AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180004568.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180004568.01.T02 MTR_1g082690 96.689 151 4 1 32 181 53 203 4.95e-99 296
MsG0180004568.01.T02 MTR_4g093850 50.920 163 73 3 19 181 30 185 4.42e-50 169
MsG0180004568.01.T02 MTR_4g093850 50.920 163 73 3 19 181 30 185 1.43e-49 169
MsG0180004568.01.T02 MTR_2g009340 46.012 163 81 2 19 181 30 185 5.16e-48 166
MsG0180004568.01.T02 MTR_8g090220 47.917 144 73 1 38 181 53 194 1.65e-46 159
MsG0180004568.01.T02 MTR_8g090220 47.917 144 73 1 38 181 53 194 6.68e-46 159
MsG0180004568.01.T02 MTR_2g048390 46.528 144 75 1 38 181 27 168 2.99e-42 147
MsG0180004568.01.T02 MTR_1g094850 44.604 139 74 2 38 176 27 162 9.40e-37 134
MsG0180004568.01.T02 MTR_1g014070 42.361 144 80 1 38 181 28 168 2.06e-36 133
MsG0180004568.01.T02 MTR_5g015790 42.361 144 79 1 38 181 28 167 6.91e-35 129
MsG0180004568.01.T02 MTR_2g018750 41.250 160 86 4 23 181 16 168 5.16e-34 126
MsG0180004568.01.T02 MTR_1g106430 40.278 144 83 1 38 181 29 169 9.06e-34 125
MsG0180004568.01.T02 MTR_1g064360 37.107 159 94 3 23 181 16 168 5.55e-33 123
MsG0180004568.01.T02 MTR_8g069330 42.254 142 78 2 40 180 29 167 8.38e-33 123
MsG0180004568.01.T02 MTR_2g084595 34.969 163 101 2 19 181 9 166 2.92e-32 120
MsG0180004568.01.T02 MTR_4g095430 39.583 144 86 1 38 181 14 156 4.24e-32 121
MsG0180004568.01.T02 MTR_5g075640 38.194 144 86 2 38 181 26 166 6.35e-32 120
MsG0180004568.01.T02 MTR_2g084595 34.969 163 101 2 19 181 9 166 1.28e-31 120
MsG0180004568.01.T02 MTR_4g134210 35.664 143 89 1 38 180 27 166 4.89e-31 118
MsG0180004568.01.T02 MTR_8g078900 35.404 161 85 2 38 180 21 180 6.83e-31 117
MsG0180004568.01.T02 MTR_8g078900 35.404 161 85 2 38 180 21 180 1.89e-30 116
MsG0180004568.01.T02 MTR_4g022330 41.379 145 80 2 38 181 35 175 3.28e-30 115
MsG0180004568.01.T02 MTR_5g032780 37.580 157 95 2 27 181 14 169 3.60e-30 115
MsG0180004568.01.T02 MTR_5g016060 39.583 144 84 2 38 181 41 181 2.96e-29 113
MsG0180004568.01.T02 MTR_3g062540 37.500 144 83 2 38 179 25 163 3.25e-29 113
MsG0180004568.01.T02 MTR_2g027410 33.793 145 91 2 38 181 27 167 1.78e-28 110
MsG0180004568.01.T02 MTR_7g108290 38.621 145 84 2 38 181 37 177 6.32e-28 109
MsG0180004568.01.T02 MTR_7g073980 36.667 150 88 3 35 181 31 176 1.78e-27 108
MsG0180004568.01.T02 MTR_8g078900 36.000 150 77 2 49 180 2 150 3.89e-27 107
MsG0180004568.01.T02 MTR_1g088885 38.194 144 86 1 38 181 37 177 3.92e-27 107
MsG0180004568.01.T02 MTR_5g075640 39.200 125 73 2 57 181 2 123 1.46e-25 102
MsG0180004568.01.T02 MTR_8g078900 43.434 99 56 0 82 180 42 140 1.53e-24 99.0
MsG0180004568.01.T02 MTR_8g078900 43.434 99 56 0 82 180 42 140 3.15e-24 99.0
MsG0180004568.01.T02 MTR_3g062540 36.800 125 72 2 57 179 2 121 1.25e-22 94.4
MsG0180004568.01.T02 MTR_1g105870 33.333 132 87 1 44 175 38 168 9.85e-22 89.4
MsG0180004568.01.T02 MTR_2g027410 37.895 95 59 0 87 181 1 95 1.64e-21 90.9
MsG0180004568.01.T02 MTR_1g035720 33.065 124 74 4 40 161 6 122 1.31e-13 68.6
MsG0180004568.01.T02 MTR_4g074190 30.612 147 92 4 40 180 6 148 4.34e-13 66.6
MsG0180004568.01.T02 MTR_4g074190 30.612 147 92 4 40 180 6 148 5.04e-13 66.6
MsG0180004568.01.T02 MTR_4g074190 34.000 100 65 1 82 180 3 102 1.35e-12 65.5
MsG0180004568.01.T01 MTR_1g082690 92.661 218 16 0 1 218 293 510 3.22e-145 416
MsG0180004568.01.T01 MTR_2g009340 39.623 212 105 4 1 191 341 550 6.21e-46 162
MsG0180004568.01.T01 MTR_4g093850 39.091 220 112 3 1 199 336 554 4.25e-44 157
MsG0180004568.01.T01 MTR_2g084595 31.905 210 129 1 1 196 294 503 1.32e-37 138
MsG0180004568.01.T01 MTR_4g011530 34.146 205 123 3 1 193 122 326 2.44e-37 135
MsG0180004568.01.T01 MTR_8g090220 32.411 253 134 6 1 222 305 551 5.56e-37 137
MsG0180004568.01.T01 MTR_7g073980 36.232 207 115 2 1 190 284 490 7.42e-37 136
MsG0180004568.01.T01 MTR_4g095430 32.857 210 129 2 1 199 267 475 4.01e-36 134
MsG0180004568.01.T01 MTR_8g090220 35.533 197 105 4 1 177 305 499 1.10e-35 132
MsG0180004568.01.T01 MTR_2g102730 33.333 195 123 3 1 190 102 294 2.85e-34 127
MsG0180004568.01.T01 MTR_8g078900 34.247 219 119 4 2 195 262 480 5.04e-34 128
MsG0180004568.01.T01 MTR_5g032780 33.740 246 123 5 1 210 295 536 5.37e-34 128
MsG0180004568.01.T01 MTR_8g078900 34.247 219 119 4 2 195 302 520 6.88e-34 128
MsG0180004568.01.T01 MTR_8g078900 34.247 219 119 4 2 195 272 490 8.12e-34 128
MsG0180004568.01.T01 MTR_5g016060 33.831 201 119 3 1 187 177 377 1.21e-33 126
MsG0180004568.01.T01 MTR_1g106430 32.456 228 132 3 1 209 281 505 1.74e-33 127
MsG0180004568.01.T01 MTR_5g016060 33.831 201 119 3 1 187 291 491 2.12e-33 127
MsG0180004568.01.T01 MTR_2g018750 31.405 242 128 5 1 218 290 517 2.35e-32 124
MsG0180004568.01.T01 MTR_4g134210 35.025 197 118 3 1 187 277 473 1.37e-31 121
MsG0180004568.01.T01 MTR_1g064360 29.493 217 132 3 1 196 270 486 6.58e-31 119
MsG0180004568.01.T01 MTR_4g022330 32.273 220 127 4 1 200 285 502 3.90e-30 117
MsG0180004568.01.T01 MTR_1g088885 29.694 229 132 4 1 200 277 505 8.28e-30 116
MsG0180004568.01.T01 MTR_1g094850 30.045 223 129 4 1 196 284 506 1.42e-29 115
MsG0180004568.01.T01 MTR_5g075640 34.031 191 113 3 1 178 269 459 2.05e-29 115
MsG0180004568.01.T01 MTR_5g075640 34.031 191 113 3 1 178 226 416 2.06e-29 115
MsG0180004568.01.T01 MTR_1g014070 31.401 207 123 2 1 188 281 487 2.09e-29 115
MsG0180004568.01.T01 MTR_4g093850 39.103 156 76 2 1 138 336 490 4.63e-29 114
MsG0180004568.01.T01 MTR_5g015790 32.195 205 120 3 1 188 280 482 3.32e-28 112
MsG0180004568.01.T01 MTR_3g062540 30.472 233 147 4 1 218 218 450 6.28e-28 110
MsG0180004568.01.T01 MTR_3g062540 30.472 233 147 4 1 218 260 492 6.76e-28 111
MsG0180004568.01.T01 MTR_8g069330 31.579 247 119 6 1 210 268 501 3.85e-26 106
MsG0180004568.01.T01 MTR_4g074190 32.086 187 124 2 6 190 236 421 5.55e-26 105
MsG0180004568.01.T01 MTR_1g035720 32.973 185 122 2 6 190 278 460 6.24e-26 105
MsG0180004568.01.T01 MTR_4g074190 32.086 187 124 2 6 190 282 467 7.69e-26 105
MsG0180004568.01.T01 MTR_7g108290 27.803 223 132 4 1 194 281 503 1.31e-25 104
MsG0180004568.01.T01 MTR_4g045767 32.065 184 124 1 5 187 257 440 8.27e-25 102
MsG0180004568.01.T01 MTR_2g027410 32.995 197 113 3 1 187 204 391 1.45e-24 101
MsG0180004568.01.T01 MTR_2g027410 32.995 197 113 3 1 187 276 463 2.15e-24 101
MsG0180004568.01.T01 MTR_2g048390 34.395 157 84 3 1 138 296 452 1.75e-23 98.2
MsG0180004568.01.T01 MTR_2g010890 31.176 170 115 1 8 175 189 358 3.73e-21 91.3
MsG0180004568.01.T01 MTR_2g084595 30.921 152 91 1 1 138 294 445 1.74e-20 89.4
MsG0180004568.01.T01 MTR_8g078900 34.568 162 81 4 2 138 302 463 4.91e-19 85.5
MsG0180004568.01.T01 MTR_8g078900 34.568 162 81 4 2 138 262 423 4.96e-19 85.1
MsG0180004568.01.T01 MTR_4g074190 31.056 161 108 2 6 164 282 441 3.99e-17 79.7
MsG0180004568.01.T03 MTR_1g082690 96.689 151 4 1 32 181 53 203 4.95e-99 296
MsG0180004568.01.T03 MTR_4g093850 50.920 163 73 3 19 181 30 185 4.42e-50 169
MsG0180004568.01.T03 MTR_4g093850 50.920 163 73 3 19 181 30 185 1.43e-49 169
MsG0180004568.01.T03 MTR_2g009340 46.012 163 81 2 19 181 30 185 5.16e-48 166
MsG0180004568.01.T03 MTR_8g090220 47.917 144 73 1 38 181 53 194 1.65e-46 159
MsG0180004568.01.T03 MTR_8g090220 47.917 144 73 1 38 181 53 194 6.68e-46 159
MsG0180004568.01.T03 MTR_2g048390 46.528 144 75 1 38 181 27 168 2.99e-42 147
MsG0180004568.01.T03 MTR_1g094850 44.604 139 74 2 38 176 27 162 9.40e-37 134
MsG0180004568.01.T03 MTR_1g014070 42.361 144 80 1 38 181 28 168 2.06e-36 133
MsG0180004568.01.T03 MTR_5g015790 42.361 144 79 1 38 181 28 167 6.91e-35 129
MsG0180004568.01.T03 MTR_2g018750 41.250 160 86 4 23 181 16 168 5.16e-34 126
MsG0180004568.01.T03 MTR_1g106430 40.278 144 83 1 38 181 29 169 9.06e-34 125
MsG0180004568.01.T03 MTR_1g064360 37.107 159 94 3 23 181 16 168 5.55e-33 123
MsG0180004568.01.T03 MTR_8g069330 42.254 142 78 2 40 180 29 167 8.38e-33 123
MsG0180004568.01.T03 MTR_2g084595 34.969 163 101 2 19 181 9 166 2.92e-32 120
MsG0180004568.01.T03 MTR_4g095430 39.583 144 86 1 38 181 14 156 4.24e-32 121
MsG0180004568.01.T03 MTR_5g075640 38.194 144 86 2 38 181 26 166 6.35e-32 120
MsG0180004568.01.T03 MTR_2g084595 34.969 163 101 2 19 181 9 166 1.28e-31 120
MsG0180004568.01.T03 MTR_4g134210 35.664 143 89 1 38 180 27 166 4.89e-31 118
MsG0180004568.01.T03 MTR_8g078900 35.404 161 85 2 38 180 21 180 6.83e-31 117
MsG0180004568.01.T03 MTR_8g078900 35.404 161 85 2 38 180 21 180 1.89e-30 116
MsG0180004568.01.T03 MTR_4g022330 41.379 145 80 2 38 181 35 175 3.28e-30 115
MsG0180004568.01.T03 MTR_5g032780 37.580 157 95 2 27 181 14 169 3.60e-30 115
MsG0180004568.01.T03 MTR_5g016060 39.583 144 84 2 38 181 41 181 2.96e-29 113
MsG0180004568.01.T03 MTR_3g062540 37.500 144 83 2 38 179 25 163 3.25e-29 113
MsG0180004568.01.T03 MTR_2g027410 33.793 145 91 2 38 181 27 167 1.78e-28 110
MsG0180004568.01.T03 MTR_7g108290 38.621 145 84 2 38 181 37 177 6.32e-28 109
MsG0180004568.01.T03 MTR_7g073980 36.667 150 88 3 35 181 31 176 1.78e-27 108
MsG0180004568.01.T03 MTR_8g078900 36.000 150 77 2 49 180 2 150 3.89e-27 107
