AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180004209.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180004209.01.T01 MTR_1g077160 88.477 243 10 2 53 277 247 489 3.16e-149 427
MsG0180004209.01.T01 MTR_1g077160 75.785 223 36 2 53 257 3 225 6.08e-118 347
MsG0180004209.01.T01 MTR_6g065670 76.860 242 38 2 53 276 3 244 7.31e-136 384
MsG0180004209.01.T01 MTR_6g065670 76.923 208 30 2 87 276 10 217 4.02e-112 322
MsG0180004209.01.T01 MTR_4g020470 56.561 221 77 3 57 258 7 227 9.27e-76 230
MsG0180004209.01.T01 MTR_5g047580 67.857 56 18 0 1 56 1 56 7.15e-18 79.0
MsG0180004209.01.T01 MTR_1g077390 39.706 136 70 6 1 129 1 131 2.43e-15 72.0
MsG0180004209.01.T01 MTR_1g090783 62.963 54 20 0 3 56 2 55 2.75e-15 72.0
MsG0180004209.01.T01 MTR_1g090710 57.143 56 24 0 1 56 1 56 1.31e-13 67.4
MsG0180004209.01.T01 MTR_1g077320 54.667 75 32 2 1 73 1 75 7.37e-13 65.5
MsG0180004209.01.T01 MTR_4g028720 67.857 56 18 0 1 56 1 56 9.48e-13 65.1
MsG0180004209.01.T01 MTR_1g090697 45.455 77 41 1 1 76 1 77 2.40e-12 63.9
MsG0180004209.01.T01 MTR_7g011950 53.333 75 33 2 1 73 1 75 1.57e-11 61.6
MsG0180004209.01.T01 MTR_1g077300 62.500 56 21 0 1 56 1 56 1.68e-11 61.6
MsG0180004209.01.T01 MTR_1g084950 62.500 56 21 0 1 56 1 56 5.89e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180004209.01.T01 AT3G55620 78.926 242 33 2 53 276 3 244 8.27e-141 396
MsG0180004209.01.T01 AT2G39820 59.916 237 76 3 59 276 10 246 3.10e-100 293

Find 60 sgRNAs with CRISPR-Local

Find 320 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCAAGTTCCTTTGGTTGC+TGG 0.212007 1:+74869830 MsG0180004209.01.T01:CDS
AGAGAACTCAATATTCTTTA+TGG 0.214259 1:+74865113 MsG0180004209.01.T01:CDS
AGCCTTCCTTGCTAAATAAT+TGG 0.275040 1:-74865051 None:intergenic
TTCAAGTTCCTTTGGTTGCT+GGG 0.277665 1:+74869831 MsG0180004209.01.T01:CDS
TGCTAAATAATTGGAGATAA+AGG 0.292175 1:-74865042 None:intergenic
CACACTTCTTCAAGTTCCTT+TGG 0.315454 1:+74869823 MsG0180004209.01.T01:CDS
ACTTACCAATGCCTATTGTT+TGG 0.372192 1:+74867719 MsG0180004209.01.T01:CDS
TTTGAGAATTCTTGTGAAGT+TGG 0.394920 1:+74867684 MsG0180004209.01.T01:CDS
ACTTACCAAACCACCTTTGT+TGG 0.395916 1:-74869687 None:intergenic
CGCTGAACACGAACTCGATC+AGG 0.398607 1:-74869358 None:intergenic
AGAAGAAAGATTATCTGCTC+TGG 0.409070 1:+74869384 MsG0180004209.01.T01:CDS
GAGGTGGTTGCAGATGTTCT+TGG 0.417853 1:+74869602 MsG0180004209.01.T01:CDS
GCCTATTGTTTGGTTGCCAT+TGG 0.418721 1:+74867729 MsG0180004209.01.T01:CDS
TTTCTCCAACAAAGGTGGTT+TGG 0.423593 1:+74869682 MsG0180004209.01.T01:CDS
CTCCAATTATTTAGCAAGGA+AGG 0.449283 1:+74865049 MsG0180004209.01.T01:CDS
AAGTCTTCAATGGAAGTATG+AGG 0.464023 1:-74869788 None:intergenic
TCCAATGGCAACCAAACAAT+AGG 0.466817 1:-74867730 None:intergenic
ATGAGGAAATCTCTCTTTGA+TGG 0.467048 1:+74870007 MsG0180004209.01.T01:CDS
GAGGTTCTGAAAATTTCTAC+AGG 0.487019 1:+74867751 MsG0180004209.01.T01:CDS
TCATACTTCCATTGAAGACT+TGG 0.488797 1:+74869790 MsG0180004209.01.T01:CDS
CTGGCATGACAGTAAATGAT+TGG 0.493234 1:+74869885 MsG0180004209.01.T01:CDS
GTTGCTGGTAATATTCTTGT+CGG 0.494249 1:+74869647 MsG0180004209.01.T01:CDS
ATCCACAATGGCACTAGCCT+TGG 0.497457 1:-74869981 None:intergenic
TAGTTCATCCAAGTCTTCAA+TGG 0.502098 1:-74869798 None:intergenic
TATTGTTTGGTTGCCATTGG+AGG 0.502972 1:+74867732 MsG0180004209.01.T01:CDS
GAAGAAAGATTATCTGCTCT+GGG 0.518423 1:+74869385 MsG0180004209.01.T01:CDS
GCAAGGCCATGGCTAGGAGT+AGG 0.521343 1:+74865009 None:intergenic
TGATACATACAGTGCATTTG+AGG 0.523339 1:+74867859 MsG0180004209.01.T01:intron
CAAGGCCATGGCTAGGAGTA+GGG 0.537523 1:+74865010 None:intergenic
ATTGGTGGTACTCGTAATGT+TGG 0.538428 1:+74867920 MsG0180004209.01.T01:CDS
TACTGCACTTTCTCCAACAA+AGG 0.539666 1:+74869674 MsG0180004209.01.T01:CDS
AATGTTGGTCGTCTTTGTAT+CGG 0.547720 1:+74867935 MsG0180004209.01.T01:CDS
TGCCTACATGCGGAGAAAGA+AGG 0.549399 1:+74865073 MsG0180004209.01.T01:CDS
CCTGTGATCAAAACTTCCAT+TGG 0.553035 1:+74867902 MsG0180004209.01.T01:CDS
AGCCAAGGCTAGTGCCATTG+TGG 0.567238 1:+74869979 MsG0180004209.01.T01:CDS
GGCAACCAAACAATAGGCAT+TGG 0.568934 1:-74867724 None:intergenic
GTGATCAAAACTTCCATTGG+TGG 0.570848 1:+74867905 MsG0180004209.01.T01:CDS
TGCATTGCAAGGCCATGGCT+AGG 0.571000 1:+74865003 None:intergenic
TTATCTCCAATTATTTAGCA+AGG 0.573320 1:+74865045 MsG0180004209.01.T01:CDS
