AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180004329.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180004329.01.T01 MTR_1g077040 95.372 497 23 0 1 497 1 497 0.0 912
MsG0180004329.01.T01 MTR_1g077040 95.161 372 18 0 126 497 43 414 0.0 652
MsG0180004329.01.T01 MTR_3g082690 22.368 380 232 10 8 381 69 391 1.62e-15 79.3
MsG0180004329.01.T01 MTR_4g082305 30.303 198 124 6 6 197 55 244 9.36e-14 72.8
MsG0180004329.01.T01 MTR_4g082305 30.303 198 124 6 6 197 55 244 1.25e-13 73.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180004329.01.T01 AT3G56570 54.494 534 200 8 1 495 1 530 0.0 534
MsG0180004329.01.T01 AT3G56570 54.393 535 200 9 1 495 1 531 0.0 530
MsG0180004329.01.T01 AT3G07670 21.932 383 230 12 8 381 76 398 2.09e-11 66.6
MsG0180004329.01.T01 AT1G14030 27.638 199 128 6 6 197 49 238 4.15e-11 65.5

Find 105 sgRNAs with CRISPR-Local

Find 282 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTAACGGATATTCCTTCTTC+TGG 0.208879 1:+76459909 None:intergenic
CTACTGATACGTCTAATTTA+TGG 0.220381 1:+76455898 None:intergenic
ATTTAATACTTACGGGATAT+TGG 0.228032 1:-76456186 MsG0180004329.01.T01:CDS
TGCTTGTTTGGGTGGCTATT+TGG 0.237161 1:-76459787 MsG0180004329.01.T01:CDS
ATTGTAACACAAGCTTTCTT+TGG 0.275451 1:+76459843 None:intergenic
ATAGATGATTACCATGGTTT+TGG 0.280289 1:-76458607 MsG0180004329.01.T01:CDS
GATTTCACACAATGCTTTAA+CGG 0.292015 1:+76459893 None:intergenic
GCTTGTTTGGGTGGCTATTT+GGG 0.296514 1:-76459786 MsG0180004329.01.T01:CDS
CAAAGCATCACAAACTTCTT+TGG 0.300506 1:+76455773 None:intergenic
GATCATTGAAAATGCTTGTT+TGG 0.302331 1:-76459799 MsG0180004329.01.T01:CDS
AAGCTTAACCCGGAATTCTT+TGG 0.317812 1:-76458682 MsG0180004329.01.T01:CDS
TGATATTGTGAACATTGATT+TGG 0.318688 1:-76456111 MsG0180004329.01.T01:CDS
GCCGCTTTGCTACATAGATA+TGG 0.324543 1:-76456158 MsG0180004329.01.T01:CDS
TCGAGAAGAAATAAGACTTT+TGG 0.326128 1:+76458639 None:intergenic
TTTAATACTTACGGGATATT+GGG 0.328807 1:-76456185 MsG0180004329.01.T01:CDS
TAACGGATATTCCTTCTTCT+GGG 0.338446 1:+76459910 None:intergenic
TATTATGTATGAGAGGAGTT+TGG 0.353787 1:-76459751 MsG0180004329.01.T01:CDS
ACATTGGTGCATTGATTCAT+TGG 0.358790 1:-76455442 MsG0180004329.01.T01:three_prime_UTR
TACAGGTATTTAATACTTAC+GGG 0.360220 1:-76456193 MsG0180004329.01.T01:intron
ATATGATGTATAATAAAATA+AGG 0.361591 1:+76455940 None:intergenic
TGTTCCACACCAAAGAATTC+CGG 0.362959 1:+76458673 None:intergenic
ACTAGCTCAAAATTCCTCTT+TGG 0.365519 1:-76456562 MsG0180004329.01.T01:CDS
AGGAATGTTTGCCTTTGGTT+TGG 0.382903 1:-76459683 MsG0180004329.01.T01:CDS
TATTTCGAGATATCATTTGA+TGG 0.393572 1:-76455981 MsG0180004329.01.T01:CDS
ATACAGGTATTTAATACTTA+CGG 0.399560 1:-76456194 MsG0180004329.01.T01:intron
TCCAGCTTCAATCATAAAAC+TGG 0.401168 1:-76456669 MsG0180004329.01.T01:intron
TTGTGATGCTTTGTTGTCAC+TGG 0.403340 1:-76455763 MsG0180004329.01.T01:CDS
TTTGGGTGAGGAGTCTCCTT+GGG 0.404018 1:-76459733 MsG0180004329.01.T01:CDS
TCAACAGGAATGTTTGCCTT+TGG 0.405923 1:-76459688 MsG0180004329.01.T01:CDS
TTGAAGGTTCTGAATCCAAC+AGG 0.407785 1:+76458704 None:intergenic
GTGTGGTACTGAGCTTCATC+AGG 0.410493 1:-76459634 MsG0180004329.01.T01:intron
ATCATTGAAAATGCTTGTTT+GGG 0.415652 1:-76459798 MsG0180004329.01.T01:CDS
GTTTGGGTGAGGAGTCTCCT+TGG 0.425068 1:-76459734 MsG0180004329.01.T01:CDS
AATTCCGGGTTAAGCTTTGA+AGG 0.427673 1:+76458688 None:intergenic
GTCTCCCTTTGGAGAAGGTT+AGG 0.432291 1:-76456032 MsG0180004329.01.T01:CDS
GATATGAGGGAGAGTCTCTA+TGG 0.435839 1:-76455738 MsG0180004329.01.T01:CDS
TGTTGTCACTGGCTGATATG+AGG 0.437422 1:-76455752 MsG0180004329.01.T01:CDS
GACGTATCAGTAGCAGTTGC+TGG 0.438103 1:-76455888 MsG0180004329.01.T01:CDS
GTTCCACACCAAAGAATTCC+GGG 0.439461 1:+76458674 None:intergenic
ATCAATGTTCACAATATCAT+AGG 0.441709 1:+76456115 None:intergenic
GGTGAGGAGTCTCCTTGGGC+TGG 0.445832 1:-76459729 MsG0180004329.01.T01:CDS
TGGAAAGCTGTATCATTCTT+CGG 0.452010 1:-76455658 MsG0180004329.01.T01:CDS
GTATGAGAGGAGTTTGGGTG+AGG 0.461310 1:-76459745 MsG0180004329.01.T01:CDS
ATTATGTATGAGAGGAGTTT+GGG 0.471089 1:-76459750 MsG0180004329.01.T01:CDS
TCTTGATCTGCTGTGGCGGT+TGG 0.477152 1:+76456055 None:intergenic
TGTGAACATTGATTTGGAAC+TGG 0.477397 1:-76456105 MsG0180004329.01.T01:CDS
AGAGAATATTCTACCCCTGT+TGG 0.478060 1:-76458719 MsG0180004329.01.T01:CDS
GCAGATCAAGAGTCTCCCTT+TGG 0.480598 1:-76456043 MsG0180004329.01.T01:CDS
GAGCAACACATTGCAATTTG+TGG 0.492207 1:-76459937 MsG0180004329.01.T01:CDS
