Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004140.01.T01 | XP_003590850.2 | 82.389 | 653 | 54 | 3 | 1 | 592 | 1 | 653 | 0 | 1028 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004140.01.T01 | Q9LUZ4 | 49.668 | 602 | 245 | 17 | 21 | 583 | 2 | 584 | 0 | 529 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004140.01.T01 | G7I4W5 | 82.389 | 653 | 54 | 3 | 1 | 592 | 1 | 653 | 0.0 | 1028 |
| Gene ID | Type | Classification |
|---|---|---|
| MsG0180004140.01.T01 | TF | C3H |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004140.01.T01 | MTR_1g075890 | 82.389 | 653 | 54 | 3 | 1 | 592 | 1 | 653 | 0.0 | 1028 |
| MsG0180004140.01.T01 | MTR_3g464260 | 70.557 | 557 | 77 | 7 | 37 | 592 | 29 | 499 | 0.0 | 741 |
| MsG0180004140.01.T01 | MTR_3g464280 | 66.961 | 566 | 113 | 7 | 1 | 564 | 1 | 494 | 0.0 | 684 |
| MsG0180004140.01.T01 | MTR_5g071070 | 53.382 | 680 | 215 | 17 | 1 | 591 | 1 | 667 | 0.0 | 618 |
| MsG0180004140.01.T01 | MTR_5g082830 | 46.341 | 656 | 239 | 15 | 19 | 586 | 13 | 643 | 0.0 | 535 |
| MsG0180004140.01.T01 | MTR_5g071070 | 53.010 | 598 | 181 | 16 | 81 | 591 | 1 | 585 | 0.0 | 529 |
| MsG0180004140.01.T01 | MTR_7g092070 | 40.875 | 663 | 254 | 17 | 33 | 586 | 47 | 680 | 1.45e-145 | 438 |
| MsG0180004140.01.T01 | MTR_3g070880 | 44.271 | 576 | 200 | 18 | 31 | 583 | 8 | 485 | 4.30e-143 | 424 |
| MsG0180004140.01.T01 | MTR_3g464290 | 56.813 | 433 | 143 | 10 | 177 | 591 | 54 | 460 | 5.65e-131 | 392 |
| MsG0180004140.01.T01 | MTR_3g029590 | 38.529 | 680 | 263 | 23 | 30 | 588 | 42 | 687 | 8.52e-128 | 392 |
| MsG0180004140.01.T01 | MTR_3g464270 | 53.083 | 373 | 140 | 7 | 222 | 582 | 8 | 357 | 2.60e-114 | 345 |
| MsG0180004140.01.T01 | MTR_1g050438 | 40.948 | 464 | 222 | 10 | 33 | 451 | 15 | 471 | 5.25e-103 | 323 |
| MsG0180004140.01.T01 | MTR_0728s0020 | 40.948 | 464 | 222 | 10 | 33 | 451 | 31 | 487 | 1.91e-102 | 323 |
| MsG0180004140.01.T01 | MTR_3g435590 | 47.091 | 361 | 174 | 5 | 30 | 374 | 29 | 388 | 3.16e-102 | 318 |
| MsG0180004140.01.T01 | MTR_3g435680 | 62.416 | 149 | 54 | 1 | 198 | 346 | 128 | 274 | 3.79e-65 | 218 |
| MsG0180004140.01.T01 | MTR_8g102100 | 54.268 | 164 | 69 | 1 | 219 | 376 | 77 | 240 | 6.84e-55 | 191 |
| MsG0180004140.01.T01 | MTR_6g090380 | 70.093 | 107 | 32 | 0 | 219 | 325 | 99 | 205 | 2.93e-53 | 186 |
| MsG0180004140.01.T01 | MTR_3g103960 | 60.448 | 134 | 51 | 2 | 213 | 344 | 43 | 176 | 2.40e-51 | 178 |
| MsG0180004140.01.T01 | MTR_2g090605 | 62.162 | 111 | 42 | 0 | 223 | 333 | 77 | 187 | 1.67e-48 | 174 |
| MsG0180004140.01.T01 | MTR_4g078660 | 57.944 | 107 | 45 | 0 | 219 | 325 | 56 | 162 | 2.04e-45 | 163 |
| MsG0180004140.01.T01 | MTR_1g081420 | 51.546 | 97 | 32 | 2 | 441 | 530 | 140 | 228 | 1.22e-17 | 82.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004140.01.T01 | AT5G58620 | 49.668 | 602 | 245 | 17 | 21 | 583 | 2 | 584 | 0.0 | 529 |
| MsG0180004140.01.T01 | AT3G55980 | 45.910 | 599 | 256 | 14 | 1 | 583 | 1 | 547 | 4.96e-167 | 488 |
| MsG0180004140.01.T01 | AT3G55980 | 45.910 | 599 | 256 | 14 | 1 | 583 | 68 | 614 | 3.96e-166 | 488 |
| MsG0180004140.01.T01 | AT2G40140 | 46.667 | 600 | 258 | 16 | 1 | 583 | 1 | 555 | 6.77e-166 | 486 |
| MsG0180004140.01.T01 | AT2G40140 | 46.667 | 600 | 258 | 16 | 1 | 583 | 1 | 555 | 6.77e-166 | 486 |
| MsG0180004140.01.T01 | AT5G12850 | 41.329 | 617 | 257 | 20 | 25 | 548 | 34 | 638 | 1.49e-135 | 412 |
| MsG0180004140.01.T01 | AT2G41900 | 46.921 | 471 | 183 | 8 | 25 | 447 | 40 | 491 | 3.59e-133 | 405 |
| MsG0180004140.01.T01 | AT4G29190 | 40.351 | 285 | 122 | 10 | 192 | 464 | 49 | 297 | 1.77e-56 | 194 |
| MsG0180004140.01.T01 | AT5G07500 | 60.331 | 121 | 48 | 0 | 205 | 325 | 34 | 154 | 4.25e-52 | 179 |
| MsG0180004140.01.T01 | AT2G19810 | 63.115 | 122 | 43 | 1 | 208 | 327 | 61 | 182 | 4.52e-52 | 182 |
| MsG0180004140.01.T01 | AT2G25900 | 58.915 | 129 | 53 | 0 | 219 | 347 | 86 | 214 | 5.44e-52 | 181 |