CAAAGGAACTTGAAGAAGTG+TGG 0.578440 1:-74869822 None:intergenic
AAAGAAGGCTCTCTTTGAGA+AGG 0.588827 1:+74865088 MsG0180004209.01.T01:CDS
TGTCGAGATCAGTGTGTGTG+AGG 0.593800 1:-74869438 None:intergenic
TGCACTTTCTCCAACAAAGG+TGG 0.596892 1:+74869677 MsG0180004209.01.T01:CDS
TTTCAAGCTGAGGGAAGCCA+AGG 0.608007 1:+74869964 MsG0180004209.01.T01:CDS
AACATTACGAGTACCACCAA+TGG 0.614763 1:-74867918 None:intergenic
GGTAGCGAAGTAATAGCTGC+TGG 0.614892 1:+74869866 MsG0180004209.01.T01:CDS
TTTCACCCTACTCCTAGCCA+TGG 0.617946 1:-74865015 None:intergenic
CAGTGTGTGTGAGGGCCACA+TGG 0.619457 1:-74869429 None:intergenic
TTCACAGTCCCAGCAACCAA+AGG 0.624153 1:-74869839 None:intergenic
GTCGAGATCAGTGTGTGTGA+GGG 0.631278 1:-74869437 None:intergenic
AGTCTTCAATGGAAGTATGA+GGG 0.638291 1:-74869787 None:intergenic
CAAGGAAGGCTGCCTACATG+CGG 0.644135 1:+74865063 MsG0180004209.01.T01:CDS
AGCCTTCTTTCTCCGCATGT+AGG 0.644142 1:-74865075 None:intergenic
CACACACACTGATCTCGACA+AGG 0.656922 1:+74869441 MsG0180004209.01.T01:CDS
CAGCTATTACTTCGCTACCA+CGG 0.658644 1:-74869862 None:intergenic
AGTGTCTGAACCACAAAATG+CGG 0.691406 1:-74869909 None:intergenic
GTGCCATTGTGGATGAGATG+AGG 0.692514 1:+74869990 MsG0180004209.01.T01:CDS
TTTCCTCATCTCATCCACAA+TGG 0.697492 1:-74869993 None:intergenic
GTTGCTGGGACTGTGAACCG+TGG 0.717810 1:+74869845 MsG0180004209.01.T01:CDS
TATAGCGTGTAATGACCATG+TGG 0.799174 1:+74869414 MsG0180004209.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAAAATTAATAAAATAAT+AGG - Chr1:74866014-74866033 None:intergenic 0.0%
!! ATTTAATAATAATTATAAAA+TGG + Chr1:74866034-74866053 MsG0180004209.01.T01:intron 0.0%
!! AATATAATAAAAGTAGATTA+TGG + Chr1:74866076-74866095 MsG0180004209.01.T01:intron 10.0%
!! AATCAATATTATTAACATTT+AGG + Chr1:74867438-74867457 MsG0180004209.01.T01:intron 10.0%
!! ACAAATAATAACATAATAAT+AGG - Chr1:74868176-74868195 None:intergenic 10.0%
!! ATTTAATTAACATATTATGT+CGG - Chr1:74866848-74866867 None:intergenic 10.0%
!! TACAAAAATTGAAATAAATT+CGG + Chr1:74867243-74867262 MsG0180004209.01.T01:intron 10.0%
!! TTGAAAAAAAAAATTAATCA+AGG + Chr1:74866126-74866145 MsG0180004209.01.T01:intron 10.0%
!!! AAAATTGTGTTTTATTTAAT+AGG - Chr1:74866946-74866965 None:intergenic 10.0%
!!! AAATTGTGTTTTATTTAATA+GGG - Chr1:74866945-74866964 None:intergenic 10.0%
!!! TATTAAATAAAACACAATTT+TGG + Chr1:74866945-74866964 MsG0180004209.01.T01:intron 10.0%
!! ACAACTTATCTAATAAAAAA+AGG + Chr1:74865625-74865644 MsG0180004209.01.T01:intron 15.0%
!! TTAGTAAAACAATAAAATGT+TGG + Chr1:74868018-74868037 MsG0180004209.01.T01:intron 15.0%
!!! AATTGTGTTTTATTTAATAG+GGG - Chr1:74866944-74866963 None:intergenic 15.0%
!!! ACATTTTATTGTTTTACTAA+AGG - Chr1:74868018-74868037 None:intergenic 15.0%
!!! TACAAAAAAAAAAAAAGTGT+AGG - Chr1:74867278-74867297 None:intergenic 15.0%
!!! TTATTCATAAGCTATAATTT+TGG - Chr1:74866664-74866683 None:intergenic 15.0%
!! AATTGAAATAAATTCGGTAT+CGG + Chr1:74867249-74867268 MsG0180004209.01.T01:intron 20.0%
!! ACAATATGAAATGTAATTGA+GGG + Chr1:74868703-74868722 MsG0180004209.01.T01:intron 20.0%
!! ATAAGTTGTTACAAAAGATA+TGG - Chr1:74865524-74865543 None:intergenic 20.0%
!! ATATTTATATCCCAAAATCA+CGG - Chr1:74868546-74868565 None:intergenic 20.0%
!! ATTTATTAAGCAATTCATCA+CGG - Chr1:74868874-74868893 None:intergenic 20.0%
!! TACAATATGAAATGTAATTG+AGG + Chr1:74868702-74868721 MsG0180004209.01.T01:intron 20.0%
!! TCAATTACATTTCATATTGT+AGG - Chr1:74868703-74868722 None:intergenic 20.0%
!! TCTCATTAACAATTTACAAA+TGG - Chr1:74866602-74866621 None:intergenic 20.0%
!! TTAAAATTGAAACATTCAAG+AGG - Chr1:74869724-74869743 None:intergenic 20.0%
!! TTTATGAACATACTTACTAT+TGG + Chr1:74868092-74868111 MsG0180004209.01.T01:intron 20.0%
!!! AACCTACTTTTGTTTATATA+AGG + Chr1:74868498-74868517 MsG0180004209.01.T01:intron 20.0%
!!! AAGGTCAATATTGATTATTT+TGG + Chr1:74866145-74866164 MsG0180004209.01.T01:intron 20.0%
!!! AGATTTTCTTTCTTATCTTA+AGG - Chr1:74865445-74865464 None:intergenic 20.0%
!!! ATTGTGTTTTATTTAATAGG+GGG - Chr1:74866943-74866962 None:intergenic 20.0%
!!! ATTTTGGGATATAAATATCA+TGG + Chr1:74868548-74868567 MsG0180004209.01.T01:intron 20.0%
!!! CAGATTTTATTTCTTATCTT+AGG + Chr1:74865405-74865424 MsG0180004209.01.T01:intron 20.0%
!!! TTTGGTTTCCTATTAAAAAA+TGG - Chr1:74867163-74867182 None:intergenic 20.0%
