AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180004798.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180004798.01.T01 MTR_1g087140 91.478 1103 45 6 7 1061 1 1102 0.0 2048
MsG0180004798.01.T01 MTR_1g090850 58.348 1102 341 21 10 1052 3 1045 0.0 1123
MsG0180004798.01.T01 MTR_8g075340 35.083 362 211 9 273 630 394 735 2.26e-41 166
MsG0180004798.01.T01 MTR_8g075340 33.766 154 77 4 914 1043 1001 1153 2.96e-16 84.7
MsG0180004798.01.T01 MTR_5g022470 34.444 360 216 9 273 630 432 773 8.31e-41 164
MsG0180004798.01.T01 MTR_5g022470 34.483 145 71 4 922 1043 1040 1183 3.93e-16 84.3
MsG0180004798.01.T01 MTR_5g022470 34.444 360 216 9 273 630 432 773 8.70e-41 164
MsG0180004798.01.T01 MTR_8g019680 64.948 97 29 2 958 1052 53 146 9.17e-36 133
MsG0180004798.01.T01 MTR_8g080770 29.064 406 219 13 339 726 272 626 1.80e-31 133
MsG0180004798.01.T01 MTR_8g080770 32.609 138 69 6 929 1053 729 855 1.40e-13 75.9
MsG0180004798.01.T01 MTR_8g080770 28.818 406 220 13 339 726 381 735 4.11e-31 132
MsG0180004798.01.T01 MTR_8g080770 32.609 138 69 6 929 1053 838 964 1.35e-13 75.9
MsG0180004798.01.T01 MTR_3g085130 30.351 313 177 11 342 634 229 520 1.38e-29 127
MsG0180004798.01.T01 MTR_3g085130 33.577 137 68 6 929 1053 693 818 3.70e-14 77.8
MsG0180004798.01.T01 MTR_3g085130 30.032 313 178 11 342 634 439 730 6.49e-29 125
MsG0180004798.01.T01 MTR_3g085130 32.716 162 83 8 904 1053 881 1028 3.69e-14 77.8
MsG0180004798.01.T01 MTR_5g097410 26.431 367 214 12 298 641 575 908 1.28e-23 108
MsG0180004798.01.T01 MTR_5g097410 33.333 150 62 7 932 1055 1074 1211 2.07e-12 72.4
MsG0180004798.01.T01 MTR_8g106150 26.667 375 215 10 307 640 340 695 5.15e-22 103
MsG0180004798.01.T01 MTR_8g106150 33.775 151 75 5 920 1053 849 991 7.09e-15 80.1
MsG0180004798.01.T01 MTR_8g106150 26.344 372 220 9 307 640 97 452 8.29e-22 102
MsG0180004798.01.T01 MTR_8g106150 33.775 151 75 5 920 1053 606 748 6.01e-15 80.1
MsG0180004798.01.T01 MTR_3g105590 29.464 336 180 14 323 625 335 646 6.94e-20 96.3
MsG0180004798.01.T01 MTR_4g031150 27.049 366 203 12 320 664 359 681 1.85e-18 91.7
MsG0180004798.01.T01 MTR_1g013360 26.027 365 203 12 355 669 381 728 1.30e-17 89.0
MsG0180004798.01.T01 MTR_7g109150 28.099 242 138 7 410 646 393 603 6.09e-16 83.2
MsG0180004798.01.T01 MTR_8g063580 36.496 137 61 6 935 1058 15 138 6.52e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180004798.01.T01 AT2G47430 37.313 1139 591 25 11 1057 12 1119 0.0 652
MsG0180004798.01.T01 AT2G17820 34.530 362 213 10 273 630 421 762 1.82e-42 169
MsG0180004798.01.T01 AT2G17820 31.875 160 79 4 922 1052 1034 1192 6.10e-16 84.0
MsG0180004798.01.T01 AT1G27320 27.475 404 225 12 336 725 436 785 1.69e-30 130
MsG0180004798.01.T01 AT1G27320 29.221 154 75 5 929 1058 887 1030 9.22e-12 70.1
MsG0180004798.01.T01 AT2G01830 28.338 367 217 12 294 633 415 762 4.19e-28 123
MsG0180004798.01.T01 AT2G01830 35.333 150 75 5 918 1053 927 1068 6.59e-16 83.6
MsG0180004798.01.T01 AT2G01830 27.596 366 221 11 294 633 404 751 4.93e-28 122
MsG0180004798.01.T01 AT2G01830 35.762 151 73 6 918 1053 916 1057 6.96e-16 83.6
MsG0180004798.01.T01 AT2G01830 27.596 366 221 11 294 633 392 739 5.73e-28 122
MsG0180004798.01.T01 AT2G01830 37.037 135 67 4 929 1053 919 1045 7.60e-16 83.6
MsG0180004798.01.T01 AT2G01830 27.596 366 221 11 294 633 392 739 5.73e-28 122
MsG0180004798.01.T01 AT2G01830 37.037 135 67 4 929 1053 919 1045 7.60e-16 83.6
MsG0180004798.01.T01 AT2G01830 27.596 366 221 11 294 633 392 739 5.73e-28 122
MsG0180004798.01.T01 AT2G01830 37.037 135 67 4 929 1053 919 1045 7.60e-16 83.6
MsG0180004798.01.T01 AT2G01830 27.596 366 221 11 294 633 392 739 5.73e-28 122
MsG0180004798.01.T01 AT2G01830 37.037 135 67 4 929 1053 919 1045 7.60e-16 83.6
MsG0180004798.01.T01 AT5G35750 29.607 331 172 12 336 636 573 872 2.64e-25 114
MsG0180004798.01.T01 AT5G35750 31.544 149 68 5 929 1053 1032 1170 9.64e-12 70.1
MsG0180004798.01.T01 AT1G66340 28.481 316 175 10 334 642 323 594 7.25e-19 92.8
MsG0180004798.01.T01 AT5G10720 30.403 273 153 11 355 625 371 608 7.97e-19 92.8
MsG0180004798.01.T01 AT2G40940 25.231 325 186 9 320 632 309 588 4.18e-15 80.5

Find 191 sgRNAs with CRISPR-Local

Find 361 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCTTATGATTATATCTTAA+TGG 0.123404 1:-82898146 MsG0180004798.01.T01:CDS
GCTTATCTTGCAGGCCTTAT+TGG 0.151594 1:-82901405 MsG0180004798.01.T01:CDS
GATAGTGTTGTTAGATATTA+TGG 0.179176 1:+82902811 None:intergenic
AGGTGACATTAGTAGAATTA+AGG 0.196080 1:+82903338 None:intergenic
TGTGATCTAGGTTCATTTCT+TGG 0.224149 1:+82898478 None:intergenic
ATTGATGCAAGTTGGATAAA+TGG 0.240438 1:-82902785 MsG0180004798.01.T01:CDS
AGTTGTTACTAATTCAAAAT+TGG 0.240702 1:-82901358 MsG0180004798.01.T01:CDS
GTTTCAATTCAAGCTGTTAA+TGG 0.241296 1:-82902510 MsG0180004798.01.T01:intron
GATGGAAAAGTTATTGTAAA+AGG 0.243895 1:-82902569 MsG0180004798.01.T01:CDS
TCAAGGGACAAAATCATATT+TGG 0.248361 1:-82902600 MsG0180004798.01.T01:CDS
TTCTGAACTTGGTTTCAAAT+TGG 0.254047 1:+82901332 None:intergenic
ACTGACTTGTGATTCTCTTT+AGG 0.274643 1:+82900618 None:intergenic
TTCACATGAATTTGCATCAT+TGG 0.275818 1:-82902750 MsG0180004798.01.T01:CDS
AGCAAAAGCAAGACTCTTAT+TGG 0.282452 1:+82901449 None:intergenic
GATCTTCGTGCTTATCTTGC+AGG 0.288028 1:-82901414 MsG0180004798.01.T01:CDS
ATTAGTAACAACTAATTTAG+AGG 0.290279 1:+82901368 None:intergenic
ACAAAAGTCCTATGTTAATC+TGG 0.291733 1:-82898398 MsG0180004798.01.T01:CDS
TTCTTTCCACTTAATGGTTT+AGG 0.294905 1:+82898319 None:intergenic
AGTAAATGCTCTTTCTTGAT+AGG 0.295947 1:+82897857 None:intergenic
TTCCTGAGTTCGGTGGTAAT+TGG 0.302430 1:-82898519 MsG0180004798.01.T01:CDS
TTTGAAACCAAGTTCAGAAT+TGG 0.304813 1:-82901328 MsG0180004798.01.T01:CDS
GTGTTAGCTGTCCCACAAAA+TGG 0.319563 1:-82901660 MsG0180004798.01.T01:CDS
TTCATCTTTCATGATCTTGC+TGG 0.339861 1:-82903730 MsG0180004798.01.T01:intron
ATGATTTACCTAGCAAATCT+TGG 0.341823 1:+82901274 None:intergenic
TTGGCAGGTACTTGTGATCT+AGG 0.352757 1:+82898466 None:intergenic
GCTGTTAAATTTACTGATGA+AGG 0.355175 1:-82900843 MsG0180004798.01.T01:CDS
GGTGACATTAGTAGAATTAA+GGG 0.356467 1:+82903339 None:intergenic
GTAGATTGTTCCAAGTCATT+AGG 0.359195 1:-82898546 MsG0180004798.01.T01:CDS
TCCAACCAAACAACTTTACT+AGG 0.359940 1:+82898646 None:intergenic
GTGATATCAAAACCATTTCA+TGG 0.361788 1:-82898571 MsG0180004798.01.T01:CDS
CCAACAAGATCCATGTCTTA+TGG 0.374116 1:-82900679 MsG0180004798.01.T01:CDS
ACAATTCGTACTGCTAGTTC+TGG 0.375945 1:-82899126 MsG0180004798.01.T01:CDS