MsG0180004568.01.T03 MTR_1g088885 38.194 144 86 1 38 181 37 177 3.92e-27 107
MsG0180004568.01.T03 MTR_5g075640 39.200 125 73 2 57 181 2 123 1.46e-25 102
MsG0180004568.01.T03 MTR_8g078900 43.434 99 56 0 82 180 42 140 1.53e-24 99.0
MsG0180004568.01.T03 MTR_8g078900 43.434 99 56 0 82 180 42 140 3.15e-24 99.0
MsG0180004568.01.T03 MTR_3g062540 36.800 125 72 2 57 179 2 121 1.25e-22 94.4
MsG0180004568.01.T03 MTR_1g105870 33.333 132 87 1 44 175 38 168 9.85e-22 89.4
MsG0180004568.01.T03 MTR_2g027410 37.895 95 59 0 87 181 1 95 1.64e-21 90.9
MsG0180004568.01.T03 MTR_1g035720 33.065 124 74 4 40 161 6 122 1.31e-13 68.6
MsG0180004568.01.T03 MTR_4g074190 30.612 147 92 4 40 180 6 148 4.34e-13 66.6
MsG0180004568.01.T03 MTR_4g074190 30.612 147 92 4 40 180 6 148 5.04e-13 66.6
MsG0180004568.01.T03 MTR_4g074190 34.000 100 65 1 82 180 3 102 1.35e-12 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180004568.01.T02 AT5G64330 49.390 164 74 3 19 181 38 193 3.50e-51 174
MsG0180004568.01.T02 AT5G64330 49.390 164 74 3 19 181 38 193 8.40e-51 174
MsG0180004568.01.T02 AT5G64330 52.713 129 56 2 54 181 10 134 8.09e-42 148
MsG0180004568.01.T02 AT5G10250 41.401 157 86 2 25 181 42 192 9.87e-42 147
MsG0180004568.01.T02 AT5G10250 41.401 157 86 2 25 181 42 192 1.04e-41 148
MsG0180004568.01.T02 AT1G30440 46.528 144 76 1 38 181 27 169 8.59e-41 145
MsG0180004568.01.T02 AT5G03250 39.623 159 90 3 23 181 16 168 6.98e-37 134
MsG0180004568.01.T02 AT5G67440 39.583 144 87 0 38 181 28 171 3.21e-35 129
MsG0180004568.01.T02 AT5G67440 39.583 144 87 0 38 181 28 171 3.21e-35 129
MsG0180004568.01.T02 AT4G31820 41.259 143 81 1 39 181 29 168 4.64e-35 129
MsG0180004568.01.T02 AT3G08660 40.278 144 81 2 38 181 35 173 9.89e-32 118
MsG0180004568.01.T02 AT5G13600 41.358 162 85 5 22 181 15 168 2.44e-31 119
MsG0180004568.01.T02 AT3G08660 40.278 144 81 2 38 181 35 173 3.42e-31 118
MsG0180004568.01.T02 AT4G37590 36.842 152 88 1 38 181 28 179 6.27e-31 117
MsG0180004568.01.T02 AT5G67385 37.500 152 93 1 30 181 18 167 1.85e-30 116
MsG0180004568.01.T02 AT5G48800 40.690 145 81 2 38 181 42 182 2.44e-30 116
MsG0180004568.01.T02 AT2G30520 35.862 145 88 2 38 181 31 171 5.28e-30 115
MsG0180004568.01.T02 AT3G50840 38.194 144 87 2 38 181 17 158 5.34e-30 115
MsG0180004568.01.T02 AT3G26490 35.625 160 98 2 27 181 14 173 5.71e-30 114
MsG0180004568.01.T02 AT3G26490 35.625 160 98 2 27 181 14 173 6.58e-30 115
MsG0180004568.01.T02 AT3G26490 35.625 160 98 2 27 181 14 173 6.58e-30 115
MsG0180004568.01.T02 AT3G26490 35.625 160 98 2 27 181 14 173 6.58e-30 115
MsG0180004568.01.T02 AT3G08570 39.041 146 86 2 38 181 35 179 1.78e-29 114
MsG0180004568.01.T02 AT2G47860 39.860 143 80 1 39 181 39 175 1.92e-29 112
MsG0180004568.01.T02 AT2G47860 39.860 143 80 1 39 181 39 175 5.10e-29 112
MsG0180004568.01.T02 AT5G47800 30.539 167 108 3 18 180 4 166 9.46e-29 111
MsG0180004568.01.T02 AT5G47800 30.539 167 108 3 18 180 4 166 9.46e-29 111
MsG0180004568.01.T02 AT5G47800 30.539 167 108 3 18 180 4 166 9.46e-29 111
MsG0180004568.01.T02 AT5G47800 30.539 167 108 3 18 180 117 279 1.25e-28 111
MsG0180004568.01.T02 AT1G67900 36.111 144 86 1 38 181 27 164 3.35e-28 110
MsG0180004568.01.T02 AT1G67900 36.111 144 86 1 38 181 27 164 3.35e-28 110
MsG0180004568.01.T02 AT1G67900 36.111 144 86 1 38 181 27 164 3.35e-28 110
MsG0180004568.01.T02 AT1G67900 36.111 144 86 1 38 181 27 164 3.35e-28 110
MsG0180004568.01.T02 AT1G67900 36.111 144 86 1 38 181 27 164 3.35e-28 110
MsG0180004568.01.T02 AT1G67900 36.111 144 86 1 38 181 27 164 3.35e-28 110
MsG0180004568.01.T02 AT3G44820 34.591 159 100 1 23 181 13 167 5.88e-28 109
MsG0180004568.01.T02 AT5G66560 30.978 184 86 2 38 180 20 203 1.25e-27 108
MsG0180004568.01.T02 AT5G67440 36.923 130 82 0 52 181 5 134 2.10e-27 107
MsG0180004568.01.T02 AT5G66560 30.978 184 86 2 38 180 20 203 2.26e-27 108
MsG0180004568.01.T02 AT1G03010 39.583 144 81 1 38 181 37 174 1.00e-26 106
MsG0180004568.01.T02 AT1G03010 39.583 144 81 1 38 181 10 147 1.02e-26 106
MsG0180004568.01.T02 AT1G03010 39.583 144 81 1 38 181 36 173 1.07e-26 106
MsG0180004568.01.T02 AT4G31820 40.678 118 67 1 64 181 1 115 5.38e-26 103
MsG0180004568.01.T02 AT2G14820 36.111 144 89 1 38 181 28 168 1.45e-25 102
MsG0180004568.01.T02 AT2G14820 36.111 144 89 1 38 181 28 168 1.45e-25 102
MsG0180004568.01.T02 AT5G66560 30.636 173 79 2 49 180 2 174 7.99e-25 100
MsG0180004568.01.T02 AT2G47860 34.337 166 80 2 39 181 39 198 1.11e-24 99.8
MsG0180004568.01.T02 AT2G47860 34.337 166 80 2 39 181 39 198 1.67e-24 99.8
MsG0180004568.01.T02 AT3G08660 41.667 108 62 1 74 181 7 113 2.18e-24 99.4
MsG0180004568.01.T02 AT2G23050 36.957 138 84 2 46 181 36 172 3.34e-24 98.6
MsG0180004568.01.T02 AT3G49970 36.090 133 81 1 49 181 6 134 5.64e-24 98.2
MsG0180004568.01.T02 AT3G49970 36.090 133 81 1 49 181 6 134 5.64e-24 98.2
MsG0180004568.01.T02 AT5G66560 42.424 99 57 0 82 180 66 164 8.15e-24 97.8
MsG0180004568.01.T02 AT2G30520 35.714 126 76 2 57 181 2 123 3.84e-23 95.9
MsG0180004568.01.T02 AT2G30520 35.714 126 76 2 57 181 2 123 3.84e-23 95.9
MsG0180004568.01.T02 AT5G67385 37.903 124 75 1 58 181 1 122 5.10e-23 95.5
MsG0180004568.01.T02 AT5G67385 37.903 124 75 1 58 181 1 122 5.10e-23 95.5
MsG0180004568.01.T02 AT5G67385 37.903 124 75 1 58 181 1 122 5.10e-23 95.5
MsG0180004568.01.T02 AT5G67385 37.903 124 75 1 58 181 1 122 5.10e-23 95.5
MsG0180004568.01.T02 AT3G50840 37.097 124 76 2 58 181 1 122 1.63e-22 94.0
MsG0180004568.01.T02 AT3G50840 37.097 124 76 2 58 181 1 122 1.63e-22 94.0
MsG0180004568.01.T02 AT5G48130 37.857 140 78 3 43 181 45 176 1.65e-22 94.0
MsG0180004568.01.T02 AT3G19850 39.362 94 57 0 82 175 52 145 5.72e-17 78.2
MsG0180004568.01.T02 AT1G50280 34.028 144 91 3 36 175 2 145 1.08e-15 74.3
MsG0180004568.01.T02 AT1G50280 40.625 96 56 1 81 175 17 112 3.19e-15 73.2
MsG0180004568.01.T02 AT5G17580 34.400 125 78 1 35 159 3 123 8.33e-14 68.9
MsG0180004568.01.T02 AT5G17580 34.400 125 78 1 35 159 18 138 8.80e-14 68.9
MsG0180004568.01.T02 AT3G03510 43.284 67 38 0 94 160 8 74 8.91e-13 65.9
MsG0180004568.01.T01 AT5G64330 36.957 230 109 3 1 195 324 552 7.80e-43 152
MsG0180004568.01.T01 AT5G64330 36.087 230 111 3 1 195 383 611 1.91e-42 152
MsG0180004568.01.T01 AT5G64330 36.957 230 109 3 1 195 383 611 2.06e-42 152
MsG0180004568.01.T01 AT3G08660 34.008 247 134 3 1 218 200 446 1.19e-40 145
MsG0180004568.01.T01 AT3G08660 34.008 247 134 3 1 218 260 506 2.10e-40 145
MsG0180004568.01.T01 AT3G15570 36.410 195 119 3 1 191 117 310 5.77e-38 137
MsG0180004568.01.T01 AT5G10250 35.849 212 120 3 1 197 304 514 5.77e-38 139
MsG0180004568.01.T01 AT5G13600 32.569 218 129 3 1 200 292 509 1.58e-36 135
MsG0180004568.01.T01 AT3G44820 31.441 229 138 2 1 211 303 530 1.58e-36 135
MsG0180004568.01.T01 AT1G52770 35.897 195 120 3 1 191 112 305 2.06e-36 133
MsG0180004568.01.T01 AT5G03250 34.286 210 118 3 1 190 182 391 3.33e-36 133
MsG0180004568.01.T01 AT3G08570 35.545 211 116 2 7 197 288 498 6.11e-36 134
MsG0180004568.01.T01 AT5G10250 36.765 204 114 3 1 197 304 499 8.66e-36 133
MsG0180004568.01.T01 AT5G03250 34.286 210 118 3 1 190 294 503 9.71e-36 133
MsG0180004568.01.T01 AT5G66560 33.486 218 133 3 2 207 292 509 6.27e-34 128
MsG0180004568.01.T01 AT5G66560 33.486 218 133 3 2 207 302 519 7.57e-34 128
MsG0180004568.01.T01 AT5G66560 33.486 218 133 3 2 207 331 548 8.04e-34 128
MsG0180004568.01.T01 AT2G14820 33.333 225 120 3 1 200 277 496 1.39e-32 124
MsG0180004568.01.T01 AT2G14820 33.333 225 120 3 1 200 277 496 1.39e-32 124
MsG0180004568.01.T01 AT5G67385 34.673 199 117 5 1 187 275 472 2.29e-32 124
MsG0180004568.01.T01 AT5G67385 34.673 199 117 5 1 187 230 427 2.45e-32 123
MsG0180004568.01.T01 AT5G67385 34.673 199 117 5 1 187 230 427 2.45e-32 123
MsG0180004568.01.T01 AT5G67385 34.673 199 117 5 1 187 230 427 2.45e-32 123
MsG0180004568.01.T01 AT5G67385 34.673 199 117 5 1 187 230 427 2.45e-32 123
MsG0180004568.01.T01 AT1G30440 31.193 218 128 3 1 196 298 515 1.33e-31 122
MsG0180004568.01.T01 AT1G67900 32.794 247 127 3 3 210 284 530 1.41e-31 121
MsG0180004568.01.T01 AT1G67900 32.794 247 127 3 3 210 284 530 1.41e-31 121
MsG0180004568.01.T01 AT1G67900 32.794 247 127 3 3 210 284 530 1.41e-31 121
MsG0180004568.01.T01 AT1G67900 32.794 247 127 3 3 210 284 530 1.41e-31 121
MsG0180004568.01.T01 AT1G67900 32.794 247 127 3 3 210 284 530 1.41e-31 121
MsG0180004568.01.T01 AT1G67900 32.794 247 127 3 3 210 284 530 1.41e-31 121
MsG0180004568.01.T01 AT3G50840 33.708 178 116 2 14 190 248 424 8.17e-31 119
MsG0180004568.01.T01 AT3G50840 33.708 178 116 2 14 190 248 424 8.17e-31 119
MsG0180004568.01.T01 AT3G50840 33.708 178 116 2 14 190 284 460 9.18e-31 119
MsG0180004568.01.T01 AT5G48800 32.258 217 130 3 1 200 279 495 8.34e-30 116
MsG0180004568.01.T01 AT1G50280 30.088 226 138 4 8 228 247 457 1.35e-29 115
MsG0180004568.01.T01 AT1G50280 33.333 177 113 2 8 179 280 456 1.60e-29 115
MsG0180004568.01.T01 AT5G67440 32.178 202 125 3 1 191 241 441 3.09e-29 114