| MsG0180004140.01.T01 | AT2G25900 | 58.915 | 129 | 53 | 0 | 219 | 347 | 86 | 214 | 5.44e-52 | 181 |
| MsG0180004140.01.T01 | AT1G03790 | 49.153 | 177 | 76 | 5 | 190 | 362 | 53 | 219 | 4.20e-49 | 176 |
| MsG0180004140.01.T01 | AT5G44260 | 57.812 | 128 | 49 | 2 | 201 | 327 | 42 | 165 | 2.13e-46 | 168 |
Find 148 sgRNAs with CRISPR-Local
Find 162 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTCTTCATTGTGCTGTTTC+TGG | 0.119133 | 1:+73909027 | MsG0180004140.01.T01:CDS |
| CTTGTCAAACTGGTTTGATT+AGG | 0.230886 | 1:+73908713 | MsG0180004140.01.T01:CDS |
| ATGAGGAAAACTTATTCTTT+TGG | 0.268225 | 1:+73910308 | MsG0180004140.01.T01:CDS |
| GGTGTGTTGTCTTATATTCT+TGG | 0.275343 | 1:+73908955 | MsG0180004140.01.T01:CDS |
| GAACGCCATTATATCATCTT+TGG | 0.288121 | 1:-73908800 | None:intergenic |
| TTGTCAAACTGGTTTGATTA+GGG | 0.297404 | 1:+73908714 | MsG0180004140.01.T01:CDS |
| GAACTTGAAAATCGCCTTAC+AGG | 0.298409 | 1:+73909939 | MsG0180004140.01.T01:CDS |
| ACGTTCTGCCTTCTCTGGTT+GGG | 0.305180 | 1:+73910232 | MsG0180004140.01.T01:CDS |
| TATATAGTACAGATGAATTT+AGG | 0.309340 | 1:+73909340 | MsG0180004140.01.T01:CDS |
| GACGATTTCCTTAAGAAAAT+AGG | 0.314739 | 1:+73909219 | MsG0180004140.01.T01:CDS |
| CTTGTTGTTGCTCCACCATT+TGG | 0.317761 | 1:-73909245 | None:intergenic |
| CTTATGGTTGCTGCTTTGTT+TGG | 0.322501 | 1:+73908925 | MsG0180004140.01.T01:CDS |
| GAGCACAAACCAGCAACTTT+GGG | 0.343665 | 1:+73910058 | MsG0180004140.01.T01:CDS |
| AATAGAAAACCTTGTCAAAC+TGG | 0.348122 | 1:+73908703 | MsG0180004140.01.T01:CDS |
| GTGTCCCTTGCCCCGAGTTT+CGG | 0.352020 | 1:+73909484 | MsG0180004140.01.T01:CDS |
| TGTTGATCAAATTCCATTGT+TGG | 0.356576 | 1:-73910440 | None:intergenic |
| CAAGGGCTTATTCTCATGAT+TGG | 0.357705 | 1:+73909391 | MsG0180004140.01.T01:CDS |
| TCTCCTTCAAATAGGCTTGC+AGG | 0.358629 | 1:+73909969 | MsG0180004140.01.T01:CDS |
| AAGGATTGCCCCAAAGTTGC+TGG | 0.360358 | 1:-73910067 | None:intergenic |
| TTCAGCCAAAGATGATATAA+TGG | 0.367048 | 1:+73908795 | MsG0180004140.01.T01:CDS |
| CTTACCAATTCAAATGTGAT+TGG | 0.367908 | 1:+73910095 | MsG0180004140.01.T01:CDS |
| TGATCCAATCACATTTGAAT+TGG | 0.381273 | 1:-73910099 | None:intergenic |
| AGAGCACAAACCAGCAACTT+TGG | 0.387067 | 1:+73910057 | MsG0180004140.01.T01:CDS |
| TGCTGCGCTCAATAAAGCTT+TGG | 0.390375 | 1:-73910157 | None:intergenic |
| GAAGGTTGGATCAAAAGAAA+TGG | 0.391384 | 1:+73908882 | MsG0180004140.01.T01:CDS |
| CGACCGTTGCATGCTTCCAC+TGG | 0.395037 | 1:+73909660 | MsG0180004140.01.T01:CDS |
| TGAAGAGAGGACACCTCTTA+TGG | 0.399251 | 1:+73908909 | MsG0180004140.01.T01:CDS |
| AACGTTCTGCCTTCTCTGGT+TGG | 0.399281 | 1:+73910231 | MsG0180004140.01.T01:CDS |
| TTGTCTTATATTCTTGGAAC+CGG | 0.399584 | 1:+73908961 | MsG0180004140.01.T01:CDS |
| GTCTTGCATCTCCTTCAAAT+AGG | 0.399881 | 1:+73909961 | MsG0180004140.01.T01:CDS |
| CCGCTCATGCAAACGGTAAC+CGG | 0.401655 | 1:+73909112 | MsG0180004140.01.T01:CDS |
| ATGGAACGTTCTGCCTTCTC+TGG | 0.406240 | 1:+73910227 | MsG0180004140.01.T01:CDS |
| GTGAATCAACCCAAGATTCA+TGG | 0.407246 | 1:-73910403 | None:intergenic |
| TTTGAATTGGTAAGATCAAA+AGG | 0.409476 | 1:-73910086 | None:intergenic |
| CTAAGAGTATCTTCGGTTCA+AGG | 0.415813 | 1:+73909160 | MsG0180004140.01.T01:CDS |
| TCAAAGTGAAGCCTTGTTCA+AGG | 0.431149 | 1:+73909373 | MsG0180004140.01.T01:CDS |
| TGCAACGGTCGAAGCTCCTC+TGG | 0.431203 | 1:-73909648 | None:intergenic |
| TGCTGCTTTGTTTGGAAGCA+AGG | 0.432478 | 1:+73908933 | MsG0180004140.01.T01:CDS |
| TCTGGTTGGGGCTCTCCTGA+TGG | 0.432980 | 1:+73910245 | MsG0180004140.01.T01:CDS |
| GAGTGCCCCTTTGTTCAACC+TGG | 0.438001 | 1:+73909417 | MsG0180004140.01.T01:CDS |
| CGTTCTGCCTTCTCTGGTTG+GGG | 0.438457 | 1:+73910233 | MsG0180004140.01.T01:CDS |
| TTCTCCCCAGGTTGAACAAA+GGG | 0.438980 | 1:-73909423 | None:intergenic |
| TATATTCCATTCTTTATGTC+AGG | 0.439563 | 1:-73909321 | None:intergenic |
| AACAAAGCAGCAACCATAAG+AGG | 0.442942 | 1:-73908922 | None:intergenic |
| ACCGAGCGTGCGGCTCAGAT+AGG | 0.449079 | 1:+73908998 | MsG0180004140.01.T01:CDS |