!!! TTTGTTTTCATATGTATCAT+TGG + Chr1:74867468-74867487 MsG0180004209.01.T01:intron 20.0%
!!! TTTTTTTTCCATCAAAGAAA+GGG + Chr1:74869154-74869173 MsG0180004209.01.T01:intron 20.0%
!!! TTTTTTTTTCCATCAAAGAA+AGG + Chr1:74869153-74869172 MsG0180004209.01.T01:intron 20.0%
! AATAAGTAATCTTCTGCAAA+AGG - Chr1:74865283-74865302 None:intergenic 25.0%
! AGAGAACTCAATATTCTTTA+TGG + Chr1:74865113-74865132 MsG0180004209.01.T01:CDS 25.0%
! ATTACATTTCATATTGTAGG+AGG - Chr1:74868700-74868719 None:intergenic 25.0%
! ATTCATAAACATGCAGAAAA+TGG - Chr1:74867379-74867398 None:intergenic 25.0%
! CAATATGAAATGTAATTGAG+GGG + Chr1:74868704-74868723 MsG0180004209.01.T01:intron 25.0%
! CTTTGACCTACTTATAATTA+AGG - Chr1:74868448-74868467 None:intergenic 25.0%
! GTTGATTGATAAAAGATTCT+AGG - Chr1:74869053-74869072 None:intergenic 25.0%
! TAACATTGCAGATATTAACT+TGG + Chr1:74867532-74867551 MsG0180004209.01.T01:intron 25.0%
! TACTCTTTATAAAGTCCATA+AGG - Chr1:74865988-74866007 None:intergenic 25.0%
! TATTTATATCCCAAAATCAC+GGG - Chr1:74868545-74868564 None:intergenic 25.0%
! TGCTAAATAATTGGAGATAA+AGG + Chr1:74865868-74865887 MsG0180004209.01.T01:intron 25.0%
! TGCTAAATAATTGGAGATAA+AGG - Chr1:74865887-74865868 None:intergenic 25.0%
! TTAAGATTAGCACACAAAAA+AGG - Chr1:74869489-74869508 None:intergenic 25.0%
! TTATCTCCAATTATTTAGCA+AGG + Chr1:74865045-74865064 MsG0180004209.01.T01:CDS 25.0%
! TTATCTCCAATTATTTAGCA+AGG - Chr1:74865064-74865045 None:intergenic 25.0%
! TTTGTTTATATAAGGCTAGA+AGG + Chr1:74868506-74868525 MsG0180004209.01.T01:intron 25.0%
!! AAGAAAATTTGTCACTGATT+TGG - Chr1:74867995-74868014 None:intergenic 25.0%
!! AGCCTTATATAAACAAAAGT+AGG - Chr1:74868503-74868522 None:intergenic 25.0%
!! CATCTATCATAGATGAATTT+TGG - Chr1:74865232-74865251 None:intergenic 25.0%
!! CATCTATGATAGATGAATTT+TGG + Chr1:74865677-74865696 MsG0180004209.01.T01:intron 25.0%
!! GATTTTTGTCATCTTTATCA+TGG + Chr1:74867569-74867588 MsG0180004209.01.T01:intron 25.0%
!!! AATCGCAACATTTTAAAACT+TGG + Chr1:74867182-74867201 MsG0180004209.01.T01:intron 25.0%
!!! ACCTCTGTTTTAGAATTAAA+AGG + Chr1:74865746-74865765 MsG0180004209.01.T01:intron 25.0%
!!! ACCTCTGTTTTAGAATTAAA+AGG - Chr1:74865765-74865746 None:intergenic 25.0%
!!! AGGATATTGATCTTTTTTCA+TGG + Chr1:74869297-74869316 MsG0180004209.01.T01:intron 25.0%
!!! ATCGCAACATTTTAAAACTT+GGG + Chr1:74867183-74867202 MsG0180004209.01.T01:intron 25.0%
!!! CACTTTTGCCATTTTTTAAT+AGG + Chr1:74867152-74867171 MsG0180004209.01.T01:intron 25.0%
!!! CGCACTTTTTATAAAGATAA+GGG + Chr1:74867027-74867046 MsG0180004209.01.T01:intron 25.0%
!!! GCACTTTTTATAAAGATAAG+GGG + Chr1:74867028-74867047 MsG0180004209.01.T01:intron 25.0%
!!! GTTGTCTTTTTTACAAAGAA+AGG + Chr1:74868321-74868340 MsG0180004209.01.T01:intron 25.0%
!!! GTTTTAAAATGTTGCGATTT+TGG - Chr1:74867181-74867200 None:intergenic 25.0%
!!! TCCTTTTAATTCTAAAACAG+AGG + Chr1:74865163-74865182 MsG0180004209.01.T01:CDS 25.0%
!!! TCCTTTTAATTCTAAAACAG+AGG - Chr1:74865182-74865163 None:intergenic 25.0%
!!! TCGCACTTTTTATAAAGATA+AGG + Chr1:74867026-74867045 MsG0180004209.01.T01:intron 25.0%
!!! TCGGTAAATTATTTTTTCCT+TGG + Chr1:74867954-74867973 MsG0180004209.01.T01:intron 25.0%
!!! TTTATTTTGCTTTTGCCTTA+TGG + Chr1:74865970-74865989 MsG0180004209.01.T01:intron 25.0%
!!! TTTTTTTCCATCAAAGAAAG+GGG + Chr1:74869155-74869174 MsG0180004209.01.T01:intron 25.0%
AAACAGAACGTAATAAACTG+AGG + Chr1:74865324-74865343 MsG0180004209.01.T01:intron 30.0%
AAACATATTTCCCTTACGTT+AGG + Chr1:74867055-74867074 MsG0180004209.01.T01:intron 30.0%
AAATGAGAACGACAGATTAT+AGG - Chr1:74868755-74868774 None:intergenic 30.0%
AACATATTTCCCTTACGTTA+GGG + Chr1:74867056-74867075 MsG0180004209.01.T01:intron 30.0%
AACATATTTCGCTAAACATG+AGG + Chr1:74867127-74867146 MsG0180004209.01.T01:intron 30.0%
ACATATTTCGCTAAACATGA+GGG + Chr1:74867128-74867147 MsG0180004209.01.T01:intron 30.0%
AGAGAACTCACTATTCTTTA+TGG - Chr1:74865800-74865819 None:intergenic 30.0%
AGATGTTTCACGATATACAA+TGG - Chr1:74868290-74868309 None:intergenic 30.0%
AGCATTTCTTTCCTCATATA+TGG + Chr1:74869199-74869218 MsG0180004209.01.T01:intron 30.0%
AGTCTTCCTTGCTAAATAAT+TGG + Chr1:74865859-74865878 MsG0180004209.01.T01:intron 30.0%
AGTTGCAGTGGAAATATATT+CGG - Chr1:74867811-74867830 None:intergenic 30.0%
ATAGTGCTACAAAGCTTATA+TGG + Chr1:74868892-74868911 MsG0180004209.01.T01:intron 30.0%