MsG0180004568.01.T01 AT5G67440 32.178 202 125 3 1 191 278 478 3.87e-29 114
MsG0180004568.01.T01 AT5G67440 32.178 202 125 3 1 191 278 478 3.87e-29 114
MsG0180004568.01.T01 AT2G23050 32.461 191 112 3 1 188 157 333 7.93e-29 111
MsG0180004568.01.T01 AT3G19850 33.708 178 114 2 6 179 278 455 8.62e-29 113
MsG0180004568.01.T01 AT2G30520 32.212 208 128 3 1 195 220 427 1.01e-28 113
MsG0180004568.01.T01 AT2G30520 32.212 208 128 3 1 195 220 427 1.01e-28 113
MsG0180004568.01.T01 AT2G30520 34.031 191 113 3 1 178 268 458 1.18e-28 113
MsG0180004568.01.T01 AT2G23050 32.461 191 112 3 1 188 273 449 3.10e-28 111
MsG0180004568.01.T01 AT1G03010 29.258 229 129 5 1 196 255 483 1.03e-27 110
MsG0180004568.01.T01 AT5G47800 30.952 210 133 3 1 198 276 485 1.11e-27 110
MsG0180004568.01.T01 AT5G47800 30.952 210 133 3 1 198 276 485 1.11e-27 110
MsG0180004568.01.T01 AT5G47800 30.952 210 133 3 1 198 276 485 1.11e-27 110
MsG0180004568.01.T01 AT1G03010 29.258 229 129 5 1 196 282 510 1.27e-27 110
MsG0180004568.01.T01 AT1G03010 29.258 229 129 5 1 196 281 509 1.32e-27 110
MsG0180004568.01.T01 AT5G47800 30.952 210 133 3 1 198 389 598 1.70e-27 110
MsG0180004568.01.T01 AT2G47860 27.888 251 146 4 1 221 160 405 2.18e-27 109
MsG0180004568.01.T01 AT2G47860 27.888 251 146 4 1 221 160 405 2.18e-27 109
MsG0180004568.01.T01 AT2G47860 27.888 251 146 4 1 221 301 546 2.39e-27 109
MsG0180004568.01.T01 AT2G47860 27.888 251 146 4 1 221 278 523 2.40e-27 109
MsG0180004568.01.T01 AT3G49970 33.514 185 113 4 1 181 223 401 3.04e-27 108
MsG0180004568.01.T01 AT3G49970 33.514 185 113 4 1 181 223 401 3.04e-27 108
MsG0180004568.01.T01 AT3G26490 28.689 244 136 3 1 208 283 524 4.59e-26 105
MsG0180004568.01.T01 AT3G26490 28.689 244 136 3 1 208 283 524 4.59e-26 105
MsG0180004568.01.T01 AT3G26490 28.689 244 136 3 1 208 283 524 4.59e-26 105
MsG0180004568.01.T01 AT4G31820 29.565 230 131 6 10 226 237 448 7.10e-24 99.8
MsG0180004568.01.T01 AT4G31820 29.565 230 131 6 10 226 290 501 8.03e-24 99.8
MsG0180004568.01.T01 AT4G37590 30.882 204 125 5 1 200 285 476 1.36e-23 99.0
MsG0180004568.01.T01 AT3G22104 30.588 170 116 1 5 174 178 345 2.46e-23 97.4
MsG0180004568.01.T01 AT3G22104 30.588 170 116 1 5 174 178 345 2.46e-23 97.4
MsG0180004568.01.T01 AT3G22104 30.588 170 116 1 5 174 178 345 2.46e-23 97.4
MsG0180004568.01.T01 AT3G22104 30.588 170 116 1 5 174 253 420 2.82e-23 97.8
MsG0180004568.01.T01 AT3G08660 33.544 158 87 2 1 140 260 417 4.17e-22 94.0
MsG0180004568.01.T01 AT5G66560 34.228 149 86 3 2 138 331 479 1.68e-18 84.0
MsG0180004568.01.T01 AT5G17580 27.941 204 138 4 1 195 260 463 9.16e-18 82.0
MsG0180004568.01.T01 AT5G17580 27.941 204 138 4 1 195 245 448 1.11e-17 81.6
MsG0180004568.01.T01 AT3G03510 29.082 196 130 4 1 190 170 362 1.39e-17 81.3
MsG0180004568.01.T01 AT3G26490 30.457 197 99 3 1 159 283 479 6.41e-17 79.3
MsG0180004568.01.T01 AT5G48130 33.663 101 67 0 89 189 369 469 1.79e-16 78.2
MsG0180004568.01.T01 AT2G47860 27.976 168 89 3 1 138 301 466 2.33e-13 68.9
MsG0180004568.01.T01 AT2G47860 28.571 168 88 4 1 138 278 443 2.88e-13 68.6
MsG0180004568.01.T03 AT5G64330 49.390 164 74 3 19 181 38 193 3.50e-51 174
MsG0180004568.01.T03 AT5G64330 49.390 164 74 3 19 181 38 193 8.40e-51 174
MsG0180004568.01.T03 AT5G64330 52.713 129 56 2 54 181 10 134 8.09e-42 148
MsG0180004568.01.T03 AT5G10250 41.401 157 86 2 25 181 42 192 9.87e-42 147
MsG0180004568.01.T03 AT5G10250 41.401 157 86 2 25 181 42 192 1.04e-41 148
MsG0180004568.01.T03 AT1G30440 46.528 144 76 1 38 181 27 169 8.59e-41 145
MsG0180004568.01.T03 AT5G03250 39.623 159 90 3 23 181 16 168 6.98e-37 134
MsG0180004568.01.T03 AT5G67440 39.583 144 87 0 38 181 28 171 3.21e-35 129
MsG0180004568.01.T03 AT5G67440 39.583 144 87 0 38 181 28 171 3.21e-35 129
MsG0180004568.01.T03 AT4G31820 41.259 143 81 1 39 181 29 168 4.64e-35 129
MsG0180004568.01.T03 AT3G08660 40.278 144 81 2 38 181 35 173 9.89e-32 118
MsG0180004568.01.T03 AT5G13600 41.358 162 85 5 22 181 15 168 2.44e-31 119
MsG0180004568.01.T03 AT3G08660 40.278 144 81 2 38 181 35 173 3.42e-31 118
MsG0180004568.01.T03 AT4G37590 36.842 152 88 1 38 181 28 179 6.27e-31 117
MsG0180004568.01.T03 AT5G67385 37.500 152 93 1 30 181 18 167 1.85e-30 116
MsG0180004568.01.T03 AT5G48800 40.690 145 81 2 38 181 42 182 2.44e-30 116
MsG0180004568.01.T03 AT2G30520 35.862 145 88 2 38 181 31 171 5.28e-30 115
MsG0180004568.01.T03 AT3G50840 38.194 144 87 2 38 181 17 158 5.34e-30 115
MsG0180004568.01.T03 AT3G26490 35.625 160 98 2 27 181 14 173 5.71e-30 114
MsG0180004568.01.T03 AT3G26490 35.625 160 98 2 27 181 14 173 6.58e-30 115
MsG0180004568.01.T03 AT3G26490 35.625 160 98 2 27 181 14 173 6.58e-30 115
MsG0180004568.01.T03 AT3G26490 35.625 160 98 2 27 181 14 173 6.58e-30 115
MsG0180004568.01.T03 AT3G08570 39.041 146 86 2 38 181 35 179 1.78e-29 114
MsG0180004568.01.T03 AT2G47860 39.860 143 80 1 39 181 39 175 1.92e-29 112
MsG0180004568.01.T03 AT2G47860 39.860 143 80 1 39 181 39 175 5.10e-29 112
MsG0180004568.01.T03 AT5G47800 30.539 167 108 3 18 180 4 166 9.46e-29 111
MsG0180004568.01.T03 AT5G47800 30.539 167 108 3 18 180 4 166 9.46e-29 111
MsG0180004568.01.T03 AT5G47800 30.539 167 108 3 18 180 4 166 9.46e-29 111
MsG0180004568.01.T03 AT5G47800 30.539 167 108 3 18 180 117 279 1.25e-28 111
MsG0180004568.01.T03 AT1G67900 36.111 144 86 1 38 181 27 164 3.35e-28 110
MsG0180004568.01.T03 AT1G67900 36.111 144 86 1 38 181 27 164 3.35e-28 110
MsG0180004568.01.T03 AT1G67900 36.111 144 86 1 38 181 27 164 3.35e-28 110
MsG0180004568.01.T03 AT1G67900 36.111 144 86 1 38 181 27 164 3.35e-28 110
MsG0180004568.01.T03 AT1G67900 36.111 144 86 1 38 181 27 164 3.35e-28 110
MsG0180004568.01.T03 AT1G67900 36.111 144 86 1 38 181 27 164 3.35e-28 110
MsG0180004568.01.T03 AT3G44820 34.591 159 100 1 23 181 13 167 5.88e-28 109
MsG0180004568.01.T03 AT5G66560 30.978 184 86 2 38 180 20 203 1.25e-27 108
MsG0180004568.01.T03 AT5G67440 36.923 130 82 0 52 181 5 134 2.10e-27 107
MsG0180004568.01.T03 AT5G66560 30.978 184 86 2 38 180 20 203 2.26e-27 108
MsG0180004568.01.T03 AT1G03010 39.583 144 81 1 38 181 37 174 1.00e-26 106
MsG0180004568.01.T03 AT1G03010 39.583 144 81 1 38 181 10 147 1.02e-26 106
MsG0180004568.01.T03 AT1G03010 39.583 144 81 1 38 181 36 173 1.07e-26 106
MsG0180004568.01.T03 AT4G31820 40.678 118 67 1 64 181 1 115 5.38e-26 103
MsG0180004568.01.T03 AT2G14820 36.111 144 89 1 38 181 28 168 1.45e-25 102
MsG0180004568.01.T03 AT2G14820 36.111 144 89 1 38 181 28 168 1.45e-25 102
MsG0180004568.01.T03 AT5G66560 30.636 173 79 2 49 180 2 174 7.99e-25 100
MsG0180004568.01.T03 AT2G47860 34.337 166 80 2 39 181 39 198 1.11e-24 99.8
MsG0180004568.01.T03 AT2G47860 34.337 166 80 2 39 181 39 198 1.67e-24 99.8
MsG0180004568.01.T03 AT3G08660 41.667 108 62 1 74 181 7 113 2.18e-24 99.4
MsG0180004568.01.T03 AT2G23050 36.957 138 84 2 46 181 36 172 3.34e-24 98.6
MsG0180004568.01.T03 AT3G49970 36.090 133 81 1 49 181 6 134 5.64e-24 98.2
MsG0180004568.01.T03 AT3G49970 36.090 133 81 1 49 181 6 134 5.64e-24 98.2
MsG0180004568.01.T03 AT5G66560 42.424 99 57 0 82 180 66 164 8.15e-24 97.8
MsG0180004568.01.T03 AT2G30520 35.714 126 76 2 57 181 2 123 3.84e-23 95.9
MsG0180004568.01.T03 AT2G30520 35.714 126 76 2 57 181 2 123 3.84e-23 95.9
MsG0180004568.01.T03 AT5G67385 37.903 124 75 1 58 181 1 122 5.10e-23 95.5
MsG0180004568.01.T03 AT5G67385 37.903 124 75 1 58 181 1 122 5.10e-23 95.5
MsG0180004568.01.T03 AT5G67385 37.903 124 75 1 58 181 1 122 5.10e-23 95.5
MsG0180004568.01.T03 AT5G67385 37.903 124 75 1 58 181 1 122 5.10e-23 95.5
MsG0180004568.01.T03 AT3G50840 37.097 124 76 2 58 181 1 122 1.63e-22 94.0
MsG0180004568.01.T03 AT3G50840 37.097 124 76 2 58 181 1 122 1.63e-22 94.0
MsG0180004568.01.T03 AT5G48130 37.857 140 78 3 43 181 45 176 1.65e-22 94.0
MsG0180004568.01.T03 AT3G19850 39.362 94 57 0 82 175 52 145 5.72e-17 78.2
MsG0180004568.01.T03 AT1G50280 34.028 144 91 3 36 175 2 145 1.08e-15 74.3
MsG0180004568.01.T03 AT1G50280 40.625 96 56 1 81 175 17 112 3.19e-15 73.2
MsG0180004568.01.T03 AT5G17580 34.400 125 78 1 35 159 3 123 8.33e-14 68.9
MsG0180004568.01.T03 AT5G17580 34.400 125 78 1 35 159 18 138 8.80e-14 68.9
MsG0180004568.01.T03 AT3G03510 43.284 67 38 0 94 160 8 74 8.91e-13 65.9

Find 53 sgRNAs with CRISPR-Local

Find 440 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAACTTTGGTTTCAAGTTT+TGG 0.204000 1:-79699096 None:intergenic
TTTGGCATTTCAAGTAATTC+TGG 0.239260 1:+79699571 MsG0180004568.01.T01:CDS
CACCTGGAAGATTGTCTATT+TGG 0.243866 1:-79698781 None:intergenic
TAGGTTCCTGTATAGAAAAT+TGG 0.294506 1:+79699217 MsG0180004568.01.T01:five_prime_UTR
TAGAAAATTGGACTACAAAA+TGG 0.300863 1:+79699229 MsG0180004568.01.T01:five_prime_UTR
ACATCATCCCTGCCTTTAAC+AGG 0.334023 1:-79699393 None:intergenic
CAAGAAGTGAATATTTGAAT+AGG 0.369741 1:+79698711 MsG0180004568.01.T01:five_prime_UTR
GTGTTGTGTTCAAGATCTTT+TGG 0.378460 1:+79699477 MsG0180004568.01.T01:CDS
ATCCAAATAGACAATCTTCC+AGG 0.378879 1:+79698779 MsG0180004568.01.T01:five_prime_UTR
TGAATAGGCTTGTCTTCAAA+AGG 0.388500 1:+79698726 MsG0180004568.01.T01:five_prime_UTR