| TTCTGCTAGCTCAGTTGCCA+TGG | 0.451503 | 1:+73910208 | MsG0180004140.01.T01:CDS |
| AAGGTTGGATCAAAAGAAAT+GGG | 0.451915 | 1:+73908883 | MsG0180004140.01.T01:CDS |
| TCGGTTTCTAAGAGTATCTT+CGG | 0.453417 | 1:+73909153 | MsG0180004140.01.T01:CDS |
| GGAAGGGATCATGCAACAAA+GGG | 0.458959 | 1:+73909505 | MsG0180004140.01.T01:CDS |
| ACTCCTGCAAGCCTATTTGA+AGG | 0.462316 | 1:-73909972 | None:intergenic |
| TTATGGTATGGAAGGAAGGT+TGG | 0.462581 | 1:+73908868 | MsG0180004140.01.T01:CDS |
| GCATGATCCCTTCCGAAACT+CGG | 0.472085 | 1:-73909496 | None:intergenic |
| CCCTATCTGAGCCGCACGCT+CGG | 0.476697 | 1:-73908999 | None:intergenic |
| GTTGATTCACTTGTGAATGA+TGG | 0.479955 | 1:+73910416 | MsG0180004140.01.T01:CDS |
| ACTGAGTTCATCGCCGCGGA+TGG | 0.480494 | 1:-73910282 | None:intergenic |
| CATGATCCCTTCCGAAACTC+GGG | 0.480869 | 1:-73909495 | None:intergenic |
| GTCAGGTAGGGATGGATCCA+TGG | 0.481206 | 1:-73909304 | None:intergenic |
| TCCATTCTTTATGTCAGGTA+GGG | 0.481887 | 1:-73909316 | None:intergenic |
| TTCTTTATGTCAGGTAGGGA+TGG | 0.483088 | 1:-73909312 | None:intergenic |
| CCCTTCCGAAACTCGGGGCA+AGG | 0.484081 | 1:-73909489 | None:intergenic |
| TGCCACATGGTTCCAGCCTT+AGG | 0.487354 | 1:-73909819 | None:intergenic |
| CGGCGCCTTGCATTCTCCCC+AGG | 0.487495 | 1:-73909435 | None:intergenic |
| CCCTTGCCCCGAGTTTCGGA+AGG | 0.487676 | 1:+73909488 | MsG0180004140.01.T01:CDS |
| TTCACCAAGTGCTTCTTCGA+TGG | 0.489966 | 1:+73909716 | MsG0180004140.01.T01:CDS |
| GAAAATAGGTTTCCAAATGG+TGG | 0.491205 | 1:+73909233 | MsG0180004140.01.T01:CDS |
| GCAGCATCATCGCCTAAGGC+TGG | 0.493703 | 1:+73909807 | MsG0180004140.01.T01:CDS |
| CTTCTCGGCATCTGAAGGGT+AGG | 0.494265 | 1:-73909870 | None:intergenic |
| GAGCTAGCAGAAGGAAGCTC+AGG | 0.496235 | 1:-73910197 | None:intergenic |
| ATCTGCTTCTCGGCATCTGA+AGG | 0.497474 | 1:-73909875 | None:intergenic |
| AGCCTTGTTCTGTATTGAGC+AGG | 0.498591 | 1:-73909573 | None:intergenic |
| AGGGTTATGGTATGGAAGGA+AGG | 0.505824 | 1:+73908864 | MsG0180004140.01.T01:CDS |
| AGCTTTATTGAGCGCAGCAG+CGG | 0.509673 | 1:+73910161 | MsG0180004140.01.T01:CDS |
| TCCCTACCTGACATAAAGAA+TGG | 0.512480 | 1:+73909315 | MsG0180004140.01.T01:CDS |
| AGTGCCCCTTTGTTCAACCT+GGG | 0.517209 | 1:+73909418 | MsG0180004140.01.T01:CDS |
| TAAGAAAATAGGTTTCCAAA+TGG | 0.517234 | 1:+73909230 | MsG0180004140.01.T01:CDS |
| CAAAGTGAAGCCTTGTTCAA+GGG | 0.517860 | 1:+73909374 | MsG0180004140.01.T01:CDS |
| GCTTTGGCTCCGCTTCGAAA+AGG | 0.520561 | 1:-73910141 | None:intergenic |
| AAGTAGGGTTATGGTATGGA+AGG | 0.522426 | 1:+73908860 | MsG0180004140.01.T01:CDS |
| GTGCAGTGACTTGATTGTCT+CGG | 0.522663 | 1:+73909134 | MsG0180004140.01.T01:CDS |
| ATCTGCAGCATCATCGCCTA+AGG | 0.525855 | 1:+73909803 | MsG0180004140.01.T01:CDS |
| GATCATGATGTTGATGAAGT+AGG | 0.526063 | 1:+73908844 | MsG0180004140.01.T01:CDS |
| GGTGAATTTGAATATGATGT+AGG | 0.526620 | 1:-73909699 | None:intergenic |
| CCGGTTACCGTTTGCATGAG+CGG | 0.526654 | 1:-73909112 | None:intergenic |
| ATGTTGATGAAGTAGGGTTA+TGG | 0.527912 | 1:+73908851 | MsG0180004140.01.T01:CDS |
| GTATCTTCGGTTCAAGGAAG+AGG | 0.528667 | 1:+73909166 | MsG0180004140.01.T01:CDS |
| GCTGCTTTGTTTGGAAGCAA+GGG | 0.529208 | 1:+73908934 | MsG0180004140.01.T01:CDS |
| ATCATGATGTTGATGAAGTA+GGG | 0.530587 | 1:+73908845 | MsG0180004140.01.T01:CDS |
| TTCAACCTGGGGAGAATGCA+AGG | 0.530956 | 1:+73909430 | MsG0180004140.01.T01:CDS |
| GTTAGTTCCGCTCATGCAAA+CGG | 0.541373 | 1:+73909105 | MsG0180004140.01.T01:CDS |
| AAGGAGATGCAAGACCTGTA+AGG | 0.541933 | 1:-73909953 | None:intergenic |
| AGGAGAGCCCCAACCAGAGA+AGG | 0.547335 | 1:-73910240 | None:intergenic |
| CCGAGCGTGCGGCTCAGATA+GGG | 0.547437 | 1:+73908999 | MsG0180004140.01.T01:CDS |
| CTCCTGATGGAAAATTAGAC+TGG | 0.548612 | 1:+73910258 | MsG0180004140.01.T01:CDS |
| CGGAAGGGATCATGCAACAA+AGG | 0.550435 | 1:+73909504 | MsG0180004140.01.T01:CDS |
| TTCTCGGCATCTGAAGGGTA+GGG | 0.550744 | 1:-73909869 | None:intergenic |