ATGCTCTTTCTTGATAGGTT+TGG 0.386579 1:+82897862 None:intergenic
ACACCTTTCTTCATTGCCAT+TGG 0.389100 1:+82900969 None:intergenic
GAGACAGTGAATTATGAGTA+TGG 0.390792 1:-82899192 MsG0180004798.01.T01:CDS
TCACATGAATTTGCATCATT+GGG 0.392411 1:-82902749 MsG0180004798.01.T01:CDS
GTATTTGAAGTGGATGATAC+AGG 0.399459 1:-82900651 MsG0180004798.01.T01:CDS
TCAATCCTAGTAAAGTTGTT+TGG 0.399703 1:-82898651 MsG0180004798.01.T01:CDS
GTAGGAACTGGCTTGGGACT+TGG 0.405420 1:-82900552 MsG0180004798.01.T01:CDS
GAGGGGCTAACATGGAGTTT+TGG 0.406382 1:+82899081 None:intergenic
AGTCTTCGGAGATGAGTTCT+AGG 0.419954 1:-82898870 MsG0180004798.01.T01:CDS
ATCTTACAAAGCTTAGAAAA+TGG 0.421080 1:+82898700 None:intergenic
AACAATCTACTACCATGAAA+TGG 0.422179 1:+82898559 None:intergenic
AACACTCTTGTGGTTAGTCT+TGG 0.422431 1:+82900773 None:intergenic
ATTAGGCTTCTTCCTGAGTT+CGG 0.422475 1:-82898529 MsG0180004798.01.T01:CDS
ACATTTCAATCAAACCAATA+AGG 0.422617 1:+82901391 None:intergenic
CAGTTGTTCATAGAGAGCTT+AGG 0.425096 1:-82898994 MsG0180004798.01.T01:CDS
TTTGTTGATGATGATTTCAT+TGG 0.427329 1:+82903385 None:intergenic
TAGACACACACTTTCATCAT+TGG 0.428324 1:+82898447 None:intergenic
TCATATTTGGCTACCAAAGA+TGG 0.429385 1:-82902587 MsG0180004798.01.T01:CDS
ATGGCTACTTTGAGATCTCT+TGG 0.429609 1:-82898253 MsG0180004798.01.T01:CDS
TTATATCTTAATGGATTGTC+AGG 0.430305 1:-82898137 MsG0180004798.01.T01:intron
CCATAAGACATGGATCTTGT+TGG 0.432881 1:+82900679 None:intergenic
AGTTGTTCATAGAGAGCTTA+GGG 0.434205 1:-82898993 MsG0180004798.01.T01:CDS
CCACCATACTCAATGAATAC+TGG 0.434464 1:-82903777 None:intergenic
TCCTAGTAAAGTTGTTTGGT+TGG 0.434623 1:-82898647 MsG0180004798.01.T01:CDS
TTGGTCTCCAATTCTGAACT+TGG 0.436377 1:+82901321 None:intergenic
GAAAGGTGTAGAAGTTGTAT+TGG 0.437547 1:-82900955 MsG0180004798.01.T01:CDS
CATAAGACATGGATCTTGTT+GGG 0.439105 1:+82900680 None:intergenic
GACAAGCTGACCACTGAGAC+TGG 0.440049 1:-82897902 MsG0180004798.01.T01:CDS
AAGAGTTCCTTTCAAAGCTA+TGG 0.440702 1:-82898818 MsG0180004798.01.T01:CDS
CCTTTCAAAGCTATGGATCA+TGG 0.441919 1:-82898811 MsG0180004798.01.T01:CDS
TCAAAGTTCACCGGAGTCTT+CGG 0.442260 1:-82898884 MsG0180004798.01.T01:CDS
AATCCAAGTCATAAAGAAAA+GGG 0.444621 1:-82901624 MsG0180004798.01.T01:CDS
CACTGTCTCATTCTCACATA+AGG 0.445103 1:+82899206 None:intergenic
TCTGTTGGCCAAGTAGGAAC+TGG 0.448175 1:-82900564 MsG0180004798.01.T01:CDS
TATCATCTTGATCAATTGCT+TGG 0.448900 1:+82898596 None:intergenic
GGAGACCAACTTAAAACAAA+TGG 0.449087 1:-82901307 MsG0180004798.01.T01:CDS
TAATCCAAGTCATAAAGAAA+AGG 0.450153 1:-82901625 MsG0180004798.01.T01:CDS
ATTATCATTGATGCAAATGC+AGG 0.450739 1:-82898724 MsG0180004798.01.T01:CDS
TATGTTAATCTGGGAAGAAA+AGG 0.456024 1:-82898388 MsG0180004798.01.T01:CDS
GTTGTGTTATTGTAGGCATA+TGG 0.458179 1:-82903547 MsG0180004798.01.T01:intron
GCCTCAAACCCATCCTTCAC+TGG 0.462390 1:+82897998 None:intergenic
GTCCCAAGCCAGTTCCTACT+TGG 0.464624 1:+82900556 None:intergenic
TAGGAACTGGCTTGGGACTT+GGG 0.466445 1:-82900551 MsG0180004798.01.T01:CDS
GGCCAAGTAGGAACTGGCTT+GGG 0.467713 1:-82900558 MsG0180004798.01.T01:CDS
GAGAATTCTGTTGGCCAAGT+AGG 0.471261 1:-82900570 MsG0180004798.01.T01:CDS
AGAATAGGAGGGGTCTCTCT+TGG 0.472858 1:-82902671 MsG0180004798.01.T01:CDS
GAAAATAGTGACATAATGTA+AGG 0.473865 1:-82897815 None:intergenic
GTTGTATTGGACTCTTGTAA+TGG 0.481853 1:-82900942 MsG0180004798.01.T01:CDS
GCCTCTGAGAGGGGCTAACA+TGG 0.484367 1:+82899073 None:intergenic
ACTTGGGATTGTGCAGTCAT+TGG 0.486079 1:-82900535 MsG0180004798.01.T01:intron
TCCATTAAGATATAATCATA+AGG 0.487002 1:+82898145 None:intergenic
TCAGCTAGAATCAACAGAAT+AGG 0.488864 1:-82902686 MsG0180004798.01.T01:CDS
AGCAATCCTAAACCATTAAG+TGG 0.490150 1:-82898325 MsG0180004798.01.T01:CDS
GCCAGTGAAGGATGGGTTTG+AGG 0.491157 1:-82897999 MsG0180004798.01.T01:CDS
TCTTGATAGGTTTGGTAATG+TGG 0.491525 1:+82897870 None:intergenic
TAATCAACACTACTCTCAAA+AGG 0.491934 1:+82898619 None:intergenic
TGATTTACCTAGCAAATCTT+GGG 0.494105 1:+82901275 None:intergenic
ATTCACGTGTGAAAGGTGAT+AGG 0.495625 1:-82900905 MsG0180004798.01.T01:CDS
TTCAATGCTTGAAATAATAA+CGG 0.495873 1:+82903016 None:intergenic
GGTATTGTGGACAAGGAAGT+TGG 0.498320 1:-82899267 MsG0180004798.01.T01:CDS
TTGACACAAATCTCATACAT+AGG 0.498626 1:-82902980 MsG0180004798.01.T01:CDS
CAAGTTAAAGAGAATTCTGT+TGG 0.500351 1:-82900579 MsG0180004798.01.T01:CDS
CAAGATAAGCACGAAGATCA+TGG 0.500470 1:+82901418 None:intergenic
CAGGAAGAAGCCTAATGACT+TGG 0.500658 1:+82898536 None:intergenic
AGGAGGATTAGTAAAATCCT+TGG 0.504201 1:+82898165 None:intergenic
TTCTAGGTACGTTTGATGCA+TGG 0.504400 1:-82899297 MsG0180004798.01.T01:intron
TATGCTGAGAAAGATTTGTA+TGG 0.505750 1:-82898272 MsG0180004798.01.T01:CDS
ATTCCAGTGTCATGGTTCAC+AGG 0.507966 1:+82902848 None:intergenic
CAGTGTCATGGTTCACAGGT+TGG 0.508152 1:+82902852 None:intergenic
GACAGATGCCAGTGAAGGAT+GGG 0.510140 1:-82898006 MsG0180004798.01.T01:intron
CCATGATCCATAGCTTTGAA+AGG 0.512640 1:+82898811 None:intergenic
AATGAATACTGGTTTATCAA+TGG 0.512649 1:-82903766 MsG0180004798.01.T01:CDS
CACACACTTTCATCATTGGC+AGG 0.512870 1:+82898451 None:intergenic
CAAAAGTCCTATGTTAATCT+GGG 0.514695 1:-82898397 MsG0180004798.01.T01:CDS
CTTTCTTCATTGCCATTGGA+TGG 0.517203 1:+82900973 None:intergenic
GACAAGGAAGTTGGCAAAAG+AGG 0.518131 1:-82899258 MsG0180004798.01.T01:CDS
ATGATAATCAAAACAAAACT+TGG 0.518308 1:+82898739 None:intergenic
CATCCAATGGCAATGAAGAA+AGG 0.522261 1:-82900972 MsG0180004798.01.T01:CDS
CTATCAATATTGATGCAAGT+TGG 0.529019 1:-82902793 MsG0180004798.01.T01:CDS
CGTTTGATGCATGGAGACAT+TGG 0.531016 1:-82899288 MsG0180004798.01.T01:CDS
GGACAGATGCCAGTGAAGGA+TGG 0.536750 1:-82898007 MsG0180004798.01.T01:intron
GAGCTTAGGGATTAAAGTCA+AGG 0.538142 1:-82898980 MsG0180004798.01.T01:CDS
GAAGGCTCAGGCCTCTGAGA+GGG 0.538284 1:+82899063 None:intergenic
AATTGTGCCCAAGATTTGCT+AGG 0.541010 1:-82901282 MsG0180004798.01.T01:intron
GACAATGCGAGTGATATAAT+CGG 0.541959 1:+82902628 None:intergenic
CTTTCTCTCAGCTTGTTCTG+TGG 0.542457 1:+82901476 None:intergenic
ATCTCATACATAGGAATGGA+AGG 0.542582 1:-82902971 MsG0180004798.01.T01:CDS
TATGAGTATGGATCAACCTC+AGG 0.543399 1:-82899180 MsG0180004798.01.T01:CDS
CATTCTTTACATTACTGATG+AGG 0.545789 1:-82899034 MsG0180004798.01.T01:CDS
CTCGCATTGTCGATCGTCAA+GGG 0.547004 1:-82902616 MsG0180004798.01.T01:CDS
TATTTGAAGTGGATGATACA+GGG 0.550570 1:-82900650 MsG0180004798.01.T01:CDS
CTATCATTAAAATCATCAAA+CGG 0.551645 1:+82902534 None:intergenic
CAAGGTGAAATAGAAGAAAG+TGG 0.553365 1:-82898355 MsG0180004798.01.T01:CDS