TCTTTGGATAAAACTGAGAA+AGG 0.499954 1:-76456546 MsG0180004329.01.T01:CDS
AATTTATGGTAAACATCATC+CGG 0.501826 1:+76455912 None:intergenic
AGACAAAGCTCTTGTCTATG+AGG 0.503563 1:-76458749 MsG0180004329.01.T01:CDS
CTGCTAGGAAGAAGTTGAAA+AGG 0.505819 1:-76455554 MsG0180004329.01.T01:CDS
TCTCTGTGGCAATGGCCACC+AGG 0.510589 1:-76460101 MsG0180004329.01.T01:intron
TTTATGATTTATTTATACAT+TGG 0.522187 1:-76455458 MsG0180004329.01.T01:three_prime_UTR
GTTGCTCCATTCGAATCCAT+TGG 0.527285 1:+76459953 None:intergenic
GCTCAGTACCACACAAAAGC+TGG 0.530815 1:+76459643 None:intergenic
TGAGGATGATACTTCAATGC+TGG 0.532383 1:-76456490 MsG0180004329.01.T01:CDS
AAGCTCTTGTCTATGAGGAC+TGG 0.532918 1:-76458744 MsG0180004329.01.T01:CDS
ATAGCCTAACCTTCTCCAAA+GGG 0.535931 1:+76456028 None:intergenic
TAATATAACAAAACAATGCA+TGG 0.536030 1:+76455350 None:intergenic
GATCAAAATTCAAACAGTAC+AGG 0.536088 1:+76455385 None:intergenic
CAAGAGTCTCCCTTTGGAGA+AGG 0.539649 1:-76456037 MsG0180004329.01.T01:CDS
TTTGTGGACACCCCAGAAGA+AGG 0.540799 1:-76459921 MsG0180004329.01.T01:CDS
GTTGTCACTGGCTGATATGA+GGG 0.545553 1:-76455751 MsG0180004329.01.T01:CDS
GCTTCACTTACAGATCTGCC+AGG 0.550005 1:+76458575 None:intergenic
TGATACTTCAATGCTGGAGA+TGG 0.557586 1:-76456484 MsG0180004329.01.T01:CDS
AACGGATATTCCTTCTTCTG+GGG 0.559930 1:+76459911 None:intergenic
ATTGAAAATGCTTGTTTGGG+TGG 0.562661 1:-76459795 MsG0180004329.01.T01:CDS
TAACCCGGAATTCTTTGGTG+TGG 0.569437 1:-76458677 MsG0180004329.01.T01:CDS
GTTTACGTGCATTCAAGCGA+TGG 0.570568 1:-76459983 MsG0180004329.01.T01:CDS
GTCTTCTAACAACGAATCTG+AGG 0.572955 1:-76456619 MsG0180004329.01.T01:CDS
CGGTTCTGCGTATCAGTGAA+AGG 0.574157 1:-76455638 MsG0180004329.01.T01:CDS
GTTGAAAAGGACAACAAAGA+GGG 0.577396 1:-76455541 MsG0180004329.01.T01:CDS
GGATTATTCTTCAATTACTG+AGG 0.579159 1:-76456508 MsG0180004329.01.T01:CDS
GGTTTGGAGTGTTGAAGAAG+TGG 0.580380 1:-76459667 MsG0180004329.01.T01:CDS
ATGATATCGAGGCATTAGAA+AGG 0.589395 1:-76455698 MsG0180004329.01.T01:CDS
AGAACCTTCAAAGCTTAACC+CGG 0.596675 1:-76458692 MsG0180004329.01.T01:CDS
AAAGGCAAACATTCCTGTTG+AGG 0.598821 1:+76459690 None:intergenic
GGGAGACTCTTGATCTGCTG+TGG 0.600462 1:+76456048 None:intergenic
AATAGCCTAACCTTCTCCAA+AGG 0.600517 1:+76456027 None:intergenic
TGAAGTCCAATGGATTCGAA+TGG 0.603454 1:-76459959 MsG0180004329.01.T01:CDS
CTTCACTTACAGATCTGCCA+GGG 0.605599 1:+76458576 None:intergenic
AGATGTTAGCAGTGGAGCTG+AGG 0.607643 1:-76456451 MsG0180004329.01.T01:intron
TTACTAATCTTAGCTCTGCT+AGG 0.608261 1:-76455569 MsG0180004329.01.T01:CDS
AGTTGAAAAGGACAACAAAG+AGG 0.608977 1:-76455542 MsG0180004329.01.T01:CDS
ATGATAAAAGATGTTAGCAG+TGG 0.610343 1:-76456459 MsG0180004329.01.T01:CDS
AAGCGATGGATGAAGTCCAA+TGG 0.611498 1:-76459969 MsG0180004329.01.T01:CDS
ATCAATAGAAGATGATATCG+AGG 0.613024 1:-76455709 MsG0180004329.01.T01:CDS
CTGTTGCTATTATGTATGAG+AGG 0.614081 1:-76459758 MsG0180004329.01.T01:CDS
ATTTGGAACTGGTACTTCAG+TGG 0.622999 1:-76456094 MsG0180004329.01.T01:CDS
AGACTCTTGATCTGCTGTGG+CGG 0.628471 1:+76456051 None:intergenic
AGCTGAAGATAACCAGCCCA+AGG 0.632130 1:+76459717 None:intergenic
TCTTCAACACTCCAAACCAA+AGG 0.644717 1:+76459672 None:intergenic
GCATTGTGTGAAATCAATGC+AGG 0.646675 1:-76459885 MsG0180004329.01.T01:CDS
TGAAATCAATGCAGGTGATG+TGG 0.648395 1:-76459877 MsG0180004329.01.T01:CDS
TTCGAGATAGATGATTACCA+TGG 0.653774 1:-76458613 MsG0180004329.01.T01:CDS
TCCATATCTATGTAGCAAAG+CGG 0.658059 1:+76456157 None:intergenic
CTTCAATCATAAAACTGGTG+CGG 0.659475 1:-76456664 MsG0180004329.01.T01:CDS
TGAAGGTTCTGAATCCAACA+GGG 0.663792 1:+76458705 None:intergenic
AAAATAAGGAGTTCAATCTG+TGG 0.668743 1:+76455954 None:intergenic
GGGGAACCATGCCAAAACCA+TGG 0.671012 1:+76458596 None:intergenic
GAAAGGCGTTGATAGCGACA+TGG 0.674161 1:-76456529 MsG0180004329.01.T01:CDS
TTCACTTACAGATCTGCCAG+GGG 0.708708 1:+76458577 None:intergenic
GAAGGTTCTGAATCCAACAG+GGG 0.712164 1:+76458706 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AACATTTAAAAACTATAAAA+TGG + Chr1:76459154-76459173 None:intergenic 10.0%
!! ATATGATGTATAATAAAATA+AGG + Chr1:76459517-76459536 None:intergenic 10.0%
!! TTTATGATTTATTTATACAT+TGG - Chr1:76459996-76460015 MsG0180004329.01.T01:intron 10.0%
!!! ATATTAATATATTTTAAGGT+GGG - Chr1:76460121-76460140 MsG0180004329.01.T01:five_prime_UTR 10.0%
!!! TAATTTTTTTTCTTCTAAAT+GGG - Chr1:76459962-76459981 MsG0180004329.01.T01:CDS 10.0%