ATGAAAACAAAGAATCTACG+AGG - Chr1:74868574-74868593 None:intergenic 30.0%
ATGAATAAAACCATTCTGGT+TGG + Chr1:74866676-74866695 MsG0180004209.01.T01:intron 30.0%
ATTTACAAATGGTCTCTATC+AGG - Chr1:74866591-74866610 None:intergenic 30.0%
CATAATAATAGGAATCACCT+TGG - Chr1:74868165-74868184 None:intergenic 30.0%
GATAGATGAGACAAATGATA+TGG + Chr1:74865377-74865396 MsG0180004209.01.T01:intron 30.0%
GATAGATGAGACAAATGATA+TGG - Chr1:74865396-74865377 None:intergenic 30.0%
GCTTATGAATAAAACCATTC+TGG + Chr1:74866672-74866691 MsG0180004209.01.T01:intron 30.0%
TACTTATAATTAAGGCCAGA+TGG - Chr1:74868440-74868459 None:intergenic 30.0%
TCATTTGTCTCATCTATCAT+AGG + Chr1:74865476-74865495 MsG0180004209.01.T01:intron 30.0%
TCATTTGTCTCATCTATCAT+AGG - Chr1:74865495-74865476 None:intergenic 30.0%
TGAAAAAATCAGTTACTACG+AGG + Chr1:74868350-74868369 MsG0180004209.01.T01:intron 30.0%
TGATTAAAAGTTACTCCATC+TGG + Chr1:74868422-74868441 MsG0180004209.01.T01:intron 30.0%
TTTGAGAATTCTTGTGAAGT+TGG + Chr1:74867684-74867703 MsG0180004209.01.T01:CDS 30.0%
! ATCTATTGTTCCATCTTTTC+TGG + Chr1:74869234-74869253 MsG0180004209.01.T01:intron 30.0%
! CAGATATTAACTTGGTTTCT+TGG + Chr1:74867540-74867559 MsG0180004209.01.T01:intron 30.0%
! TAATTGAGGGGTTATGATTT+TGG + Chr1:74868716-74868735 MsG0180004209.01.T01:intron 30.0%
! TATGATGTTAGACTGACTTA+AGG + Chr1:74869277-74869296 MsG0180004209.01.T01:intron 30.0%
! TCGTGTTTTCATGTTAAACA+CGG + Chr1:74869518-74869537 MsG0180004209.01.T01:intron 30.0%
!! ATCTGGCCTTAATTATAAGT+AGG + Chr1:74868439-74868458 MsG0180004209.01.T01:intron 30.0%
!! GTGTTTTTGTCAGTTTGTAT+GGG + Chr1:74866489-74866508 MsG0180004209.01.T01:intron 30.0%
!! TATCATTGGTTTCTTTGTCA+TGG + Chr1:74867482-74867501 MsG0180004209.01.T01:intron 30.0%
!! TTAATTCTAAAACAGAGGTG+TGG - Chr1:74865187-74865168 None:intergenic 30.0%
!!! AGTGCAACATTTTGAAACTT+AGG - Chr1:74866915-74866934 None:intergenic 30.0%
!!! GTATTTTCGTTAGTTTGTAC+AGG - Chr1:74866279-74866298 None:intergenic 30.0%
!!! GTGCAACATTTTGAAACTTA+GGG - Chr1:74866914-74866933 None:intergenic 30.0%
!!! TGCAACATTTTGAAACTTAG+GGG - Chr1:74866913-74866932 None:intergenic 30.0%
!!! TTATGATTTTGGAGCTACAT+TGG + Chr1:74868727-74868746 MsG0180004209.01.T01:intron 30.0%
!!! TTTTTTCCATCAAAGAAAGG+GGG + Chr1:74869156-74869175 MsG0180004209.01.T01:intron 30.0%
AATGTTGGTCGTCTTTGTAT+CGG + Chr1:74867935-74867954 MsG0180004209.01.T01:CDS 35.0%
ACATATTTCCCTTACGTTAG+GGG + Chr1:74867057-74867076 MsG0180004209.01.T01:intron 35.0%
ACGCTATTTAACACAACAGT+TGG - Chr1:74868238-74868257 None:intergenic 35.0%
ACTTACCAATGCCTATTGTT+TGG + Chr1:74867719-74867738 MsG0180004209.01.T01:CDS 35.0%
AGAAGAAAGATTATCTGCTC+TGG + Chr1:74869384-74869403 MsG0180004209.01.T01:CDS 35.0%
AGCCTTCCTTGCTAAATAAT+TGG - Chr1:74865054-74865073 None:intergenic 35.0%
AGGTGCTTTAATCAAATTGC+AGG - Chr1:74869033-74869052 None:intergenic 35.0%
ATAGTGACTTAAGTCACACT+AGG + Chr1:74866433-74866452 MsG0180004209.01.T01:intron 35.0%
ATGAGGAAATCTCTCTTTGA+TGG + Chr1:74870007-74870026 MsG0180004209.01.T01:CDS 35.0%
ATGGGAGAAGAGCAATTTAA+GGG - Chr1:74866241-74866260 None:intergenic 35.0%
ATTCATCAAGATAGTTGCAG+TGG - Chr1:74867823-74867842 None:intergenic 35.0%
ATTTCATATTGTAGGAGGTG+AGG - Chr1:74868695-74868714 None:intergenic 35.0%
CAATTGCAAGGAAATGAATG+AGG + Chr1:74865928-74865947 MsG0180004209.01.T01:intron 35.0%
CGCTATTTAACACAACAGTT+GGG - Chr1:74868237-74868256 None:intergenic 35.0%
CTATACATTAGCCACAGAAA+AGG - Chr1:74868973-74868992 None:intergenic 35.0%
CTATTTAACACAACAGTTGG+GGG - Chr1:74868235-74868254 None:intergenic 35.0%
CTCCAATTATTTAGCAAGGA+AGG + Chr1:74865049-74865068 MsG0180004209.01.T01:CDS 35.0%
GAAGAAAGATTATCTGCTCT+GGG + Chr1:74869385-74869404 MsG0180004209.01.T01:CDS 35.0%
GCTATTTAACACAACAGTTG+GGG - Chr1:74868236-74868255 None:intergenic 35.0%
GGTGCTTTAATCAAATTGCA+GGG - Chr1:74869032-74869051 None:intergenic 35.0%
GTAGCTCTTAAGAACTTCTT+TGG + Chr1:74865699-74865718 MsG0180004209.01.T01:intron 35.0%
GTTGCTGGTAATATTCTTGT+CGG + Chr1:74869647-74869666 MsG0180004209.01.T01:CDS 35.0%
TAGTGTGACTTAAGTCACTA+TGG - Chr1:74866434-74866453 None:intergenic 35.0%
TAGTTCATCCAAGTCTTCAA+TGG - Chr1:74869801-74869820 None:intergenic 35.0%
TATACAATGGCAGAAAGTTG+AGG - Chr1:74868277-74868296 None:intergenic 35.0%