| CACGTGTAATGATATTTCCT+CGG | 0.552027 | 1:-73909462 | None:intergenic |
| AATGATATTTCCTCGGATCA+CGG | 0.552863 | 1:-73909455 | None:intergenic |
| CAGAAGTAGCACTTCAACAA+TGG | 0.559092 | 1:+73910340 | MsG0180004140.01.T01:CDS |
| TCGGTTAACATCAACGCGGC+CGG | 0.559271 | 1:-73908980 | None:intergenic |
| TTCCATTCTTTATGTCAGGT+AGG | 0.576271 | 1:-73909317 | None:intergenic |
| CCTTCCGAAACTCGGGGCAA+GGG | 0.578389 | 1:-73909488 | None:intergenic |
| AGAGAAGGCAGAACGTTCCA+TGG | 0.578816 | 1:-73910225 | None:intergenic |
| TGAAACTAGATGCACGAGAA+GGG | 0.581662 | 1:+73909605 | MsG0180004140.01.T01:CDS |
| TTAGGCGATGATGCTGCAGA+TGG | 0.582325 | 1:-73909801 | None:intergenic |
| GTGCCCCTTTGTTCAACCTG+GGG | 0.583668 | 1:+73909419 | MsG0180004140.01.T01:CDS |
| TTGATTAGGGAAAATGAATG+TGG | 0.584217 | 1:+73908727 | MsG0180004140.01.T01:CDS |
| TGAAGGTAGAGCAGAACCAG+TGG | 0.585309 | 1:-73909676 | None:intergenic |
| CTAATCAAACCAGTTTGACA+AGG | 0.588552 | 1:-73908712 | None:intergenic |
| GTGCTCTGATGCATTGATGT+CGG | 0.590144 | 1:-73910041 | None:intergenic |
| ATGAAACTAGATGCACGAGA+AGG | 0.590481 | 1:+73909604 | MsG0180004140.01.T01:CDS |
| TCAGGTAGGGATGGATCCAT+GGG | 0.592467 | 1:-73909303 | None:intergenic |
| GAATCCATCGAAGAAGCACT+TGG | 0.592531 | 1:-73909720 | None:intergenic |
| ATGCAAGGCGCCGTGATCCG+AGG | 0.595327 | 1:+73909445 | MsG0180004140.01.T01:CDS |
| CCTTGCCCCGAGTTTCGGAA+GGG | 0.595695 | 1:+73909489 | MsG0180004140.01.T01:CDS |
| ATACAGAACAAGGCTTTGCA+AGG | 0.598747 | 1:+73909581 | MsG0180004140.01.T01:CDS |
| GATGAAGTAGGGTTATGGTA+TGG | 0.604921 | 1:+73908856 | MsG0180004140.01.T01:CDS |
| GTGGAGCAACAACAAGATGT+AGG | 0.606526 | 1:+73909252 | MsG0180004140.01.T01:CDS |
| ATTCTCCCCAGGTTGAACAA+AGG | 0.606975 | 1:-73909424 | None:intergenic |
| TTGGCTGAAAACTCAAGCAA+AGG | 0.608890 | 1:-73908781 | None:intergenic |
| TGAGAAGAAAGATTATCCCA+TGG | 0.621054 | 1:+73909287 | MsG0180004140.01.T01:CDS |
| TCTGCTTCTCGGCATCTGAA+GGG | 0.621299 | 1:-73909874 | None:intergenic |
| ATGGCAACTGAGCTAGCAGA+AGG | 0.621567 | 1:-73910206 | None:intergenic |
| GCGATGAACTCAGTAAAATG+AGG | 0.622640 | 1:+73910291 | MsG0180004140.01.T01:CDS |
| AAGAAATGGGATATGAAGAG+AGG | 0.624986 | 1:+73908896 | MsG0180004140.01.T01:CDS |
| TGAGAATAAGCCCTTGAACA+AGG | 0.627841 | 1:-73909384 | None:intergenic |
| AAAACAAAAGTCATGTGCAA+CGG | 0.630659 | 1:+73908676 | None:intergenic |
| AAGCAAAAGTTTGACAACCT+CGG | 0.631058 | 1:-73909067 | None:intergenic |
| ATCCTGCTCAATACAGAACA+AGG | 0.635511 | 1:+73909571 | MsG0180004140.01.T01:CDS |
| TGTGAATGATGGTCCAACAA+TGG | 0.642483 | 1:+73910427 | MsG0180004140.01.T01:CDS |
| GAACCAGTGGAAGCATGCAA+CGG | 0.644293 | 1:-73909663 | None:intergenic |
| AGACAATCAAGTCACTGCAC+CGG | 0.647436 | 1:-73909131 | None:intergenic |
| CTGAATCTGAGTCTGCCACA+TGG | 0.647805 | 1:-73909832 | None:intergenic |
| GTTGATGTTAACCGAGCGTG+CGG | 0.649710 | 1:+73908988 | MsG0180004140.01.T01:CDS |
| GATGCTGCAGATGGAGTCAA+AGG | 0.650089 | 1:-73909792 | None:intergenic |
| TTTGAATATGATGTAGGTGA+AGG | 0.654129 | 1:-73909693 | None:intergenic |
| AAATTAGACTGGTCCATCCG+CGG | 0.660945 | 1:+73910269 | MsG0180004140.01.T01:CDS |
| GCAGATTGTATCGAAGAAGA+CGG | 0.671424 | 1:-73909759 | None:intergenic |
| TCAAGGAAGAGGATACTACA+AGG | 0.674650 | 1:+73909177 | MsG0180004140.01.T01:CDS |
| AGCACAAACCAGCAACTTTG+GGG | 0.680243 | 1:+73910059 | MsG0180004140.01.T01:CDS |
| ACAAGGCAATGTTGATGACG+AGG | 0.685237 | 1:+73909194 | MsG0180004140.01.T01:CDS |
| TCTCCCCAGGTTGAACAAAG+GGG | 0.687449 | 1:-73909422 | None:intergenic |
| CGCCTAAGGCTGGAACCATG+TGG | 0.696210 | 1:+73909817 | MsG0180004140.01.T01:CDS |
| ATGATCCCTTCCGAAACTCG+GGG | 0.698351 | 1:-73909494 | None:intergenic |
| GCTGCAGATGGAGTCAAAGG+TGG | 0.704806 | 1:-73909789 | None:intergenic |
| GAAGGGATCATGCAACAAAG+GGG | 0.715610 | 1:+73909506 | MsG0180004140.01.T01:CDS |
| AGAAACAGCACAATGAAGAG+CGG | 0.722067 | 1:-73909025 | None:intergenic |
| GATGCTTGTGAATATGCACA+TGG | 0.754358 | 1:+73909528 | MsG0180004140.01.T01:CDS |