!!! TATATTAATATATTTTAAGG+TGG - Chr1:76460120-76460139 MsG0180004329.01.T01:five_prime_UTR 10.0%
!!! TTAATTTTTTTTCTTCTAAA+TGG - Chr1:76459961-76459980 MsG0180004329.01.T01:CDS 10.0%
!! ATTCAATAATCTTACAAAAT+TGG - Chr1:76457842-76457861 MsG0180004329.01.T01:intron 15.0%
!! TTCAATAATCTTACAAAATT+GGG - Chr1:76457843-76457862 MsG0180004329.01.T01:intron 15.0%
!! TTTGTAAGATTATTGAATAT+GGG + Chr1:76457840-76457859 None:intergenic 15.0%
!!! ATGTATATAGTTTTGTTTTA+GGG + Chr1:76457702-76457721 None:intergenic 15.0%
!!! ATTATACATCATATTTTTAC+CGG - Chr1:76459523-76459542 MsG0180004329.01.T01:intron 15.0%
!!! TTTATTTTTATGCATTATTG+AGG - Chr1:76455847-76455866 MsG0180004329.01.T01:CDS 15.0%
!!! TTTTGTAAGATTATTGAATA+TGG + Chr1:76457841-76457860 None:intergenic 15.0%
!! AAAAGTTAGTCATAAAATGA+GGG - Chr1:76457438-76457457 MsG0180004329.01.T01:intron 20.0%
!! AATCACTTTAGTCATATTTA+AGG - Chr1:76457807-76457826 MsG0180004329.01.T01:intron 20.0%
!! ACAATCTAATAACATAAACA+AGG + Chr1:76458030-76458049 None:intergenic 20.0%
!! ACTTAAAAGTTTATTGTATC+TGG - Chr1:76458302-76458321 MsG0180004329.01.T01:intron 20.0%
!! AGAAATATAAAAAACAAGCA+GGG - Chr1:76458492-76458511 MsG0180004329.01.T01:intron 20.0%
!! AGTATGCATTAAACTTAAAA+TGG + Chr1:76458285-76458304 None:intergenic 20.0%
!! ATACAGGTATTTAATACTTA+CGG - Chr1:76459260-76459279 MsG0180004329.01.T01:intron 20.0%
!! ATCACTTTAGTCATATTTAA+GGG - Chr1:76457808-76457827 MsG0180004329.01.T01:intron 20.0%
!! CAAAATTCAAATGAATTACA+AGG + Chr1:76456319-76456338 None:intergenic 20.0%
!! TAAAAGTTAGTCATAAAATG+AGG - Chr1:76457437-76457456 MsG0180004329.01.T01:intron 20.0%
!! TAATATAACAAAACAATGCA+TGG + Chr1:76460107-76460126 None:intergenic 20.0%
!! TATTAAATACCTGTATCAAA+TGG + Chr1:76459256-76459275 None:intergenic 20.0%
!! TTATGTTATTAGATTGTCAA+AGG - Chr1:76458033-76458052 MsG0180004329.01.T01:intron 20.0%
!! TTCAATAAAAAAAAACAAGC+AGG + Chr1:76456258-76456277 None:intergenic 20.0%
!! TTGAAAGGAAGTTTAAAAAT+TGG - Chr1:76456481-76456500 MsG0180004329.01.T01:CDS 20.0%
!!! AAACTTTTGATAAGGAAAAA+TGG + Chr1:76455416-76455435 None:intergenic 20.0%
!!! AACTTTTGATAAGGAAAAAT+GGG + Chr1:76455415-76455434 None:intergenic 20.0%
!!! AGTAGCACTAAATTTTTTTT+GGG - Chr1:76458412-76458431 MsG0180004329.01.T01:intron 20.0%
!!! AGTGTTTTTAACAATAACAA+TGG + Chr1:76456987-76457006 None:intergenic 20.0%
!!! ATTTTAAGTGTTTGTATTCT+TGG - Chr1:76458140-76458159 MsG0180004329.01.T01:intron 20.0%
!!! ATTTTTAAACTTCCTTTCAA+TGG + Chr1:76456481-76456500 None:intergenic 20.0%
!!! CATGTATATAGTTTTGTTTT+AGG + Chr1:76457703-76457722 None:intergenic 20.0%
!!! GGTGTATATAATATTTTGTT+GGG - Chr1:76458117-76458136 MsG0180004329.01.T01:intron 20.0%
!!! TAGAATCTTTTTTACACATT+TGG + Chr1:76457953-76457972 None:intergenic 20.0%
!!! TGGTGTATATAATATTTTGT+TGG - Chr1:76458116-76458135 MsG0180004329.01.T01:intron 20.0%
!!! TTATAACTTTTACAAAAACC+AGG - Chr1:76457668-76457687 MsG0180004329.01.T01:intron 20.0%
!!! TTATTTTTTTTAACTTCCAC+TGG - Chr1:76459058-76459077 MsG0180004329.01.T01:intron 20.0%
!!! TTTAGCATAAACTTTTGATA+AGG + Chr1:76455424-76455443 None:intergenic 20.0%
!!! TTTTAAGTGTTTGTATTCTT+GGG - Chr1:76458141-76458160 MsG0180004329.01.T01:intron 20.0%
! AAAAGTTTATTGTATCTGGA+GGG - Chr1:76458306-76458325 MsG0180004329.01.T01:intron 25.0%
! AAGTAAATATATGCTATCTG+AGG + Chr1:76459123-76459142 None:intergenic 25.0%
! AATCCGATTATAGTATACTA+TGG + Chr1:76457382-76457401 None:intergenic 25.0%
! AATTTATGGTAAACATCATC+CGG + Chr1:76459545-76459564 None:intergenic 25.0%
! ACTTATATGATAAGCGTTTA+TGG - Chr1:76456144-76456163 MsG0180004329.01.T01:CDS 25.0%
! ATCAATGTTCACAATATCAT+AGG + Chr1:76459342-76459361 None:intergenic 25.0%
! ATCATTGAAAATGCTTGTTT+GGG - Chr1:76455656-76455675 MsG0180004329.01.T01:CDS 25.0%
! ATGCCATAGTATACTATAAT+CGG - Chr1:76457376-76457395 MsG0180004329.01.T01:intron 25.0%
! ATTCTTCTGTTCTTAATTGT+TGG + Chr1:76458466-76458485 None:intergenic 25.0%
! ATTTAATACTTACGGGATAT+TGG - Chr1:76459268-76459287 MsG0180004329.01.T01:intron 25.0%
! CAAAAACAATAGAGAGAAAA+AGG + Chr1:76457196-76457215 None:intergenic 25.0%
! CATTATGCGAGATTTAAATT+TGG - Chr1:76455876-76455895 MsG0180004329.01.T01:CDS 25.0%
! GAGAAATATAAAAAACAAGC+AGG - Chr1:76458491-76458510 MsG0180004329.01.T01:intron 25.0%
! GAGATTTAAATTTGGACTAA+TGG - Chr1:76455884-76455903 MsG0180004329.01.T01:CDS 25.0%