GCTAGAATCAACAGAATAGG+AGG 0.555811 1:-82902683 MsG0180004798.01.T01:CDS
GACACAAGCAAGATTGAGGC+AGG 0.556358 1:-82901062 MsG0180004798.01.T01:CDS
TGTACTCTAACTCATCTAGT+GGG 0.561197 1:-82902904 MsG0180004798.01.T01:CDS
ACTATTGACCAATGTGAGAA+TGG 0.561890 1:-82898223 MsG0180004798.01.T01:CDS
AGAGAGATGGAGAAACACTA+TGG 0.561980 1:-82897962 MsG0180004798.01.T01:CDS
ATCAAACATTCACGTGTGAA+AGG 0.562833 1:-82900912 MsG0180004798.01.T01:CDS
ACAAATCTCATACATAGGAA+TGG 0.563392 1:-82902975 MsG0180004798.01.T01:CDS
AGCAAGATCATGAAAGATGA+AGG 0.564158 1:+82903732 None:intergenic
CTGTTAAATTTACTGATGAA+GGG 0.567152 1:-82900842 MsG0180004798.01.T01:CDS
GACACCATGTTGGTATCTCA+TGG 0.568120 1:-82903500 MsG0180004798.01.T01:CDS
TGGCCAAGTAGGAACTGGCT+TGG 0.570068 1:-82900559 MsG0180004798.01.T01:CDS
AGGATGGGTTTGAGGCAACA+AGG 0.571342 1:-82897991 MsG0180004798.01.T01:CDS
ACTCGCATTGTCGATCGTCA+AGG 0.572216 1:-82902617 MsG0180004798.01.T01:CDS
ATGTAAAGAATGACATGTGA+AGG 0.573120 1:+82899045 None:intergenic
GTGTTGTGAAATCTTTGTCT+TGG 0.576550 1:-82900755 MsG0180004798.01.T01:CDS
GGCTGTGAGAACTGTTCAAG+AGG 0.577188 1:-82898194 MsG0180004798.01.T01:CDS
AAGATTTCACAACACTCTTG+TGG 0.579252 1:+82900763 None:intergenic
ATCCAATTACCACCGAACTC+AGG 0.583478 1:+82898517 None:intergenic
GCTGACCACTGAGACTGGAA+TGG 0.584171 1:-82897897 MsG0180004798.01.T01:CDS
AGTTGATTTGTACCATCCAA+TGG 0.585418 1:-82900985 MsG0180004798.01.T01:CDS
ACTTGACACAAGCAAGATTG+AGG 0.587753 1:-82901066 MsG0180004798.01.T01:CDS
TATCAGTGATCAAAGTTCAC+CGG 0.592353 1:-82898893 MsG0180004798.01.T01:CDS
TTGCCTCATTGACACCATGT+TGG 0.593071 1:-82903510 MsG0180004798.01.T01:CDS
AAGTGTGGAACAATGTTGGA+AGG 0.593740 1:-82898425 MsG0180004798.01.T01:CDS
GCATGGAGACATTGGTATTG+TGG 0.595262 1:-82899280 MsG0180004798.01.T01:CDS
AGAAAAGGTTCTGTTCATCA+AGG 0.596627 1:-82898373 MsG0180004798.01.T01:CDS
CCTCTTCACCATTCTCACAT+TGG 0.597986 1:+82898215 None:intergenic
ATACAAATCTTTCTCAGCAT+AGG 0.598094 1:+82898274 None:intergenic
AGGCTTCTTCCTGAGTTCGG+TGG 0.599749 1:-82898526 MsG0180004798.01.T01:CDS
GGCACATAACAGTTAGAGCA+TGG 0.600016 1:-82900821 MsG0180004798.01.T01:CDS
TGATTTATCCTCTCTCCTTG+AGG 0.602251 1:-82901012 MsG0180004798.01.T01:CDS
AAGGCTCAGGCCTCTGAGAG+GGG 0.603713 1:+82899064 None:intergenic
AGAATGACATGTGAAGGCTC+AGG 0.609075 1:+82899051 None:intergenic
AACAAGGGAGATAAGAGAGA+TGG 0.610075 1:-82897975 MsG0180004798.01.T01:CDS
GAAGTGGATGATACAGGGAA+AGG 0.611039 1:-82900645 MsG0180004798.01.T01:CDS
GTCTAAGTGTGGAACAATGT+TGG 0.612167 1:-82898429 MsG0180004798.01.T01:CDS
ATGTACTCTAACTCATCTAG+TGG 0.614715 1:-82902905 MsG0180004798.01.T01:CDS
GAACTCATCTCCGAAGACTC+CGG 0.615301 1:+82898874 None:intergenic
CAACCTGTGAACCATGACAC+TGG 0.615905 1:-82902851 MsG0180004798.01.T01:CDS
AACTACATCCTCAAGGAGAG+AGG 0.617424 1:+82901004 None:intergenic
AGACATTGGTATTGTGGACA+AGG 0.619613 1:-82899274 MsG0180004798.01.T01:CDS
TGTTCAAGAGGGTTTAACCA+AGG 0.619844 1:-82898182 MsG0180004798.01.T01:CDS
GGATGGGTTTGAGGCAACAA+GGG 0.621462 1:-82897990 MsG0180004798.01.T01:CDS
GTACTCTAACTCATCTAGTG+GGG 0.623166 1:-82902903 MsG0180004798.01.T01:CDS
AACATGGTGTCAATGAGGCA+AGG 0.632743 1:+82903512 None:intergenic
AGTGTGGAACAATGTTGGAA+GGG 0.632865 1:-82898424 MsG0180004798.01.T01:CDS
CTAGAATCAACAGAATAGGA+GGG 0.634091 1:-82902682 MsG0180004798.01.T01:CDS
AGTTAGAGCATGGACTCAGA+AGG 0.635220 1:-82900811 MsG0180004798.01.T01:CDS
ACAAATCAACTACATCCTCA+AGG 0.638614 1:+82900997 None:intergenic
AATACAAAATCCATAAGACA+TGG 0.641986 1:+82900669 None:intergenic
GCTGTGAGAACTGTTCAAGA+GGG 0.647146 1:-82898193 MsG0180004798.01.T01:CDS
TACTCTAACTCATCTAGTGG+GGG 0.650632 1:-82902902 MsG0180004798.01.T01:CDS
CTTGGTGTGAACATCAGAGA+AGG 0.651051 1:+82903318 None:intergenic
CCAATGTGAGAATGGTGAAG+AGG 0.657628 1:-82898215 MsG0180004798.01.T01:CDS
TGAAGGCTCAGGCCTCTGAG+AGG 0.658399 1:+82899062 None:intergenic
TGAAAGTGTGTGTCTAAGTG+TGG 0.660501 1:-82898440 MsG0180004798.01.T01:CDS
TGTGAACCATGACACTGGAA+TGG 0.664217 1:-82902846 MsG0180004798.01.T01:CDS
ATACCAACATGGTGTCAATG+AGG 0.665423 1:+82903507 None:intergenic
ATTAAGATATAATCATAAGG+AGG 0.668188 1:+82898148 None:intergenic
AATTGGACAGATGCCAGTGA+AGG 0.672213 1:-82898011 MsG0180004798.01.T01:intron
TATGAGATTTGTGTCAAGTG+AGG 0.675612 1:+82902986 None:intergenic
GAAATCCATTCCAGTCTCAG+TGG 0.681772 1:+82897892 None:intergenic
TAGAATCAACAGAATAGGAG+GGG 0.688378 1:-82902681 MsG0180004798.01.T01:CDS
TCCATGTTAGCCCCTCTCAG+AGG 0.694979 1:-82899074 MsG0180004798.01.T01:CDS
CTTCTCTGATGTTCACACCA+AGG 0.706528 1:-82903317 MsG0180004798.01.T01:intron
GTGACCATGAGATACCAACA+TGG 0.814649 1:+82903496 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAGTAGTAAAATTATTTTT+TGG + Chr1:82899370-82899389 None:intergenic 10.0%
!!! AACTAATTTTATTAAATAAC+AGG - Chr1:82899894-82899913 MsG0180004798.01.T01:intron 10.0%
!!! AAGTAGTAAAATTATTTTTT+GGG + Chr1:82899369-82899388 None:intergenic 10.0%
!! ATAAGCAAACAAAATATTTA+TGG + Chr1:82898324-82898343 None:intergenic 15.0%
!! CATTTAATAAAAATGTCAAA+TGG - Chr1:82902258-82902277 MsG0180004798.01.T01:intron 15.0%
!!! AAAATATTTATGGTTTTGAA+GGG + Chr1:82898314-82898333 None:intergenic 15.0%
!!! AATTGTTAATTTTTTCTCTA+GGG + Chr1:82902442-82902461 None:intergenic 15.0%
!!! ATAACTTAAGCTTTATATTT+TGG - Chr1:82903522-82903541 MsG0180004798.01.T01:CDS 15.0%
!!! ATGATTTTTTTACAACTAAA+AGG + Chr1:82902241-82902260 None:intergenic 15.0%
!!! GTGTTAAATTTTCAAATTAT+GGG + Chr1:82899662-82899681 None:intergenic 15.0%
!!! TGATTTTTTTACAACTAAAA+GGG + Chr1:82902240-82902259 None:intergenic 15.0%
!!! TGTGTTAAATTTTCAAATTA+TGG + Chr1:82899663-82899682 None:intergenic 15.0%
!!! TTTTATTTTGTTACAATCTT+AGG - Chr1:82900478-82900497 MsG0180004798.01.T01:intron 15.0%
!! AAATGTTTGATATATAAGAG+AGG + Chr1:82901332-82901351 None:intergenic 20.0%
!! AAGAAGATCAAAAAAGAAAA+GGG - Chr1:82902660-82902679 MsG0180004798.01.T01:CDS 20.0%
!! AGTTCATATATGATATAGAA+AGG - Chr1:82902057-82902076 MsG0180004798.01.T01:intron 20.0%
!! AGTTGTTACTAATTCAAAAT+TGG - Chr1:82900224-82900243 MsG0180004798.01.T01:intron 20.0%
!! ATATATGATATAGAAAGGTT+AGG - Chr1:82902062-82902081 MsG0180004798.01.T01:intron 20.0%
!! ATGATAATCAAAACAAAACT+TGG + Chr1:82902846-82902865 None:intergenic 20.0%
!! ATTAAGATATAATCATAAGG+AGG + Chr1:82903437-82903456 None:intergenic 20.0%
!! ATTAGTAACAACTAATTTAG+AGG + Chr1:82900217-82900236 None:intergenic 20.0%
!! CTATCATTAAAATCATCAAA+CGG + Chr1:82899051-82899070 None:intergenic 20.0%
!! GTTAGTTAATATACTACTAT+TGG + Chr1:82899293-82899312 None:intergenic 20.0%
