAGTAA+TGG - Chr1:69990052-69990071 MsG0180003909.01.T01:CDS 25.0%
! AATAATATCCAATTATCCGA+AGG - Chr1:69988717-69988736 MsG0180003909.01.T01:CDS 25.0%
! AATTAAATCATCCTTCAAGT+GGG + Chr1:69987933-69987952 None:intergenic 25.0%
! AATTATTCAAATCATGTCGT+TGG - Chr1:69989083-69989102 MsG0180003909.01.T01:intron 25.0%
! ATAGTAGCTTAGTATGAATT+GGG + Chr1:69990042-69990061 None:intergenic 25.0%
! ATAGTGTATTACTATTTACC+TGG - Chr1:69986404-69986423 MsG0180003909.01.T01:three_prime_UTR 25.0%
! ATCAATGACTAAAATTAAGG+AGG + Chr1:69989487-69989506 None:intergenic 25.0%
! CGAATGATTAACATTTAATG+AGG - Chr1:69987453-69987472 MsG0180003909.01.T01:intron 25.0%
! CTATGGAAAATTTCTTGTAA+AGG - Chr1:69989635-69989654 MsG0180003909.01.T01:intron 25.0%
! CTTGTTTATTACAATTAGTC+TGG - Chr1:69988102-69988121 MsG0180003909.01.T01:intron 25.0%
! GAAAACATTTCAGACTTTAA+TGG - Chr1:69986540-69986559 MsG0180003909.01.T01:three_prime_UTR 25.0%
! GAATAAAATCAAATGGCTAA+TGG + Chr1:69988622-69988641 None:intergenic 25.0%
! GTTGCTGACAAATTTAAATT+TGG + Chr1:69988928-69988947 None:intergenic 25.0%
! TAAAATTTGTCAAAGTGATG+TGG - Chr1:69990211-69990230 MsG0180003909.01.T01:five_prime_UTR 25.0%
! TAAGACAAAAAAATGCTACT+TGG + Chr1:69987264-69987283 None:intergenic 25.0%
! TACTTCATTCATCTTTAAGT+TGG + Chr1:69986815-69986834 None:intergenic 25.0%
! TAGTGTATTACTATTTACCT+GGG - Chr1:69986405-69986424 MsG0180003909.01.T01:three_prime_UTR 25.0%
! TATAGTAGCTTAGTATGAAT+TGG + Chr1:69990043-69990062 None:intergenic 25.0%
! TCATCGTGAATAAAATCAAA+TGG + Chr1:69988629-69988648 None:intergenic 25.0%
! TCGGATAATTGGATATTATT+GGG + Chr1:69988717-69988736 None:intergenic 25.0%
! TGGATTATGTCAAATTCTTA+AGG - Chr1:69988379-69988398 MsG0180003909.01.T01:intron 25.0%
! TGTTGAAATGCAATAGATAA+TGG - Chr1:69989850-69989869 MsG0180003909.01.T01:intron 25.0%
! TTCGGATAATTGGATATTAT+TGG + Chr1:69988718-69988737 None:intergenic 25.0%
!! AATTGGACCTCTTTTTATAA+TGG - Chr1:69989978-69989997 MsG0180003909.01.T01:CDS 25.0%
!! ATTGGACCTCTTTTTATAAT+GGG - Chr1:69989979-69989998 MsG0180003909.01.T01:CDS 25.0%
!! CCTTTTTGTATAAAAAAGGA+TGG - Chr1:69989693-69989712 MsG0180003909.01.T01:intron 25.0%
!! GCTAATGTTTCTTTTACTTT+TGG - Chr1:69987512-69987531 MsG0180003909.01.T01:intron 25.0%
!! TCATCTTTTAACCTTTTGAT+AGG + Chr1:69988136-69988155 None:intergenic 25.0%
!! TTTTGTATAAAAAAGGATGG+AGG - Chr1:69989696-69989715 MsG0180003909.01.T01:intron 25.0%
!!! AAATATAGCAGAAAAGTACT+TGG - Chr1:69986929-69986948 MsG0180003909.01.T01:CDS 25.0%
!!! ACACAATCTAAAACTGATTT+TGG + Chr1:69988012-69988031 None:intergenic 25.0%
!!! ATACACAGTTTTAGAAACAA+TGG + Chr1:69988313-69988332 None:intergenic 25.0%
!!! CCATCCTTTTTTATACAAAA+AGG + Chr1:69989696-69989715 None:intergenic 25.0%
!!! GAATTGTTATTGGTTTTTGT+GGG - Chr1:69986735-69986754 MsG0180003909.01.T01:exon 25.0%
!!! TGAATTGTTATTGGTTTTTG+TGG - Chr1:69986734-69986753 MsG0180003909.01.T01:exon 25.0%
!!! TGATGCTTTTTGTTTATTTG+AGG - Chr1:69989915-69989934 MsG0180003909.01.T01:CDS 25.0%
AAACTAGCAGTAAGTAAGAA+TGG - Chr1:69986570-69986589 MsG0180003909.01.T01:three_prime_UTR 30.0%
AAAGAATAGCTGAAAGAATC+AGG - Chr1:69987564-69987583 MsG0180003909.01.T01:intron 30.0%
AAATCACATTGCTAATTCCT+TGG - Chr1:69987479-69987498 MsG0180003909.01.T01:intron 30.0%
AAATTTCATGTTCGCCTAAT+CGG + Chr1:69988181-69988200 None:intergenic 30.0%
AAGAATAGCTGAAAGAATCA+GGG - Chr1:69987565-69987584 MsG0180003909.01.T01:intron 30.0%
AAGGCAGAAAGGTAAATATA+TGG + Chr1:69987214-69987233 None:intergenic 30.0%