! GTACGTAAAAGTTTAGATTA+TGG - Chr1:76457865-76457884 MsG0180004329.01.T01:intron 25.0%
! GTGGATATTATCATTTATCA+TGG + Chr1:76457339-76457358 None:intergenic 25.0%
! TAAAAGTTTATTGTATCTGG+AGG - Chr1:76458305-76458324 MsG0180004329.01.T01:intron 25.0%
! TACAGGTATTTAATACTTAC+GGG - Chr1:76459261-76459280 MsG0180004329.01.T01:intron 25.0%
! TAGGATTAAAAAAACTGCAA+TGG - Chr1:76458350-76458369 MsG0180004329.01.T01:intron 25.0%
! TATTTCGAGATATCATTTGA+TGG - Chr1:76459473-76459492 MsG0180004329.01.T01:intron 25.0%
! TCATAAAAGTTGTCATCAAA+AGG - Chr1:76457243-76457262 MsG0180004329.01.T01:intron 25.0%
! TGATAGAAGAGAAATGATAT+TGG - Chr1:76457110-76457129 MsG0180004329.01.T01:intron 25.0%
! TTTAATACTTACGGGATATT+GGG - Chr1:76459269-76459288 MsG0180004329.01.T01:intron 25.0%
!! AAGAAAACTTTTAGTCTGTT+TGG + Chr1:76456199-76456218 None:intergenic 25.0%
!! CATAATTTCTGAGTTTTTGA+AGG + Chr1:76459847-76459866 None:intergenic 25.0%
!! CATTATAGTTTTCTTTCACA+TGG - Chr1:76459215-76459234 MsG0180004329.01.T01:intron 25.0%
!! GATCAGAAAATTTTCACAAA+AGG + Chr1:76456656-76456675 None:intergenic 25.0%
!! TGATATTGTGAACATTGATT+TGG - Chr1:76459343-76459362 MsG0180004329.01.T01:intron 25.0%
!!! ATATATTTTAAGGTGGGATT+TGG - Chr1:76460127-76460146 MsG0180004329.01.T01:five_prime_UTR 25.0%
!!! ATTTCTGTTCAGTTTTGATT+CGG + Chr1:76458529-76458548 None:intergenic 25.0%
!!! GAGTAGCACTAAATTTTTTT+TGG - Chr1:76458411-76458430 MsG0180004329.01.T01:intron 25.0%
!!! GTAGCACTAAATTTTTTTTG+GGG - Chr1:76458413-76458432 MsG0180004329.01.T01:intron 25.0%
!!! TCTATTGTTTTTGACCAATA+AGG - Chr1:76457203-76457222 MsG0180004329.01.T01:intron 25.0%
AAAATAAGGAGTTCAATCTG+TGG + Chr1:76459503-76459522 None:intergenic 30.0%
AAATCAGTAGAGGAGAATAA+GGG + Chr1:76458708-76458727 None:intergenic 30.0%
AATAAGCTGAAAACAGCTTA+TGG + Chr1:76456021-76456040 None:intergenic 30.0%
AATATGTAACCTTGTCTCTT+CGG + Chr1:76456507-76456526 None:intergenic 30.0%
AATGATAATATCCACTGTCT+TGG - Chr1:76457344-76457363 MsG0180004329.01.T01:intron 30.0%
AATTTGGACTAATGGAACTA+TGG - Chr1:76455892-76455911 MsG0180004329.01.T01:CDS 30.0%
AGTAATAACTAGCAAATGAC+TGG + Chr1:76456947-76456966 None:intergenic 30.0%
AGTTAGAGGGGATATAAATA+GGG + Chr1:76458652-76458671 None:intergenic 30.0%
AGTTGTATTAGTCAGTTAGA+GGG + Chr1:76458665-76458684 None:intergenic 30.0%
ATATAGATGAGTGCATCATA+AGG + Chr1:76457769-76457788 None:intergenic 30.0%
ATCAATAGAAGATGATATCG+AGG - Chr1:76459745-76459764 MsG0180004329.01.T01:CDS 30.0%
ATCATGTAAGAAACGTGAAA+GGG - Chr1:76457556-76457575 MsG0180004329.01.T01:intron 30.0%
ATGATAAAAGATGTTAGCAG+TGG - Chr1:76458995-76459014 MsG0180004329.01.T01:intron 30.0%
ATTAGAGTTTCACATTGGTA+TGG + Chr1:76457499-76457518 None:intergenic 30.0%
ATTATGTATGAGAGGAGTTT+GGG - Chr1:76455704-76455723 MsG0180004329.01.T01:CDS 30.0%
ATTGTAACACAAGCTTTCTT+TGG + Chr1:76455614-76455633 None:intergenic 30.0%
CAACTTTACGTTACATTCTT+TGG - Chr1:76457533-76457552 MsG0180004329.01.T01:intron 30.0%
CTACTGATACGTCTAATTTA+TGG + Chr1:76459559-76459578 None:intergenic 30.0%
CTGTAAGAATAAATCAGTAG+AGG + Chr1:76458718-76458737 None:intergenic 30.0%
CTTAAGAAAAGGATTCTGAA+TGG + Chr1:76457308-76457327 None:intergenic 30.0%
GATATCATCACTCAAAAAAG+TGG + Chr1:76459618-76459637 None:intergenic 30.0%
GATCAAAATTCAAACAGTAC+AGG + Chr1:76460072-76460091 None:intergenic 30.0%
GATCATTGAAAATGCTTGTT+TGG - Chr1:76455655-76455674 MsG0180004329.01.T01:CDS 30.0%
GATTTCACACAATGCTTTAA+CGG + Chr1:76455564-76455583 None:intergenic 30.0%
GGATTATTCTTCAATTACTG+AGG - Chr1:76458946-76458965 MsG0180004329.01.T01:intron 30.0%
GGATTTCAAGAAAAAGGTTA+TGG - Chr1:76458162-76458181 MsG0180004329.01.T01:intron 30.0%
GTAATAACTAGCAAATGACT+GGG + Chr1:76456946-76456965 None:intergenic 30.0%
GTTGTATTAGAGTTTCACAT+TGG + Chr1:76457504-76457523 None:intergenic 30.0%
TAAATCAGTAGAGGAGAATA+AGG + Chr1:76458709-76458728 None:intergenic 30.0%
TAATGACTTGAGTTCATCTA+CGG + Chr1:76457013-76457032 None:intergenic 30.0%
TAGTTGTATTAGTCAGTTAG+AGG + Chr1:76458666-76458685 None:intergenic 30.0%
TATGATCAAGCTACATTGAT+TGG + Chr1:76458063-76458082 None:intergenic 30.0%
TATTATGTATGAGAGGAGTT+TGG - Chr1:76455703-76455722 MsG0180004329.01.T01:CDS 30.0%
TCACAACTATATCCATTGAA+AGG - Chr1:76456466-76456485 MsG0180004329.01.T01:CDS 30.0%
TCTTTGGATAAAACTGAGAA+AGG - Chr1:76458908-76458927 MsG0180004329.01.T01:intron 30.0%
TGTAATAGGGTTGTTTGTAT+TGG - Chr1:76455918-76455937 MsG0180004329.01.T01:CDS 30.0%