!! TCCATTAAGATATAATCATA+AGG + Chr1:82903440-82903459 None:intergenic 20.0%
!! TCCTTATGATTATATCTTAA+TGG - Chr1:82903436-82903455 MsG0180004798.01.T01:CDS 20.0%
!! TTAAGATTCAAATCATGAAT+TGG + Chr1:82902196-82902215 None:intergenic 20.0%
!! TTAATTTATTTGCACTTTGT+AGG - Chr1:82898538-82898557 MsG0180004798.01.T01:CDS 20.0%
!! TTATGGAATGTGTTTATAAA+CGG + Chr1:82899546-82899565 None:intergenic 20.0%
!! TTCAATGCTTGAAATAATAA+CGG + Chr1:82898569-82898588 None:intergenic 20.0%
!! TTGTACTAAATAGTATATCA+CGG + Chr1:82900417-82900436 None:intergenic 20.0%
!!! AAAGTACTATTTGGTATTTT+CGG + Chr1:82899343-82899362 None:intergenic 20.0%
!!! AAATATCTTTGTAGCTTTAA+TGG - Chr1:82898514-82898533 MsG0180004798.01.T01:CDS 20.0%
!!! ATTATCCATTTGTTTTAAGT+TGG + Chr1:82900283-82900302 None:intergenic 20.0%
!!! ATTATTTGTTGTGTTATTGT+AGG - Chr1:82898028-82898047 MsG0180004798.01.T01:intron 20.0%
!!! CAAAATATTTATGGTTTTGA+AGG + Chr1:82898315-82898334 None:intergenic 20.0%
!!! GAATTGTTAATTTTTTCTCT+AGG + Chr1:82902443-82902462 None:intergenic 20.0%
!!! TAATGTAGTTAACAACTTTT+TGG - Chr1:82901965-82901984 MsG0180004798.01.T01:intron 20.0%
!!! TCTTTGAGTTAAAACTATTA+AGG + Chr1:82899749-82899768 None:intergenic 20.0%
!!! TTGATTTGTAACAAAGATTA+AGG - Chr1:82897944-82897963 MsG0180004798.01.T01:CDS 20.0%
! AAAAACTTCTTTCCACTTAA+TGG + Chr1:82903272-82903291 None:intergenic 25.0%
! AAGGGAAATTATACAAGAAA+TGG + Chr1:82898296-82898315 None:intergenic 25.0%
! AATACAAAATCCATAAGACA+TGG + Chr1:82900916-82900935 None:intergenic 25.0%
! AATCCAAGTCATAAAGAAAA+GGG - Chr1:82899958-82899977 MsG0180004798.01.T01:intron 25.0%
! ACATTTCAATCAAACCAATA+AGG + Chr1:82900194-82900213 None:intergenic 25.0%
! AGGGAAATTATACAAGAAAT+GGG + Chr1:82898295-82898314 None:intergenic 25.0%
! ATCTTACAAAGCTTAGAAAA+TGG + Chr1:82902885-82902904 None:intergenic 25.0%
! ATGACATTTGTGAACATATT+TGG + Chr1:82899827-82899846 None:intergenic 25.0%
! ATGTTCAAGAAGAAAAACAA+TGG - Chr1:82902813-82902832 MsG0180004798.01.T01:CDS 25.0%
! CAAGAAGATCAAAAAAGAAA+AGG - Chr1:82902659-82902678 MsG0180004798.01.T01:CDS 25.0%
! CTGTTAAATTTACTGATGAA+GGG - Chr1:82900740-82900759 MsG0180004798.01.T01:CDS 25.0%
! GATGGAAAAGTTATTGTAAA+AGG - Chr1:82899013-82899032 MsG0180004798.01.T01:CDS 25.0%
! TAATCCAAGTCATAAAGAAA+AGG - Chr1:82899957-82899976 MsG0180004798.01.T01:intron 25.0%
! TACAAAATATTGTTAACGAG+CGG - Chr1:82900432-82900451 MsG0180004798.01.T01:intron 25.0%
! TCTATTCCCATAATATCAAT+GGG + Chr1:82899201-82899220 None:intergenic 25.0%
! TGATATTATGGGAATAGAAT+CGG - Chr1:82899203-82899222 MsG0180004798.01.T01:CDS 25.0%
! TGTTTCATTAGAATGAATCA+AGG + Chr1:82901935-82901954 None:intergenic 25.0%
! TTAGTTGTCAATTCATTTAG+AGG - Chr1:82901128-82901147 MsG0180004798.01.T01:intron 25.0%
! TTCTATTCCCATAATATCAA+TGG + Chr1:82899202-82899221 None:intergenic 25.0%
!! AAGTACTATTTGGTATTTTC+GGG + Chr1:82899342-82899361 None:intergenic 25.0%
!! AGTTTTCTATTCTTGAATGT+TGG - Chr1:82900030-82900049 MsG0180004798.01.T01:intron 25.0%
!! ATTAAGTGGAAAGAAGTTTT+TGG - Chr1:82903271-82903290 MsG0180004798.01.T01:intron 25.0%
!! GATAGTGTTGTTAGATATTA+TGG + Chr1:82898774-82898793 None:intergenic 25.0%
!! TACAATAACTTTTCCATCTT+TGG + Chr1:82899011-82899030 None:intergenic 25.0%
!! TATGGATTTTGTATTTGAAG+TGG - Chr1:82900921-82900940 MsG0180004798.01.T01:CDS 25.0%
!! TTAACTTTTCCACAATGAAT+TGG - Chr1:82903554-82903573 MsG0180004798.01.T01:intron 25.0%
!!! AATGTCAAATGGTTTTTTCT+AGG - Chr1:82902269-82902288 MsG0180004798.01.T01:intron 25.0%
!!! TTAATTTTTTCTCTAGGGTT+TGG + Chr1:82902437-82902456 None:intergenic 25.0%
!!! TTATATCTTAATGGATTGTC+AGG - Chr1:82903445-82903464 MsG0180004798.01.T01:CDS 25.0%
!!! TTTGTTGATGATGATTTCAT+TGG + Chr1:82898200-82898219 None:intergenic 25.0%
!!! TTTTTTTACAACTAAAAGGG+AGG + Chr1:82902237-82902256 None:intergenic 25.0%
AAAGACAAAAGAGAAGTGAT+TGG + Chr1:82902005-82902024 None:intergenic 30.0%
AACAATCTACTACCATGAAA+TGG + Chr1:82903026-82903045 None:intergenic 30.0%
ACAAAAGTCCTATGTTAATC+TGG - Chr1:82903184-82903203 MsG0180004798.01.T01:intron 30.0%
ACAAATCTCATACATAGGAA+TGG - Chr1:82898607-82898626 MsG0180004798.01.T01:CDS 30.0%
AGAGTCATATTGTTTGTGTT+GGG + Chr1:82901867-82901886 None:intergenic 30.0%
AGGTGACATTAGTAGAATTA+AGG + Chr1:82898247-82898266 None:intergenic 30.0%
AGTAAATGCTCTTTCTTGAT+AGG + Chr1:82903728-82903747 None:intergenic 30.0%
ATACAAATCTTTCTCAGCAT+AGG + Chr1:82903311-82903330 None:intergenic 30.0%
ATGATTTACCTAGCAAATCT+TGG + Chr1:82900311-82900330 None:intergenic 30.0%
ATGTAAAGAATGACATGTGA+AGG + Chr1:82902540-82902559 None:intergenic 30.0%
ATTATCATTGATGCAAATGC+AGG - Chr1:82902858-82902877 MsG0180004798.01.T01:CDS 30.0%
ATTCAAGCTGTTAATGGTAA+TGG - Chr1:82899078-82899097 MsG0180004798.01.T01:CDS 30.0%
ATTTATTTGCACTTTGTAGG+TGG - Chr1:82898541-82898560 MsG0180004798.01.T01:CDS 30.0%
CAAAAGTCCTATGTTAATCT+GGG - Chr1:82903185-82903204 MsG0180004798.01.T01:intron 30.0%
CAAGTTAAAGAGAATTCTGT+TGG - Chr1:82901003-82901022 MsG0180004798.01.T01:CDS 30.0%
CATTCTTTACATTACTGATG+AGG - Chr1:82902548-82902567 MsG0180004798.01.T01:CDS 30.0%
CTAGTGTTTGGATTAAGTAT+AGG + Chr1:82901611-82901630 None:intergenic 30.0%
CTAGTGTTTGTATCAAGTAT+AGG + Chr1:82901475-82901494 None:intergenic 30.0%
CTATCAATATTGATGCAAGT+TGG - Chr1:82898789-82898808 MsG0180004798.01.T01:CDS 30.0%
CTATTCCCATAATATCAATG+GGG + Chr1:82899200-82899219 None:intergenic 30.0%
GACTCTTATCGTCTATAAAT+AGG + Chr1:82901357-82901376 None:intergenic 30.0%
GCTACCAATGTTGTTAAATA+GGG - Chr1:82900342-82900361 MsG0180004798.01.T01:intron 30.0%
GCTGTTAAATTTACTGATGA+AGG - Chr1:82900739-82900758 MsG0180004798.01.T01:CDS 30.0%
GGTGACATTAGTAGAATTAA+GGG + Chr1:82898246-82898265 None:intergenic 30.0%
GTGATATCAAAACCATTTCA+TGG - Chr1:82903011-82903030 MsG0180004798.01.T01:CDS 30.0%
GTTTCAATTCAAGCTGTTAA+TGG - Chr1:82899072-82899091 MsG0180004798.01.T01:CDS 30.0%
TAATCAACACTACTCTCAAA+AGG + Chr1:82902966-82902985 None:intergenic 30.0%
TAGAGTCATATTGTTTGTGT+TGG + Chr1:82901868-82901887 None:intergenic 30.0%
TATCATCTTGATCAATTGCT+TGG + Chr1:82902989-82903008 None:intergenic 30.0%
TATGCTGAGAAAGATTTGTA+TGG - Chr1:82903310-82903329 MsG0180004798.01.T01:intron 30.0%
TATGTTAATCTGGGAAGAAA+AGG - Chr1:82903194-82903213 MsG0180004798.01.T01:intron 30.0%
TCAAGGGACAAAATCATATT+TGG - Chr1:82898982-82899001 MsG0180004798.01.T01:CDS 30.0%
TCAATCCTAGTAAAGTTGTT+TGG - Chr1:82902931-82902950 MsG0180004798.01.T01:CDS 30.0%