AATGCAGTTTCTTCAATCAA+AGG - Chr1:69989264-69989283 MsG0180003909.01.T01:intron 30.0%
AATTACGCATTGAACAATAC+TGG + Chr1:69987862-69987881 None:intergenic 30.0%
AGTATTGTTCAATGCGTAAT+TGG - Chr1:69987861-69987880 MsG0180003909.01.T01:intron 30.0%
ATATTTACCTTTCTGCCTTT+GGG - Chr1:69987215-69987234 MsG0180003909.01.T01:intron 30.0%
ATCATCTGTTTAAGCTGAAT+TGG - Chr1:69986363-69986382 MsG0180003909.01.T01:three_prime_UTR 30.0%
ATCGTAGCATGAATTGTTAT+TGG - Chr1:69986725-69986744 MsG0180003909.01.T01:exon 30.0%
ATGGAAATAGTATACAGAAG+AGG + Chr1:69988294-69988313 None:intergenic 30.0%
ATTATTACTTTCCGATCTTG+TGG - Chr1:69990274-69990293 MsG0180003909.01.T01:five_prime_UTR 30.0%
CATAAAGTTGCATTCAAAGT+AGG - Chr1:69989510-69989529 MsG0180003909.01.T01:intron 30.0%
GAAAACATTTCAGACTTTGA+TGG + Chr1:69987022-69987041 None:intergenic 30.0%
GAAATCAAATGTGAAATCCA+TGG + Chr1:69988436-69988455 None:intergenic 30.0%
GAACTAGCAATAAGTAAGAA+TGG + Chr1:69986992-69987011 None:intergenic 30.0%
GAATTAAATCATCCTTCAAG+TGG + Chr1:69987934-69987953 None:intergenic 30.0%
GATAATTGGATATTATTGGG+TGG + Chr1:69988714-69988733 None:intergenic 30.0%
GATTTCCTTGAACAAATTCT+CGG - Chr1:69985997-69986016 MsG0180003909.01.T01:three_prime_UTR 30.0%
TAAAGATCATACACCAAGTT+AGG + Chr1:69986779-69986798 None:intergenic 30.0%
TAAGATACGGAGACAAAATT+TGG - Chr1:69987724-69987743 MsG0180003909.01.T01:CDS 30.0%
TAATGATTACAAAGAGTGAG+AGG + Chr1:69988543-69988562 None:intergenic 30.0%
TATATTTACCTTTCTGCCTT+TGG - Chr1:69987214-69987233 MsG0180003909.01.T01:intron 30.0%
TCTATAGAACTTGTGCAATT+AGG - Chr1:69987677-69987696 MsG0180003909.01.T01:intron 30.0%
TGACTAAAATTAAGGAGGTT+AGG + Chr1:69989482-69989501 None:intergenic 30.0%
TTTAGTATTGTTCAGGAAGA+AGG - Chr1:69989142-69989161 MsG0180003909.01.T01:intron 30.0%
! AAATTTTCCATAGACAGGAT+AGG + Chr1:69989628-69989647 None:intergenic 30.0%
! AACAAAAACAGTGCTGAAAA+TGG - Chr1:69987771-69987790 MsG0180003909.01.T01:intron 30.0%
! AAGTTTTTGCAGACTTTTCA+TGG - Chr1:69987294-69987313 MsG0180003909.01.T01:intron 30.0%
! AATAATTATGCCAGCTTTGT+TGG - Chr1:69986486-69986505 MsG0180003909.01.T01:three_prime_UTR 30.0%
! AATTTGTTCAAGGAAATCGT+CGG + Chr1:69985995-69986014 None:intergenic 30.0%
! AATTTTCCATAGACAGGATA+GGG + Chr1:69989627-69989646 None:intergenic 30.0%
! ACAAGAAATTTTCCATAGAC+AGG + Chr1:69989633-69989652 None:intergenic 30.0%
! AGTTTTTGCAGACTTTTCAT+GGG - Chr1:69987295-69987314 MsG0180003909.01.T01:intron 30.0%
! CAATCTATAGTTCTACATAG+TGG - Chr1:69987895-69987914 MsG0180003909.01.T01:intron 30.0%
! TATCAGCTTTTGTCAATACA+GGG - Chr1:69989569-69989588 MsG0180003909.01.T01:intron 30.0%
! TGTTCTTTTGTCTATCTTTC+AGG - Chr1:69988981-69989000 MsG0180003909.01.T01:intron 30.0%
! TTGATTTTATTCACGATGAC+CGG - Chr1:69988630-69988649 MsG0180003909.01.T01:intron 30.0%
! TTGTGTTTGAGTTTGGAAAA+TGG - Chr1:69987961-69987980 MsG0180003909.01.T01:intron 30.0%
!! AAAGCATCATCATTTTCTTC+TGG + Chr1:69989904-69989923 None:intergenic 30.0%
!! TTATTTTGTTGGGATTCAAC+TGG - Chr1:69988560-69988579 MsG0180003909.01.T01:intron 30.0%
!!! GGGTTTTTAGTTTTTGTAGT+GGG - Chr1:69989752-69989771 MsG0180003909.01.T01:intron 30.0%
!!! TTTCAGCACTGTTTTTGTTT+CGG + Chr1:69987770-69987789 None:intergenic 30.0%
!!! TTTTTTTTGGGACTTAGTTG+TGG - Chr1:69988248-69988267 MsG0180003909.01.T01:intron 30.0%
AAATAACTCGTTACTTCACC+AGG + Chr1:69986649-69986668 None:intergenic 35.0%
AAGCTCATGGAAGAAAATGT+TGG - Chr1:69989235-69989254 MsG0180003909.01.T01:intron 35.0%
AGAACTTGTGCAATTAGGTA+AGG - Chr1:69987682-69987701 MsG0180003909.01.T01:intron 35.0%