TTCAAAATACGAAAGCTTCA+AGG + Chr1:76456355-76456374 None:intergenic 30.0%
TTCTGATCTCTTATCATTGT+AGG - Chr1:76456668-76456687 MsG0180004329.01.T01:intron 30.0%
TTCTTGGGATTTCAAGAAAA+AGG - Chr1:76458156-76458175 MsG0180004329.01.T01:intron 30.0%
! AAAATTTAGTGCTACTCTGT+AGG + Chr1:76458408-76458427 None:intergenic 30.0%
! ATAGATGATTACCATGGTTT+TGG - Chr1:76456847-76456866 MsG0180004329.01.T01:intron 30.0%
! ATGTTGTATGTGGTTTGTAT+AGG - Chr1:76458331-76458350 MsG0180004329.01.T01:intron 30.0%
! CTCGAAATATTCAGAGTTTT+CGG + Chr1:76459462-76459481 None:intergenic 30.0%
! TAGCTTGCAATTAGTTATCT+TGG - Chr1:76458199-76458218 MsG0180004329.01.T01:intron 30.0%
! TCGAGAAGAAATAAGACTTT+TGG + Chr1:76456818-76456837 None:intergenic 30.0%
! TCTTCCAATTTTTACACGTT+CGG - Chr1:76457977-76457996 MsG0180004329.01.T01:intron 30.0%
!! CTACTGATTTATTCTTACAG+TGG - Chr1:76458718-76458737 MsG0180004329.01.T01:CDS 30.0%
!! TGGTTTCTAAAATCCAAACA+AGG + Chr1:76457933-76457952 None:intergenic 30.0%
!! TTCTCAAAAGCTTAGCTTTT+AGG - Chr1:76457633-76457652 MsG0180004329.01.T01:intron 30.0%
!! TTGCTTGTTAGTTTGTCTTT+AGG - Chr1:76456281-76456300 MsG0180004329.01.T01:intron 30.0%
!! TTTCTCAGTTTTATCCAAAG+AGG + Chr1:76458909-76458928 None:intergenic 30.0%
!!! AGTTTTGATTCGGCAATAAA+AGG + Chr1:76458519-76458538 None:intergenic 30.0%
!!! TTTCACGACTCTTCTTTTTT+AGG - Chr1:76456584-76456603 MsG0180004329.01.T01:CDS 30.0%
AACAGAGACACATAGATGAA+AGG + Chr1:76459039-76459058 None:intergenic 35.0%
AAGAGTAGAAGAGTGACTAT+TGG + Chr1:76459186-76459205 None:intergenic 35.0%
ACTAGCTCAAAATTCCTCTT+TGG - Chr1:76458892-76458911 MsG0180004329.01.T01:intron 35.0%
AGAATAAAATTCTCCCGAAG+GGG - Chr1:76458551-76458570 MsG0180004329.01.T01:intron 35.0%
AGTTGAAAAGGACAACAAAG+AGG - Chr1:76459912-76459931 MsG0180004329.01.T01:CDS 35.0%
ATAACATAAACAAGGACCTC+TGG + Chr1:76458022-76458041 None:intergenic 35.0%
ATAGGGGGAAATCAAAATAG+AGG + Chr1:76458635-76458654 None:intergenic 35.0%
ATCCTCATACAAGACTTTCT+TGG + Chr1:76458242-76458261 None:intergenic 35.0%
ATTGAAAATGCTTGTTTGGG+TGG - Chr1:76455659-76455678 MsG0180004329.01.T01:CDS 35.0%
CAGTTAGAGGGGATATAAAT+AGG + Chr1:76458653-76458672 None:intergenic 35.0%
CCAATAAGGAGAGAAAAAGA+AGG - Chr1:76457217-76457236 MsG0180004329.01.T01:intron 35.0%
CTCATTCTTCCATTTGATAC+AGG - Chr1:76459244-76459263 MsG0180004329.01.T01:intron 35.0%
CTTCAATCATAAAACTGGTG+CGG - Chr1:76458790-76458809 MsG0180004329.01.T01:intron 35.0%
CTTGCAATTAGTTATCTTGG+TGG - Chr1:76458202-76458221 MsG0180004329.01.T01:intron 35.0%
GAAGAATCTTCACGCATATT+TGG + Chr1:76457070-76457089 None:intergenic 35.0%
GAATCCGAACGTGTAAAAAT+TGG + Chr1:76457984-76458003 None:intergenic 35.0%
GACATAAACATTTGTGAGAC+TGG - Chr1:76455961-76455980 MsG0180004329.01.T01:CDS 35.0%
GAGAATAAAATTCTCCCGAA+GGG - Chr1:76458550-76458569 MsG0180004329.01.T01:intron 35.0%
GAGAGATAGTTGTCACAAAA+TGG + Chr1:76457140-76457159 None:intergenic 35.0%
GATCATGTAAGAAACGTGAA+AGG - Chr1:76457555-76457574 MsG0180004329.01.T01:intron 35.0%
GGAACTATGGCAATGTAATA+GGG - Chr1:76455905-76455924 MsG0180004329.01.T01:CDS 35.0%
GTATCAAATGGAAGAATGAG+AGG + Chr1:76459244-76459263 None:intergenic 35.0%
GTTAGAGGGGATATAAATAG+GGG + Chr1:76458651-76458670 None:intergenic 35.0%
GTTGAAAAGGACAACAAAGA+GGG - Chr1:76459913-76459932 MsG0180004329.01.T01:CDS 35.0%
GTTGTATTAGTCAGTTAGAG+GGG + Chr1:76458664-76458683 None:intergenic 35.0%
TCCAGCTTCAATCATAAAAC+TGG - Chr1:76458785-76458804 MsG0180004329.01.T01:intron 35.0%
TCCATATCTATGTAGCAAAG+CGG + Chr1:76459300-76459319 None:intergenic 35.0%
TGAGAATAAAATTCTCCCGA+AGG - Chr1:76458549-76458568 MsG0180004329.01.T01:intron 35.0%
TGGAAAGCTGTATCATTCTT+CGG - Chr1:76459796-76459815 MsG0180004329.01.T01:CDS 35.0%
TGGAACTATGGCAATGTAAT+AGG - Chr1:76455904-76455923 MsG0180004329.01.T01:CDS 35.0%
TGGTGCTCTTACTTAAGAAA+AGG + Chr1:76457319-76457338 None:intergenic 35.0%
TTAGAGGGGATATAAATAGG+GGG + Chr1:76458650-76458669 None:intergenic 35.0%
TTCGAGATAGATGATTACCA+TGG - Chr1:76456841-76456860 MsG0180004329.01.T01:intron 35.0%
TTCTGGTATAGTGAAACTGT+TGG + Chr1:76457726-76457745 None:intergenic 35.0%
TTGGTATGGAAATGAACAGT+TGG + Chr1:76457485-76457504 None:intergenic 35.0%
! AACCAAGAAAGTCTTGTATG+AGG - Chr1:76458237-76458256 MsG0180004329.01.T01:intron 35.0%
! AAGAGAAATCTTTTGCGAAG+AGG + Chr1:76458579-76458598 None:intergenic 35.0%