TCACATGAATTTGCATCATT+GGG - Chr1:82898833-82898852 MsG0180004798.01.T01:CDS 30.0%
TGATTTACCTAGCAAATCTT+GGG + Chr1:82900310-82900329 None:intergenic 30.0%
TGCTACCAATGTTGTTAAAT+AGG - Chr1:82900341-82900360 MsG0180004798.01.T01:intron 30.0%
TTCACATGAATTTGCATCAT+TGG - Chr1:82898832-82898851 MsG0180004798.01.T01:CDS 30.0%
TTCTGAACTTGGTTTCAAAT+TGG + Chr1:82900253-82900272 None:intergenic 30.0%
TTCTTTCCACTTAATGGTTT+AGG + Chr1:82903266-82903285 None:intergenic 30.0%
TTGACACAAATCTCATACAT+AGG - Chr1:82898602-82898621 MsG0180004798.01.T01:CDS 30.0%
TTTGCTAGGTAAATCATCAT+AGG - Chr1:82900314-82900333 MsG0180004798.01.T01:intron 30.0%
! AATCCCTTTTCTTTATGACT+TGG + Chr1:82899964-82899983 None:intergenic 30.0%
! AGTCTTGGATTTTTGCAATT+TGG + Chr1:82900797-82900816 None:intergenic 30.0%
! ATTGATGCAAGTTGGATAAA+TGG - Chr1:82898797-82898816 MsG0180004798.01.T01:CDS 30.0%
! CACACATTTTACCCATTTAT+AGG - Chr1:82901386-82901405 MsG0180004798.01.T01:CDS 30.0%
! TATTTGAAGTGGATGATACA+GGG - Chr1:82900932-82900951 MsG0180004798.01.T01:CDS 30.0%
! TTTGAAACCAAGTTCAGAAT+TGG - Chr1:82900254-82900273 MsG0180004798.01.T01:intron 30.0%
! TTTGGGTACAAAGTACTATT+TGG + Chr1:82899352-82899371 None:intergenic 30.0%
! TTTTCACAAAACATCTCTCT+TGG - Chr1:82899437-82899456 MsG0180004798.01.T01:intron 30.0%
! TTTTCTTCCCAGATTAACAT+AGG + Chr1:82903195-82903214 None:intergenic 30.0%
! TTTTTCACACACTACAATGA+TGG - Chr1:82898638-82898657 MsG0180004798.01.T01:CDS 30.0%
!! ATGGTAATGGAGATCTAATA+AGG - Chr1:82899091-82899110 MsG0180004798.01.T01:CDS 30.0%
!!! ATTTTTTTTTCTTTTCGCGC+TGG + Chr1:82898498-82898517 None:intergenic 30.0%
!!! TATTTTCGGGTACAAAAGTA+CGG + Chr1:82899329-82899348 None:intergenic 30.0%
AAAAATGCAACTAGAGGAAG+AGG - Chr1:82900543-82900562 MsG0180004798.01.T01:CDS 35.0%
AAATGGGTAAAATGTGTGAG+TGG + Chr1:82901384-82901403 None:intergenic 35.0%
AAGAGTTCCTTTCAAAGCTA+TGG - Chr1:82902764-82902783 MsG0180004798.01.T01:CDS 35.0%
AAGATTTCACAACACTCTTG+TGG + Chr1:82900822-82900841 None:intergenic 35.0%
AATGTACTCTAGATTTGCGA+AGG - Chr1:82898457-82898476 MsG0180004798.01.T01:CDS 35.0%
ACAAATCAACTACATCCTCA+AGG + Chr1:82900588-82900607 None:intergenic 35.0%
ACTATTGACCAATGTGAGAA+TGG - Chr1:82903359-82903378 MsG0180004798.01.T01:CDS 35.0%
ACTCATACGTGAAATTGATG+TGG - Chr1:82899635-82899654 MsG0180004798.01.T01:intron 35.0%
AGAAAAGGTTCTGTTCATCA+AGG - Chr1:82903209-82903228 MsG0180004798.01.T01:intron 35.0%
AGCAAAAGCAAGACTCTTAT+TGG + Chr1:82900136-82900155 None:intergenic 35.0%
AGCAAGATCATGAAAGATGA+AGG + Chr1:82897853-82897872 None:intergenic 35.0%
AGCAATCCTAAACCATTAAG+TGG - Chr1:82903257-82903276 MsG0180004798.01.T01:intron 35.0%
AGTTGTTCATAGAGAGCTTA+GGG - Chr1:82902589-82902608 MsG0180004798.01.T01:CDS 35.0%
ATCAAACATTCACGTGTGAA+AGG - Chr1:82900670-82900689 MsG0180004798.01.T01:CDS 35.0%
ATCTCATACATAGGAATGGA+AGG - Chr1:82898611-82898630 MsG0180004798.01.T01:CDS 35.0%
ATGCTCTTTCTTGATAGGTT+TGG + Chr1:82903723-82903742 None:intergenic 35.0%
ATGTACTCTAACTCATCTAG+TGG - Chr1:82898677-82898696 MsG0180004798.01.T01:CDS 35.0%
CAAGGTGAAATAGAAGAAAG+TGG - Chr1:82903227-82903246 MsG0180004798.01.T01:intron 35.0%
CATAAGACATGGATCTTGTT+GGG + Chr1:82900905-82900924 None:intergenic 35.0%
CATTATTGGGTGAATGCTTT+AGG - Chr1:82901201-82901220 MsG0180004798.01.T01:intron 35.0%
CTAGAATCAACAGAATAGGA+GGG - Chr1:82898900-82898919 MsG0180004798.01.T01:CDS 35.0%
GACAATGCGAGTGATATAAT+CGG + Chr1:82898957-82898976 None:intergenic 35.0%
GAGACAGTGAATTATGAGTA+TGG - Chr1:82902390-82902409 MsG0180004798.01.T01:intron 35.0%
GGAGACCAACTTAAAACAAA+TGG - Chr1:82900275-82900294 MsG0180004798.01.T01:intron 35.0%
GGAGATCTAATAAGGAATGA+GGG - Chr1:82899099-82899118 MsG0180004798.01.T01:CDS 35.0%
GTAGATTGTTCCAAGTCATT+AGG - Chr1:82903036-82903055 MsG0180004798.01.T01:intron 35.0%
GTGTTGTGAAATCTTTGTCT+TGG - Chr1:82900827-82900846 MsG0180004798.01.T01:CDS 35.0%
GTGTTTGGATTAAGTATAGG+AGG + Chr1:82901608-82901627 None:intergenic 35.0%
GTGTTTGTATCAAGTATAGG+AGG + Chr1:82901472-82901491 None:intergenic 35.0%
GTTGTATTGGACTCTTGTAA+TGG - Chr1:82900640-82900659 MsG0180004798.01.T01:CDS 35.0%
TACAAGAAATGGGTATACCT+TGG + Chr1:82898285-82898304 None:intergenic 35.0%
TAGAATCAACAGAATAGGAG+GGG - Chr1:82898901-82898920 MsG0180004798.01.T01:CDS 35.0%
TAGACACACACTTTCATCAT+TGG + Chr1:82903138-82903157 None:intergenic 35.0%
TATCAGTGATCAAAGTTCAC+CGG - Chr1:82902689-82902708 MsG0180004798.01.T01:CDS 35.0%
TATGAGATTTGTGTCAAGTG+AGG + Chr1:82898599-82898618 None:intergenic 35.0%
TCAGCTAGAATCAACAGAAT+AGG - Chr1:82898896-82898915 MsG0180004798.01.T01:CDS 35.0%
TCATATTTGGCTACCAAAGA+TGG - Chr1:82898995-82899014 MsG0180004798.01.T01:CDS 35.0%
TCCAACCAAACAACTTTACT+AGG + Chr1:82902939-82902958 None:intergenic 35.0%
TCCTAGTAAAGTTGTTTGGT+TGG - Chr1:82902935-82902954 MsG0180004798.01.T01:CDS 35.0%
TGCTACCCCATTGATATTAT+GGG - Chr1:82899192-82899211 MsG0180004798.01.T01:CDS 35.0%
TGGAGATCTAATAAGGAATG+AGG - Chr1:82899098-82899117 MsG0180004798.01.T01:CDS 35.0%
TGTACTCTAACTCATCTAGT+GGG - Chr1:82898678-82898697 MsG0180004798.01.T01:CDS 35.0%
TGTGATCTAGGTTCATTTCT+TGG + Chr1:82903107-82903126 None:intergenic 35.0%
TGTGCCCTATTTAACAACAT+TGG + Chr1:82900349-82900368 None:intergenic 35.0%
TTCATCTTTCATGATCTTGC+TGG - Chr1:82897852-82897871 MsG0180004798.01.T01:CDS 35.0%
TTGCTACCCCATTGATATTA+TGG - Chr1:82899191-82899210 MsG0180004798.01.T01:CDS 35.0%
TTGGATTAAGTATAGGAGGT+GGG + Chr1:82901604-82901623 None:intergenic 35.0%
TTTGGATTAAGTATAGGAGG+TGG + Chr1:82901605-82901624 None:intergenic 35.0%
! AAGATGAGAGATCCATTTTG+TGG + Chr1:82899937-82899956 None:intergenic 35.0%
! ACCTAATGCCTTAAGGTTTT+GGG + Chr1:82901766-82901785 None:intergenic 35.0%
! ACCTTAAGGCATTAGGTATA+TGG - Chr1:82901769-82901788 MsG0180004798.01.T01:intron 35.0%
! AGATGAGAGATCCATTTTGT+GGG + Chr1:82899936-82899955 None:intergenic 35.0%
! AGGAGGATTAGTAAAATCCT+TGG + Chr1:82903420-82903439 None:intergenic 35.0%
! ATGACACTGGAATGGTTTTT+GGG - Chr1:82898744-82898763 MsG0180004798.01.T01:CDS 35.0%
! CCTTAAGGCATTAGGTATAT+GGG - Chr1:82901770-82901789 MsG0180004798.01.T01:intron 35.0%
! GAAAGGTGTAGAAGTTGTAT+TGG - Chr1:82900627-82900646 MsG0180004798.01.T01:CDS 35.0%
! GTATTTGAAGTGGATGATAC+AGG - Chr1:82900931-82900950 MsG0180004798.01.T01:CDS 35.0%
! GTTGTGTTATTGTAGGCATA+TGG - Chr1:82898035-82898054 MsG0180004798.01.T01:intron 35.0%
! TACCTAATGCCTTAAGGTTT+TGG + Chr1:82901767-82901786 None:intergenic 35.0%