AGCTCATGGAAGAAAATGTT+GGG - Chr1:69989236-69989255 MsG0180003909.01.T01:intron 35.0%
AGCTTAGTATGAATTGGGTT+AGG + Chr1:69990037-69990056 None:intergenic 35.0%
AGGAACAGACAAATAACTTG+TGG + Chr1:69989462-69989481 None:intergenic 35.0%
AGTTTCAGGCTTAACTATAC+TGG + Chr1:69989353-69989372 None:intergenic 35.0%
ATTCTTAAGGCTTCAAGTGA+AGG - Chr1:69988392-69988411 MsG0180003909.01.T01:intron 35.0%
CATTAGCATTAAGCATACCA+AGG + Chr1:69987499-69987518 None:intergenic 35.0%
CTCAAACCCAAATGATAAAC+CGG + Chr1:69986132-69986151 None:intergenic 35.0%
GGTGAAGTAACGAGTTATTT+GGG - Chr1:69986649-69986668 MsG0180003909.01.T01:three_prime_UTR 35.0%
TAAAAAAGGATGGAGGTTAG+TGG - Chr1:69989703-69989722 MsG0180003909.01.T01:intron 35.0%
TACTGTTGGCAATGTCTAAA+CGG + Chr1:69987087-69987106 None:intergenic 35.0%
TATTATGGTATGTGTGGGAT+TGG - Chr1:69986843-69986862 MsG0180003909.01.T01:CDS 35.0%
TCACTTGAGAGTTAAGAATC+AGG + Chr1:69990120-69990139 None:intergenic 35.0%
TCTCCTCCCATTATAAAAAG+AGG + Chr1:69989988-69990007 None:intergenic 35.0%
TGATGTAAGTGCTTTGATAG+TGG - Chr1:69989730-69989749 MsG0180003909.01.T01:intron 35.0%
TGATTTCTCTAGACACATGT+GGG - Chr1:69988845-69988864 MsG0180003909.01.T01:intron 35.0%
TGGGAAACAATCCTATCAAA+AGG - Chr1:69988122-69988141 MsG0180003909.01.T01:intron 35.0%
TGGTGAAGTAACGAGTTATT+TGG - Chr1:69986648-69986667 MsG0180003909.01.T01:three_prime_UTR 35.0%
TGTACATGAAAGTGAAAGCA+AGG - Chr1:69988889-69988908 MsG0180003909.01.T01:intron 35.0%
TGTTTAAGCTGAATTGGACT+TGG - Chr1:69986369-69986388 MsG0180003909.01.T01:three_prime_UTR 35.0%
! CTTGTTTGTTGACTATTGGA+TGG - Chr1:69990234-69990253 MsG0180003909.01.T01:five_prime_UTR 35.0%
! GATGTAAGTGCTTTGATAGT+GGG - Chr1:69989731-69989750 MsG0180003909.01.T01:intron 35.0%
! GGAACAGACAAATAACTTGT+GGG + Chr1:69989461-69989480 None:intergenic 35.0%
! GTATCAGCTTTTGTCAATAC+AGG - Chr1:69989568-69989587 MsG0180003909.01.T01:intron 35.0%
! TAACTCGTTGTGTTTGAGTT+TGG - Chr1:69987954-69987973 MsG0180003909.01.T01:intron 35.0%
! TCTGAAGTATGAAAGTCTTC+TGG - Chr1:69988208-69988227 MsG0180003909.01.T01:intron 35.0%
! TCTGAGTGACTAGTTGAAAA+TGG + Chr1:69985869-69985888 None:intergenic 35.0%
! TTACTGATTAAGAGCCACTT+GGG + Chr1:69990090-69990109 None:intergenic 35.0%
! TTATCATTTGGGTTTGAGCT+TGG - Chr1:69986134-69986153 MsG0180003909.01.T01:three_prime_UTR 35.0%
! TTGTTGACTATTGGATGGAT+TGG - Chr1:69990239-69990258 MsG0180003909.01.T01:five_prime_UTR 35.0%
! TTTTTGTGGGTGGTTCATTT+TGG - Chr1:69986748-69986767 MsG0180003909.01.T01:CDS 35.0%
!! AATGGTTGCTTTAAGAATGC+TGG - Chr1:69989868-69989887 MsG0180003909.01.T01:intron 35.0%
!! ATGTAAGTGCTTTGATAGTG+GGG - Chr1:69989732-69989751 MsG0180003909.01.T01:intron 35.0%
!! GTCAAAAGGCATTGGTAAAT+AGG + Chr1:69988521-69988540 None:intergenic 35.0%
!! GTTTTGAGCATGAGTAGATT+GGG - Chr1:69989003-69989022 MsG0180003909.01.T01:intron 35.0%
!! TAATTAAGGCTAGCTTGAAC+TGG - Chr1:69988473-69988492 MsG0180003909.01.T01:intron 35.0%
!! TAGTTTTTGTAGTGGGATGT+GGG - Chr1:69989759-69989778 MsG0180003909.01.T01:intron 35.0%
!! TTAGTTTTTGTAGTGGGATG+TGG - Chr1:69989758-69989777 MsG0180003909.01.T01:intron 35.0%
!! TTTTATAATGGGAGGAGAGA+TGG - Chr1:69989990-69990009 MsG0180003909.01.T01:CDS 35.0%
!!! GGGGTTTTTAGTTTTTGTAG+TGG - Chr1:69989751-69989770 MsG0180003909.01.T01:intron 35.0%
!!! TTCAGCACTGTTTTTGTTTC+GGG + Chr1:69987769-69987788 None:intergenic 35.0%
!!! TTGTTATTGGTTTTTGTGGG+TGG - Chr1:69986738-69986757 MsG0180003909.01.T01:CDS 35.0%