| ACGCTCGGTTAACATCAACG+CGG | 0.858999 | 1:-73908984 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATAGTACAGATGAATTT+AGG | + | Chr1:73909340-73909359 | MsG0180004140.01.T01:CDS | 20.0% |
| ! | TAAGAAAATAGGTTTCCAAA+TGG | + | Chr1:73909230-73909249 | MsG0180004140.01.T01:CDS | 25.0% |
| ! | TATATTCCATTCTTTATGTC+AGG | - | Chr1:73909324-73909343 | None:intergenic | 25.0% |
| ! | TCATGGCTTAAAAATATATC+TGG | - | Chr1:73910389-73910408 | None:intergenic | 25.0% |
| ! | TTTGAATTGGTAAGATCAAA+AGG | - | Chr1:73910089-73910108 | None:intergenic | 25.0% |
| !! | ATGAGGAAAACTTATTCTTT+TGG | + | Chr1:73910308-73910327 | MsG0180004140.01.T01:CDS | 25.0% |
| !! | TTTGGAAACCTATTTTCTTA+AGG | - | Chr1:73909230-73909249 | None:intergenic | 25.0% |
| !!! | ATTTTTAAGCCATGAATCTT+GGG | + | Chr1:73910394-73910413 | MsG0180004140.01.T01:CDS | 25.0% |
| !!! | TATTTTTAAGCCATGAATCT+TGG | + | Chr1:73910393-73910412 | MsG0180004140.01.T01:CDS | 25.0% |
| AAGGTTGGATCAAAAGAAAT+GGG | + | Chr1:73908883-73908902 | MsG0180004140.01.T01:CDS | 30.0% | |
| AATAGAAAACCTTGTCAAAC+TGG | + | Chr1:73908703-73908722 | MsG0180004140.01.T01:CDS | 30.0% | |
| CTTACCAATTCAAATGTGAT+TGG | + | Chr1:73910095-73910114 | MsG0180004140.01.T01:CDS | 30.0% | |
| GACGATTTCCTTAAGAAAAT+AGG | + | Chr1:73909219-73909238 | MsG0180004140.01.T01:CDS | 30.0% | |
| GGTGAATTTGAATATGATGT+AGG | - | Chr1:73909702-73909721 | None:intergenic | 30.0% | |
| TGATCCAATCACATTTGAAT+TGG | - | Chr1:73910102-73910121 | None:intergenic | 30.0% | |
| TGTTGATCAAATTCCATTGT+TGG | - | Chr1:73910443-73910462 | None:intergenic | 30.0% | |
| TTCAGCCAAAGATGATATAA+TGG | + | Chr1:73908795-73908814 | MsG0180004140.01.T01:CDS | 30.0% | |
| TTGATTAGGGAAAATGAATG+TGG | + | Chr1:73908727-73908746 | MsG0180004140.01.T01:CDS | 30.0% | |
| TTGTCTTATATTCTTGGAAC+CGG | + | Chr1:73908961-73908980 | MsG0180004140.01.T01:CDS | 30.0% | |
| TTTGAATATGATGTAGGTGA+AGG | - | Chr1:73909696-73909715 | None:intergenic | 30.0% | |
| ! | ATCATGATGTTGATGAAGTA+GGG | + | Chr1:73908845-73908864 | MsG0180004140.01.T01:CDS | 30.0% |
| !! | AAAATGTTTTCAAGGCTAGT+AGG | - | Chr1:73910002-73910021 | None:intergenic | 30.0% |
| !! | TTGTCAAACTGGTTTGATTA+GGG | + | Chr1:73908714-73908733 | MsG0180004140.01.T01:CDS | 30.0% |
| !!! | ACTAGCCTTGAAAACATTTT+CGG | + | Chr1:73910002-73910021 | MsG0180004140.01.T01:CDS | 30.0% |
| AAGAAATGGGATATGAAGAG+AGG | + | Chr1:73908896-73908915 | MsG0180004140.01.T01:CDS | 35.0% | |
| AAGCAAAAGTTTGACAACCT+CGG | - | Chr1:73909070-73909089 | None:intergenic | 35.0% | |
| AATGATATTTCCTCGGATCA+CGG | - | Chr1:73909458-73909477 | None:intergenic | 35.0% | |
| CACGTGTAATGATATTTCCT+CGG | - | Chr1:73909465-73909484 | None:intergenic | 35.0% | |
| CTAATCAAACCAGTTTGACA+AGG | - | Chr1:73908715-73908734 | None:intergenic | 35.0% | |
| GAAAATAGGTTTCCAAATGG+TGG | + | Chr1:73909233-73909252 | MsG0180004140.01.T01:CDS | 35.0% | |
| GAACGCCATTATATCATCTT+TGG | - | Chr1:73908803-73908822 | None:intergenic | 35.0% | |
| GAAGGTTGGATCAAAAGAAA+TGG | + | Chr1:73908882-73908901 | MsG0180004140.01.T01:CDS | 35.0% | |
| GGTGTGTTGTCTTATATTCT+TGG | + | Chr1:73908955-73908974 | MsG0180004140.01.T01:CDS | 35.0% | |
| TCCATTCTTTATGTCAGGTA+GGG | - | Chr1:73909319-73909338 | None:intergenic | 35.0% | |
| TGAGAAGAAAGATTATCCCA+TGG | + | Chr1:73909287-73909306 | MsG0180004140.01.T01:CDS | 35.0% | |
| TTCCATTCTTTATGTCAGGT+AGG | - | Chr1:73909320-73909339 | None:intergenic | 35.0% | |
| ! | ATGACCCGAAAATGTTTTCA+AGG | - | Chr1:73910010-73910029 | None:intergenic | 35.0% |
| ! | ATGTTGATGAAGTAGGGTTA+TGG | + | Chr1:73908851-73908870 | MsG0180004140.01.T01:CDS | 35.0% |
| ! | GATCATGATGTTGATGAAGT+AGG | + | Chr1:73908844-73908863 | MsG0180004140.01.T01:CDS | 35.0% |
| ! | GTTGATTCACTTGTGAATGA+TGG | + | Chr1:73910416-73910435 | MsG0180004140.01.T01:CDS | 35.0% |
| !! | CACATGGTATTTTTGAATGC+TGG | + | Chr1:73909544-73909563 | MsG0180004140.01.T01:CDS | 35.0% |