TTGCAACTCCTTGGCCCAAT+GGG 0.401043 1:-79699026 None:intergenic
ATAGTTGCTGATTCTTAAAA+CGG 0.402881 1:+79697986 MsG0180004568.01.T01:five_prime_UTR
ATGTGTTTATGTGTCACATT+AGG 0.404324 1:-79699279 None:intergenic
CATATAATATTTCTTAGAAA+AGG 0.413259 1:-79697849 None:intergenic
ATAATATTAGTATTACCTTA+AGG 0.424716 1:-79699753 None:intergenic
GGTGCAAAAGTTCACATTGT+TGG 0.435022 1:+79699592 MsG0180004568.01.T01:CDS
TTGTGAATCAATTTCCCATT+GGG 0.436436 1:+79699012 MsG0180004568.01.T01:five_prime_UTR
GAATAGGCTTGTCTTCAAAA+GGG 0.459367 1:+79698727 MsG0180004568.01.T01:five_prime_UTR
TTGCTTCACCTGTTAAAGGC+AGG 0.466605 1:+79699385 MsG0180004568.01.T01:CDS
GCGACCGTGATTTAAAACTT+TGG 0.470742 1:-79699787 None:intergenic
CCACCAACAAGCATCAACTT+TGG 0.470843 1:-79699109 None:intergenic
AGTTCACATTGTTGGAAGGT+TGG 0.471593 1:+79699600 MsG0180004568.01.T01:CDS
ACAATATAATGAAGCTATGT+TGG 0.478289 1:-79698867 None:intergenic
AGCTATTGACATGTACCTTA+AGG 0.481147 1:+79699738 MsG0180004568.01.T01:CDS
AAACCAAAGTTGATGCTTGT+TGG 0.486085 1:+79699106 MsG0180004568.01.T01:five_prime_UTR
TTGTCAAATTCTGTTACGGT+TGG 0.488790 1:+79698825 MsG0180004568.01.T01:five_prime_UTR
TTTCACTAATTGCAACTCCT+TGG 0.490163 1:-79699035 None:intergenic
ATCAATTTCCCATTGGGCCA+AGG 0.494419 1:+79699018 MsG0180004568.01.T01:five_prime_UTR
CAAAAGTTCACATTGTTGGA+AGG 0.515215 1:+79699596 MsG0180004568.01.T01:CDS
TTAGTTGTCAAATTCTGTTA+CGG 0.519205 1:+79698821 MsG0180004568.01.T01:five_prime_UTR
GTTGTGAATCAATTTCCCAT+TGG 0.525573 1:+79699011 MsG0180004568.01.T01:five_prime_UTR
CCAAAGTTGATGCTTGTTGG+TGG 0.533979 1:+79699109 MsG0180004568.01.T01:five_prime_UTR
ATTGCAACTCCTTGGCCCAA+TGG 0.535933 1:-79699027 None:intergenic
GGAATGAAATCGGAGTTTGT+AGG 0.540139 1:+79699198 MsG0180004568.01.T01:five_prime_UTR
TGCTTCACCTGTTAAAGGCA+GGG 0.549299 1:+79699386 MsG0180004568.01.T01:CDS
GTTATCTATCACAAGTTGCA+AGG 0.555039 1:+79699629 MsG0180004568.01.T01:CDS
GCAACTATAGGAACATTAGC+TGG 0.557389 1:-79697971 None:intergenic
AATAGGCTTGTCTTCAAAAG+GGG 0.571861 1:+79698728 MsG0180004568.01.T01:five_prime_UTR
ATATTCACTTCTTGAGACCA+TGG 0.588159 1:-79698702 None:intergenic
TGGTTCTCTAAAATCACACT+TGG 0.591516 1:+79699249 MsG0180004568.01.T01:five_prime_UTR
ATTGTTGGAAGGTTGGTCGA+TGG 0.596431 1:+79699607 MsG0180004568.01.T01:CDS
ATGAGTGAAGATATTGAACA+AGG 0.613707 1:+79698908 MsG0180004568.01.T01:five_prime_UTR
GACTGTGAAAATGTCTTGAG+TGG 0.613781 1:+79697920 MsG0180004568.01.T01:five_prime_UTR
TTATCTATCACAAGTTGCAA+GGG 0.626529 1:+79699630 MsG0180004568.01.T01:CDS
GTGTGTGGTAGAGAGAAGAG+TGG 0.644175 1:+79699438 MsG0180004568.01.T01:CDS
ATGGTCGCTTTATCAACACT+AGG 0.647142 1:-79697887 None:intergenic
TCACAATCTCTAGCATTCTG+TGG 0.648897 1:-79699700 None:intergenic
TGTGAAAATGTCTTGAGTGG+AGG 0.655625 1:+79697923 MsG0180004568.01.T01:five_prime_UTR
TAATGTGACACATAAACACA+TGG 0.657785 1:+79699281 MsG0180004568.01.T01:five_prime_UTR
CAATCAAGAGTTGTTGTGTG+TGG 0.681127 1:+79699423 MsG0180004568.01.T01:CDS
CAAATAGACAATCTTCCAGG+TGG 0.711266 1:+79698782 MsG0180004568.01.T01:five_prime_UTR
TAGCTGGTAGAACAACACAT+CGG 0.769094 1:-79697955 None:intergenic
AAGGGATCAGAAGCTCACAG+TGG 0.808993 1:+79699648 MsG0180004568.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATATTAATAAAAATAA+TGG - Chr1:79695653-79695672 None:intergenic 0.0%
!! AACAATTTATCTTATATAAT+CGG - Chr1:79696663-79696682 None:intergenic 10.0%
!! TAAAAAATTCGAAAAAAATA+CGG + Chr1:79695208-79695227 MsG0180004568.01.T02:intron 10.0%
!! TACCAAAAATAATAATAATA+AGG - Chr1:79696330-79696349 None:intergenic 10.0%
!! TGATATATATCTTATAATAA+AGG - Chr1:79698223-79698242 None:intergenic 10.0%
!! TTTAATGATTTAGATTTAAA+CGG - Chr1:79696409-79696428 None:intergenic 10.0%
!!! AAAATATCCATTTTTTTTTT+AGG - Chr1:79694855-79694874 None:intergenic 10.0%
!!! AAATATCCATTTTTTTTTTA+GGG - Chr1:79694854-79694873 None:intergenic 10.0%
!!! CATTTATTTAATTTAAAATC+TGG + Chr1:79695995-79696014 MsG0180004568.01.T02:intron 10.0%
!!! TAATTTAAAAATTGATTTTC+TGG + Chr1:79695964-79695983 MsG0180004568.01.T02:intron 10.0%
!!! TCATTTATTTAATTTAAATC+TGG - Chr1:79695077-79695096 None:intergenic 10.0%
!! AAAAAATTCACAAAAATTCA+CGG - Chr1:79695700-79695719 None:intergenic 15.0%
!! AAAAATTTGACAAAAATTCA+TGG - Chr1:79695485-79695504 None:intergenic 15.0%
!! ATAACTAGATAAAATATGAT+AGG + Chr1:79697002-79697021 MsG0180004568.01.T02:intron 15.0%
!! ATAATATTAGTATTACCTTA+AGG - Chr1:79699756-79699775 None:intergenic 15.0%
!! ATTAAATAATGAAATTTCAC+GGG - Chr1:79696369-79696388 None:intergenic 15.0%
!! CAAAAAAATGAAATAAATTC+TGG - Chr1:79695546-79695565 None:intergenic 15.0%
!! CATATAATATTTCTTAGAAA+AGG - Chr1:79697852-79697871 None:intergenic 15.0%
!! CTTGAAATTTCATTATTATT+AGG + Chr1:79694778-79694797 MsG0180004568.01.T02:intron 15.0%
!! GATTAAATAATGAAATTTCA+CGG - Chr1:79696370-79696389 None:intergenic 15.0%
!!! AAAAAAAATGTCAAATTTTC+CGG - Chr1:79695251-79695270 None:intergenic 15.0%
!!! AAATATCCATTTTTTTTCTT+AGG + Chr1:79696254-79696273 MsG0180004568.01.T02:intron 15.0%
!!! AATATCCATTTTTTTTCTTA+GGG + Chr1:79696255-79696274 MsG0180004568.01.T02:intron 15.0%
!!! AATATCCATTTTTTTTTTAG+GGG - Chr1:79694853-79694872 None:intergenic 15.0%
!!! AGCCTTATTATTATTATTTT+TGG + Chr1:79696325-79696344 MsG0180004568.01.T02:intron 15.0%
!!! CTTTATTTTTCATCAATAAA+TGG + Chr1:79698489-79698508 MsG0180004568.01.T01:intron 15.0%
!!! GGAATTTTTTTTAAAAAATC+CGG + Chr1:79695229-79695248 MsG0180004568.01.T02:intron 15.0%
!!! TAGTAAAATATCTTAGTTTT+TGG + Chr1:79700834-79700853 MsG0180004568.01.T01:three_prime_UTR 15.0%
!!! TATGTTTTTCAAATTTTGTT+TGG + Chr1:79701270-79701289 MsG0180004568.01.T01:three_prime_UTR 15.0%
!!! TTTTCGTTTTTTAAAAAATC+TGG + Chr1:79695872-79695891 MsG0180004568.01.T02:intron 15.0%
!! AAATATGATTATCTCTAGTA+AGG - Chr1:79696837-79696856 None:intergenic 20.0%
!! AATAGGAAAAGATAATAAAC+AGG - Chr1:79697339-79697358 None:intergenic 20.0%
!! AATCTAATGCCTTAAAATTT+AGG - Chr1:79697095-79697114 None:intergenic 20.0%
!! AATGATTTAATCATACAAGT+TGG + Chr1:79698167-79698186 MsG0180004568.01.T01:five_prime_UTR 20.0%
!! AGAAGTTATTAGGAAAATAA+AGG - Chr1:79701729-79701748 None:intergenic 20.0%
!! AGACAAATGCAAAAAAAATA+TGG - Chr1:79700201-79700220 None:intergenic 20.0%
!! ATCAACAATAATACATGTTA+TGG - Chr1:79698635-79698654 None:intergenic 20.0%
!! ATGGAAACATATTTAAATTC+TGG - Chr1:79695611-79695630 None:intergenic 20.0%
!! ATTGATGAAAAATAAAGACA+GGG - Chr1:79698486-79698505 None:intergenic 20.0%
!! ATTTAGTTATATATCACCAT+TGG + Chr1:79698283-79698302 MsG0180004568.01.T01:intron 20.0%
!! ATTTGGTATATTTCTTCTTT+AGG + Chr1:79695405-79695424 MsG0180004568.01.T02:intron 20.0%
!! CAAATAGATTCAAAATTTGA+GGG - Chr1:79696544-79696563 None:intergenic 20.0%
!! CACATGTATTTATCATTTAA+TGG + Chr1:79696475-79696494 MsG0180004568.01.T02:intron 20.0%
!! TAAGTATTTATTTATCAAGC+TGG - Chr1:79698095-79698114 None:intergenic 20.0%
!! TAATTAATTAATTACACACG+TGG + Chr1:79696164-79696183 MsG0180004568.01.T02:intron 20.0%
!! TAATTAATTAATTACACACG+TGG - Chr1:79696183-79696164 None:intergenic 20.0%
!! TATTGATGAAAAATAAAGAC+AGG - Chr1:79698487-79698506 None:intergenic 20.0%
!! TCTAAAAATAACAAGACAAA+TGG + Chr1:79697239-79697258 MsG0180004568.01.T02:intron 20.0%
!! TTAAAACTTCGATAAAATCA+CGG - Chr1:79699998-79700017 None:intergenic 20.0%
!! TTAAATGATAAATACATGTG+AGG - Chr1:79696475-79696494 None:intergenic 20.0%
!! TTATGCATTTAAGCAAATAA+AGG + Chr1:79697381-79697400 MsG0180004568.01.T02:intron 20.0%
!! TTGAAAATTTGACATTCTAA+AGG + Chr1:79695323-79695342 MsG0180004568.01.T02:intron 20.0%
!! TTTGGTATATTTCTTCTTTA+GGG + Chr1:79695406-79695425 MsG0180004568.01.T02:intron 20.0%
!!! AAAAAACGTACATTTTTACT+TGG - Chr1:79700872-79700891 None:intergenic 20.0%
!!! AAACAAAGTTTTGAAGAAAA+TGG - Chr1:79701652-79701671 None:intergenic 20.0%
!!! AAATTTTGAATCTATTTGGT+TGG + Chr1:79696546-79696565 MsG0180004568.01.T02:intron 20.0%
!!! AAGTAAAAATGTACGTTTTT+TGG + Chr1:79700871-79700890 MsG0180004568.01.T01:three_prime_UTR 20.0%
!!! ACATTTCAACCTAAATTTTA+AGG + Chr1:79697083-79697102 MsG0180004568.01.T02:intron 20.0%
!!! AGTTTTGAGTTGTATTTATA+AGG - Chr1:79701886-79701905 None:intergenic 20.0%
!!! AGTTTTGCTTTATATATTTC+TGG - Chr1:79701386-79701405 None:intergenic 20.0%
!!! ATATCCATTTTTTTTCTTAG+GGG + Chr1:79696256-79696275 MsG0180004568.01.T02:intron 20.0%
!!! ATATCCATTTTTTTTTTAGG+GGG - Chr1:79694852-79694871 None:intergenic 20.0%
!!! ATTATTTAAGATCCTTAACT+AGG - Chr1:79702896-79702915 None:intergenic 20.0%
!!! ATTATTTTTGGTACAAAAGA+GGG + Chr1:79696337-79696356 MsG0180004568.01.T02:intron 20.0%
!!! ATTTTCTTCAAAACTTTGTT+TGG + Chr1:79701651-79701670 MsG0180004568.01.T01:three_prime_UTR 20.0%
!!! CTTTAAGATTAGAAGTTATT+AGG - Chr1:79701739-79701758 None:intergenic 20.0%
!!! GATGATTTTGATATAAAGAA+TGG - Chr1:79702252-79702271 None:intergenic 20.0%
!!! GGATCTTTTATTTGTATTAT+GGG + Chr1:79702986-79703005 MsG0180004568.01.T01:three_prime_UTR 20.0%
!!! TATAGCTTTTGTTAAAATCA+TGG + Chr1:79700020-79700039 MsG0180004568.01.T01:intron 20.0%
!!! TATTATTTTTGGTACAAAAG+AGG + Chr1:79696336-79696355 MsG0180004568.01.T02:intron 20.0%