AAAGCAAGTAGCTAAGCTCA+TGG - Chr1:69989222-69989241 MsG0180003909.01.T01:intron 40.0%
AAGCTACTACCAACTGAGAA+TGG - Chr1:69987061-69987080 MsG0180003909.01.T01:CDS 40.0%
AATACCAATGCCTAGCAACA+AGG + Chr1:69987825-69987844 None:intergenic 40.0%
ACAAAGAGTGAGAGGTCAAA+AGG + Chr1:69988535-69988554 None:intergenic 40.0%
ACGTGCTGTATGGATATGAA+TGG - Chr1:69990163-69990182 MsG0180003909.01.T01:five_prime_UTR 40.0%
ACTAGGAACAAGTTCTTGCA+AGG + Chr1:69987591-69987610 None:intergenic 40.0%
ACTATACTGGAGTTGTCTGA+TGG + Chr1:69989340-69989359 None:intergenic 40.0%
ACTTGTTCCTAGTGTCAACA+AGG - Chr1:69987598-69987617 MsG0180003909.01.T01:intron 40.0%
AGGGTCATGTTATGACAAGT+TGG + Chr1:69986691-69986710 None:intergenic 40.0%
ATCCACAATTTCATCCAGCA+TGG + Chr1:69988364-69988383 None:intergenic 40.0%
ATTACCTCGACTGACGATAA+TGG + Chr1:69989066-69989085 None:intergenic 40.0%
CATGTGTCTAGAGAAATCAC+TGG + Chr1:69988844-69988863 None:intergenic 40.0%
CTCCGAAGTGAGATAAGATA+CGG - Chr1:69987711-69987730 MsG0180003909.01.T01:CDS 40.0%
CTCCGTATCTTATCTCACTT+CGG + Chr1:69987716-69987735 None:intergenic 40.0%
CTTGTGCAATTAGGTAAGGA+TGG - Chr1:69987686-69987705 MsG0180003909.01.T01:intron 40.0%
GCTCATGGAAGAAAATGTTG+GGG - Chr1:69989237-69989256 MsG0180003909.01.T01:intron 40.0%
GTCTCATGTTTGATTCTCCT+CGG - Chr1:69986427-69986446 MsG0180003909.01.T01:three_prime_UTR 40.0%
GTGATTTCTCTAGACACATG+TGG - Chr1:69988844-69988863 MsG0180003909.01.T01:intron 40.0%
GTTGAAGACCTTCGGATAAT+TGG + Chr1:69988728-69988747 None:intergenic 40.0%
TAAGCTACTACCAACAAAGC+TGG + Chr1:69986499-69986518 None:intergenic 40.0%
TAGACATTGCCAACAGTACT+TGG - Chr1:69987089-69987108 MsG0180003909.01.T01:CDS 40.0%
TATGGAGGAGGAATAGTTTC+AGG + Chr1:69989367-69989386 None:intergenic 40.0%
TCAGACACAAGACACAAGAA+GGG + Chr1:69985837-69985856 None:intergenic 40.0%
TCATGTACCTTGTTGACACT+AGG + Chr1:69987608-69987627 None:intergenic 40.0%
TCTGCATATAGTCTCCGATT+AGG - Chr1:69988164-69988183 MsG0180003909.01.T01:intron 40.0%
TCTGCGCAACTGTTATTGAA+CGG + Chr1:69987543-69987562 None:intergenic 40.0%
TGGGACCTTGTAAAAGGTTA+GGG - Chr1:69989778-69989797 MsG0180003909.01.T01:intron 40.0%
TTACCTCGACTGACGATAAT+GGG + Chr1:69989065-69989084 None:intergenic 40.0%
TTCAGACACAAGACACAAGA+AGG + Chr1:69985838-69985857 None:intergenic 40.0%
TTGTATCAACAAGATCCTCC+CGG + Chr1:69986221-69986240 None:intergenic 40.0%
! AAAACGACTCCAAGTACTGT+TGG + Chr1:69987101-69987120 None:intergenic 40.0%
! AGTATGAATTGGGTTAGGAG+AGG + Chr1:69990032-69990051 None:intergenic 40.0%
! CTCAACTTTTACGTGCTGTA+TGG - Chr1:69990153-69990172 MsG0180003909.01.T01:exon 40.0%
! CTCGCATGTTTTCTGTTTGA+CGG - Chr1:69988069-69988088 MsG0180003909.01.T01:intron 40.0%
! CTTACTGATTAAGAGCCACT+TGG + Chr1:69990091-69990110 None:intergenic 40.0%
! GAAGACCGAGAATTTGTTCA+AGG + Chr1:69986005-69986024 None:intergenic 40.0%
! TACCACCCTAACCTTTTACA+AGG + Chr1:69989786-69989805 None:intergenic 40.0%
! TGCTGAAAATGGAGCTTTGT+GGG - Chr1:69987782-69987801 MsG0180003909.01.T01:intron 40.0%
! TTTTCCTTGTTGCTAGGCAT+TGG - Chr1:69987818-69987837 MsG0180003909.01.T01:intron 40.0%
!! AGCTGAATTGGACTTGGTTT+TGG - Chr1:69986375-69986394 MsG0180003909.01.T01:three_prime_UTR 40.0%
!! CATGCACCGGTTTATCATTT+GGG - Chr1:69986123-69986142 MsG0180003909.01.T01:three_prime_UTR 40.0%
!! GACTGATTTTCCTTGTTGCT+AGG - Chr1:69987812-69987831 MsG0180003909.01.T01:intron 40.0%
!! GGACCTCTTTTTATAATGGG+AGG - Chr1:69989982-69990001 MsG0180003909.01.T01:CDS 40.0%
!! GTGGCTTGTTTGTTGACTAT+TGG - Chr1:69990230-69990249 MsG0180003909.01.T01:five_prime_UTR 40.0%