! AGTTATCTTGGTGGTTTACA+TGG - Chr1:76458211-76458230 MsG0180004329.01.T01:intron 35.0%
! ATGATATCGAGGCATTAGAA+AGG - Chr1:76459756-76459775 MsG0180004329.01.T01:CDS 35.0%
! CAAAGCATCACAAACTTCTT+TGG + Chr1:76459684-76459703 None:intergenic 35.0%
! CCTTCTTTTTCTCTCCTTAT+TGG + Chr1:76457220-76457239 None:intergenic 35.0%
! CTGTTGCTATTATGTATGAG+AGG - Chr1:76455696-76455715 MsG0180004329.01.T01:CDS 35.0%
! TAACGGATATTCCTTCTTCT+GGG + Chr1:76455547-76455566 None:intergenic 35.0%
! TCTAAAACTACGCTAACTAC+TGG - Chr1:76458096-76458115 MsG0180004329.01.T01:intron 35.0%
! TTAACGGATATTCCTTCTTC+TGG + Chr1:76455548-76455567 None:intergenic 35.0%
!! ACATTGGTGCATTGATTCAT+TGG - Chr1:76460012-76460031 MsG0180004329.01.T01:intron 35.0%
!! ACCAGTTTTATGATTGAAGC+TGG + Chr1:76458789-76458808 None:intergenic 35.0%
!! AGTCTTGTATGAGGATTTTG+AGG - Chr1:76458246-76458265 MsG0180004329.01.T01:intron 35.0%
!! TGATAAGGAAAAATGGGTTG+TGG + Chr1:76455409-76455428 None:intergenic 35.0%
!! TGTGAACATTGATTTGGAAC+TGG - Chr1:76459349-76459368 MsG0180004329.01.T01:intron 35.0%
!! TTACTAATCTTAGCTCTGCT+AGG - Chr1:76459885-76459904 MsG0180004329.01.T01:CDS 35.0%
!!! AGGTGTAGTTTTGTTAGAGA+TGG - Chr1:76459776-76459795 MsG0180004329.01.T01:CDS 35.0%
!!! TGTTTTAGGGAATATTCTCC+TGG + Chr1:76457689-76457708 None:intergenic 35.0%
AAAAATTGGCCGAAGAGACA+AGG - Chr1:76456495-76456514 MsG0180004329.01.T01:CDS 40.0%
AAAGGCAAACATTCCTGTTG+AGG + Chr1:76455767-76455786 None:intergenic 40.0%
AACGGATATTCCTTCTTCTG+GGG + Chr1:76455546-76455565 None:intergenic 40.0%
AAGCTTAACCCGGAATTCTT+TGG - Chr1:76456772-76456791 MsG0180004329.01.T01:intron 40.0%
AATAGCCTAACCTTCTCCAA+AGG + Chr1:76459430-76459449 None:intergenic 40.0%
AGAACCATAGTAATCACCAG+AGG + Chr1:76456904-76456923 None:intergenic 40.0%
AGAACCTTCAAAGCTTAACC+CGG - Chr1:76456762-76456781 MsG0180004329.01.T01:intron 40.0%
AGACAAAGCTCTTGTCTATG+AGG - Chr1:76456705-76456724 MsG0180004329.01.T01:intron 40.0%
AGAGAATATTCTACCCCTGT+TGG - Chr1:76456735-76456754 MsG0180004329.01.T01:intron 40.0%
AGAGAGAAAAAGGAAGAGAG+AGG + Chr1:76457186-76457205 None:intergenic 40.0%
AGGAATGTTTGCCTTTGGTT+TGG - Chr1:76455771-76455790 MsG0180004329.01.T01:CDS 40.0%
ATAGCCTAACCTTCTCCAAA+GGG + Chr1:76459429-76459448 None:intergenic 40.0%
ATGCACGTTTCAATGAACCT+CGG + Chr1:76456427-76456446 None:intergenic 40.0%
CTAAAATCTGGACAAACCAG+AGG - Chr1:76458003-76458022 MsG0180004329.01.T01:intron 40.0%
CTCAAAGAGCTTATGGAAAC+AGG - Chr1:76455984-76456003 MsG0180004329.01.T01:CDS 40.0%
CTGCTAGGAAGAAGTTGAAA+AGG - Chr1:76459900-76459919 MsG0180004329.01.T01:CDS 40.0%
GAGCAACACATTGCAATTTG+TGG - Chr1:76455517-76455536 MsG0180004329.01.T01:exon 40.0%
GCATTGTGTGAAATCAATGC+AGG - Chr1:76455569-76455588 MsG0180004329.01.T01:CDS 40.0%
GCGATATGCTTGTGTGAAAA+TGG - Chr1:76456223-76456242 MsG0180004329.01.T01:intron 40.0%
GCTCATGTATAGTGCATACT+TGG - Chr1:76457587-76457606 MsG0180004329.01.T01:intron 40.0%
GTCTTCTAACAACGAATCTG+AGG - Chr1:76458835-76458854 MsG0180004329.01.T01:intron 40.0%
TCAACAGGAATGTTTGCCTT+TGG - Chr1:76455766-76455785 MsG0180004329.01.T01:CDS 40.0%
TCAGCTGGCAATATTCATTC+TGG + Chr1:76457743-76457762 None:intergenic 40.0%
TCTTCAACACTCCAAACCAA+AGG + Chr1:76455785-76455804 None:intergenic 40.0%
TGAAATCAATGCAGGTGATG+TGG - Chr1:76455577-76455596 MsG0180004329.01.T01:CDS 40.0%
TGAGGATGATACTTCAATGC+TGG - Chr1:76458964-76458983 MsG0180004329.01.T01:intron 40.0%
TGATACTTCAATGCTGGAGA+TGG - Chr1:76458970-76458989 MsG0180004329.01.T01:intron 40.0%
TGTTCCACACCAAAGAATTC+CGG + Chr1:76456784-76456803 None:intergenic 40.0%
! AATTCCGGGTTAAGCTTTGA+AGG + Chr1:76456769-76456788 None:intergenic 40.0%
! ATTTGGAACTGGTACTTCAG+TGG - Chr1:76459360-76459379 MsG0180004329.01.T01:intron 40.0%
! TCTTCAGCTTTTACCTCAAC+AGG - Chr1:76455751-76455770 MsG0180004329.01.T01:CDS 40.0%
! TGAAGTCCAATGGATTCGAA+TGG - Chr1:76455495-76455514 MsG0180004329.01.T01:three_prime_UTR 40.0%
! TGATGCTGATTGCATTTGAG+TGG - Chr1:76456537-76456556 MsG0180004329.01.T01:CDS 40.0%
! TTGTGATGCTTTGTTGTCAC+TGG - Chr1:76459691-76459710 MsG0180004329.01.T01:CDS 40.0%
!! CACGTTCGGATTCTAAAATC+TGG - Chr1:76457991-76458010 MsG0180004329.01.T01:intron 40.0%
!! TGAAGGTTCTGAATCCAACA+GGG + Chr1:76456752-76456771 None:intergenic 40.0%
!! TTGAAGGTTCTGAATCCAAC+AGG + Chr1:76456753-76456772 None:intergenic 40.0%