!!! TGATTTTAATTACTAGTCAA+CGG - Chr1:79700966-79700985 None:intergenic 20.0%
!!! TGTTATTTTTAGAGCAAAAT+AGG - Chr1:79697232-79697251 None:intergenic 20.0%
!!! TGTTTAATCTAGAATGTTAA+AGG + Chr1:79702916-79702935 MsG0180004568.01.T01:three_prime_UTR 20.0%
!!! TTAAAATTTAGGTTGAAATG+TGG - Chr1:79697084-79697103 None:intergenic 20.0%
!!! TTAACTTTAAATGATGATGA+AGG - Chr1:79702484-79702503 None:intergenic 20.0%
!!! TTTTATGAAATATGCTAAGA+AGG + Chr1:79702363-79702382 MsG0180004568.01.T01:intron 20.0%
! AAAAGAGAAACAAAACATAG+GGG + Chr1:79696227-79696246 MsG0180004568.01.T02:intron 25.0%
! AAAATAATGGTCTGAAGAAA+AGG - Chr1:79702175-79702194 None:intergenic 25.0%
! AAAATATGATAGGACACTAA+TGG + Chr1:79697012-79697031 MsG0180004568.01.T02:intron 25.0%
! AAGAAAAGCTCTATATGTTA+AGG - Chr1:79700648-79700667 None:intergenic 25.0%
! AAGACTCTTAGTTGTATTAT+GGG + Chr1:79702965-79702984 MsG0180004568.01.T01:three_prime_UTR 25.0%
! ACAATATAATGAAGCTATGT+TGG - Chr1:79698870-79698889 None:intergenic 25.0%
! AGAAACATGTGAATATAGTA+AGG + Chr1:79701701-79701720 MsG0180004568.01.T01:three_prime_UTR 25.0%
! ATACATGTGAGGAATTAAAT+AGG - Chr1:79696464-79696483 None:intergenic 25.0%
! ATCAAACTTATATCTACAAC+CGG - Chr1:79696724-79696743 None:intergenic 25.0%
! ATCAATATTAATGTAGTACG+TGG - Chr1:79697744-79697763 None:intergenic 25.0%
! ATTAGTTAATTTAACTCGAG+TGG - Chr1:79696945-79696964 None:intergenic 25.0%
! CAAAAGAGAAACAAAACATA+GGG + Chr1:79696226-79696245 MsG0180004568.01.T02:intron 25.0%
! CAAAAGAGAAACAAAACATA+GGG - Chr1:79696245-79696226 None:intergenic 25.0%
! CAAGAAGTGAATATTTGAAT+AGG + Chr1:79698711-79698730 MsG0180004568.01.T01:five_prime_UTR 25.0%
! CATTTAAAAGTCTAAACGAT+CGG + Chr1:79701230-79701249 MsG0180004568.01.T01:three_prime_UTR 25.0%
! CATTTGTCTCTATGATTATA+CGG + Chr1:79700212-79700231 MsG0180004568.01.T01:intron 25.0%
! CCAAATAGATTCAAAATTTG+AGG - Chr1:79696545-79696564 None:intergenic 25.0%
! CTATATATAGACAGAAAAAG+TGG - Chr1:79697787-79697806 None:intergenic 25.0%
! GAAAATTCTGTAAAAGATTC+TGG - Chr1:79695298-79695317 None:intergenic 25.0%
! GAAGAAATATACCAAATTTG+TGG - Chr1:79695402-79695421 None:intergenic 25.0%
! GAATGACTATATGAAATCTA+AGG + Chr1:79701447-79701466 MsG0180004568.01.T01:three_prime_UTR 25.0%
! GTATTTATCATTTAATGGCT+AGG + Chr1:79696480-79696499 MsG0180004568.01.T02:intron 25.0%
! GTTATGGTATGATTGAAATT+AGG - Chr1:79698619-79698638 None:intergenic 25.0%
! GTTTCAATAATGACATGTTT+GGG - Chr1:79698043-79698062 None:intergenic 25.0%
! TAAAACGGAAAAATCAAAAC+TGG + Chr1:79698001-79698020 MsG0180004568.01.T01:five_prime_UTR 25.0%
! TAGAAAATTGGACTACAAAA+TGG + Chr1:79699229-79699248 MsG0180004568.01.T01:five_prime_UTR 25.0%
! TAGTTACTACTTCAATTGAA+GGG + Chr1:79700174-79700193 MsG0180004568.01.T01:intron 25.0%
! TATTCGAAAAAGTAATGTCA+TGG - Chr1:79695444-79695463 None:intergenic 25.0%
! TCAAAAGAGAAACAAAACAT+AGG + Chr1:79696225-79696244 MsG0180004568.01.T02:intron 25.0%
! TCAAAAGAGAAACAAAACAT+AGG - Chr1:79696244-79696225 None:intergenic 25.0%
! TCGATCTCAATTCAAATTAA+TGG + Chr1:79696682-79696701 MsG0180004568.01.T02:intron 25.0%
! TGATCATACTATCTAAAAGA+TGG + Chr1:79697760-79697779 MsG0180004568.01.T02:intron 25.0%
! TGTAGTTAGTGGAATTAATA+TGG - Chr1:79697644-79697663 None:intergenic 25.0%
! TGTTTCAATAATGACATGTT+TGG - Chr1:79698044-79698063 None:intergenic 25.0%
! TTAAACTTAACTCAATTTGC+AGG + Chr1:79700253-79700272 MsG0180004568.01.T01:intron 25.0%
! TTAAATGCATAATCTGTGTT+TGG - Chr1:79697373-79697392 None:intergenic 25.0%
! TTAATCATAACATCAACCAT+AGG + Chr1:79697179-79697198 MsG0180004568.01.T02:intron 25.0%
! TTAGTTACTACTTCAATTGA+AGG + Chr1:79700173-79700192 MsG0180004568.01.T01:intron 25.0%
! TTAGTTGTCAAATTCTGTTA+CGG + Chr1:79698821-79698840 MsG0180004568.01.T01:five_prime_UTR 25.0%
! TTCAAAATGAAAACTAGCAT+AGG + Chr1:79700706-79700725 MsG0180004568.01.T01:three_prime_UTR 25.0%
!! AATGGCATAAAATACACTTT+TGG + Chr1:79700763-79700782 MsG0180004568.01.T01:three_prime_UTR 25.0%
!! AGTTTTCATTTTGAACTAAC+CGG - Chr1:79700701-79700720 None:intergenic 25.0%
!! CAACTAACTCAAATGTTTTA+CGG - Chr1:79698808-79698827 None:intergenic 25.0%
!! CCTCAAATTTTGAATCTATT+TGG + Chr1:79696542-79696561 MsG0180004568.01.T02:intron 25.0%
!! CTTTTCTAATGTTATCTTCA+TGG + Chr1:79698963-79698982 MsG0180004568.01.T01:five_prime_UTR 25.0%
!! GTAATATTGACTATCTACTA+GGG + Chr1:79697584-79697603 MsG0180004568.01.T02:intron 25.0%
!! GTGTTACAATCTTATGTTTT+TGG + Chr1:79699553-79699572 MsG0180004568.01.T01:CDS 25.0%
!! TATTTTGTACATAGTGTTTG+TGG - Chr1:79697712-79697731 None:intergenic 25.0%
!! TGTAATATTGACTATCTACT+AGG + Chr1:79697583-79697602 MsG0180004568.01.T02:intron 25.0%
!! TTGATTAACTAAACCCATTT+TGG + Chr1:79696739-79696758 MsG0180004568.01.T02:intron 25.0%
!! TTTAAATGATGATGAAGGAA+GGG - Chr1:79702479-79702498 None:intergenic 25.0%
!! TTTCTTAGAAAAGGTTTTAC+TGG - Chr1:79697843-79697862 None:intergenic 25.0%
!!! AAAACATACGTTGATAACAT+AGG + Chr1:79700933-79700952 MsG0180004568.01.T01:three_prime_UTR 25.0%
!!! AAATCCTGTTGATAATTTCA+TGG - Chr1:79700387-79700406 None:intergenic 25.0%
!!! AATCCTGTTGATAATTTCAT+GGG - Chr1:79700386-79700405 None:intergenic 25.0%
!!! ATAGTTGCTGATTCTTAAAA+CGG + Chr1:79697986-79698005 MsG0180004568.01.T01:five_prime_UTR 25.0%
!!! ATGGTAATTTTGATGCAAAA+GGG + Chr1:79701589-79701608 MsG0180004568.01.T01:three_prime_UTR 25.0%
!!! CATTTAGTCTTTGTTTTTGT+GGG - Chr1:79702550-79702569 None:intergenic 25.0%
!!! GGGATCTTTTATTTGTATTA+TGG + Chr1:79702985-79703004 MsG0180004568.01.T01:three_prime_UTR 25.0%
!!! GTATCCAAAGTTTTAAATCA+CGG + Chr1:79699783-79699802 MsG0180004568.01.T01:intron 25.0%
!!! TATCCATTTTTTTTCTTAGG+GGG + Chr1:79696257-79696276 MsG0180004568.01.T02:intron 25.0%
!!! TCAAGTTGTTTTTGTTGTAT+GGG + Chr1:79702307-79702326 MsG0180004568.01.T01:intron 25.0%
!!! TTCAAGTTGTTTTTGTTGTA+TGG + Chr1:79702306-79702325 MsG0180004568.01.T01:intron 25.0%
!!! TTTTAAGAATCAGCAACTAT+AGG - Chr1:79697986-79698005 None:intergenic 25.0%
!!! TTTTTCGAATAAGTGATTCT+TGG + Chr1:79695453-79695472 MsG0180004568.01.T02:intron 25.0%
AAAAGGGAATATAGTGACAA+TGG + Chr1:79701605-79701624 MsG0180004568.01.T01:three_prime_UTR 30.0%
AAAGAGAAACAAAACATAGG+GGG + Chr1:79696228-79696247 MsG0180004568.01.T02:intron 30.0%
AAAGTTCTTTATGGTGCTTT+GGG + Chr1:79702777-79702796 MsG0180004568.01.T01:three_prime_UTR 30.0%
AAATGTGTAGTACTACTATG+TGG + Chr1:79697553-79697572 MsG0180004568.01.T02:intron 30.0%
AATCGGTCTCATATAGTTAA+TGG - Chr1:79696646-79696665 None:intergenic 30.0%
ACATGACACAAAATGGAAAA+AGG + Chr1:79697667-79697686 MsG0180004568.01.T02:intron 30.0%
AGATTATAGACACAAACAGA+TGG - Chr1:79698402-79698421 None:intergenic 30.0%
AGCATGTGATGAAAAATGAT+AGG + Chr1:79700357-79700376 MsG0180004568.01.T01:CDS 30.0%
ATGAGTGAAGATATTGAACA+AGG + Chr1:79698908-79698927 MsG0180004568.01.T01:five_prime_UTR 30.0%
ATGGGAATTGAAGTTGAATT+TGG + Chr1:79694614-79694633 MsG0180004568.01.T02:CDS 30.0%
ATGTCTCATTTACTTGATTC+AGG + Chr1:79698123-79698142 MsG0180004568.01.T01:intron 30.0%
ATGTGTTTATGTGTCACATT+AGG - Chr1:79699282-79699301 None:intergenic 30.0%
ATTATTACTTTGGTACAGCT+TGG + Chr1:79697496-79697515 MsG0180004568.01.T02:intron 30.0%
ATTCAATCTGTCAAAAAACG+TGG + Chr1:79699177-79699196 MsG0180004568.01.T01:five_prime_UTR 30.0%
ATTTCCAAACACTTCCAAAA+TGG - Chr1:79696756-79696775 None:intergenic 30.0%
CAAAAAACGTGGAATGAAAT+CGG + Chr1:79699188-79699207 MsG0180004568.01.T01:five_prime_UTR 30.0%
CAAGACTCTTAGTTGTATTA+TGG + Chr1:79702964-79702983 MsG0180004568.01.T01:three_prime_UTR 30.0%
CAAGTGATTTCGATAATAGA+TGG - Chr1:79701768-79701787 None:intergenic 30.0%
CATCTATTATCGAAATCACT+TGG + Chr1:79701766-79701785 MsG0180004568.01.T01:intron 30.0%
CCAAACATGCACTTAAAAAA+AGG - Chr1:79699942-79699961 None:intergenic 30.0%
CCACAAAAACAAAGACTAAA+TGG + Chr1:79702548-79702567 MsG0180004568.01.T01:three_prime_UTR 30.0%
CTATCTTCTTCTGTCAAATA+TGG - Chr1:79700284-79700303 None:intergenic 30.0%
CTATGAGTTTAGCATAATCA+TGG - Chr1:79700053-79700072 None:intergenic 30.0%
CTATGTACAAAATAATCAGC+AGG + Chr1:79697718-79697737 MsG0180004568.01.T02:intron 30.0%
CTATTGTCCAAAGTTCTTTA+TGG + Chr1:79702768-79702787 MsG0180004568.01.T01:three_prime_UTR 30.0%
CTTTAAATTTCCAACTCCTA+TGG - Chr1:79697198-79697217 None:intergenic 30.0%
GAACACTAACTGCAAAATAA+TGG - Chr1:79702188-79702207 None:intergenic 30.0%
GAATAAGTGATTCTTGGAAT+TGG + Chr1:79695459-79695478 MsG0180004568.01.T02:intron 30.0%
GGGATGAGTTATTATTACTT+TGG + Chr1:79697486-79697505 MsG0180004568.01.T02:intron 30.0%
GTAAAGGATCAAATTACCAA+AGG + Chr1:79700447-79700466 MsG0180004568.01.T01:CDS 30.0%
GTTTGGATCAACAATTAGTT+TGG + Chr1:79699956-79699975 MsG0180004568.01.T01:intron 30.0%
GTTTGGATGATGAAAGAAAT+AGG - Chr1:79697356-79697375 None:intergenic 30.0%
TAAAGACAGGGAATGAATAT+TGG - Chr1:79698474-79698493 None:intergenic 30.0%
TAATGTGACACATAAACACA+TGG + Chr1:79699281-79699300 MsG0180004568.01.T01:five_prime_UTR 30.0%
TAGAACAAAGAAACCAAGAA+AGG + Chr1:79694740-79694759 MsG0180004568.01.T02:intron 30.0%