!! TCATGCACCGGTTTATCATT+TGG - Chr1:69986122-69986141 MsG0180003909.01.T01:three_prime_UTR 40.0%
!!! AGGGTCTGCTTGCATTTTTT+AGG + Chr1:69989608-69989627 None:intergenic 40.0%
!!! GGTTTTGAGCATGAGTAGAT+TGG - Chr1:69989002-69989021 MsG0180003909.01.T01:intron 40.0%
AATGGGATGTCAGTTACCAG+TGG + Chr1:69989048-69989067 None:intergenic 45.0%
ACATGCGAGGTATGCTTATC+TGG + Chr1:69988058-69988077 None:intergenic 45.0%
AGGAAGAAGGAAGTGAGAGT+GGG - Chr1:69989155-69989174 MsG0180003909.01.T01:intron 45.0%
AGTCCACAGTTGAAGACCTT+CGG + Chr1:69988736-69988755 None:intergenic 45.0%
AGTTGTCTGATGGTTGCGAT+TGG + Chr1:69989330-69989349 None:intergenic 45.0%
ATGATGCTGCAGCTTAACTC+CGG - Chr1:69986063-69986082 MsG0180003909.01.T01:three_prime_UTR 45.0%
ATTGCAGATGCCAGTGAGAT+GGG + Chr1:69989304-69989323 None:intergenic 45.0%
CAGACACAAGACACAAGAAG+GGG + Chr1:69985836-69985855 None:intergenic 45.0%
CATGTCTGTTTCCCACTTGA+AGG - Chr1:69987919-69987938 MsG0180003909.01.T01:intron 45.0%
CATTCTTCAATTCAGCTGCC+TGG - Chr1:69986628-69986647 MsG0180003909.01.T01:three_prime_UTR 45.0%
CGTCAAACAGAAAACATGCG+AGG + Chr1:69988071-69988090 None:intergenic 45.0%
CTAAATTCGCCCACCCAAAT+TGG + Chr1:69986455-69986474 None:intergenic 45.0%
GACCTTGTAAAAGGTTAGGG+TGG - Chr1:69989781-69989800 MsG0180003909.01.T01:intron 45.0%
GAGAATCAAACATGAGACCC+AGG + Chr1:69986425-69986444 None:intergenic 45.0%
GAGTTAAGCTGCAGCATCAT+CGG + Chr1:69986063-69986082 None:intergenic 45.0%
GTGAAAGCAAGGCTCTTCAT+TGG - Chr1:69988900-69988919 MsG0180003909.01.T01:intron 45.0%
GTGCTGAAAATGGAGCTTTG+TGG - Chr1:69987781-69987800 MsG0180003909.01.T01:intron 45.0%
GTGGGACCTTGTAAAAGGTT+AGG - Chr1:69989777-69989796 MsG0180003909.01.T01:intron 45.0%
GTGGTCTGCTGTATTTCTCT+TGG - Chr1:69988267-69988286 MsG0180003909.01.T01:intron 45.0%
TATCCGAAGGTCTTCAACTG+TGG - Chr1:69988730-69988749 MsG0180003909.01.T01:CDS 45.0%
TATTGCAGATGCCAGTGAGA+TGG + Chr1:69989305-69989324 None:intergenic 45.0%
TCTAAACGGCCATTCTCAGT+TGG + Chr1:69987073-69987092 None:intergenic 45.0%
TGCCATGCTGGATGAAATTG+TGG - Chr1:69988359-69988378 MsG0180003909.01.T01:intron 45.0%
TGGGAGAAGTGGTCTAATGA+TGG - Chr1:69989193-69989212 MsG0180003909.01.T01:intron 45.0%
TTGAAGCCTGATGAAGCTTC+CGG - Chr1:69986180-69986199 MsG0180003909.01.T01:three_prime_UTR 45.0%
TTGAGCATGAGTAGATTGGG+TGG - Chr1:69989006-69989025 MsG0180003909.01.T01:intron 45.0%
TTGTTCAAGGAAATCGTCGG+CGG + Chr1:69985992-69986011 None:intergenic 45.0%
TTTACCTTTCTGCCTTTGGG+AGG - Chr1:69987218-69987237 MsG0180003909.01.T01:intron 45.0%
! AGTGAGAGGTCAAAAGGCAT+TGG + Chr1:69988529-69988548 None:intergenic 45.0%
! ATTTGAGGTGTGTGTGTGTG+TGG - Chr1:69989930-69989949 MsG0180003909.01.T01:CDS 45.0%
! CATTGTCGAAGGCATGTCTA+TGG + Chr1:69989385-69989404 None:intergenic 45.0%
! GCTGAAAATGGAGCTTTGTG+GGG - Chr1:69987783-69987802 MsG0180003909.01.T01:intron 45.0%
! TAATGGGTCCCATACCAAAG+TGG + Chr1:69988605-69988624 None:intergenic 45.0%
! TAGCACTTTTGTGAGCTCCA+TGG - Chr1:69988416-69988435 MsG0180003909.01.T01:intron 45.0%
! TTTGAGGTGTGTGTGTGTGT+GGG - Chr1:69989931-69989950 MsG0180003909.01.T01:CDS 45.0%
!! ATTCTCCTCGGTGCCAATTT+GGG - Chr1:69986439-69986458 MsG0180003909.01.T01:three_prime_UTR 45.0%
!! CTGAGATGCCACTTTGGTAT+GGG - Chr1:69988594-69988613 MsG0180003909.01.T01:intron 45.0%
!!! CATTTTGGTAGCGCCTAACT+TGG - Chr1:69986763-69986782 MsG0180003909.01.T01:CDS 45.0%
AAAACCCTCCTCCTTTACCC+TGG + Chr1:69986161-69986180 None:intergenic 50.0%