!!! TGATTACCATGGTTTTGGCA+TGG - Chr1:76456852-76456871 MsG0180004329.01.T01:intron 40.0%
AAGCGATGGATGAAGTCCAA+TGG - Chr1:76455485-76455504 MsG0180004329.01.T01:three_prime_UTR 45.0%
AAGCTCTTGTCTATGAGGAC+TGG - Chr1:76456710-76456729 MsG0180004329.01.T01:intron 45.0%
ACCAACCACTACACTTCTAG+AGG - Chr1:76457906-76457925 MsG0180004329.01.T01:intron 45.0%
AGATCTGTAAGTGAAGCCTC+TGG - Chr1:76456885-76456904 MsG0180004329.01.T01:intron 45.0%
ATTGACAAGTGCCAAGACAG+TGG + Chr1:76457358-76457377 None:intergenic 45.0%
CTGGAGGGTAATGTTGTATG+TGG - Chr1:76458321-76458340 MsG0180004329.01.T01:intron 45.0%
CTTCACTTACAGATCTGCCA+GGG + Chr1:76456881-76456900 None:intergenic 45.0%
GAAGCCTCTGGTGATTACTA+TGG - Chr1:76456897-76456916 MsG0180004329.01.T01:intron 45.0%
GACTGATCATCACTTTCCAG+TGG + Chr1:76459077-76459096 None:intergenic 45.0%
GATATGAGGGAGAGTCTCTA+TGG - Chr1:76459716-76459735 MsG0180004329.01.T01:CDS 45.0%
GCTGGAGAAGACAGTGTTAT+AGG + Chr1:76458771-76458790 None:intergenic 45.0%
GCTTGTTTGGGTGGCTATTT+GGG - Chr1:76455668-76455687 MsG0180004329.01.T01:CDS 45.0%
GTTCCACACCAAAGAATTCC+GGG + Chr1:76456783-76456802 None:intergenic 45.0%
GTTGCTCCATTCGAATCCAT+TGG + Chr1:76455504-76455523 None:intergenic 45.0%
GTTTACGTGCATTCAAGCGA+TGG - Chr1:76455471-76455490 MsG0180004329.01.T01:three_prime_UTR 45.0%
TAACCCGGAATTCTTTGGTG+TGG - Chr1:76456777-76456796 MsG0180004329.01.T01:intron 45.0%
TGCATCATAAGGCAATCAGC+TGG + Chr1:76457758-76457777 None:intergenic 45.0%
TGCTTGTTTGGGTGGCTATT+TGG - Chr1:76455667-76455686 MsG0180004329.01.T01:CDS 45.0%
TTCACTTACAGATCTGCCAG+GGG + Chr1:76456880-76456899 None:intergenic 45.0%
! AAGGACCTCTAGAAGTGTAG+TGG + Chr1:76457914-76457933 None:intergenic 45.0%
! ACCTCTAGAAGTGTAGTGGT+TGG + Chr1:76457910-76457929 None:intergenic 45.0%
! AGACTGGCTCAAAGAGCTTA+TGG - Chr1:76455977-76455996 MsG0180004329.01.T01:CDS 45.0%
! CACTTCTAGAGGTCCTTGTT+TGG - Chr1:76457917-76457936 MsG0180004329.01.T01:intron 45.0%
! GCCGCTTTGCTACATAGATA+TGG - Chr1:76459296-76459315 MsG0180004329.01.T01:intron 45.0%
! GTTGTCACTGGCTGATATGA+GGG - Chr1:76459703-76459722 MsG0180004329.01.T01:CDS 45.0%
! TGTTGTCACTGGCTGATATG+AGG - Chr1:76459702-76459721 MsG0180004329.01.T01:CDS 45.0%
!! CTCTTCATTTGCTATGACCG+AGG - Chr1:76456407-76456426 MsG0180004329.01.T01:intron 45.0%
!! GAAGGTTCTGAATCCAACAG+GGG + Chr1:76456751-76456770 None:intergenic 45.0%
!! GGTTTGGAGTGTTGAAGAAG+TGG - Chr1:76455787-76455806 MsG0180004329.01.T01:CDS 45.0%
!!! TTCAGAGTTTTCGGTGTCAC+TGG + Chr1:76459453-76459472 None:intergenic 45.0%
!!! TGTTATATTAATATATTTTA+AGG - Chr1:76460117-76460136 MsG0180004329.01.T01:five_prime_UTR 5.0%
AGACTCTTGATCTGCTGTGG+CGG + Chr1:76459406-76459425 None:intergenic 50.0%
AGAGAGAGAGAGAGAGAGAG+AGG + Chr1:76455332-76455351 None:intergenic 50.0%
AGATGTTAGCAGTGGAGCTG+AGG - Chr1:76459003-76459022 MsG0180004329.01.T01:intron 50.0%
AGCTGAAGATAACCAGCCCA+AGG + Chr1:76455740-76455759 None:intergenic 50.0%
CGGTTCTGCGTATCAGTGAA+AGG - Chr1:76459816-76459835 MsG0180004329.01.T01:CDS 50.0%
GACGTATCAGTAGCAGTTGC+TGG - Chr1:76459566-76459585 MsG0180004329.01.T01:intron 50.0%
GAGGTGTAAACATGCGTACC+TGG + Chr1:76455374-76455393 None:intergenic 50.0%
GCAGATCAAGAGTCTCCCTT+TGG - Chr1:76459411-76459430 MsG0180004329.01.T01:intron 50.0%
GCTCAGTACCACACAAAAGC+TGG + Chr1:76455814-76455833 None:intergenic 50.0%
GCTTCACTTACAGATCTGCC+AGG + Chr1:76456882-76456901 None:intergenic 50.0%
GTATGAGAGGAGTTTGGGTG+AGG - Chr1:76455709-76455728 MsG0180004329.01.T01:CDS 50.0%
GTGTAAACATGCGTACCTGG+TGG + Chr1:76455371-76455390 None:intergenic 50.0%
GTTGTGGCGAAAATCGAGAG+AGG + Chr1:76455393-76455412 None:intergenic 50.0%
TCTCTCTCTCTCTCTCTCTG+TGG - Chr1:76455339-76455358 MsG0180004329.01.T01:three_prime_UTR 50.0%
TCTCTCTCTCTCTGTGGCAA+TGG - Chr1:76455345-76455364 MsG0180004329.01.T01:three_prime_UTR 50.0%
TTTGCGAAGAGGAACCCCTT+CGG + Chr1:76458568-76458587 None:intergenic 50.0%
TTTGGGTGAGGAGTCTCCTT+GGG - Chr1:76455721-76455740 MsG0180004329.01.T01:CDS 50.0%
TTTGTGGACACCCCAGAAGA+AGG - Chr1:76455533-76455552 MsG0180004329.01.T01:CDS 50.0%
! CAAGAGTCTCCCTTTGGAGA+AGG - Chr1:76459417-76459436 MsG0180004329.01.T01:intron 50.0%
! GAAGTGGACCAGCTTTTGTG+TGG - Chr1:76455803-76455822 MsG0180004329.01.T01:CDS 50.0%
! GTCTCCCTTTGGAGAAGGTT+AGG - Chr1:76459422-76459441 MsG0180004329.01.T01:intron 50.0%
! GTGTGGTACTGAGCTTCATC+AGG - Chr1:76455820-76455839 MsG0180004329.01.T01:CDS 50.0%