| !! | CTTGTCAAACTGGTTTGATT+AGG | + | Chr1:73908713-73908732 | MsG0180004140.01.T01:CDS | 35.0% |
| !! | TCGGTTTCTAAGAGTATCTT+CGG | + | Chr1:73909153-73909172 | MsG0180004140.01.T01:CDS | 35.0% |
| !!! | CTAGCCTTGAAAACATTTTC+GGG | + | Chr1:73910003-73910022 | MsG0180004140.01.T01:CDS | 35.0% |
| !!! | GCAGTTTTAAATCTGCTTCT+CGG | - | Chr1:73909888-73909907 | None:intergenic | 35.0% |
| AACAAAGCAGCAACCATAAG+AGG | - | Chr1:73908925-73908944 | None:intergenic | 40.0% | |
| AAGTAGGGTTATGGTATGGA+AGG | + | Chr1:73908860-73908879 | MsG0180004140.01.T01:CDS | 40.0% | |
| AGAAACAGCACAATGAAGAG+CGG | - | Chr1:73909028-73909047 | None:intergenic | 40.0% | |
| ATACAGAACAAGGCTTTGCA+AGG | + | Chr1:73909581-73909600 | MsG0180004140.01.T01:CDS | 40.0% | |
| ATCCTGCTCAATACAGAACA+AGG | + | Chr1:73909571-73909590 | MsG0180004140.01.T01:CDS | 40.0% | |
| ATGAAACTAGATGCACGAGA+AGG | + | Chr1:73909604-73909623 | MsG0180004140.01.T01:CDS | 40.0% | |
| CAAGGGCTTATTCTCATGAT+TGG | + | Chr1:73909391-73909410 | MsG0180004140.01.T01:CDS | 40.0% | |
| CAGAAGTAGCACTTCAACAA+TGG | + | Chr1:73910340-73910359 | MsG0180004140.01.T01:CDS | 40.0% | |
| CTCCTGATGGAAAATTAGAC+TGG | + | Chr1:73910258-73910277 | MsG0180004140.01.T01:CDS | 40.0% | |
| GAACTTGAAAATCGCCTTAC+AGG | + | Chr1:73909939-73909958 | MsG0180004140.01.T01:CDS | 40.0% | |
| GATGAAGTAGGGTTATGGTA+TGG | + | Chr1:73908856-73908875 | MsG0180004140.01.T01:CDS | 40.0% | |
| GATGCTTGTGAATATGCACA+TGG | + | Chr1:73909528-73909547 | MsG0180004140.01.T01:CDS | 40.0% | |
| GCAGATTGTATCGAAGAAGA+CGG | - | Chr1:73909762-73909781 | None:intergenic | 40.0% | |
| GCGATGAACTCAGTAAAATG+AGG | + | Chr1:73910291-73910310 | MsG0180004140.01.T01:CDS | 40.0% | |
| GTCTTGCATCTCCTTCAAAT+AGG | + | Chr1:73909961-73909980 | MsG0180004140.01.T01:CDS | 40.0% | |
| GTGAATCAACCCAAGATTCA+TGG | - | Chr1:73910406-73910425 | None:intergenic | 40.0% | |
| TCAAGGAAGAGGATACTACA+AGG | + | Chr1:73909177-73909196 | MsG0180004140.01.T01:CDS | 40.0% | |
| TCCCTACCTGACATAAAGAA+TGG | + | Chr1:73909315-73909334 | MsG0180004140.01.T01:CDS | 40.0% | |
| TGAAACTAGATGCACGAGAA+GGG | + | Chr1:73909605-73909624 | MsG0180004140.01.T01:CDS | 40.0% | |
| TGAGAATAAGCCCTTGAACA+AGG | - | Chr1:73909387-73909406 | None:intergenic | 40.0% | |
| TGTGAATGATGGTCCAACAA+TGG | + | Chr1:73910427-73910446 | MsG0180004140.01.T01:CDS | 40.0% | |
| TTATGGTATGGAAGGAAGGT+TGG | + | Chr1:73908868-73908887 | MsG0180004140.01.T01:CDS | 40.0% | |
| TTCTTTATGTCAGGTAGGGA+TGG | - | Chr1:73909315-73909334 | None:intergenic | 40.0% | |
| TTGGCTGAAAACTCAAGCAA+AGG | - | Chr1:73908784-73908803 | None:intergenic | 40.0% | |
| ! | GACCAGTCTAATTTTCCATC+AGG | - | Chr1:73910263-73910282 | None:intergenic | 40.0% |
| !! | CAAAGTGAAGCCTTGTTCAA+GGG | + | Chr1:73909374-73909393 | MsG0180004140.01.T01:CDS | 40.0% |
| !! | CTAAGAGTATCTTCGGTTCA+AGG | + | Chr1:73909160-73909179 | MsG0180004140.01.T01:CDS | 40.0% |
| !! | CTTATGGTTGCTGCTTTGTT+TGG | + | Chr1:73908925-73908944 | MsG0180004140.01.T01:CDS | 40.0% |
| !! | TCAAAGTGAAGCCTTGTTCA+AGG | + | Chr1:73909373-73909392 | MsG0180004140.01.T01:CDS | 40.0% |
| AAGGAGATGCAAGACCTGTA+AGG | - | Chr1:73909956-73909975 | None:intergenic | 45.0% | |
| ACTCCTGCAAGCCTATTTGA+AGG | - | Chr1:73909975-73909994 | None:intergenic | 45.0% | |
| AGACAATCAAGTCACTGCAC+CGG | - | Chr1:73909134-73909153 | None:intergenic | 45.0% | |
| AGAGCACAAACCAGCAACTT+TGG | + | Chr1:73910057-73910076 | MsG0180004140.01.T01:CDS | 45.0% | |
| AGCACAAACCAGCAACTTTG+GGG | + | Chr1:73910059-73910078 | MsG0180004140.01.T01:CDS | 45.0% | |
| AGGGTTATGGTATGGAAGGA+AGG | + | Chr1:73908864-73908883 | MsG0180004140.01.T01:CDS | 45.0% | |
| GAAGGGATCATGCAACAAAG+GGG | + | Chr1:73909506-73909525 | MsG0180004140.01.T01:CDS | 45.0% | |
| GAGCACAAACCAGCAACTTT+GGG | + | Chr1:73910058-73910077 | MsG0180004140.01.T01:CDS | 45.0% | |