TATTTAACACAACAGTTGGG+GGG - Chr1:74868234-74868253 None:intergenic 35.0%
TCATACTTCCATTGAAGACT+TGG + Chr1:74869790-74869809 MsG0180004209.01.T01:CDS 35.0%
TGAGTGAATAAAGTCACTCT+AGG + Chr1:74866325-74866344 MsG0180004209.01.T01:intron 35.0%
TGAGTGAGTTAAGTTACTCT+GGG - Chr1:74866402-74866421 None:intergenic 35.0%
TGATACATACAGTGCATTTG+AGG + Chr1:74867859-74867878 MsG0180004209.01.T01:intron 35.0%
TGCTTACATGTTGAGAAAGA+AGG - Chr1:74865840-74865859 None:intergenic 35.0%
TTCCTCATATATGGCATACT+GGG + Chr1:74869208-74869227 MsG0180004209.01.T01:intron 35.0%
TTTCCTCATATATGGCATAC+TGG + Chr1:74869207-74869226 MsG0180004209.01.T01:intron 35.0%
TTTGACCAATCACTTAATCC+AGG + Chr1:74869760-74869779 MsG0180004209.01.T01:intron 35.0%
! AAGTCTTCAATGGAAGTATG+AGG - Chr1:74869791-74869810 None:intergenic 35.0%
! AGTCTTCAATGGAAGTATGA+GGG - Chr1:74869790-74869809 None:intergenic 35.0%
! CTTTTATCAATCAACACCCT+AGG + Chr1:74869058-74869077 MsG0180004209.01.T01:intron 35.0%
! GAAATTTTCAGAACCTCCAA+TGG - Chr1:74867748-74867767 None:intergenic 35.0%
! GTTTTTGTCACCAGAAAAGA+TGG - Chr1:74869247-74869266 None:intergenic 35.0%
! TCATTCATGTTTTGTAGTGG+AGG + Chr1:74868393-74868412 MsG0180004209.01.T01:intron 35.0%
! TGCTCATTCATGTTTTGTAG+TGG + Chr1:74868390-74868409 MsG0180004209.01.T01:intron 35.0%
! TTTACTGTGCTATTAAACCG+AGG + Chr1:74869580-74869599 MsG0180004209.01.T01:intron 35.0%
! TTTTGTCAGTTTGTATGGGA+GGG + Chr1:74866493-74866512 MsG0180004209.01.T01:intron 35.0%
! TTTTTGTCAGTTTGTATGGG+AGG + Chr1:74866492-74866511 MsG0180004209.01.T01:intron 35.0%
!! CAATGGAAGTTTTGATCACA+GGG - Chr1:74867904-74867923 None:intergenic 35.0%
!! CATACTTACTATTGGTTTGC+AGG + Chr1:74868100-74868119 MsG0180004209.01.T01:intron 35.0%
!! GAGGTTCTGAAAATTTCTAC+AGG + Chr1:74867751-74867770 MsG0180004209.01.T01:CDS 35.0%
!! GGTGTTTTTGTCAGTTTGTA+TGG + Chr1:74866488-74866507 MsG0180004209.01.T01:intron 35.0%
!! TTTCGTTAGTTTGTACAGGA+GGG - Chr1:74866275-74866294 None:intergenic 35.0%
!!! AATGTTTTAGCCCGTGATTT+TGG + Chr1:74868532-74868551 MsG0180004209.01.T01:intron 35.0%
!!! ATGTTTTAGCCCGTGATTTT+GGG + Chr1:74868533-74868552 MsG0180004209.01.T01:intron 35.0%
!!! GCAACATTTTAAAACTTGGG+AGG + Chr1:74867186-74867205 MsG0180004209.01.T01:intron 35.0%
!!! GCAACATTTTGAAACTTAGG+GGG - Chr1:74866912-74866931 None:intergenic 35.0%
!!! TGAAAGTGTTTTCAAGCTGA+GGG + Chr1:74869955-74869974 MsG0180004209.01.T01:CDS 35.0%
!!! TTGAAAGTGTTTTCAAGCTG+AGG + Chr1:74869954-74869973 MsG0180004209.01.T01:CDS 35.0%
!!! TTTTCGTTAGTTTGTACAGG+AGG - Chr1:74866276-74866295 None:intergenic 35.0%
AAATCCAAAGCCAACCAGAA+TGG - Chr1:74866689-74866708 None:intergenic 40.0%
AACATTACGAGTACCACCAA+TGG - Chr1:74867921-74867940 None:intergenic 40.0%
AAGCTTATATGGCAGAGTCT+AGG + Chr1:74868903-74868922 MsG0180004209.01.T01:intron 40.0%
ACACCACATGTCCCAAAAAA+GGG + Chr1:74866996-74867015 MsG0180004209.01.T01:intron 40.0%
ACATCAGAAAAGACCTGCAA+TGG - Chr1:74868940-74868959 None:intergenic 40.0%
ACGGATGCTGTATAAAGAAG+TGG + Chr1:74869537-74869556 MsG0180004209.01.T01:intron 40.0%
ACTTACCAAACCACCTTTGT+TGG - Chr1:74869690-74869709 None:intergenic 40.0%
AGCTTATATGGCAGAGTCTA+GGG + Chr1:74868904-74868923 MsG0180004209.01.T01:intron 40.0%
AGTGTCTGAACCACAAAATG+CGG - Chr1:74869912-74869931 None:intergenic 40.0%
CAAAGGAACTTGAAGAAGTG+TGG - Chr1:74869825-74869844 None:intergenic 40.0%
CAAAGTGATTAAACTCACGC+AGG + Chr1:74866370-74866389 MsG0180004209.01.T01:intron 40.0%
CAGAGTAACTTAACTCACTC+AGG + Chr1:74866401-74866420 MsG0180004209.01.T01:intron 40.0%
CATATTTCCCTTACGTTAGG+GGG + Chr1:74867058-74867077 MsG0180004209.01.T01:intron 40.0%
CATCAGAAAAGACCTGCAAT+GGG - Chr1:74868939-74868958 None:intergenic 40.0%
CATGCAGAAAATGGTTGTGT+CGG - Chr1:74867370-74867389 None:intergenic 40.0%
CCTGTGATCAAAACTTCCAT+TGG + Chr1:74867902-74867921 MsG0180004209.01.T01:CDS 40.0%
CGGATGCTGTATAAAGAAGT+GGG + Chr1:74869538-74869557 MsG0180004209.01.T01:intron 40.0%
CTGAGTGAGTTAAGTTACTC+TGG - Chr1:74866403-74866422 None:intergenic 40.0%
CTGGCATGACAGTAAATGAT+TGG + Chr1:74869885-74869904 MsG0180004209.01.T01:CDS 40.0%
GATGGGAGAAGAGCAATTTA+AGG - Chr1:74866242-74866261 None:intergenic 40.0%
GGACACTATTCAAGAAACCA+AGG - Chr1:74867974-74867993 None:intergenic 40.0%
GGTTTGCAGGAAACAAGAAT+GGG + Chr1:74868113-74868132 MsG0180004209.01.T01:intron 40.0%