!! GAAAGGCGTTGATAGCGACA+TGG - Chr1:76458925-76458944 MsG0180004329.01.T01:intron 50.0%
GGGAGACTCTTGATCTGCTG+TGG + Chr1:76459409-76459428 None:intergenic 55.0%
GGGGAACCATGCCAAAACCA+TGG + Chr1:76456861-76456880 None:intergenic 55.0%
GTTTGGGTGAGGAGTCTCCT+TGG - Chr1:76455720-76455739 MsG0180004329.01.T01:CDS 55.0%
TCTTGATCTGCTGTGGCGGT+TGG + Chr1:76459402-76459421 None:intergenic 55.0%
TTGCGAAGAGGAACCCCTTC+GGG + Chr1:76458567-76458586 None:intergenic 55.0%
!!! TGGTTTTGGCATGGTTCCCC+TGG - Chr1:76456861-76456880 MsG0180004329.01.T01:intron 55.0%
TCTCTGTGGCAATGGCCACC+AGG - Chr1:76455353-76455372 MsG0180004329.01.T01:three_prime_UTR 60.0%
GGTGAGGAGTCTCCTTGGGC+TGG - Chr1:76455725-76455744 MsG0180004329.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr1 gene 76455328 76460148 76455328 ID=MsG0180004329.01;Name=MsG0180004329.01
Chr1 mRNA 76455328 76460148 76455328 ID=MsG0180004329.01.T01;Parent=MsG0180004329.01;Name=MsG0180004329.01.T01;_AED=0.38;_eAED=0.38;_QI=36|1|1|1|1|1|5|205|497
Chr1 exon 76455328 76456210 76455328 ID=MsG0180004329.01.T01:exon:44839;Parent=MsG0180004329.01.T01
Chr1 exon 76456452 76456686 76456452 ID=MsG0180004329.01.T01:exon:44838;Parent=MsG0180004329.01.T01
Chr1 exon 76458586 76458782 76458586 ID=MsG0180004329.01.T01:exon:44837;Parent=MsG0180004329.01.T01
Chr1 exon 76459635 76460007 76459635 ID=MsG0180004329.01.T01:exon:44836;Parent=MsG0180004329.01.T01
Chr1 exon 76460102 76460148 76460102 ID=MsG0180004329.01.T01:exon:44835;Parent=MsG0180004329.01.T01
Chr1 five_prime_UTR 76460113 76460148 76460113 ID=MsG0180004329.01.T01:five_prime_utr;Parent=MsG0180004329.01.T01
Chr1 CDS 76460102 76460112 76460102 ID=MsG0180004329.01.T01:cds;Parent=MsG0180004329.01.T01
Chr1 CDS 76459635 76460007 76459635 ID=MsG0180004329.01.T01:cds;Parent=MsG0180004329.01.T01
Chr1 CDS 76458586 76458782 76458586 ID=MsG0180004329.01.T01:cds;Parent=MsG0180004329.01.T01
Chr1 CDS 76456452 76456686 76456452 ID=MsG0180004329.01.T01:cds;Parent=MsG0180004329.01.T01
Chr1 CDS 76455533 76456210 76455533 ID=MsG0180004329.01.T01:cds;Parent=MsG0180004329.01.T01
Chr1 three_prime_UTR 76455328 76455532 76455328 ID=MsG0180004329.01.T01:three_prime_utr;Parent=MsG0180004329.01.T01
Gene Sequence

>MsG0180004329.01.T01

ATGGCCACCAGACGTTTACGTGCATTCAAGCGATGGATGAAGTCCAATGGATTCGAATGGAGCAACACATTGCAATTTGTGGACACCCCAGAAGAAGGAATATCCGTTAAAGCATTGTGTGAAATCAATGCAGGTGATGTGGTTGCTAAAATGCCAAAGAAAGCTTGTGTTACAATCAAGACTAGTAGTGCTTGTGAGATCATTGAAAATGCTTGTTTGGGTGGCTATTTGGGTTTAGCTGTTGCTATTATGTATGAGAGGAGTTTGGGTGAGGAGTCTCCTTGGGCTGGTTATCTTCAGCTTTTACCTCAACAGGAATGTTTGCCTTTGGTTTGGAGTGTTGAAGAAGTGGACCAGCTTTTGTGTGGTACTGAGCTTCATCAGACAGTGCAAGAAGACAAAGCTCTTGTCTATGAGGACTGGAAAGAGAATATTCTACCCCTGTTGGATTCAGAACCTTCAAAGCTTAACCCGGAATTCTTTGGTGTGGAACAGTACTTTGCAGCCAAAAGTCTTATTTCTTCTCGATCTTTCGAGATAGATGATTACCATGGTTTTGGCATGGTTCCCCTGGCAGATCTCTTCAATCATAAAACTGGTGCGGAAGATGTGCATTTCACTGCTTTGTCTTCTAACAACGAATCTGAGGATGACACTGATGACGAAATTGTTGATGAAGAAGCACTAGCTCAAAATTCCTCTTTGGATAAAACTGAGAAAGGCGTTGATAGCGACATGGATTATTCTTCAATTACTGAGGATGATACTTCAATGCTGGAGATGGTTATGATAAAAGATGTTAGCAGTGGAGCTGAGGTATTTAATACTTACGGGATATTGGGTAATGCCGCTTTGCTACATAGATATGGATTTACTGAGCAAGATAACACCTATGATATTGTGAACATTGATTTGGAACTGGTACTTCAGTGGTGTTCTTCTTTGTTCTCCAACCGCCACAGCAGATCAAGAGTCTCCCTTTGGAGAAGGTTAGGCTATTCCAGTGACACCGAAAACTCTGAATATTTCGAGATATCATTTGATGGAGAACCACAGATTGAACTCCTTATTTTATTATACATCATATTTTTACCGGATGATGTTTACCATAAATTAGACGTATCAGTAGCAGTTGCTGGAAATTGTCATGAATCAAGTGAAAAAACCACTTTTTTGAGTGATGATATCTTTCTAAAGAAGCTGTCTAATATGAGCAAGAAAACTTTGATGACCAAAGAAGTTTGTGATGCTTTGTTGTCACTGGCTGATATGAGGGAGAGTCTCTATGGTTTGAAATCAATAGAAGATGATATCGAGGCATTAGAAAGGTGTAGTTTTGTTAGAGATGGAAAGCTGTATCATTCTTCGGTTCTGCGTATCAGTGAAAGGAAGATCCTTCAAAAACTCAGAAATTATGCTTCAAAGTCGTGTAAGATTACTAATCTTAGCTCTGCTAGGAAGAAGTTGAAAAGGACAACAAAGAGGGAGAGTTGA
Protein sequence

>MsG0180004329.01.T01

MATRRLRAFKRWMKSNGFEWSNTLQFVDTPEEGISVKALCEINAGDVVAKMPKKACVTIKTSSACEIIENACLGGYLGLAVAIMYERSLGEESPWAGYLQLLPQQECLPLVWSVEEVDQLLCGTELHQTVQEDKALVYEDWKENILPLLDSEPSKLNPEFFGVEQYFAAKSLISSRSFEIDDYHGFGMVPLADLFNHKTGAEDVHFTALSSNNESEDDTDDEIVDEEALAQNSSLDKTEKGVDSDMDYSSITEDDTSMLEMVMIKDVSSGAEVFNTYGILGNAALLHRYGFTEQDNTYDIVNIDLELVLQWCSSLFSNRHSRSRVSLWRRLGYSSDTENSEYFEISFDGEPQIELLILLYIIFLPDDVYHKLDVSVAVAGNCHESSEKTTFLSDDIFLKKLSNMSKKTLMTKEVCDALLSLADMRESLYGLKSIEDDIEALERCSFVRDGKLYHSSVLRISERKILQKLRNYASKSCKITNLSSARKKLKRTTKRES*