AGCAGACCCTATCCTGTCTA+TGG - Chr1:69989618-69989637 MsG0180003909.01.T01:intron 50.0%
AGCAGGAACTGTAGTAGGCA+TGG + Chr1:69987325-69987344 None:intergenic 50.0%
ATCGCCTCATCCACTACTTC+TGG - Chr1:69989433-69989452 MsG0180003909.01.T01:intron 50.0%
ATGAGTAGATTGGGTGGAGC+CGG - Chr1:69989012-69989031 MsG0180003909.01.T01:intron 50.0%
ATGCTTGGCACATCATCCAG+TGG - Chr1:69989402-69989421 MsG0180003909.01.T01:intron 50.0%
CAGGAAGAAGGAAGTGAGAG+TGG - Chr1:69989154-69989173 MsG0180003909.01.T01:intron 50.0%
CATCCCATTATCGTCAGTCG+AGG - Chr1:69989059-69989078 MsG0180003909.01.T01:intron 50.0%
CCATACCAAAGTGGCATCTC+AGG + Chr1:69988596-69988615 None:intergenic 50.0%
CTGCATAATGCCCATCTCAC+TGG - Chr1:69989291-69989310 MsG0180003909.01.T01:intron 50.0%
GACATGCCTTCGACAATGCT+TGG - Chr1:69989387-69989406 MsG0180003909.01.T01:intron 50.0%
GCAGGAACTGTAGTAGGCAT+GGG + Chr1:69987324-69987343 None:intergenic 50.0%
GGAACTTGATTGTGCCCAAG+TGG - Chr1:69990073-69990092 MsG0180003909.01.T01:CDS 50.0%
GGGATGTGGGACCTTGTAAA+AGG - Chr1:69989772-69989791 MsG0180003909.01.T01:intron 50.0%
TCGCCTCATCCACTACTTCT+GGG - Chr1:69989434-69989453 MsG0180003909.01.T01:intron 50.0%
TGAAGCCTGATGAAGCTTCC+GGG - Chr1:69986181-69986200 MsG0180003909.01.T01:three_prime_UTR 50.0%
TGCGAGGTATGCTTATCTGG+AGG + Chr1:69988055-69988074 None:intergenic 50.0%
TGGGAGAAACCAACCAGCTT+GGG - Chr1:69989174-69989193 MsG0180003909.01.T01:intron 50.0%
TGTTCAAGGAAATCGTCGGC+GGG + Chr1:69985991-69986010 None:intergenic 50.0%
TTAGACCACTTCTCCCAAGC+TGG + Chr1:69989190-69989209 None:intergenic 50.0%
TTGAGCTTGGACCAGGGTAA+AGG - Chr1:69986147-69986166 MsG0180003909.01.T01:three_prime_UTR 50.0%
TTGGCCAACAACACTTCTCC+AGG + Chr1:69987245-69987264 None:intergenic 50.0%
TTGGGTTTGAGCTTGGACCA+GGG - Chr1:69986141-69986160 MsG0180003909.01.T01:three_prime_UTR 50.0%
! ATGGTATGTGTGGGATTGGC+TGG - Chr1:69986847-69986866 MsG0180003909.01.T01:CDS 50.0%
! GATGTGCCAAGCATTGTCGA+AGG + Chr1:69989396-69989415 None:intergenic 50.0%
! TAGTGGATGAGGCGATCGAT+GGG + Chr1:69989429-69989448 None:intergenic 50.0%
! TGTCGAAGGCATGTCTATGG+AGG + Chr1:69989382-69989401 None:intergenic 50.0%
! TTTGGGTTTGAGCTTGGACC+AGG - Chr1:69986140-69986159 MsG0180003909.01.T01:three_prime_UTR 50.0%
!! AGGTCCTGGAGAAGTGTTGT+TGG - Chr1:69987238-69987257 MsG0180003909.01.T01:intron 50.0%
!! CCTGAGATGCCACTTTGGTA+TGG - Chr1:69988593-69988612 MsG0180003909.01.T01:intron 50.0%
!! CTATTGGATGGATTGGCTCG+AGG - Chr1:69990246-69990265 MsG0180003909.01.T01:five_prime_UTR 50.0%
!! GATTCTCCTCGGTGCCAATT+TGG - Chr1:69986438-69986457 MsG0180003909.01.T01:three_prime_UTR 50.0%
ACCAACCAGCTTGGGAGAAG+TGG - Chr1:69989182-69989201 MsG0180003909.01.T01:intron 55.0%
ACCACTTCTCCCAAGCTGGT+TGG + Chr1:69989186-69989205 None:intergenic 55.0%
ACCCTTTCAGCGATGCTGTG+GGG + Chr1:69987408-69987427 None:intergenic 55.0%
ACTTCTCCAGGACCTCCCAA+AGG + Chr1:69987233-69987252 None:intergenic 55.0%
AGCAATGCGTCCTAGAGTGC+GGG - Chr1:69987359-69987378 MsG0180003909.01.T01:intron 55.0%
AGCTTGGACCAGGGTAAAGG+AGG - Chr1:69986150-69986169 MsG0180003909.01.T01:three_prime_UTR 55.0%
AGGACCTCCCAAAGGCAGAA+AGG + Chr1:69987225-69987244 None:intergenic 55.0%
ATCCCCACAGCATCGCTGAA+AGG - Chr1:69987403-69987422 MsG0180003909.01.T01:intron 55.0%
CACCCTTTCAGCGATGCTGT+GGG + Chr1:69987409-69987428 None:intergenic 55.0%
CAGCAATGCGTCCTAGAGTG+CGG - Chr1:69987358-69987377 MsG0180003909.01.T01:intron 55.0%
CTGATGAAGCTTCCGGGAGT+GGG - Chr1:69986187-69986206 MsG0180003909.01.T01:three_prime_UTR 55.0%