GTAGCTCTTAAGAACTCGTT+TGG - Chr1:74865210-74865229 None:intergenic 40.0%
GTGAACCTGGATTAAGTGAT+TGG - Chr1:74869768-74869787 None:intergenic 40.0%
GTGATCAAAACTTCCATTGG+TGG + Chr1:74867905-74867924 MsG0180004209.01.T01:CDS 40.0%
TACTGCACTTTCTCCAACAA+AGG + Chr1:74869674-74869693 MsG0180004209.01.T01:CDS 40.0%
TATAGCGTGTAATGACCATG+TGG + Chr1:74869414-74869433 MsG0180004209.01.T01:CDS 40.0%
TATTGTTTGGTTGCCATTGG+AGG + Chr1:74867732-74867751 MsG0180004209.01.T01:CDS 40.0%
TCAGCAATGTTTGGACGAAA+GGG - Chr1:74866972-74866991 None:intergenic 40.0%
TCCAATGGCAACCAAACAAT+AGG - Chr1:74867733-74867752 None:intergenic 40.0%
TGGGAGAAGAGCAATTTAAG+GGG - Chr1:74866240-74866259 None:intergenic 40.0%
TTAAGACCCCCTTTCTTTGA+TGG - Chr1:74869165-74869184 None:intergenic 40.0%
TTCCTTGCAATTGCATTGCA+AGG - Chr1:74865921-74865940 None:intergenic 40.0%
TTTCCTCATCTCATCCACAA+TGG - Chr1:74869996-74870015 None:intergenic 40.0%
TTTCTCCAACAAAGGTGGTT+TGG + Chr1:74869682-74869701 MsG0180004209.01.T01:CDS 40.0%
! AAAGAAGGCTCTCTTTGAGA+AGG + Chr1:74865088-74865107 MsG0180004209.01.T01:CDS 40.0%
! AAAGAAGGCTCTCTTTGAGA+AGG - Chr1:74865107-74865088 None:intergenic 40.0%
! AAGATGTGACGTGTTGTTAG+AGG - Chr1:74866557-74866576 None:intergenic 40.0%
! AATGATTGGACCGCATTTTG+TGG + Chr1:74869899-74869918 MsG0180004209.01.T01:CDS 40.0%
! ATTGGTGGTACTCGTAATGT+TGG + Chr1:74867920-74867939 MsG0180004209.01.T01:CDS 40.0%
! CACACTTCTTCAAGTTCCTT+TGG + Chr1:74869823-74869842 MsG0180004209.01.T01:CDS 40.0%
! CGTGTTGTTAGAGGTGTAAA+AGG - Chr1:74866548-74866567 None:intergenic 40.0%
! TACGATGAGAACCTTTTCTG+TGG + Chr1:74868959-74868978 MsG0180004209.01.T01:intron 40.0%
! TGGTTTGCAGGAAACAAGAA+TGG + Chr1:74868112-74868131 MsG0180004209.01.T01:intron 40.0%
! TTCAAGTTCCTTTGGTTGCT+GGG + Chr1:74869831-74869850 MsG0180004209.01.T01:CDS 40.0%
!! AAAACCATTCTGGTTGGCTT+TGG + Chr1:74866682-74866701 MsG0180004209.01.T01:intron 40.0%
!! CCAATGGAAGTTTTGATCAC+AGG - Chr1:74867905-74867924 None:intergenic 40.0%
AAAACTTGGGAGGCGAAAAC+TGG + Chr1:74867196-74867215 MsG0180004209.01.T01:intron 45.0%
ATAGGAATCACCTTGGTCTG+TGG - Chr1:74868158-74868177 None:intergenic 45.0%
CACCACATGTCCCAAAAAAG+GGG + Chr1:74866997-74867016 MsG0180004209.01.T01:intron 45.0%
CACTCTAGGTTACAACCTGA+GGG + Chr1:74866339-74866358 MsG0180004209.01.T01:intron 45.0%
CAGCAATGTTTGGACGAAAG+GGG - Chr1:74866971-74866990 None:intergenic 45.0%
CAGCTATTACTTCGCTACCA+CGG - Chr1:74869865-74869884 None:intergenic 45.0%
CTCAGCAATGTTTGGACGAA+AGG - Chr1:74866973-74866992 None:intergenic 45.0%
GACACCACATGTCCCAAAAA+AGG + Chr1:74866995-74867014 MsG0180004209.01.T01:intron 45.0%
GCCTATTGTTTGGTTGCCAT+TGG + Chr1:74867729-74867748 MsG0180004209.01.T01:CDS 45.0%
GGCAACCAAACAATAGGCAT+TGG - Chr1:74867727-74867746 None:intergenic 45.0%
GGGAGAAGAGCAATTTAAGG+GGG - Chr1:74866239-74866258 None:intergenic 45.0%
GGTGTCTTCTCAGCAATGTT+TGG - Chr1:74866981-74867000 None:intergenic 45.0%
TATATGGCAGAGTCTAGGGA+AGG + Chr1:74868908-74868927 MsG0180004209.01.T01:intron 45.0%
TCACTCTAGGTTACAACCTG+AGG + Chr1:74866338-74866357 MsG0180004209.01.T01:intron 45.0%
TGAGGACGCTAATGACGAAA+AGG - Chr1:74868677-74868696 None:intergenic 45.0%
TGCACTTTCTCCAACAAAGG+TGG + Chr1:74869677-74869696 MsG0180004209.01.T01:CDS 45.0%
TGCCCAGTATGCCATATATG+AGG - Chr1:74869213-74869232 None:intergenic 45.0%
! ACTGTGCTATTAAACCGAGG+AGG + Chr1:74869583-74869602 MsG0180004209.01.T01:intron 45.0%
! CACTTTGAGTTACAACCCTC+AGG - Chr1:74866357-74866376 None:intergenic 45.0%
! CTTCAAGTTCCTTTGGTTGC+TGG + Chr1:74869830-74869849 MsG0180004209.01.T01:CDS 45.0%
! CTTTTGACCCCCTAACGTAA+GGG - Chr1:74867068-74867087 None:intergenic 45.0%
! GTTTTCAGACAGACAGTTGC+TGG + Chr1:74869632-74869651 MsG0180004209.01.T01:CDS 45.0%
! TCTTTTGACCCCCTAACGTA+AGG - Chr1:74867069-74867088 None:intergenic 45.0%
! TGTATGGGAGGGAGCAATTT+TGG + Chr1:74866504-74866523 MsG0180004209.01.T01:intron 45.0%
!! AAATGGTTGTGTCGGTTACC+AGG - Chr1:74867362-74867381 None:intergenic 45.0%
!!! GCGACTATGACCCCTTTTTT+GGG - Chr1:74867010-74867029 None:intergenic 45.0%
!!! TGCGACTATGACCCCTTTTT+TGG - Chr1:74867011-74867030 None:intergenic 45.0%
!!! TTTGTAATTTAATTTTTTTT+GGG - Chr1:74867229-74867248 None:intergenic 5.0%