| GGAAGGGATCATGCAACAAA+GGG | + | Chr1:73909505-73909524 | MsG0180004140.01.T01:CDS | 45.0% | |
| GTATCTTCGGTTCAAGGAAG+AGG | + | Chr1:73909166-73909185 | MsG0180004140.01.T01:CDS | 45.0% | |
| GTGCAGTGACTTGATTGTCT+CGG | + | Chr1:73909134-73909153 | MsG0180004140.01.T01:CDS | 45.0% | |
| GTGGAGCAACAACAAGATGT+AGG | + | Chr1:73909252-73909271 | MsG0180004140.01.T01:CDS | 45.0% | |
| GTTAGTTCCGCTCATGCAAA+CGG | + | Chr1:73909105-73909124 | MsG0180004140.01.T01:CDS | 45.0% | |
| TCTCCTTCAAATAGGCTTGC+AGG | + | Chr1:73909969-73909988 | MsG0180004140.01.T01:CDS | 45.0% | |
| TGAAGAGAGGACACCTCTTA+TGG | + | Chr1:73908909-73908928 | MsG0180004140.01.T01:CDS | 45.0% | |
| TGCTGCGCTCAATAAAGCTT+TGG | - | Chr1:73910160-73910179 | None:intergenic | 45.0% | |
| TTCACCAAGTGCTTCTTCGA+TGG | + | Chr1:73909716-73909735 | MsG0180004140.01.T01:CDS | 45.0% | |
| ! | AAATTAGACTGGTCCATCCG+CGG | + | Chr1:73910269-73910288 | MsG0180004140.01.T01:CDS | 45.0% |
| ! | ATTCTCCCCAGGTTGAACAA+AGG | - | Chr1:73909427-73909446 | None:intergenic | 45.0% |
| ! | GTGCTCTGATGCATTGATGT+CGG | - | Chr1:73910044-73910063 | None:intergenic | 45.0% |
| ! | TTCTCCCCAGGTTGAACAAA+GGG | - | Chr1:73909426-73909445 | None:intergenic | 45.0% |
| ! | TTTTACTGAGTTCATCGCCG+CGG | - | Chr1:73910289-73910308 | None:intergenic | 45.0% |
| !! | ACAAGGCAATGTTGATGACG+AGG | + | Chr1:73909194-73909213 | MsG0180004140.01.T01:CDS | 45.0% |
| !! | AGCCTTGTTCTGTATTGAGC+AGG | - | Chr1:73909576-73909595 | None:intergenic | 45.0% |
| !! | CTTGTTGTTGCTCCACCATT+TGG | - | Chr1:73909248-73909267 | None:intergenic | 45.0% |
| !! | GAATCCATCGAAGAAGCACT+TGG | - | Chr1:73909723-73909742 | None:intergenic | 45.0% |
| !! | GCTCTTCATTGTGCTGTTTC+TGG | + | Chr1:73909027-73909046 | MsG0180004140.01.T01:CDS | 45.0% |
| !! | GCTGCTTTGTTTGGAAGCAA+GGG | + | Chr1:73908934-73908953 | MsG0180004140.01.T01:CDS | 45.0% |
| !! | TGCTGCTTTGTTTGGAAGCA+AGG | + | Chr1:73908933-73908952 | MsG0180004140.01.T01:CDS | 45.0% |
| !!! | GAGTTGATGCCTTTTCGAAG+CGG | + | Chr1:73910132-73910151 | MsG0180004140.01.T01:CDS | 45.0% |
| AACGTTCTGCCTTCTCTGGT+TGG | + | Chr1:73910231-73910250 | MsG0180004140.01.T01:CDS | 50.0% | |
| AAGGATTGCCCCAAAGTTGC+TGG | - | Chr1:73910070-73910089 | None:intergenic | 50.0% | |
| ACGCTCGGTTAACATCAACG+CGG | - | Chr1:73908987-73909006 | None:intergenic | 50.0% | |
| ACGTTCTGCCTTCTCTGGTT+GGG | + | Chr1:73910232-73910251 | MsG0180004140.01.T01:CDS | 50.0% | |
| AGAGAAGGCAGAACGTTCCA+TGG | - | Chr1:73910228-73910247 | None:intergenic | 50.0% | |
| AGTGCCCCTTTGTTCAACCT+GGG | + | Chr1:73909418-73909437 | MsG0180004140.01.T01:CDS | 50.0% | |
| ATCTGCAGCATCATCGCCTA+AGG | + | Chr1:73909803-73909822 | MsG0180004140.01.T01:CDS | 50.0% | |
| ATCTGCTTCTCGGCATCTGA+AGG | - | Chr1:73909878-73909897 | None:intergenic | 50.0% | |
| ATGATCCCTTCCGAAACTCG+GGG | - | Chr1:73909497-73909516 | None:intergenic | 50.0% | |
| ATGGAACGTTCTGCCTTCTC+TGG | + | Chr1:73910227-73910246 | MsG0180004140.01.T01:CDS | 50.0% | |
| ATGGCAACTGAGCTAGCAGA+AGG | - | Chr1:73910209-73910228 | None:intergenic | 50.0% | |
| CATGATCCCTTCCGAAACTC+GGG | - | Chr1:73909498-73909517 | None:intergenic | 50.0% | |
| CGGAAGGGATCATGCAACAA+AGG | + | Chr1:73909504-73909523 | MsG0180004140.01.T01:CDS | 50.0% | |
| CTGAATCTGAGTCTGCCACA+TGG | - | Chr1:73909835-73909854 | None:intergenic | 50.0% | |
| GATGCTGCAGATGGAGTCAA+AGG | - | Chr1:73909795-73909814 | None:intergenic | 50.0% | |
| GCATGATCCCTTCCGAAACT+CGG | - | Chr1:73909499-73909518 | None:intergenic | 50.0% | |
| GTTGATGTTAACCGAGCGTG+CGG | + | Chr1:73908988-73909007 | MsG0180004140.01.T01:CDS | 50.0% | |
| TCAGGTAGGGATGGATCCAT+GGG | - | Chr1:73909306-73909325 | None:intergenic | 50.0% | |
| TCTGCTTCTCGGCATCTGAA+GGG | - | Chr1:73909877-73909896 | None:intergenic | 50.0% | |
| TGAAGGTAGAGCAGAACCAG+TGG | - | Chr1:73909679-73909698 | None:intergenic | 50.0% | |
| TTAGGCGATGATGCTGCAGA+TGG | - | Chr1:73909804-73909823 | None:intergenic | 50.0% | |