CTTGTGGGTCCCAGAAGTAG+TGG + Chr1:69989446-69989465 None:intergenic 55.0%
GAAATCGTCGGCGGGTGTAT+CGG + Chr1:69985983-69986002 None:intergenic 55.0%
GGAGCAGCAGGAACTGTAGT+AGG + Chr1:69987330-69987349 None:intergenic 55.0%
GTGGGAGAAACCAACCAGCT+TGG - Chr1:69989173-69989192 MsG0180003909.01.T01:intron 55.0%
TCACCCTTTCAGCGATGCTG+TGG + Chr1:69987410-69987429 None:intergenic 55.0%
TCCCCACAGCATCGCTGAAA+GGG - Chr1:69987404-69987423 MsG0180003909.01.T01:intron 55.0%
TGGACCAGGGTAAAGGAGGA+GGG - Chr1:69986154-69986173 MsG0180003909.01.T01:three_prime_UTR 55.0%
TGGAGGAGGGTTTCATGCAC+CGG - Chr1:69986110-69986129 MsG0180003909.01.T01:three_prime_UTR 55.0%
TTGGACCAGGGTAAAGGAGG+AGG - Chr1:69986153-69986172 MsG0180003909.01.T01:three_prime_UTR 55.0%
! CAGCATCATCGGAGAAGCGT+CGG + Chr1:69986052-69986071 None:intergenic 55.0%
! CGAAGGCATGTCTATGGAGG+AGG + Chr1:69989379-69989398 None:intergenic 55.0%
! TTTCTGCCTTTGGGAGGTCC+TGG - Chr1:69987224-69987243 MsG0180003909.01.T01:intron 55.0%
!! ACTCTAGGACGCATTGCTGG+TGG + Chr1:69987357-69987376 None:intergenic 55.0%
!! GGTCCCAGAAGTAGTGGATG+AGG + Chr1:69989440-69989459 None:intergenic 55.0%
!! GTAGTGGATGAGGCGATCGA+TGG + Chr1:69989430-69989449 None:intergenic 55.0%
!! TCCTCGGTGCCAATTTGGGT+GGG - Chr1:69986443-69986462 MsG0180003909.01.T01:three_prime_UTR 55.0%
AGTGCGGGCAAGAAGAGGAC+AGG - Chr1:69987374-69987393 MsG0180003909.01.T01:intron 60.0%
CCACTCCCGGAAGCTTCATC+AGG + Chr1:69986189-69986208 None:intergenic 60.0%
CCGAATTTCACCTCCGCCGA+CGG - Chr1:69986024-69986043 MsG0180003909.01.T01:three_prime_UTR 60.0%
CCGTCGGCGGAGGTGAAATT+CGG + Chr1:69986027-69986046 None:intergenic 60.0%
CCTAGAGTGCGGGCAAGAAG+AGG - Chr1:69987369-69987388 MsG0180003909.01.T01:intron 60.0%
CCTCTTCTTGCCCGCACTCT+AGG + Chr1:69987372-69987391 None:intergenic 60.0%
CCTGATGAAGCTTCCGGGAG+TGG - Chr1:69986186-69986205 MsG0180003909.01.T01:three_prime_UTR 60.0%
GACTGATCGAGCTGCCATGC+TGG - Chr1:69988347-69988366 MsG0180003909.01.T01:intron 60.0%
GGACGCATTGCTGGTGGTTG+TGG + Chr1:69987351-69987370 None:intergenic 60.0%
TACCAGTGGAGCCACTGCAC+CGG + Chr1:69989034-69989053 None:intergenic 60.0%
! GCGAGCCTGAGATGCCACTT+TGG - Chr1:69988588-69988607 MsG0180003909.01.T01:intron 60.0%
!! CGCACTCTAGGACGCATTGC+TGG + Chr1:69987360-69987379 None:intergenic 60.0%
!! CTCCTCGGTGCCAATTTGGG+TGG - Chr1:69986442-69986461 MsG0180003909.01.T01:three_prime_UTR 60.0%
AAGGTGAGAGGCAGCGTCGC+CGG + Chr1:69986085-69986104 None:intergenic 65.0%
ATTGGGTGGAGCCGGTGCAG+TGG - Chr1:69989020-69989039 MsG0180003909.01.T01:intron 65.0%
CCGGAAACGCTTCCCACTCC+CGG + Chr1:69986202-69986221 None:intergenic 65.0%
GAAACCCTCCTCCAGCGCCA+AGG + Chr1:69986104-69986123 None:intergenic 65.0%
GAGGCGATCGATGGGACCAC+TGG + Chr1:69989421-69989440 None:intergenic 65.0%
GCCCACCCAAATTGGCACCG+AGG + Chr1:69986447-69986466 None:intergenic 65.0%
GCTGGTGGTTGTGGAGCAGC+AGG + Chr1:69987342-69987361 None:intergenic 65.0%
TCCTCCAGCGCCAAGGTGAG+AGG + Chr1:69986097-69986116 None:intergenic 65.0%
TCGTCGGCGGGTGTATCGGA+AGG + Chr1:69985979-69985998 None:intergenic 65.0%
! CTCACCTTGGCGCTGGAGGA+GGG - Chr1:69986097-69986116 MsG0180003909.01.T01:three_prime_UTR 65.0%
! TCTCACCTTGGCGCTGGAGG+AGG - Chr1:69986096-69986115 MsG0180003909.01.T01:three_prime_UTR 65.0%
!! AGAAGCGTCGGTTCCGTCGG+CGG + Chr1:69986040-69986059 None:intergenic 65.0%
!! CCGGGAGTGGGAAGCGTTTC+CGG - Chr1:69986199-69986218 MsG0180003909.01.T01:three_prime_UTR 65.0%
!! CGGAGAAGCGTCGGTTCCGT+CGG + Chr1:69986043-69986062 None:intergenic 65.0%