!!! TTTTATTATATTTAAATTCT+TGG + Chr1:74866869-74866888 MsG0180004209.01.T01:intron 5.0%
!!! TTTTGTAATTTAATTTTTTT+TGG - Chr1:74867230-74867249 None:intergenic 5.0%
AACATCTGCAACCACCTCCT+CGG - Chr1:74869600-74869619 None:intergenic 50.0%
AAGCGGTGGATGGAATGGAA+TGG - Chr1:74867322-74867341 None:intergenic 50.0%
ACCTTGGTCTGTGGTGGTAT+GGG - Chr1:74868149-74868168 None:intergenic 50.0%
AGAGAGGAGCAAAGAGGAAG+CGG - Chr1:74867339-74867358 None:intergenic 50.0%
AGCCTTCTTTCTCCGCATGT+AGG - Chr1:74865078-74865097 None:intergenic 50.0%
AGGAGGGAGCAATTGTGGAT+GGG - Chr1:74866259-74866278 None:intergenic 50.0%
AGTTGTAACCCAGAGTCACG+TGG - Chr1:74866305-74866324 None:intergenic 50.0%
CACACACACTGATCTCGACA+AGG + Chr1:74869441-74869460 MsG0180004209.01.T01:CDS 50.0%
CGACTGTTACCCGTGAATCA+CGG + Chr1:74868847-74868866 MsG0180004209.01.T01:intron 50.0%
CTGCGAGACTTAAGTCACGT+GGG + Chr1:74866464-74866483 MsG0180004209.01.T01:intron 50.0%
GACTGTTACCCGTGAATCAC+GGG + Chr1:74868848-74868867 MsG0180004209.01.T01:intron 50.0%
GAGGTGGTTGCAGATGTTCT+TGG + Chr1:74869602-74869621 MsG0180004209.01.T01:CDS 50.0%
GAGGTGTGACCAGATCTAGA+GGG + Chr1:74865182-74865201 MsG0180004209.01.T01:intron 50.0%
GATGGAATGGAATGGAGGGA+CGG - Chr1:74867314-74867333 None:intergenic 50.0%
GCAATTGCATTGCAAGGCCA+TGG - Chr1:74865915-74865934 None:intergenic 50.0%
GGCCTTGCAATGCAATTGCA+AGG + Chr1:74865916-74865935 MsG0180004209.01.T01:intron 50.0%
GGTAGCGAAGTAATAGCTGC+TGG + Chr1:74869866-74869885 MsG0180004209.01.T01:CDS 50.0%
GGTGGATGGAATGGAATGGA+GGG - Chr1:74867318-74867337 None:intergenic 50.0%
GTCGAGATCAGTGTGTGTGA+GGG - Chr1:74869440-74869459 None:intergenic 50.0%
GTTGTAACCCAGAGTCACGT+GGG - Chr1:74866304-74866323 None:intergenic 50.0%
TCAATCAACACCCTAGGTGC+TGG + Chr1:74869064-74869083 MsG0180004209.01.T01:intron 50.0%
TCTGCGAGACTTAAGTCACG+TGG + Chr1:74866463-74866482 MsG0180004209.01.T01:intron 50.0%
TGCCTACATGCGGAGAAAGA+AGG + Chr1:74865073-74865092 MsG0180004209.01.T01:CDS 50.0%
TGCGAGACTTAAGTCACGTG+GGG + Chr1:74866465-74866484 MsG0180004209.01.T01:intron 50.0%
TGTACAGGAGGGAGCAATTG+TGG - Chr1:74866264-74866283 None:intergenic 50.0%
TGTCGAGATCAGTGTGTGTG+AGG - Chr1:74869441-74869460 None:intergenic 50.0%
TGTGGCCAGATCTAGCTAGA+GGG - Chr1:74865727-74865746 None:intergenic 50.0%
TTCACAGTCCCAGCAACCAA+AGG - Chr1:74869842-74869861 None:intergenic 50.0%
TTGTAACCCAGAGTCACGTG+GGG - Chr1:74866303-74866322 None:intergenic 50.0%
TTTCAAGCTGAGGGAAGCCA+AGG + Chr1:74869964-74869983 MsG0180004209.01.T01:CDS 50.0%
TTTCGCCATACTCCTAGCCA+TGG + Chr1:74865895-74865914 MsG0180004209.01.T01:intron 50.0%
! AGAGGTGTGACCAGATCTAG+AGG + Chr1:74865181-74865200 MsG0180004209.01.T01:intron 50.0%
! ATCCACAATGGCACTAGCCT+TGG - Chr1:74869984-74870003 None:intergenic 50.0%
! GGGAGGGAGCAATTTTGGAT+GGG + Chr1:74866509-74866528 MsG0180004209.01.T01:intron 50.0%
! GTGCCATTGTGGATGAGATG+AGG + Chr1:74869990-74870009 MsG0180004209.01.T01:CDS 50.0%
! GTGCTATTAAACCGAGGAGG+TGG + Chr1:74869586-74869605 MsG0180004209.01.T01:intron 50.0%
! TGGAAGTATGAGGGTGAACC+TGG - Chr1:74869781-74869800 None:intergenic 50.0%
! TGGGAGGGAGCAATTTTGGA+TGG + Chr1:74866508-74866527 MsG0180004209.01.T01:intron 50.0%
!!! GACCCCTTTTTTGGGACATG+TGG - Chr1:74867002-74867021 None:intergenic 50.0%
AAATACCCCCCACGTGACTC+TGG + Chr1:74866293-74866312 MsG0180004209.01.T01:intron 55.0%
AATACCCCCCACGTGACTCT+GGG + Chr1:74866294-74866313 MsG0180004209.01.T01:intron 55.0%
ACCAGGAGAGAGGAGCAAAG+AGG - Chr1:74867345-74867364 None:intergenic 55.0%
AGAGGAAGCGGTGGATGGAA+TGG - Chr1:74867327-74867346 None:intergenic 55.0%
AGCAAAGAGGAAGCGGTGGA+TGG - Chr1:74867332-74867351 None:intergenic 55.0%
CAAACCTCAGCCAGCACCTA+GGG - Chr1:74869077-74869096 None:intergenic 55.0%
CAAGGAAGGCTGCCTACATG+CGG + Chr1:74865063-74865082 MsG0180004209.01.T01:CDS 55.0%
CAAGGCCATGGCTAGGAGTA+TGG - Chr1:74865903-74865922 None:intergenic 55.0%
CACCTTGGTCTGTGGTGGTA+TGG - Chr1:74868150-74868169 None:intergenic 55.0%
CAGGAGGGAGCAATTGTGGA+TGG - Chr1:74866260-74866279 None:intergenic 55.0%
CCTTGGTCTGTGGTGGTATG+GGG - Chr1:74868148-74868167 None:intergenic 55.0%
CGAGACTTAAGTCACGTGGG+GGG + Chr1:74866467-74866486 MsG0180004209.01.T01:intron 55.0%
CGCTGAACACGAACTCGATC+AGG - Chr1:74869361-74869380 None:intergenic 55.0%
CGGTGGATGGAATGGAATGG+AGG - Chr1:74867319-74867338 None:intergenic 55.0%