TAGGTTCCTGTATAGAAAAT+TGG + Chr1:79699217-79699236 MsG0180004568.01.T01:five_prime_UTR 30.0%
TGATTGAAATTAGGAACATG+AGG - Chr1:79698610-79698629 None:intergenic 30.0%
TGCAAAATCACTAAAAGCAA+TGG - Chr1:79698309-79698328 None:intergenic 30.0%
TGTCTCGTTACATTAAAAAG+CGG + Chr1:79702716-79702735 MsG0180004568.01.T01:three_prime_UTR 30.0%
TTAACTAGTGTTCCTAGTTA+AGG + Chr1:79702881-79702900 MsG0180004568.01.T01:three_prime_UTR 30.0%
TTATCTATCACAAGTTGCAA+GGG + Chr1:79699630-79699649 MsG0180004568.01.T01:CDS 30.0%
TTATTACTTTGGTACAGCTT+GGG + Chr1:79697497-79697516 MsG0180004568.01.T02:intron 30.0%
TTGAAGTTGAATTTGGAGAT+TGG + Chr1:79694621-79694640 MsG0180004568.01.T02:CDS 30.0%
TTGAATTTGGAGATTGGAAT+TGG + Chr1:79694627-79694646 MsG0180004568.01.T02:CDS 30.0%
TTGTGAATCAATTTCCCATT+GGG + Chr1:79699012-79699031 MsG0180004568.01.T01:five_prime_UTR 30.0%
TTTCCAAACACTTCCAAAAT+GGG - Chr1:79696755-79696774 None:intergenic 30.0%
! AGAAAGTGTGTGTAATGTAT+TGG + Chr1:79700304-79700323 MsG0180004568.01.T01:CDS 30.0%
! AGCTTTTGTTAAAATCATGG+TGG + Chr1:79700023-79700042 MsG0180004568.01.T01:intron 30.0%
! ATAAGGCTTAAATGCACTTT+TGG - Chr1:79696313-79696332 None:intergenic 30.0%
! ATCGCAACTATTTGAAACAT+AGG + Chr1:79696284-79696303 MsG0180004568.01.T02:intron 30.0%
! ATGTGGTATTCCTAAACTTT+TGG - Chr1:79697067-79697086 None:intergenic 30.0%
! CGATCGTTTAGACTTTTAAA+TGG - Chr1:79701232-79701251 None:intergenic 30.0%
! CTTTAAATGATGATGAAGGA+AGG - Chr1:79702480-79702499 None:intergenic 30.0%
! GCAACTATTTGAAACATAGA+GGG - Chr1:79694821-79694840 None:intergenic 30.0%
! GTTTCAAATAGTTGCGATTT+TGG + Chr1:79694826-79694845 MsG0180004568.01.T02:intron 30.0%
! TCGCAACTATTTGAAACATA+GGG + Chr1:79696285-79696304 MsG0180004568.01.T02:intron 30.0%
! TGTAGTCCAATTTTCTATAC+AGG - Chr1:79699226-79699245 None:intergenic 30.0%
! TTAACAAGAAGTGCAAAGAT+TGG - Chr1:79701933-79701952 None:intergenic 30.0%
! TTCACAGTCAAGAATTTTCA+TGG - Chr1:79697909-79697928 None:intergenic 30.0%
! TTTAAGACCACCAAAAGTTT+AGG + Chr1:79697054-79697073 MsG0180004568.01.T02:intron 30.0%
!! ATATCTACAACCGGTTTTAA+AGG - Chr1:79696715-79696734 None:intergenic 30.0%
!! CAAAGATTTTGAAAACAGAC+AGG + Chr1:79700493-79700512 MsG0180004568.01.T01:CDS 30.0%
!! GATCTTTTGGTTAAGAATCA+AGG + Chr1:79699490-79699509 MsG0180004568.01.T01:CDS 30.0%
!! GATGGTAATTTTGATGCAAA+AGG + Chr1:79701588-79701607 MsG0180004568.01.T01:three_prime_UTR 30.0%
!! TGGTTGATATCCTTTAAAAC+CGG + Chr1:79696702-79696721 MsG0180004568.01.T02:intron 30.0%
!! TTTTAATTACTAGTCAACGG+TGG - Chr1:79700963-79700982 None:intergenic 30.0%
!!! ACGTTTTTTCTTAATCAACG+AGG - Chr1:79696900-79696919 None:intergenic 30.0%
!!! ATTTTGGAAGTGTTTGGAAA+TGG + Chr1:79696755-79696774 MsG0180004568.01.T02:intron 30.0%
!!! CCATTTAGTCTTTGTTTTTG+TGG - Chr1:79702551-79702570 None:intergenic 30.0%
!!! CCTTTTTTTAAGTGCATGTT+TGG + Chr1:79699939-79699958 MsG0180004568.01.T01:intron 30.0%
!!! GAATCAATTTTGGTTAAGGT+GGG + Chr1:79697466-79697485 MsG0180004568.01.T02:intron 30.0%
!!! TCAACTTTGGTTTCAAGTTT+TGG - Chr1:79699099-79699118 None:intergenic 30.0%
!!! TTTTGGAAGTGTTTGGAAAT+GGG + Chr1:79696756-79696775 MsG0180004568.01.T02:intron 30.0%
!!! TTTTTTGCTTCACCTGTTAA+AGG + Chr1:79699381-79699400 MsG0180004568.01.T01:CDS 30.0%
AACTTACCCTTCATGCATTA+CGG - Chr1:79702108-79702127 None:intergenic 35.0%
AATAGGCTTGTCTTCAAAAG+GGG + Chr1:79698728-79698747 MsG0180004568.01.T01:five_prime_UTR 35.0%
ACTCGCATCATCAATAATCA+TGG - Chr1:79697147-79697166 None:intergenic 35.0%
AGAATTTGAGAGTAGACAGA+TGG - Chr1:79697621-79697640 None:intergenic 35.0%
AGATTCAAAATTTGAGGGAC+TGG - Chr1:79696539-79696558 None:intergenic 35.0%
AGCTATTGACATGTACCTTA+AGG + Chr1:79699738-79699757 MsG0180004568.01.T01:CDS 35.0%
AGGATTGAGTCTAACGAAAA+GGG - Chr1:79696880-79696899 None:intergenic 35.0%
AGTAATTATCGACCGTTCTA+GGG + Chr1:79702043-79702062 MsG0180004568.01.T01:intron 35.0%
ATAACATCAACCATAGGAGT+TGG + Chr1:79697185-79697204 MsG0180004568.01.T02:intron 35.0%
ATACAACTTGGCCACAAATT+TGG + Chr1:79695388-79695407 MsG0180004568.01.T02:intron 35.0%
ATATTCACTTCTTGAGACCA+TGG - Chr1:79698705-79698724 None:intergenic 35.0%
ATCCAAATAGACAATCTTCC+AGG + Chr1:79698779-79698798 MsG0180004568.01.T01:five_prime_UTR 35.0%
CAAAAGTTCACATTGTTGGA+AGG + Chr1:79699596-79699615 MsG0180004568.01.T01:CDS 35.0%
CAAAGTTCTTTATGGTGCTT+TGG + Chr1:79702776-79702795 MsG0180004568.01.T01:three_prime_UTR 35.0%
CATAGAATCACTGACATATG+TGG + Chr1:79699835-79699854 MsG0180004568.01.T01:intron 35.0%
CGTGGATAAATATTCAACGA+CGG + Chr1:79701138-79701157 MsG0180004568.01.T01:three_prime_UTR 35.0%
CTGTGAATGTTAAAGAGGAA+TGG + Chr1:79700745-79700764 MsG0180004568.01.T01:three_prime_UTR 35.0%
CTTTGTTCTACTCTAGCTAA+CGG - Chr1:79694730-79694749 None:intergenic 35.0%
GAATAGGCTTGTCTTCAAAA+GGG + Chr1:79698727-79698746 MsG0180004568.01.T01:five_prime_UTR 35.0%
GACACTTTGTCTTTAGTATC+TGG - Chr1:79702649-79702668 None:intergenic 35.0%
GAGATTGGAATTGGAATTGA+AGG + Chr1:79694636-79694655 MsG0180004568.01.T02:CDS 35.0%
GGAAACACCTTAATTGATGA+AGG + Chr1:79697518-79697537 MsG0180004568.01.T02:intron 35.0%
GTGGATAAATATTCAACGAC+GGG + Chr1:79701139-79701158 MsG0180004568.01.T01:three_prime_UTR 35.0%
GTTATCTATCACAAGTTGCA+AGG + Chr1:79699629-79699648 MsG0180004568.01.T01:CDS 35.0%
GTTGTGAATCAATTTCCCAT+TGG + Chr1:79699011-79699030 MsG0180004568.01.T01:five_prime_UTR 35.0%
TACACTGACATGACACAAAA+TGG + Chr1:79697660-79697679 MsG0180004568.01.T02:intron 35.0%
TAGAACAAGTGAACATGTCA+TGG + Chr1:79700414-79700433 MsG0180004568.01.T01:CDS 35.0%
TAGAACGGTCGATAATTACT+GGG - Chr1:79702043-79702062 None:intergenic 35.0%
TCAATAATGACATGTTTGGG+AGG - Chr1:79698040-79698059 None:intergenic 35.0%
TCCTCTTTAACATTCACAGA+AGG - Chr1:79700744-79700763 None:intergenic 35.0%
TCCTTCTGTGAATGTTAAAG+AGG + Chr1:79700740-79700759 MsG0180004568.01.T01:three_prime_UTR 35.0%
TCTCAGCCATTAATTCAGAT+CGG - Chr1:79696622-79696641 None:intergenic 35.0%
TGAATAGGCTTGTCTTCAAA+AGG + Chr1:79698726-79698745 MsG0180004568.01.T01:five_prime_UTR 35.0%
TGGAATTGGAATTGAAGGAA+GGG + Chr1:79694641-79694660 MsG0180004568.01.T02:CDS 35.0%
TTCCTGACCACAAAATCTTA+AGG + Chr1:79697440-79697459 MsG0180004568.01.T02:intron 35.0%
TTGAATCTATTTGGTTGGCA+CGG + Chr1:79696551-79696570 MsG0180004568.01.T02:intron 35.0%
TTGATATGCCTTAGGAAACA+CGG + Chr1:79702126-79702145 MsG0180004568.01.T01:intron 35.0%
TTGCCCATGAAATTATCAAC+AGG + Chr1:79700380-79700399 MsG0180004568.01.T01:CDS 35.0%
TTGCCCCCTAAGAAAAAAAA+TGG - Chr1:79696263-79696282 None:intergenic 35.0%
TTGGAATTGGAATTGAAGGA+AGG + Chr1:79694640-79694659 MsG0180004568.01.T02:CDS 35.0%
TTGGCCCCCTAAAAAAAAAA+TGG + Chr1:79694845-79694864 MsG0180004568.01.T02:intron 35.0%
TTGTCAAATTCTGTTACGGT+TGG + Chr1:79698825-79698844 MsG0180004568.01.T01:five_prime_UTR 35.0%
TTGTCTTTAGTATCTGGAGA+AGG - Chr1:79702643-79702662 None:intergenic 35.0%
TTTCACTAATTGCAACTCCT+TGG - Chr1:79699038-79699057 None:intergenic 35.0%
TTTGAAAACAGACAGGAATC+AGG + Chr1:79700500-79700519 MsG0180004568.01.T01:CDS 35.0%
! ACATGTTCACTTGTTCTAGA+AGG - Chr1:79700412-79700431 None:intergenic 35.0%
! ATTCCAGCCTTAAGATTTTG+TGG - Chr1:79697450-79697469 None:intergenic 35.0%
! CAAAGCACCATAAAGAACTT+TGG - Chr1:79702778-79702797 None:intergenic 35.0%
! CGCAACTATTTGAAACATAG+AGG - Chr1:79696305-79696286 None:intergenic 35.0%
! CGCAACTATTTGAAACATAG+GGG + Chr1:79696286-79696305 MsG0180004568.01.T02:intron 35.0%
! CTTAAGGCTGGAATCAATTT+TGG + Chr1:79697456-79697475 MsG0180004568.01.T02:intron 35.0%
! GAGACAGAATTTTCTTCAGT+TGG - Chr1:79699355-79699374 None:intergenic 35.0%
! GCAACTATTTGAAACATAGG+GGG + Chr1:79696287-79696306 MsG0180004568.01.T02:intron 35.0%
! GTGTTGTGTTCAAGATCTTT+TGG + Chr1:79699477-79699496 MsG0180004568.01.T01:CDS 35.0%
! TACTTCGAGTTCTATTTGTG+TGG + Chr1:79700139-79700158 MsG0180004568.01.T01:intron 35.0%
! TAGGAACATGAGGTACTTAT+TGG - Chr1:79698600-79698619 None:intergenic 35.0%
! TGGTATTCCTAAACTTTTGG+TGG - Chr1:79697064-79697083 None:intergenic 35.0%
!! AAACCAAAGTTGATGCTTGT+TGG + Chr1:79699106-79699125 MsG0180004568.01.T01:five_prime_UTR 35.0%
!! ACTATGTGTCACGTTGTTTT+AGG + Chr1:79702503-79702522 MsG0180004568.01.T01:intron 35.0%
!! TGGTTCTCTAAAATCACACT+TGG + Chr1:79699249-79699268 MsG0180004568.01.T01:five_prime_UTR 35.0%
!!! AAACCCATTTTGGAAGTGTT+TGG + Chr1:79696749-79696768 MsG0180004568.01.T02:intron 35.0%
!!! GCTGGAATCAATTTTGGTTA+AGG + Chr1:79697462-79697481 MsG0180004568.01.T02:intron 35.0%
!!! GGAATCAATTTTGGTTAAGG+TGG + Chr1:79697465-79697484 MsG0180004568.01.T02:intron 35.0%
!!! GTCACGTTGTTTTAGGTTTT+GGG + Chr1:79702510-79702529 MsG0180004568.01.T01:intron 35.0%
!!! TGTCACGTTGTTTTAGGTTT+TGG + Chr1:79702509-79702528 MsG0180004568.01.T01:intron 35.0%
AAAGGTTTGCGACTTTGACT+TGG - Chr1:79699924-79699943 None:intergenic 40.0%
AAATGGCTGCACATGTTAAG+TGG - Chr1:79701635-79701654 None:intergenic 40.0%
AACATTCACAGAAGGATGAG+AGG - Chr1:79700736-79700755 None:intergenic 40.0%
AAGGAGTAAGACAAGCATCA+AGG + Chr1:79700466-79700485 MsG0180004568.01.T01:CDS 40.0%
ACAACACAAGCAAACAATGG+CGG - Chr1:79694697-79694716 None:intergenic 40.0%