| TTCAACCTGGGGAGAATGCA+AGG | + | Chr1:73909430-73909449 | MsG0180004140.01.T01:CDS | 50.0% | |
| TTCTCGGCATCTGAAGGGTA+GGG | - | Chr1:73909872-73909891 | None:intergenic | 50.0% | |
| TTCTGCTAGCTCAGTTGCCA+TGG | + | Chr1:73910208-73910227 | MsG0180004140.01.T01:CDS | 50.0% | |
| ! | GAACCAGTGGAAGCATGCAA+CGG | - | Chr1:73909666-73909685 | None:intergenic | 50.0% |
| ! | TCTCCCCAGGTTGAACAAAG+GGG | - | Chr1:73909425-73909444 | None:intergenic | 50.0% |
| !! | AGCTTTATTGAGCGCAGCAG+CGG | + | Chr1:73910161-73910180 | MsG0180004140.01.T01:CDS | 50.0% |
| !! | CTTTTTCGCTCACAAGCCAG+AGG | + | Chr1:73909632-73909651 | MsG0180004140.01.T01:CDS | 50.0% |
| !! | TTTTTCTGCTGCTTCTGCCG+AGG | + | Chr1:73909050-73909069 | MsG0180004140.01.T01:CDS | 50.0% |
| CCGCTCATGCAAACGGTAAC+CGG | + | Chr1:73909112-73909131 | MsG0180004140.01.T01:CDS | 55.0% | |
| CCGGTTACCGTTTGCATGAG+CGG | - | Chr1:73909115-73909134 | None:intergenic | 55.0% | |
| CGTTCTGCCTTCTCTGGTTG+GGG | + | Chr1:73910233-73910252 | MsG0180004140.01.T01:CDS | 55.0% | |
| CTTCTCGGCATCTGAAGGGT+AGG | - | Chr1:73909873-73909892 | None:intergenic | 55.0% | |
| GAGCTAGCAGAAGGAAGCTC+AGG | - | Chr1:73910200-73910219 | None:intergenic | 55.0% | |
| GAGTGCCCCTTTGTTCAACC+TGG | + | Chr1:73909417-73909436 | MsG0180004140.01.T01:CDS | 55.0% | |
| GCTGCAGATGGAGTCAAAGG+TGG | - | Chr1:73909792-73909811 | None:intergenic | 55.0% | |
| GTCAGGTAGGGATGGATCCA+TGG | - | Chr1:73909307-73909326 | None:intergenic | 55.0% | |
| GTGCCCCTTTGTTCAACCTG+GGG | + | Chr1:73909419-73909438 | MsG0180004140.01.T01:CDS | 55.0% | |
| TCGGTTAACATCAACGCGGC+CGG | - | Chr1:73908983-73909002 | None:intergenic | 55.0% | |
| TGCCACATGGTTCCAGCCTT+AGG | - | Chr1:73909822-73909841 | None:intergenic | 55.0% | |
| ! | GCTTTGGCTCCGCTTCGAAA+AGG | - | Chr1:73910144-73910163 | None:intergenic | 55.0% |
| ACTGAGTTCATCGCCGCGGA+TGG | - | Chr1:73910285-73910304 | None:intergenic | 60.0% | |
| AGGAGAGCCCCAACCAGAGA+AGG | - | Chr1:73910243-73910262 | None:intergenic | 60.0% | |
| CCTTCCGAAACTCGGGGCAA+GGG | - | Chr1:73909491-73909510 | None:intergenic | 60.0% | |
| CCTTGCCCCGAGTTTCGGAA+GGG | + | Chr1:73909489-73909508 | MsG0180004140.01.T01:CDS | 60.0% | |
| CGACCGTTGCATGCTTCCAC+TGG | + | Chr1:73909660-73909679 | MsG0180004140.01.T01:CDS | 60.0% | |
| CGCCTAAGGCTGGAACCATG+TGG | + | Chr1:73909817-73909836 | MsG0180004140.01.T01:CDS | 60.0% | |
| GCAGCATCATCGCCTAAGGC+TGG | + | Chr1:73909807-73909826 | MsG0180004140.01.T01:CDS | 60.0% | |
| GTGTCCCTTGCCCCGAGTTT+CGG | + | Chr1:73909484-73909503 | MsG0180004140.01.T01:CDS | 60.0% | |
| TCTGGTTGGGGCTCTCCTGA+TGG | + | Chr1:73910245-73910264 | MsG0180004140.01.T01:CDS | 60.0% | |
| TGCAACGGTCGAAGCTCCTC+TGG | - | Chr1:73909651-73909670 | None:intergenic | 60.0% | |
| ACCGAGCGTGCGGCTCAGAT+AGG | + | Chr1:73908998-73909017 | MsG0180004140.01.T01:CDS | 65.0% | |
| CCCTATCTGAGCCGCACGCT+CGG | - | Chr1:73909002-73909021 | None:intergenic | 65.0% | |
| CCCTTCCGAAACTCGGGGCA+AGG | - | Chr1:73909492-73909511 | None:intergenic | 65.0% | |
| CCCTTGCCCCGAGTTTCGGA+AGG | + | Chr1:73909488-73909507 | MsG0180004140.01.T01:CDS | 65.0% | |
| CCGAGCGTGCGGCTCAGATA+GGG | + | Chr1:73908999-73909018 | MsG0180004140.01.T01:CDS | 65.0% | |
| !! | ATGCAAGGCGCCGTGATCCG+AGG | + | Chr1:73909445-73909464 | MsG0180004140.01.T01:CDS | 65.0% |
| CGGCGCCTTGCATTCTCCCC+AGG | - | Chr1:73909438-73909457 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 73908688 | 73910466 | 73908688 | ID=MsG0180004140.01;Name=MsG0180004140.01 |
| Chr1 | mRNA | 73908688 | 73910466 | 73908688 | ID=MsG0180004140.01.T01;Parent=MsG0180004140.01;Name=MsG0180004140.01.T01;_AED=0.26;_eAED=0.26;_QI=0|-1|0|1|-1|1|1|0|592 |
| Chr1 | exon | 73908688 | 73910466 | 73908688 | ID=MsG0180004140.01.T01:exon:31456;Parent=MsG0180004140.01.T01 |
| Chr1 | CDS | 73908688 | 73910466 | 73908688 | ID=MsG0180004140.01.T01:cds;Parent=MsG0180004140.01.T01 |
| Gene Sequence |
| Protein sequence |