GCGAGACTTAAGTCACGTGG+GGG + Chr1:74866466-74866485 MsG0180004209.01.T01:intron 55.0%
GGAATCACCTTGGTCTGTGG+TGG - Chr1:74868155-74868174 None:intergenic 55.0%
GGGAAGGTTGAACCCATTGC+AGG + Chr1:74868924-74868943 MsG0180004209.01.T01:intron 55.0%
GTGTGGCCAGATCTAGCTAG+AGG - Chr1:74865728-74865747 None:intergenic 55.0%
TCAAACCTCAGCCAGCACCT+AGG - Chr1:74869078-74869097 None:intergenic 55.0%
TCATCACGGCCCGTGATTCA+CGG - Chr1:74868860-74868879 None:intergenic 55.0%
TCCTCTTTGCTCCTCTCTCC+TGG + Chr1:74867341-74867360 MsG0180004209.01.T01:intron 55.0%
TGCATTGCAAGGCCATGGCT+AGG - Chr1:74865910-74865929 None:intergenic 55.0%
TGGCTCCCTCTAGCTAGATC+TGG + Chr1:74865719-74865738 MsG0180004209.01.T01:intron 55.0%
TGTAACCCAGAGTCACGTGG+GGG - Chr1:74866302-74866321 None:intergenic 55.0%
! AGCCAAGGCTAGTGCCATTG+TGG + Chr1:74869979-74869998 MsG0180004209.01.T01:CDS 55.0%
! CGTTTGGCTCCCTCTAGATC+TGG - Chr1:74865194-74865213 None:intergenic 55.0%
!! TGTGTCGGTTACCAGGAGAG+AGG - Chr1:74867355-74867374 None:intergenic 55.0%
CAGTGTGTGTGAGGGCCACA+TGG - Chr1:74869432-74869451 None:intergenic 60.0%
CATCACGGCCCGTGATTCAC+GGG - Chr1:74868859-74868878 None:intergenic 60.0%
CCCCATACCACCACAGACCA+AGG + Chr1:74868145-74868164 MsG0180004209.01.T01:intron 60.0%
GAGGAGCAAAGAGGAAGCGG+TGG - Chr1:74867336-74867355 None:intergenic 60.0%
GTAACCCAGAGTCACGTGGG+GGG - Chr1:74866301-74866320 None:intergenic 60.0%
GTTGCTGGGACTGTGAACCG+TGG + Chr1:74869845-74869864 MsG0180004209.01.T01:CDS 60.0%
!! AACACCCTAGGTGCTGGCTG+AGG + Chr1:74869070-74869089 MsG0180004209.01.T01:intron 60.0%
Chromosome Type Strat End Strand Name
Chr1 gene 74865017 74870039 74865017 ID=MsG0180004209.01;Name=MsG0180004209.01
Chr1 mRNA 74865017 74870039 74865017 ID=MsG0180004209.01.T01;Parent=MsG0180004209.01;Name=MsG0180004209.01.T01;_AED=0.41;_eAED=0.41;_QI=0|0|0|1|1|1|6|0|277
Chr1 exon 74865017 74865184 74865017 ID=MsG0180004209.01.T01:exon:31684;Parent=MsG0180004209.01.T01
Chr1 exon 74867684 74867772 74867684 ID=MsG0180004209.01.T01:exon:31685;Parent=MsG0180004209.01.T01
Chr1 exon 74867871 74867956 74867871 ID=MsG0180004209.01.T01:exon:31686;Parent=MsG0180004209.01.T01
Chr1 exon 74869332 74869462 74869332 ID=MsG0180004209.01.T01:exon:31687;Parent=MsG0180004209.01.T01
Chr1 exon 74869602 74869703 74869602 ID=MsG0180004209.01.T01:exon:31688;Parent=MsG0180004209.01.T01
Chr1 exon 74869782 74870039 74869782 ID=MsG0180004209.01.T01:exon:31689;Parent=MsG0180004209.01.T01
Chr1 CDS 74865017 74865184 74865017 ID=MsG0180004209.01.T01:cds;Parent=MsG0180004209.01.T01
Chr1 CDS 74867684 74867772 74867684 ID=MsG0180004209.01.T01:cds;Parent=MsG0180004209.01.T01
Chr1 CDS 74867871 74867956 74867871 ID=MsG0180004209.01.T01:cds;Parent=MsG0180004209.01.T01
Chr1 CDS 74869332 74869462 74869332 ID=MsG0180004209.01.T01:cds;Parent=MsG0180004209.01.T01
Chr1 CDS 74869602 74869703 74869602 ID=MsG0180004209.01.T01:cds;Parent=MsG0180004209.01.T01
Chr1 CDS 74869782 74870039 74869782 ID=MsG0180004209.01.T01:cds;Parent=MsG0180004209.01.T01
Gene Sequence

>MsG0180004209.01.T01

ATGGCTAGGAGTAGGGTGAAACTTGCCTTTATCTCCAATTATTTAGCAAGGAAGGCTGCCTACATGCGGAGAAAGAAGGCTCTCTTTGAGAAGGTGAGAGAACTCAATATTCTTTATGGTATTTCAGCATGTGTTCTAATTTCTAATCCTTTTAATTCTAAAACAGAGTTTGAGAATTCTTGTGAAGTTGGAGTATTCTCAAAACTTACCAATGCCTATTGTTTGGTTGCCATTGGAGGTTCTGAAAATTTCTACAGTGCATTTGAGGCTGAGTTATCAGATGTTATCCCTGTGATCAAAACTTCCATTGGTGGTACTCGTAATGTTGGTCGTCTTTGTATCGAACTTCAACATTTAAGAAACAGTCTACCTGATCGAGTTCGTGTTCAGCGCATAGAAGAAAGATTATCTGCTCTGGGAAACTGTATAGCGTGTAATGACCATGTGGCCCTCACACACACTGATCTCGACAAGGAGGTGGTTGCAGATGTTCTTGGAGTAGAAGTTTTCAGACAGACAGTTGCTGGTAATATTCTTGTCGGCAGTTACTGCACTTTCTCCAACAAAGGTGGTTTGGTTCACCCTCATACTTCCATTGAAGACTTGGATGAACTATCCACACTTCTTCAAGTTCCTTTGGTTGCTGGGACTGTGAACCGTGGTAGCGAAGTAATAGCTGCTGGCATGACAGTAAATGATTGGACCGCATTTTGTGGTTCAGACACTACAGCAACAGAACTCTCAGTGATTGAAAGTGTTTTCAAGCTGAGGGAAGCCAAGGCTAGTGCCATTGTGGATGAGATGAGGAAATCTCTCTTTGATGGCTATAACTGA
Protein sequence

>MsG0180004209.01.T01

MARSRVKLAFISNYLARKAAYMRRKKALFEKVRELNILYGISACVLISNPFNSKTEFENSCEVGVFSKLTNAYCLVAIGGSENFYSAFEAELSDVIPVIKTSIGGTRNVGRLCIELQHLRNSLPDRVRVQRIEERLSALGNCIACNDHVALTHTDLDKEVVADVLGVEVFRQTVAGNILVGSYCTFSNKGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGMTVNDWTAFCGSDTTATELSVIESVFKLREAKASAIVDEMRKSLFDGYN*