ACGCTTATGCTTGTATCTGA+TGG + Chr1:79702576-79702595 MsG0180004568.01.T01:three_prime_UTR 40.0%
AGAACGGTCGATAATTACTG+GGG - Chr1:79702042-79702061 None:intergenic 40.0%
AGATGACACATACGATGTCT+TGG + Chr1:79701562-79701581 MsG0180004568.01.T01:three_prime_UTR 40.0%
AGCACAACACAAGCAAACAA+TGG - Chr1:79694700-79694719 None:intergenic 40.0%
AGCCATTAATTCAGATCGGA+TGG - Chr1:79696618-79696637 None:intergenic 40.0%
AGTGAACATGTCATGGACAA+TGG + Chr1:79700421-79700440 MsG0180004568.01.T01:CDS 40.0%
AGTTCACATTGTTGGAAGGT+TGG + Chr1:79699600-79699619 MsG0180004568.01.T01:CDS 40.0%
ATGAAGGAAGGGAGAAGTAA+CGG - Chr1:79702468-79702487 None:intergenic 40.0%
CAAATAGACAATCTTCCAGG+TGG + Chr1:79698782-79698801 MsG0180004568.01.T01:five_prime_UTR 40.0%
CAATCAAGAGTTGTTGTGTG+TGG + Chr1:79699423-79699442 MsG0180004568.01.T01:CDS 40.0%
CACCTGGAAGATTGTCTATT+TGG - Chr1:79698784-79698803 None:intergenic 40.0%
CAGATCGCCTTCATCAATTA+AGG - Chr1:79697528-79697547 None:intergenic 40.0%
CAGTAATTATCGACCGTTCT+AGG + Chr1:79702042-79702061 MsG0180004568.01.T01:intron 40.0%
CGCTTATGCTTGTATCTGAT+GGG + Chr1:79702577-79702596 MsG0180004568.01.T01:three_prime_UTR 40.0%
CTAGAACGGTCGATAATTAC+TGG - Chr1:79702044-79702063 None:intergenic 40.0%
CTTAATTGATGAAGGCGATC+TGG + Chr1:79697526-79697545 MsG0180004568.01.T02:intron 40.0%
CTTTAGTATCTGGAGAAGGA+GGG - Chr1:79702639-79702658 None:intergenic 40.0%
GACCATCCGATCTGAATTAA+TGG + Chr1:79696613-79696632 MsG0180004568.01.T02:intron 40.0%
GACTGTGAAAATGTCTTGAG+TGG + Chr1:79697920-79697939 MsG0180004568.01.T01:five_prime_UTR 40.0%
GAGGATTGAGTCTAACGAAA+AGG - Chr1:79696881-79696900 None:intergenic 40.0%
GCAACTATAGGAACATTAGC+TGG - Chr1:79697974-79697993 None:intergenic 40.0%
GGAATGAAATCGGAGTTTGT+AGG + Chr1:79699198-79699217 MsG0180004568.01.T01:five_prime_UTR 40.0%
GGTGCAAAAGTTCACATTGT+TGG + Chr1:79699592-79699611 MsG0180004568.01.T01:CDS 40.0%
TACAAGTATGCCAAATGCAG+AGG - Chr1:79702815-79702834 None:intergenic 40.0%
TACTTGATTCAGGATTGCCA+GGG + Chr1:79698133-79698152 MsG0180004568.01.T01:intron 40.0%
TAGAATGTTAAAGGCCGTCT+CGG + Chr1:79702925-79702944 MsG0180004568.01.T01:three_prime_UTR 40.0%
TAGCTGGTAGAACAACACAT+CGG - Chr1:79697958-79697977 None:intergenic 40.0%
TCAACGAGGCTGATAAATAC+AGG - Chr1:79700676-79700695 None:intergenic 40.0%
TCACAATCTCTAGCATTCTG+TGG - Chr1:79699703-79699722 None:intergenic 40.0%
TCACTAAAAGCAATGGCCAA+TGG - Chr1:79698302-79698321 None:intergenic 40.0%
TCATGGACAATGGCAAGTAA+AGG + Chr1:79700431-79700450 MsG0180004568.01.T01:CDS 40.0%
TCTTTAGTATCTGGAGAAGG+AGG - Chr1:79702640-79702659 None:intergenic 40.0%
TGAAGAAGTGACACCTTTCT+TGG - Chr1:79694756-79694775 None:intergenic 40.0%
TGACCACAAAATCTTAAGGC+TGG + Chr1:79697444-79697463 MsG0180004568.01.T02:intron 40.0%
TGAGTGTATCGTTGTCTTGT+TGG + Chr1:79701065-79701084 MsG0180004568.01.T01:three_prime_UTR 40.0%
TGATGCTTGTCTTACTCCTT+TGG - Chr1:79700466-79700485 None:intergenic 40.0%
TGCTAAGAAGGAAATGAGTG+AGG + Chr1:79702375-79702394 MsG0180004568.01.T01:intron 40.0%
TGGAATTGAAGGAAGGGATT+GGG + Chr1:79694647-79694666 MsG0180004568.01.T02:CDS 40.0%
TGTACATAGTGTTTGTGGCA+TGG - Chr1:79697707-79697726 None:intergenic 40.0%
TGTCATGTCAGTGTAGTTAG+TGG - Chr1:79697655-79697674 None:intergenic 40.0%
TGTGAAAATGTCTTGAGTGG+AGG + Chr1:79697923-79697942 MsG0180004568.01.T01:five_prime_UTR 40.0%
TTACTTGATTCAGGATTGCC+AGG + Chr1:79698132-79698151 MsG0180004568.01.T01:intron 40.0%
TTCCAGCTTTCACTTGCATA+AGG + Chr1:79698193-79698212 MsG0180004568.01.T01:five_prime_UTR 40.0%
TTGGAATTGAAGGAAGGGAT+TGG + Chr1:79694646-79694665 MsG0180004568.01.T02:CDS 40.0%
TTTAATGGCTAGGATTCCAC+TGG + Chr1:79696490-79696509 MsG0180004568.01.T02:intron 40.0%
TTTATCAGCCTCGTTGAAAC+CGG + Chr1:79700679-79700698 MsG0180004568.01.T01:three_prime_UTR 40.0%
! AAGGTTTGCGACTTTGACTT+GGG - Chr1:79699923-79699942 None:intergenic 40.0%
! ACAAGAAGTGCAAAGATTGG+TGG - Chr1:79701930-79701949 None:intergenic 40.0%
! ACGATTTAGGGTTGAAGAGA+TGG + Chr1:79694595-79694614 MsG0180004568.01.T02:CDS 40.0%
! AGCCTTAAGATTTTGTGGTC+AGG - Chr1:79697445-79697464 None:intergenic 40.0%
! AGTTCTATTTGTGTGGACTG+CGG + Chr1:79700146-79700165 MsG0180004568.01.T01:intron 40.0%
! ATATTCAACGACGGGTTTCT+CGG + Chr1:79701147-79701166 MsG0180004568.01.T01:three_prime_UTR 40.0%
! ATGGTCGCTTTATCAACACT+AGG - Chr1:79697890-79697909 None:intergenic 40.0%
! CAAGAAGTGCAAAGATTGGT+GGG - Chr1:79701929-79701948 None:intergenic 40.0%
! CGATTTAGGGTTGAAGAGAT+GGG + Chr1:79694596-79694615 MsG0180004568.01.T02:CDS 40.0%
! GACATGCTACTTAGGACATA+TGG + Chr1:79700897-79700916 MsG0180004568.01.T01:three_prime_UTR 40.0%
! GCACGGCTAACTAAGATTTT+TGG + Chr1:79696568-79696587 MsG0180004568.01.T02:intron 40.0%
! GCGACCGTGATTTAAAACTT+TGG - Chr1:79699790-79699809 None:intergenic 40.0%
! TTTGACATTCTAAAGGCGCA+AGG + Chr1:79695330-79695349 MsG0180004568.01.T02:intron 40.0%
! TTTGGATCGACATGCTACTT+AGG + Chr1:79700889-79700908 MsG0180004568.01.T01:three_prime_UTR 40.0%
!! AGGGTAAGTTGATATGCCTT+AGG + Chr1:79702118-79702137 MsG0180004568.01.T01:intron 40.0%
!! ATTGATTTTCCAGCTTGCCA+TGG + Chr1:79698685-79698704 MsG0180004568.01.T01:intron 40.0%
!!! AGTCTTTGTTTTTGTGGGAG+TGG - Chr1:79702545-79702564 None:intergenic 40.0%
!!! GAGAAGAGTGGTTTTGATGT+TGG + Chr1:79699450-79699469 MsG0180004568.01.T01:CDS 40.0%
!!! GTCTTTGTTTTTGTGGGAGT+GGG - Chr1:79702544-79702563 None:intergenic 40.0%
AAAGCTCTTCTCCTGTGTTG+AGG + Chr1:79701538-79701557 MsG0180004568.01.T01:three_prime_UTR 45.0%
ACACCGACGAGAATACAACT+TGG + Chr1:79695376-79695395 MsG0180004568.01.T02:intron 45.0%
ACATCATCCCTGCCTTTAAC+AGG - Chr1:79699396-79699415 None:intergenic 45.0%
AGTGTTTGTGGCATGGAAGA+GGG - Chr1:79697700-79697719 None:intergenic 45.0%
ATCAATTTCCCATTGGGCCA+AGG + Chr1:79699018-79699037 MsG0180004568.01.T01:five_prime_UTR 45.0%
ATCATTAGCAGAACTTGCCC+TGG - Chr1:79698153-79698172 None:intergenic 45.0%
ATTGATGAAGGCGATCTGGA+TGG + Chr1:79697530-79697549 MsG0180004568.01.T02:intron 45.0%
CACCTTATGCAAGTGAAAGC+TGG - Chr1:79698198-79698217 None:intergenic 45.0%
CAGCTTTCACTTGCATAAGG+TGG + Chr1:79698196-79698215 MsG0180004568.01.T01:intron 45.0%
CCACCAACAAGCATCAACTT+TGG - Chr1:79699112-79699131 None:intergenic 45.0%
CTTTCATGCCGTGTTTCCTA+AGG - Chr1:79702137-79702156 None:intergenic 45.0%
GATGATGAAGTCGCAACTGT+TGG + Chr1:79700551-79700570 MsG0180004568.01.T01:three_prime_UTR 45.0%
GATGGGCGCAACAGTTATTA+TGG + Chr1:79702594-79702613 MsG0180004568.01.T01:three_prime_UTR 45.0%
GCGCTTCTTGTGACAATCTA+TGG - Chr1:79700334-79700353 None:intergenic 45.0%
GTGATGCCGTAATGCATGAA+GGG + Chr1:79702099-79702118 MsG0180004568.01.T01:intron 45.0%
TAGTGTTTGTGGCATGGAAG+AGG - Chr1:79697701-79697720 None:intergenic 45.0%
TGACACATACGATGTCTTGG+CGG + Chr1:79701565-79701584 MsG0180004568.01.T01:three_prime_UTR 45.0%
TGCTTCACCTGTTAAAGGCA+GGG + Chr1:79699386-79699405 MsG0180004568.01.T01:CDS 45.0%
TGGCCAAGTTGTATTCTCGT+CGG - Chr1:79695382-79695401 None:intergenic 45.0%
TTAGTGTTCACCACCACTCA+TGG + Chr1:79702199-79702218 MsG0180004568.01.T01:intron 45.0%
TTGCTTCACCTGTTAAAGGC+AGG + Chr1:79699385-79699404 MsG0180004568.01.T01:CDS 45.0%
! AGTAGCTTTGCCTCTGCATT+TGG + Chr1:79702802-79702821 MsG0180004568.01.T01:three_prime_UTR 45.0%
! ATTGTTGGAAGGTTGGTCGA+TGG + Chr1:79699607-79699626 MsG0180004568.01.T01:CDS 45.0%
! GATTGGGTTGTGGAGATGTA+GGG + Chr1:79694663-79694682 MsG0180004568.01.T02:intron 45.0%
! TATTCAACGACGGGTTTCTC+GGG + Chr1:79701148-79701167 MsG0180004568.01.T01:three_prime_UTR 45.0%
! TCAAATGTTTTACGGCCACC+TGG - Chr1:79698800-79698819 None:intergenic 45.0%
! TGAACTAACCGGTTTCAACG+AGG - Chr1:79700690-79700709 None:intergenic 45.0%
!! CCAAAGTTGATGCTTGTTGG+TGG + Chr1:79699109-79699128 MsG0180004568.01.T01:five_prime_UTR 45.0%
!! AAAAATATTACTAAAAATAA+TGG - Chr1:79695630-79695649 None:intergenic 5.0%
!! ATAAAAAATATTAAAAATTC+TGG - Chr1:79696053-79696072 None:intergenic 5.0%
!! TAAAAAATATTAAAAAATTC+TGG - Chr1:79696090-79696109 None:intergenic 5.0%
!! TAAAAATAAAAAAAAAATTG+AGG - Chr1:79696793-79696812 None:intergenic 5.0%
!! TAATAAAAAAAAAAAAATTC+TGG + Chr1:79695016-79695035 MsG0180004568.01.T02:intron 5.0%
AAGGGATCAGAAGCTCACAG+TGG + Chr1:79699648-79699667 MsG0180004568.01.T01:CDS 50.0%
AATGTTAAAGGCCGTCTCGG+AGG + Chr1:79702928-79702947 MsG0180004568.01.T01:three_prime_UTR 50.0%
ACCAATCCCAGATCGGTTGA+CGG + Chr1:79702073-79702092 MsG0180004568.01.T01:intron 50.0%
ACGGTCGATAATTACTGGGG+CGG - Chr1:79702039-79702058 None:intergenic 50.0%
ATTGCAACTCCTTGGCCCAA+TGG - Chr1:79699030-79699049 None:intergenic 50.0%
CAAAGATCCACCATGAGTGG+TGG - Chr1:79702212-79702231 None:intergenic 50.0%
CACCTGCAGAACCACCATTT+CGG - Chr1:79701987-79702006 None:intergenic 50.0%
CTCACTCGACAGAACCAAGA+CGG + Chr1:79702739-79702758 MsG0180004568.01.T01:three_prime_UTR 50.0%
GACACATACGATGTCTTGGC+GGG + Chr1:79701566-79701585 MsG0180004568.01.T01:three_prime_UTR 50.0%
GGTGATGCCGTAATGCATGA+AGG + Chr1:79702098-79702117 MsG0180004568.01.T01:intron 50.0%
GTGCAAAGATCCACCATGAG+TGG - Chr1:79702215-79702234 None:intergenic 50.0%