! TTTTTATTACCGAACTGTCG+TGG - Chr1:82898372-82898391 MsG0180004798.01.T01:CDS 35.0%
!! ACTGACTTGTGATTCTCTTT+AGG + Chr1:82900967-82900986 None:intergenic 35.0%
!! AGTTGATTTGTACCATCCAA+TGG - Chr1:82900597-82900616 MsG0180004798.01.T01:CDS 35.0%
!! GAAGAAAATAAAGAGTGCTG+AGG + Chr1:82897921-82897940 None:intergenic 35.0%
!! TCTTGATAGGTTTGGTAATG+TGG + Chr1:82903715-82903734 None:intergenic 35.0%
!!! ATTGTTGGGTTTTAAGTGAG+TGG + Chr1:82901427-82901446 None:intergenic 35.0%
!!! GCGAAGGAAATTCACTTTTT+CGG - Chr1:82898420-82898439 MsG0180004798.01.T01:CDS 35.0%
AACAAGGGAGATAAGAGAGA+TGG - Chr1:82903607-82903626 MsG0180004798.01.T01:intron 40.0%
AACAAGTGGTATTAGTGCCT+TGG + Chr1:82901665-82901684 None:intergenic 40.0%
AAGTATAGGAGGTGAGAACT+CGG + Chr1:82901461-82901480 None:intergenic 40.0%
AAGTGTGGAACAATGTTGGA+AGG - Chr1:82903157-82903176 MsG0180004798.01.T01:intron 40.0%
ACAATTCGTACTGCTAGTTC+TGG - Chr1:82902456-82902475 MsG0180004798.01.T01:intron 40.0%
ACACCTTTCTTCATTGCCAT+TGG + Chr1:82900616-82900635 None:intergenic 40.0%
ACTTGACACAAGCAAGATTG+AGG - Chr1:82900516-82900535 MsG0180004798.01.T01:intron 40.0%
AGACATTGGTATTGTGGACA+AGG - Chr1:82902308-82902327 MsG0180004798.01.T01:intron 40.0%
AGAGAGATGGAGAAACACTA+TGG - Chr1:82903620-82903639 MsG0180004798.01.T01:intron 40.0%
AGGCACTAATACCACTTGTT+GGG - Chr1:82901665-82901684 MsG0180004798.01.T01:CDS 40.0%
AGGGAGAATCTTGGGTTTAT+GGG + Chr1:82901571-82901590 None:intergenic 40.0%
AGTCTCACGTCACCTATAAA+TGG + Chr1:82901401-82901420 None:intergenic 40.0%
AGTGTGGAACAATGTTGGAA+GGG - Chr1:82903158-82903177 MsG0180004798.01.T01:intron 40.0%
ATTAGGCTTCTTCCTGAGTT+CGG - Chr1:82903053-82903072 MsG0180004798.01.T01:intron 40.0%
ATTCACGTGTGAAAGGTGAT+AGG - Chr1:82900677-82900696 MsG0180004798.01.T01:CDS 40.0%
CAAAAACCATTCCAGTGTCA+TGG + Chr1:82898745-82898764 None:intergenic 40.0%
CAAGATAAGCACGAAGATCA+TGG + Chr1:82900167-82900186 None:intergenic 40.0%
CACTGTCTCATTCTCACATA+AGG + Chr1:82902379-82902398 None:intergenic 40.0%
CAGTTGTTCATAGAGAGCTT+AGG - Chr1:82902588-82902607 MsG0180004798.01.T01:CDS 40.0%
CATCCAATGGCAATGAAGAA+AGG - Chr1:82900610-82900629 MsG0180004798.01.T01:CDS 40.0%
CCAACAAGATCCATGTCTTA+TGG - Chr1:82900903-82900922 MsG0180004798.01.T01:CDS 40.0%
CCATAAGACATGGATCTTGT+TGG + Chr1:82900906-82900925 None:intergenic 40.0%
CCCATATACCTAATGCCTTA+AGG + Chr1:82901773-82901792 None:intergenic 40.0%
CCTTTCAAAGCTATGGATCA+TGG - Chr1:82902771-82902790 MsG0180004798.01.T01:CDS 40.0%
CTCTTGTGGTTATGGAACAT+TGG + Chr1:82901723-82901742 None:intergenic 40.0%
CTTTCTTCATTGCCATTGGA+TGG + Chr1:82900612-82900631 None:intergenic 40.0%
GAGCTTAGGGATTAAAGTCA+AGG - Chr1:82902602-82902621 MsG0180004798.01.T01:CDS 40.0%
GCTAGAATCAACAGAATAGG+AGG - Chr1:82898899-82898918 MsG0180004798.01.T01:CDS 40.0%
GTACTCTAACTCATCTAGTG+GGG - Chr1:82898679-82898698 MsG0180004798.01.T01:CDS 40.0%
GTCTAAGTGTGGAACAATGT+TGG - Chr1:82903153-82903172 MsG0180004798.01.T01:intron 40.0%
GTCTATGTCTCTTGTGGTTA+TGG + Chr1:82901731-82901750 None:intergenic 40.0%
GTCTCACATTGCCTATGAAT+AGG + Chr1:82901824-82901843 None:intergenic 40.0%
GTCTCACGTCACCTATAAAT+GGG + Chr1:82901400-82901419 None:intergenic 40.0%
TACTCTAACTCATCTAGTGG+GGG - Chr1:82898680-82898699 MsG0180004798.01.T01:CDS 40.0%
TATGAGTATGGATCAACCTC+AGG - Chr1:82902402-82902421 MsG0180004798.01.T01:intron 40.0%
TGATTTATCCTCTCTCCTTG+AGG - Chr1:82900570-82900589 MsG0180004798.01.T01:CDS 40.0%
TGTTCAAGAGGGTTTAACCA+AGG - Chr1:82903400-82903419 MsG0180004798.01.T01:CDS 40.0%
TTCTAGGTACGTTTGATGCA+TGG - Chr1:82902285-82902304 MsG0180004798.01.T01:intron 40.0%
TTGGTCTCCAATTCTGAACT+TGG + Chr1:82900264-82900283 None:intergenic 40.0%
TTGTTAACGAGCGGCTATAA+TGG - Chr1:82900441-82900460 MsG0180004798.01.T01:intron 40.0%
! AAGGCACTAATACCACTTGT+TGG - Chr1:82901664-82901683 MsG0180004798.01.T01:CDS 40.0%
! AATTGTGCCCAAGATTTGCT+AGG - Chr1:82900300-82900319 MsG0180004798.01.T01:intron 40.0%
! ACCCAAAACCTTAAGGCATT+AGG - Chr1:82901762-82901781 MsG0180004798.01.T01:intron 40.0%
! ATACCAACATGGTGTCAATG+AGG + Chr1:82898078-82898097 None:intergenic 40.0%
! CATGACACTGGAATGGTTTT+TGG - Chr1:82898743-82898762 MsG0180004798.01.T01:CDS 40.0%
! TGAAAGTGTGTGTCTAAGTG+TGG - Chr1:82903142-82903161 MsG0180004798.01.T01:intron 40.0%
! TGACACTGGAATGGTTTTTG+GGG - Chr1:82898745-82898764 MsG0180004798.01.T01:CDS 40.0%
!! AACACTCTTGTGGTTAGTCT+TGG + Chr1:82900812-82900831 None:intergenic 40.0%
!! ATGGCTACTTTGAGATCTCT+TGG - Chr1:82903329-82903348 MsG0180004798.01.T01:CDS 40.0%
!! CCATGATCCATAGCTTTGAA+AGG + Chr1:82902774-82902793 None:intergenic 40.0%
!! GTTTGTGTTGGGTTTCTAGT+AGG + Chr1:82901856-82901875 None:intergenic 40.0%
!!! TAATGCCTTAAGGTTTTGGG+TGG + Chr1:82901763-82901782 None:intergenic 40.0%
AACAAGTGGTTGCAATGTGC+TGG + Chr1:82901531-82901550 None:intergenic 45.0%
AACTACATCCTCAAGGAGAG+AGG + Chr1:82900581-82900600 None:intergenic 45.0%
AATTGGACAGATGCCAGTGA+AGG - Chr1:82903571-82903590 MsG0180004798.01.T01:intron 45.0%
ACTCACTTGAGGGAGAATCT+TGG + Chr1:82901580-82901599 None:intergenic 45.0%
ACTTGGGATTGTGCAGTCAT+TGG - Chr1:82901047-82901066 MsG0180004798.01.T01:CDS 45.0%
AGAATGACATGTGAAGGCTC+AGG + Chr1:82902534-82902553 None:intergenic 45.0%
AGCACATTGCAACCACTTGT+TGG - Chr1:82901530-82901549 MsG0180004798.01.T01:CDS 45.0%
AGTCTTCGGAGATGAGTTCT+AGG - Chr1:82902712-82902731 MsG0180004798.01.T01:CDS 45.0%
AGTTAGAGCATGGACTCAGA+AGG - Chr1:82900771-82900790 MsG0180004798.01.T01:CDS 45.0%
ATAATGCTCCTGACTCTCCT+CGG + Chr1:82901187-82901206 None:intergenic 45.0%
ATCCAATTACCACCGAACTC+AGG + Chr1:82903068-82903087 None:intergenic 45.0%
ATTAGTGCCTTGGTTCAGCT+TGG + Chr1:82901655-82901674 None:intergenic 45.0%
ATTCCAGTGTCATGGTTCAC+AGG + Chr1:82898737-82898756 None:intergenic 45.0%
CACACACTTTCATCATTGGC+AGG + Chr1:82903134-82903153 None:intergenic 45.0%
CAGGAAGAAGCCTAATGACT+TGG + Chr1:82903049-82903068 None:intergenic 45.0%
CATCTCCACCCAAAACCTTA+AGG - Chr1:82901755-82901774 MsG0180004798.01.T01:intron 45.0%
CCAATGTGAGAATGGTGAAG+AGG - Chr1:82903367-82903386 MsG0180004798.01.T01:CDS 45.0%
CCTCTTCACCATTCTCACAT+TGG + Chr1:82903370-82903389 None:intergenic 45.0%
CGTTTGATGCATGGAGACAT+TGG - Chr1:82902294-82902313 MsG0180004798.01.T01:intron 45.0%
CTCACTTGAGGGAGAATCTT+GGG + Chr1:82901579-82901598 None:intergenic 45.0%
CTCTCTCTCTCTCTCTCTTA+TGG + Chr1:82901228-82901247 None:intergenic 45.0%
CTTCTCTGATGTTCACACCA+AGG - Chr1:82898265-82898284 MsG0180004798.01.T01:CDS 45.0%