!! CGGGAGTGGGAAGCGTTTCC+GGG - Chr1:69986200-69986219 MsG0180003909.01.T01:three_prime_UTR 65.0%
!! GAGTGGGAAGCGTTTCCGGG+AGG - Chr1:69986203-69986222 MsG0180003909.01.T01:three_prime_UTR 65.0%
AGCCGGTGCAGTGGCTCCAC+TGG - Chr1:69989029-69989048 MsG0180003909.01.T01:intron 70.0%
GCTGCCTCTCACCTTGGCGC+TGG - Chr1:69986090-69986109 MsG0180003909.01.T01:three_prime_UTR 70.0%
GGCGACGCTGCCTCTCACCT+TGG - Chr1:69986084-69986103 MsG0180003909.01.T01:three_prime_UTR 70.0%
! GCCTCTCACCTTGGCGCTGG+AGG - Chr1:69986093-69986112 MsG0180003909.01.T01:three_prime_UTR 70.0%
!! AGCGTCGGTTCCGTCGGCGG+AGG + Chr1:69986037-69986056 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr1 gene 69985829 69990295 69985829 ID=MsG0180003909.01;Name=MsG0180003909.01
Chr1 mRNA 69985829 69990295 69985829 ID=MsG0180003909.01.T01;Parent=MsG0180003909.01;Name=MsG0180003909.01.T01;_AED=0.45;_eAED=0.45;_QI=135|1|1|1|1|1|6|908|282
Chr1 exon 69985829 69986967 69985829 ID=MsG0180003909.01.T01:exon:52291;Parent=MsG0180003909.01.T01
Chr1 exon 69987044 69987121 69987044 ID=MsG0180003909.01.T01:exon:52290;Parent=MsG0180003909.01.T01
Chr1 exon 69987711 69987776 69987711 ID=MsG0180003909.01.T01:exon:52289;Parent=MsG0180003909.01.T01
Chr1 exon 69988505 69988570 69988505 ID=MsG0180003909.01.T01:exon:52288;Parent=MsG0180003909.01.T01
Chr1 exon 69988699 69988818 69988699 ID=MsG0180003909.01.T01:exon:52287;Parent=MsG0180003909.01.T01
Chr1 exon 69989873 69990295 69989873 ID=MsG0180003909.01.T01:exon:52286;Parent=MsG0180003909.01.T01
Chr1 five_prime_UTR 69990161 69990295 69990161 ID=MsG0180003909.01.T01:five_prime_utr;Parent=MsG0180003909.01.T01
Chr1 CDS 69989873 69990160 69989873 ID=MsG0180003909.01.T01:cds;Parent=MsG0180003909.01.T01
Chr1 CDS 69988699 69988818 69988699 ID=MsG0180003909.01.T01:cds;Parent=MsG0180003909.01.T01
Chr1 CDS 69988505 69988570 69988505 ID=MsG0180003909.01.T01:cds;Parent=MsG0180003909.01.T01
Chr1 CDS 69987711 69987776 69987711 ID=MsG0180003909.01.T01:cds;Parent=MsG0180003909.01.T01
Chr1 CDS 69987044 69987121 69987044 ID=MsG0180003909.01.T01:cds;Parent=MsG0180003909.01.T01
Chr1 CDS 69986737 69986967 69986737 ID=MsG0180003909.01.T01:cds;Parent=MsG0180003909.01.T01
Chr1 three_prime_UTR 69985829 69986736 69985829 ID=MsG0180003909.01.T01:three_prime_utr;Parent=MsG0180003909.01.T01
Gene Sequence

>MsG0180003909.01.T01

ATGGCGAATCATCCTTCCGATACACCCGCCGACGATTTCCTTGAACAAATTCTCGGTCTTCCGAATTTCACCTCCGCCGACGGAACCGACGCTTCTCCGATGATGCTGCAGCTTAACTCCGGCGACGCTGCCTCTCACCTTGGCGCTGGAGGAGGGTTTCATGCACCGGTTTATCATTTGGGTTTGAGCTTGGACCAGGGTAAAGGAGGAGGGTTTTTGAAGCCTGATGAAGCTTCCGGGAGTGGGAAGCGTTTCCGGGAGGATCTTGTTGATACAAGACCTAAGAATACTTTTCATGGGCAACCCATGCCTACTACAGTTCCTGCTGCTCCACAACCACCAGCAATGCGTCCTAGAGTGCGGGCAAGAAGAGGACAGGCTACAGATCCCCACAGCATCGCTGAAAGGTTGCGCAGAGAAAGAATAGCTGAAAGAATCAGGGCCTTGCAAGAACTTGTTCCTAGTGTCAACAAGACTGATCGAGCTGCCATGCTGGATGAAATTGTGGATTATGTCAAATTCTTAAGGCTTCAAGTGAAGGTTTTGAGCATGAGTAGATTGGGTGGAGCCGGTGCAGTGGCTCCACTGGTAACTGACATCCCATTATCGTCAGTCGAGGAAGAAGGAAGTGAGAGTGGGAGAAACCAACCAGCTTGGGAGAAGTGGTCTAATGATGGCACAGAAAAGCAAGTAGCTAAGCTCATGGAAGAAAATGTTGGGGCTGCAATGCAGTTTCTTCAATCAAAGGCTCTCTGCATAATGCCCATCTCACTGGCATCTGCAATATACCAATCGCAACCATCAGACAACTCCAGTATAGTTAAGCCTGAAACTATTCCTCCTCCATAG
Protein sequence

>MsG0180003909.01.T01

MANHPSDTPADDFLEQILGLPNFTSADGTDASPMMLQLNSGDAASHLGAGGGFHAPVYHLGLSLDQGKGGGFLKPDEASGSGKRFREDLVDTRPKNTFHGQPMPTTVPAAPQPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSSVEEEGSESGRNQPAWEKWSNDGTEKQVAKLMEENVGAAMQFLQSKALCIMPISLASAIYQSQPSDNSSIVKPETIPPP*