GTGTGTGGTAGAGAGAAGAG+TGG + Chr1:79699438-79699457 MsG0180004568.01.T01:CDS 50.0%
TGACCAAGTCAACGCATACG+TGG + Chr1:79694914-79694933 MsG0180004568.01.T02:intron 50.0%
TGACCAAGTCAACGCATACG+TGG - Chr1:79694933-79694914 None:intergenic 50.0%
TGATCGATGACATCGAGTCG+TGG + Chr1:79701120-79701139 MsG0180004568.01.T01:three_prime_UTR 50.0%
TGTGTCATCTGCCTCAACAC+AGG - Chr1:79701552-79701571 None:intergenic 50.0%
TTCTTGAGACCATGGCAAGC+TGG - Chr1:79698697-79698716 None:intergenic 50.0%
TTGCAACTCCTTGGCCCAAT+GGG - Chr1:79699029-79699048 None:intergenic 50.0%
! GGATTGGGTTGTGGAGATGT+AGG + Chr1:79694662-79694681 MsG0180004568.01.T02:intron 50.0%
! GGGAGTGTGTGTGTTGACAA+AGG - Chr1:79701909-79701928 None:intergenic 50.0%
! TGAAGGAAGGGATTGGGTTG+TGG + Chr1:79694653-79694672 MsG0180004568.01.T02:CDS 50.0%
!! ATGCCACGTATGCGTTGACT+TGG + Chr1:79696188-79696207 MsG0180004568.01.T02:intron 50.0%
!! ATGCCACGTATGCGTTGACT+TGG - Chr1:79696207-79696188 None:intergenic 50.0%
ACTCGACAGAACCAAGACGG+AGG + Chr1:79702742-79702761 MsG0180004568.01.T01:three_prime_UTR 55.0%
ACTGGATCCTCTCCTGTGAC+TGG - Chr1:79696521-79696540 None:intergenic 55.0%
ATCACGTTCGTGCAGCAGTG+TGG + Chr1:79699871-79699890 MsG0180004568.01.T01:intron 55.0%
ATCCCAGATCGGTTGACGGT+TGG + Chr1:79702077-79702096 MsG0180004568.01.T01:intron 55.0%
CACCAACCGTCAACCGATCT+GGG - Chr1:79702082-79702101 None:intergenic 55.0%
CAGAACCACCATTTCGGTCG+CGG - Chr1:79701981-79702000 None:intergenic 55.0%
CATACGATGTCTTGGCGGGA+TGG + Chr1:79701570-79701589 MsG0180004568.01.T01:three_prime_UTR 55.0%
CTCGACAGAACCAAGACGGA+GGG + Chr1:79702743-79702762 MsG0180004568.01.T01:three_prime_UTR 55.0%
CTGCTGCACGAACGTGATTG+AGG - Chr1:79699869-79699888 None:intergenic 55.0%
GACAATAGCACCCTCCGTCT+TGG - Chr1:79702756-79702775 None:intergenic 55.0%
GATAATTACTGGGGCGGAGG+TGG - Chr1:79702033-79702052 None:intergenic 55.0%
GTCGATAATTACTGGGGCGG+AGG - Chr1:79702036-79702055 None:intergenic 55.0%
GTGTTCACCACCACTCATGG+TGG + Chr1:79702202-79702221 MsG0180004568.01.T01:intron 55.0%
TCACCAACCGTCAACCGATC+TGG - Chr1:79702083-79702102 None:intergenic 55.0%
! AACCGATCTGGGATTGGTGC+CGG - Chr1:79702071-79702090 None:intergenic 55.0%
! ACCGTCAACCGATCTGGGAT+TGG - Chr1:79702077-79702096 None:intergenic 55.0%
! CGAAATGGTGGTTCTGCAGG+TGG + Chr1:79701985-79702004 MsG0180004568.01.T01:intron 55.0%
! GACCGAAATGGTGGTTCTGC+AGG + Chr1:79701982-79702001 MsG0180004568.01.T01:intron 55.0%
!! TATCGACCGTTCTAGGGCTC+CGG + Chr1:79702049-79702068 MsG0180004568.01.T01:intron 55.0%
AACCACCATTTCGGTCGCGG+CGG - Chr1:79701978-79701997 None:intergenic 60.0%
ACCATGTGCCTCCTCCGAGA+CGG - Chr1:79702942-79702961 None:intergenic 60.0%
ATTACTGGGGCGGAGGTGGA+TGG - Chr1:79702029-79702048 None:intergenic 60.0%
CCACTGGACTCTCCAGTCAC+AGG + Chr1:79696506-79696525 MsG0180004568.01.T02:intron 60.0%
CCTGTGACTGGAGAGTCCAG+TGG - Chr1:79696509-79696528 None:intergenic 60.0%
CTCCGGCACCAATCCCAGAT+CGG + Chr1:79702066-79702085 MsG0180004568.01.T01:intron 60.0%
GAGGTGGATGGTGAGAACCG+AGG - Chr1:79702017-79702036 None:intergenic 60.0%
GGACTCTCCAGTCACAGGAG+AGG + Chr1:79696511-79696530 MsG0180004568.01.T02:intron 60.0%
GTGGATGGTGAGAACCGAGG+CGG - Chr1:79702014-79702033 None:intergenic 60.0%
GTTAAAGGCCGTCTCGGAGG+AGG + Chr1:79702931-79702950 MsG0180004568.01.T01:three_prime_UTR 60.0%
!! TTGGTGCCGGAGCCCTAGAA+CGG - Chr1:79702058-79702077 None:intergenic 60.0%
AGAAGCCGCCGCGACCGAAA+TGG + Chr1:79701970-79701989 MsG0180004568.01.T01:intron 65.0%
TCTGCAGGTGGAAGCCGCCT+CGG + Chr1:79701997-79702016 MsG0180004568.01.T01:intron 65.0%
AGCCGCCGCGACCGAAATGG+TGG + Chr1:79701973-79701992 MsG0180004568.01.T01:intron 70.0%
! GCCGTCTCGGAGGAGGCACA+TGG + Chr1:79702938-79702957 MsG0180004568.01.T01:three_prime_UTR 70.0%
Chromosome Type Strat End Strand Name
Chr1 gene 79694588 79703017 79694588 ID=MsG0180004568.01;Name=MsG0180004568.01
Chr1 mRNA 79697828 79703017 79697828 ID=MsG0180004568.01.T01;Parent=MsG0180004568.01;Name=MsG0180004568.01.T01;_AED=0.12;_eAED=0.12;_QI=913|1|1|1|0.5|0.2|5|1665|229
Chr1 exon 79697828 79698022 79697828 ID=MsG0180004568.01.T01:exon:15405;Parent=MsG0180004568.01.T01
Chr1 five_prime_UTR 79697828 79698022 79697828 ID=MsG0180004568.01.T01:five_prime_utr;Parent=MsG0180004568.01.T01
Chr1 five_prime_UTR 79698145 79698214 79698145 ID=MsG0180004568.01.T01:five_prime_utr;Parent=MsG0180004568.01.T01
Chr1 five_prime_UTR 79698698 79699345 79698698 ID=MsG0180004568.01.T01:five_prime_utr;Parent=MsG0180004568.01.T01
Chr1 CDS 79699346 79699759 79699346 ID=MsG0180004568.01.T01:cds;Parent=MsG0180004568.01.T01
Chr1 CDS 79700275 79700550 79700275 ID=MsG0180004568.01.T01:cds;Parent=MsG0180004568.01.T01
Chr1 three_prime_UTR 79700551 79701722 79700551 ID=MsG0180004568.01.T01:three_prime_utr;Parent=MsG0180004568.01.T01
Chr1 three_prime_UTR 79702525 79703017 79702525 ID=MsG0180004568.01.T01:three_prime_utr;Parent=MsG0180004568.01.T01
Chr1 mRNA 79694588 79703017 79694588 ID=MsG0180004568.01.T02;Parent=MsG0180004568.01;Name=MsG0180004568.01.T02;_AED=0.15;_eAED=0.15;_QI=0|0.75|0.8|0.8|0.75|0.4|5|2619|181
Chr1 CDS 79694588 79694679 79694588 ID=MsG0180004568.01.T02:cds;Parent=MsG0180004568.01.T02
Chr1 CDS 79698145 79698214 79698145 ID=MsG0180004568.01.T02:cds;Parent=MsG0180004568.01.T02
Chr1 CDS 79698698 79699081 79698698 ID=MsG0180004568.01.T02:cds;Parent=MsG0180004568.01.T02
Chr1 three_prime_UTR 79699082 79699759 79699082 ID=MsG0180004568.01.T02:three_prime_utr;Parent=MsG0180004568.01.T02
Chr1 three_prime_UTR 79700275 79701722 79700275 ID=MsG0180004568.01.T02:three_prime_utr;Parent=MsG0180004568.01.T02
Chr1 three_prime_UTR 79702525 79703017 79702525 ID=MsG0180004568.01.T02:three_prime_utr;Parent=MsG0180004568.01.T02
Chr1 mRNA 79694588 79699794 79694588 ID=MsG0180004568.01.T03;Parent=MsG0180004568.01;Name=MsG0180004568.01.T03;_AED=0.40;_eAED=0.40;_QI=0|0.5|0.66|0.66|1|1|3|713|181
Chr1 exon 79698698 79699794 79698698 ID=MsG0180004568.01.T03:exon:15411;Parent=MsG0180004568.01.T03
Chr1 CDS 79694588 79694679 79694588 ID=MsG0180004568.01.T03:cds;Parent=MsG0180004568.01.T03
Chr1 CDS 79698145 79698214 79698145 ID=MsG0180004568.01.T03:cds;Parent=MsG0180004568.01.T03
Chr1 CDS 79698698 79699081 79698698 ID=MsG0180004568.01.T03:cds;Parent=MsG0180004568.01.T03
Chr1 three_prime_UTR 79699082 79699794 79699082 ID=MsG0180004568.01.T03:three_prime_utr;Parent=MsG0180004568.01.T03
Gene Sequence

>MsG0180004568.01.T02

ATGGGGAACGATTTAGGGTTGAAGAGATGGGAATTGAAGTTGAATTTGGAGATTGGAATTGGAATTGAAGGAAGGGATTGGGTTGTGGAGATGATTGCCAGGGCAAGTTCTGCTAATGATTTAATCATACAAGTTGGTGATTCCAGCTTTCACTTGCATAAGCTTGCCATGGTCTCAAGAAGTGAATATTTGAATAGGCTTGTCTTCAAAAGGGGAAGTAACATAGAAGACAATAATCATACTATCCAAATAGACAATCTTCCAGGTGGCCGTAAAACATTTGAGTTAGTTGTCAAATTCTGTTACGGTTGGAAATTCGACATGACATCATCCAACATAGCTTCATTATATTGTGCTGCAAGTTTCTTAGAAATGAGTGAAGATATTGAACAAGGAAATCTAATTTCAAAAACAGAATCATTTCTCACTTTTCTAATGTTATCTTCATGGAAAGACACATTTCGTATACTCAAAAGTTGTGAATCAATTTCCCATTGGGCCAAGGAGTTGCAATTAGTGAAACGTTGCTCAGAAGCAATAGCTTGA

>MsG0180004568.01.T01

ATGCTTCCAACTGAAGAAAATTCTGTCTCTTGCAATTTTTTGCTTCACCTGTTAAAGGCAGGGATGATGTTGAAAATCAATCAAGAGTTGTTGTGTGTGGTAGAGAGAAGAGTGGTTTTGATGTTGGAGCAGTGTTGTGTTCAAGATCTTTTGGTTAAGAATCAAGGAGATGAAGATTCTTTGTATGATGTTGATGTTGTTGTTAAAGTGTTACAATCTTATGTTTTTGGCATTTCAAGTAATTCTGGTGCAAAAGTTCACATTGTTGGAAGGTTGGTCGATGGTTATCTATCACAAGTTGCAAGGGATCAGAAGCTCACAGTGGAAAGCTTCAAATTGCTTGTTGAAGTATTGCCACAGAATGCTAGAGATTGTGATGACAATCTCTACAGAGCTATTGACATGTACCTTAAGGCACATCCATATTTGACAGAAGAAGATAGAGAAAGTGTGTGTAATGTATTGGCATACCATAGATTGTCACAAGAAGCGCGTCAGCATGTGATGAAAAATGATAGGTTGCCCATGAAATTATCAACAGGATTTGTCCTTCTAGAACAAGTGAACATGTCATGGACAATGGCAAGTAAAGGATCAAATTACCAAAGGAGTAAGACAAGCATCAAGGTTAGCAAAGATTTTGAAAACAGACAGGAATCAGGAGATAAAAGTAATGAGAAAAGATGTTGA

>MsG0180004568.01.T03

ATGGGGAACGATTTAGGGTTGAAGAGATGGGAATTGAAGTTGAATTTGGAGATTGGAATTGGAATTGAAGGAAGGGATTGGGTTGTGGAGATGATTGCCAGGGCAAGTTCTGCTAATGATTTAATCATACAAGTTGGTGATTCCAGCTTTCACTTGCATAAGCTTGCCATGGTCTCAAGAAGTGAATATTTGAATAGGCTTGTCTTCAAAAGGGGAAGTAACATAGAAGACAATAATCATACTATCCAAATAGACAATCTTCCAGGTGGCCGTAAAACATTTGAGTTAGTTGTCAAATTCTGTTACGGTTGGAAATTCGACATGACATCATCCAACATAGCTTCATTATATTGTGCTGCAAGTTTCTTAGAAATGAGTGAAGATATTGAACAAGGAAATCTAATTTCAAAAACAGAATCATTTCTCACTTTTCTAATGTTATCTTCATGGAAAGACACATTTCGTATACTCAAAAGTTGTGAATCAATTTCCCATTGGGCCAAGGAGTTGCAATTAGTGAAACGTTGCTCAGAAGCAATAGCTTGA
Protein sequence

>MsG0180004568.01.T02

MGNDLGLKRWELKLNLEIGIGIEGRDWVVEMIARASSANDLIIQVGDSSFHLHKLAMVSRSEYLNRLVFKRGSNIEDNNHTIQIDNLPGGRKTFELVVKFCYGWKFDMTSSNIASLYCAASFLEMSEDIEQGNLISKTESFLTFLMLSSWKDTFRILKSCESISHWAKELQLVKRCSEAIA*

>MsG0180004568.01.T01

MLPTEENSVSCNFLLHLLKAGMMLKINQELLCVVERRVVLMLEQCCVQDLLVKNQGDEDSLYDVDVVVKVLQSYVFGISSNSGAKVHIVGRLVDGYLSQVARDQKLTVESFKLLVEVLPQNARDCDDNLYRAIDMYLKAHPYLTEEDRESVCNVLAYHRLSQEARQHVMKNDRLPMKLSTGFVLLEQVNMSWTMASKGSNYQRSKTSIKVSKDFENRQESGDKSNEKRC*

>MsG0180004568.01.T03

MGNDLGLKRWELKLNLEIGIGIEGRDWVVEMIARASSANDLIIQVGDSSFHLHKLAMVSRSEYLNRLVFKRGSNIEDNNHTIQIDNLPGGRKTFELVVKFCYGWKFDMTSSNIASLYCAASFLEMSEDIEQGNLISKTESFLTFLMLSSWKDTFRILKSCESISHWAKELQLVKRCSEAIA*