GAAATCCATTCCAGTCTCAG+TGG + Chr1:82903693-82903712 None:intergenic 45.0%
GAAGTGGATGATACAGGGAA+AGG - Chr1:82900937-82900956 MsG0180004798.01.T01:CDS 45.0%
GACAAGGAAGTTGGCAAAAG+AGG - Chr1:82902324-82902343 MsG0180004798.01.T01:intron 45.0%
GACACCATGTTGGTATCTCA+TGG - Chr1:82898082-82898101 MsG0180004798.01.T01:intron 45.0%
GAGAATTCTGTTGGCCAAGT+AGG - Chr1:82901012-82901031 MsG0180004798.01.T01:CDS 45.0%
GAGGGAGAATCTTGGGTTTA+TGG + Chr1:82901572-82901591 None:intergenic 45.0%
GATCTTCGTGCTTATCTTGC+AGG - Chr1:82900168-82900187 MsG0180004798.01.T01:intron 45.0%
GCACATTGCAACCACTTGTT+GGG - Chr1:82901531-82901550 MsG0180004798.01.T01:CDS 45.0%
GCATGGAGACATTGGTATTG+TGG - Chr1:82902302-82902321 MsG0180004798.01.T01:intron 45.0%
GCTGTGAGAACTGTTCAAGA+GGG - Chr1:82903389-82903408 MsG0180004798.01.T01:CDS 45.0%
GGAAGTGGGATTCTAGTGTT+TGG + Chr1:82901623-82901642 None:intergenic 45.0%
GGCACATAACAGTTAGAGCA+TGG - Chr1:82900761-82900780 MsG0180004798.01.T01:CDS 45.0%
GGCAGGAAAAATGCAACTAG+AGG - Chr1:82900537-82900556 MsG0180004798.01.T01:CDS 45.0%
GGCATCTGTCCAATTCATTG+TGG + Chr1:82903566-82903585 None:intergenic 45.0%
GGGAGAATCTTGGGTTTATG+GGG + Chr1:82901570-82901589 None:intergenic 45.0%
GGTATTGTGGACAAGGAAGT+TGG - Chr1:82902315-82902334 MsG0180004798.01.T01:intron 45.0%
GTGACCATGAGATACCAACA+TGG + Chr1:82898089-82898108 None:intergenic 45.0%
GTGTTAGCTGTCCCACAAAA+TGG - Chr1:82899922-82899941 MsG0180004798.01.T01:intron 45.0%
TAAGTAGTTCGAGATCGCGA+AGG - Chr1:82898404-82898423 MsG0180004798.01.T01:CDS 45.0%
TCAAAGTTCACCGGAGTCTT+CGG - Chr1:82902698-82902717 MsG0180004798.01.T01:CDS 45.0%
TCTTGCAAGGATCAAGCTGT+TGG - Chr1:82899129-82899148 MsG0180004798.01.T01:CDS 45.0%
TGGGGAATCTGAGGAAACAT+CGG - Chr1:82901684-82901703 MsG0180004798.01.T01:intron 45.0%
TGTGAACCATGACACTGGAA+TGG - Chr1:82898736-82898755 MsG0180004798.01.T01:CDS 45.0%
TGTGGTGTCTATGTCTCTTG+TGG + Chr1:82901737-82901756 None:intergenic 45.0%
TTGCCTCATTGACACCATGT+TGG - Chr1:82898072-82898091 MsG0180004798.01.T01:intron 45.0%
TTGGCAGGTACTTGTGATCT+AGG + Chr1:82903119-82903138 None:intergenic 45.0%
! AACATGGTGTCAATGAGGCA+AGG + Chr1:82898073-82898092 None:intergenic 45.0%
! CTTGGTGTGAACATCAGAGA+AGG + Chr1:82898267-82898286 None:intergenic 45.0%
! CTTTCTCTCAGCTTGTTCTG+TGG + Chr1:82900109-82900128 None:intergenic 45.0%
! GCTTATCTTGCAGGCCTTAT+TGG - Chr1:82900177-82900196 MsG0180004798.01.T01:intron 45.0%
! GGCACTAATACCACTTGTTG+GGG - Chr1:82901666-82901685 MsG0180004798.01.T01:CDS 45.0%
! TTCCTGAGTTCGGTGGTAAT+TGG - Chr1:82903063-82903082 MsG0180004798.01.T01:intron 45.0%
!! AGGAGAGTCAGGAGCATTAT+TGG - Chr1:82901187-82901206 MsG0180004798.01.T01:intron 45.0%
!! GGAGAGTCAGGAGCATTATT+GGG - Chr1:82901188-82901207 MsG0180004798.01.T01:intron 45.0%
!!! GGTTTGGTTTTTGTCACCTG+AGG + Chr1:82902421-82902440 None:intergenic 45.0%
!!! TAAGGTTTTGGGTGGAGATG+TGG + Chr1:82901755-82901774 None:intergenic 45.0%
!!! ATTTGAATATTTTTTTTTTA+TGG + Chr1:82899563-82899582 None:intergenic 5.0%
ACAATCTGTTAGAGAGCCCG+AGG - Chr1:82901167-82901186 MsG0180004798.01.T01:intron 50.0%
ACTCGCATTGTCGATCGTCA+AGG - Chr1:82898965-82898984 MsG0180004798.01.T01:CDS 50.0%
AGAATAGGAGGGGTCTCTCT+TGG - Chr1:82898911-82898930 MsG0180004798.01.T01:CDS 50.0%
CAACCTGTGAACCATGACAC+TGG - Chr1:82898731-82898750 MsG0180004798.01.T01:CDS 50.0%
CAGTGTCATGGTTCACAGGT+TGG + Chr1:82898733-82898752 None:intergenic 50.0%
CCACTTTGACCACGACAGTT+CGG + Chr1:82898384-82898403 None:intergenic 50.0%
CGGTTGAGGGAGAGATTGTT+GGG + Chr1:82901441-82901460 None:intergenic 50.0%
CTCGCATTGTCGATCGTCAA+GGG - Chr1:82898966-82898985 MsG0180004798.01.T01:CDS 50.0%
CTTGGTGGAAGAGTGGAAGT+GGG + Chr1:82901637-82901656 None:intergenic 50.0%
GAACTCATCTCCGAAGACTC+CGG + Chr1:82902711-82902730 None:intergenic 50.0%
GACACAAGCAAGATTGAGGC+AGG - Chr1:82900520-82900539 MsG0180004798.01.T01:intron 50.0%
GACAGATGCCAGTGAAGGAT+GGG - Chr1:82903576-82903595 MsG0180004798.01.T01:intron 50.0%
GGAATCTGAGGAAACATCGG+GGG - Chr1:82901687-82901706 MsG0180004798.01.T01:intron 50.0%
GGCTGTGAGAACTGTTCAAG+AGG - Chr1:82903388-82903407 MsG0180004798.01.T01:CDS 50.0%
GGGAATCTGAGGAAACATCG+GGG - Chr1:82901686-82901705 MsG0180004798.01.T01:intron 50.0%
GGGGAATCTGAGGAAACATC+GGG - Chr1:82901685-82901704 MsG0180004798.01.T01:intron 50.0%
TAATGCTCCTGACTCTCCTC+GGG + Chr1:82901186-82901205 None:intergenic 50.0%
TCCTCAGATTCCCCAACAAG+TGG + Chr1:82901679-82901698 None:intergenic 50.0%
TCGGTTGAGGGAGAGATTGT+TGG + Chr1:82901442-82901461 None:intergenic 50.0%
TCTGTTGGCCAAGTAGGAAC+TGG - Chr1:82901018-82901037 MsG0180004798.01.T01:CDS 50.0%
TCTTCCACCAAGCTGAACCA+AGG - Chr1:82901645-82901664 MsG0180004798.01.T01:CDS 50.0%
TGAGGGAGCTGTATCTTGCA+AGG - Chr1:82899116-82899135 MsG0180004798.01.T01:CDS 50.0%
! ACCACTTGTTGGGGAATCTG+AGG - Chr1:82901675-82901694 MsG0180004798.01.T01:intron 50.0%
! AGGATGGGTTTGAGGCAACA+AGG - Chr1:82903591-82903610 MsG0180004798.01.T01:intron 50.0%
! CATTGCAACCACTTGTTGGG+CGG - Chr1:82901534-82901553 MsG0180004798.01.T01:CDS 50.0%
! GAGGGGCTAACATGGAGTTT+TGG + Chr1:82902504-82902523 None:intergenic 50.0%
! GGATGGGTTTGAGGCAACAA+GGG - Chr1:82903592-82903611 MsG0180004798.01.T01:intron 50.0%
!! GTGGTTGCAATGTGCTGGTT+CGG + Chr1:82901526-82901545 None:intergenic 50.0%
!! TAGGAACTGGCTTGGGACTT+GGG - Chr1:82901031-82901050 MsG0180004798.01.T01:CDS 50.0%
AGGAGGTGAGAACTCGGTTG+AGG + Chr1:82901455-82901474 None:intergenic 55.0%
AGGAGGTGGGAACTCACTTG+AGG + Chr1:82901591-82901610 None:intergenic 55.0%
AGGCTTCTTCCTGAGTTCGG+TGG - Chr1:82903056-82903075 MsG0180004798.01.T01:intron 55.0%
AGTGCCTTGGTTCAGCTTGG+TGG + Chr1:82901652-82901671 None:intergenic 55.0%
CCGAACTGTCGTGGTCAAAG+TGG - Chr1:82898381-82898400 MsG0180004798.01.T01:CDS 55.0%
CTCGGTGGAAGAGTGGAAGT+GGG + Chr1:82901503-82901522 None:intergenic 55.0%
GACAAGCTGACCACTGAGAC+TGG - Chr1:82903680-82903699 MsG0180004798.01.T01:intron 55.0%
GCCTCAAACCCATCCTTCAC+TGG + Chr1:82903587-82903606 None:intergenic 55.0%
GCTGACCACTGAGACTGGAA+TGG - Chr1:82903685-82903704 MsG0180004798.01.T01:intron 55.0%
GGACAGATGCCAGTGAAGGA+TGG - Chr1:82903575-82903594 MsG0180004798.01.T01:intron 55.0%
GGAGGTGAGAACTCGGTTGA+GGG + Chr1:82901454-82901473 None:intergenic 55.0%
GGAGGTGGGAACTCACTTGA+GGG + Chr1:82901590-82901609 None:intergenic 55.0%
GTCCCAAGCCAGTTCCTACT+TGG + Chr1:82901029-82901048 None:intergenic 55.0%
TCCATGTTAGCCCCTCTCAG+AGG - Chr1:82902508-82902527 MsG0180004798.01.T01:intron 55.0%
TGGCCAAGTAGGAACTGGCT+TGG - Chr1:82901023-82901042 MsG0180004798.01.T01:CDS 55.0%
! GCCAGTGAAGGATGGGTTTG+AGG - Chr1:82903583-82903602 MsG0180004798.01.T01:intron 55.0%
! GCTTGGTGGAAGAGTGGAAG+TGG + Chr1:82901638-82901657 None:intergenic 55.0%
! GGCCAAGTAGGAACTGGCTT+GGG - Chr1:82901024-82901043 MsG0180004798.01.T01:CDS 55.0%
! GGTTCAGCTTGGTGGAAGAG+TGG + Chr1:82901644-82901663 None:intergenic 55.0%
!! GTAGGAACTGGCTTGGGACT+TGG - Chr1:82901030-82901049 MsG0180004798.01.T01:CDS 55.0%
!! TGCAATGTGCTGGTTCGGCT+CGG + Chr1:82901521-82901540 None:intergenic 55.0%
CCAACAGACCGCCCAACAAG+TGG + Chr1:82901545-82901564 None:intergenic 60.0%
TAGAGAGCCCGAGGAGAGTC+AGG - Chr1:82901176-82901195 MsG0180004798.01.T01:intron 60.0%
TGAAGGCTCAGGCCTCTGAG+AGG + Chr1:82902523-82902542 None:intergenic 60.0%
! AAGGCTCAGGCCTCTGAGAG+GGG + Chr1:82902521-82902540 None:intergenic 60.0%
! CCACTTGTTGGGCGGTCTGT+TGG - Chr1:82901542-82901561 MsG0180004798.01.T01:CDS 60.0%
! GAAGGCTCAGGCCTCTGAGA+GGG + Chr1:82902522-82902541 None:intergenic 60.0%
! GCCTCTGAGAGGGGCTAACA+TGG + Chr1:82902512-82902531 None:intergenic 60.0%
! GCTCGGTGGAAGAGTGGAAG+TGG + Chr1:82901504-82901523 None:intergenic 60.0%
!! AATGTGCTGGTTCGGCTCGG+TGG + Chr1:82901518-82901537 None:intergenic 60.0%
!! GGTTCGGCTCGGTGGAAGAG+TGG + Chr1:82901510-82901529 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr1 gene 82897817 82903787 82897817 ID=MsG0180004798.01;Name=MsG0180004798.01
Chr1 mRNA 82897817 82903787 82897817 ID=MsG0180004798.01.T01;Parent=MsG0180004798.01;Name=MsG0180004798.01.T01;_AED=0.06;_eAED=0.07;_QI=0|0|0|1|0.83|0.85|7|0|1061
Chr1 exon 82903731 82903787 82903731 ID=MsG0180004798.01.T01:exon:27488;Parent=MsG0180004798.01.T01
Chr1 exon 82903318 82903554 82903318 ID=MsG0180004798.01.T01:exon:27487;Parent=MsG0180004798.01.T01
Chr1 exon 82902511 82903044 82902511 ID=MsG0180004798.01.T01:exon:27486;Parent=MsG0180004798.01.T01
Chr1 exon 82901283 82901688 82901283 ID=MsG0180004798.01.T01:exon:27485;Parent=MsG0180004798.01.T01
Chr1 exon 82900536 82901104 82900536 ID=MsG0180004798.01.T01:exon:27484;Parent=MsG0180004798.01.T01
Chr1 exon 82898138 82899313 82898138 ID=MsG0180004798.01.T01:exon:27483;Parent=MsG0180004798.01.T01
Chr1 exon 82897817 82898023 82897817 ID=MsG0180004798.01.T01:exon:27482;Parent=MsG0180004798.01.T01
Chr1 CDS 82903731 82903787 82903731 ID=MsG0180004798.01.T01:cds;Parent=MsG0180004798.01.T01
Chr1 CDS 82903318 82903554 82903318 ID=MsG0180004798.01.T01:cds;Parent=MsG0180004798.01.T01
Chr1 CDS 82902511 82903044 82902511 ID=MsG0180004798.01.T01:cds;Parent=MsG0180004798.01.T01
Chr1 CDS 82901283 82901688 82901283 ID=MsG0180004798.01.T01:cds;Parent=MsG0180004798.01.T01
Chr1 CDS 82900536 82901104 82900536 ID=MsG0180004798.01.T01:cds;Parent=MsG0180004798.01.T01
Chr1 CDS 82898138 82899313 82898138 ID=MsG0180004798.01.T01:cds;Parent=MsG0180004798.01.T01
Chr1 CDS 82897817 82898023 82897817 ID=MsG0180004798.01.T01:cds;Parent=MsG0180004798.01.T01
Gene Sequence

>MsG0180004798.01.T01

ATGAATACTGGTTTATCAATGGCATTACTTCGACCTTCATCTTTCATGATCTTGCTGGCATATGGTGCACTAATAGTCCTTGCCTCATTGACACCATGTTGGTATCTCATGGTCACACATATTGAGAAAAGTGTGAATTTGCACTCAGCAAATATTGTGTCACAATTGCAATCAGAAATTGAGTACTCAGCTGAACTATTGCAACCAATGAAATCATCATCAACAAATTTATCTACATTATTGAGCTCAACCCTTAATTCTACTAATGTCACCTTCTCTGATGTTCACACCAAGGTGGCTCCGTTATTATTTCAAGCATTGAAGACAATTCCTCACTTGACACAAATCTCATACATAGGAATGGAAGGTCTTTTTTTCACACACTACAATGATGGTGATCAAGTTCTAGCAATGTACTCTAACTCATCTAGTGGGGGTGCTTCAAACAAAACTATATACTATATCCAACCTGTGAACCATGACACTGGAATGGTTTTTGGGGAAGCCATAATATCTAACAACACTATCAATATTGATGCAAGTTGGATAAATGGAACAAATAATATTTCACATGAATTTGCATCATTGGGAACAAAGTTGAATAATGTTAGTGATCTTTTGTTCATGAATTCAGCTAGAATCAACAGAATAGGAGGGGTCTCTCTTGGATTTTCGACGAAAGCAATAACCGATTATATCACTCGCATTGTCGATCGTCAAGGGACAAAATCATATTTGGCTACCAAAGATGGAAAAGTTATTGTAAAAGGAATTCAAAATATCCGTTTGATGATTTTAATGATAGTGTTTCAATTCAAGCTGTTAATGGTGCATGTGTTAGCTGTCCCACAAAATGGATCTCTCATCTTTAATCCAAGTCATAAAGAAAAGGGATTGACACTCTTGATTGTAATGATGATGATGATATTTATTGCTATCTTGAGTTTTCTATTCTTGAATGTTGGAGTGACAAAGAGAGAAATGCATTTGTGTGCATCACTCATACAACAAAAAGAAGCCACAGAACAAGCTGAGAGAAAGAATACCAATAAGAGTCTTGCTTTTGCTACTGCTAGCCATGATCTTCGTGCTTATCTTGCAGGCCTTATTGGTTTGATTGAAATGTCCTCTAAATTAGTTGTTACTAATTCAAAATTGGACACCAATTTGAAACCAAGTTCAGAATTGGAGACCAACTTAAAACAAATGGATAATTGTGCCCAAGATTTGCTAGGACTGTTGAATTCTATACTTGACACAAGCAAGATTGAGGCAGGAAAAATGCAACTAGAGGAAGAGGAATTTGATTTATCCTCTCTCCTTGAGGATGTAGTTGATTTGTACCATCCAATGGCAATGAAGAAAGGTGTAGAAGTTGTATTGGACTCTTGTAATGGCTCAGTGATCAAACATTCACGTGTGAAAGGTGATAGGAGAAAATTGAAGCAAGTTTTGTGTAACTTGCTTAGCAATGCTGTTAAATTTACTGATGAAGGGCACATAACAGTTAGAGCATGGACTCAGAAGGCCAAATTGCAAAAATCCAAGACTAACCACAAGAGTGTTGTGAAATCTTTGTCTTGGTTGTTTAATAAGAAAGACAAAGAATGTGAAGACATAGAAGCTGTGAATTTAGCCCAACAAGATCCATGTCTTATGGATTTTGTATTTGAAGTGGATGATACAGGGAAAGGTATTCCTAAAGAGAATCACAAGTCAGTGTTTGAGAATTATGTTCAAGTTAAAGAGAATTCTGTTGGCCAAGTAGGAACTGGCTTGGGACTTGGGATTGTGCAGTCATTGGTACGTTTGATGCATGGAGACATTGGTATTGTGGACAAGGAAGTTGGCAAAAGAGGAACATGCTTCAAGTTCAATGTGCTTCTCACCTTATGTGAGAATGAGACAGTGAATTATGAGTATGGATCAACCTCAGGTGACAAAAACCAAACCCTAGAGAAAAAATTAACAATTCGTACTGCTAGTTCTGGTTCAAGCATTTGTTCTTTGAGTCCAAAACTCCATGTTAGCCCCTCTCAGAGGCCTGAGCCTTCACATGTCATTCTTTACATTACTGATGAGGAAAGAAGAAGAACTTCGCAGTTGTTCATAGAGAGCTTAGGGATTAAAGTCAAGGTTGTGAAGAGTAGAAATCATCTAATTCATACTCTCAAGAAGATCAAAAAAGAAAAGGGTGACGATATCAGTGATCAAAGTTCACCGGAGTCTTCGGAGATGAGTTCTAGGTGTACATCTTATAACTCTTCTTGTAGTAGAAGAGTTCCTTTCAAAGCTATGGATCATGGAAATGAATATCTATCTTCAATGTTCAAGAAGAAAAACAATGGAGCTGCACCAAGTTTTGTTTTGATTATCATTGATGCAAATGCAGGACCATTTTCTAAGCTTTGTAAGATTGTGTCAAACTTCAAGAAAGATCTTCTCAATCCTAGTAAAGTTGTTTGGTTGGAAAAGCCTTTTGAGAGTAGTGTTGATTACCAAGCAATTGATCAAGATGATATTGTGATATCAAAACCATTTCATGGTAGTAGATTGTTCCAAGTCATTAGGCTTCTTCCTGAGTTCGGTGGTAATTGGATAAGCAATTCTAGTAAACCAAGAAATGAACCTAGATCACAAGTACCTGCCAATGATGAAAGTGTGTGTCTAAGTGTGGAACAATGTTGGAAGGGAACACAAAAGTCCTATGTTAATCTGGGAAGAAAAGGTTCTGTTCATCAAGGTGAAATAGAAGAAAGTGGAGAATCAAGCAATCCTAAACCATTAAGTGGAAAGAAGTTTTTGGTTGTTGATGATAGTCCTATGCTGAGAAAGATTTGTATGGCTACTTTGAGATCTCTTGGTGTGACTACTATTGACCAATGTGAGAATGGTGAAGAGGCTGTGAGAACTGTTCAAGAGGGTTTAACCAAGGATTTTACTAATCCTCCTTATGATTATATCTTAATGGATTGTCAGATGCCAGTGAAGGATGGGTTTGAGGCAACAAGGGAGATAAGAGAGATGGAGAAACACTATGGTCTTCACATTTCTATCATTGCATTATCTGCTGAAATTGACAAGCTGACCACTGAGACTGGAATGGATTTCCACATTACCAAACCTATCAAGAAAGAGCATTTACTCAAAGCTATTGCGTACATAGAAAATAGTGACATAATGTAA
Protein sequence

>MsG0180004798.01.T01

MNTGLSMALLRPSSFMILLAYGALIVLASLTPCWYLMVTHIEKSVNLHSANIVSQLQSEIEYSAELLQPMKSSSTNLSTLLSSTLNSTNVTFSDVHTKVAPLLFQALKTIPHLTQISYIGMEGLFFTHYNDGDQVLAMYSNSSSGGASNKTIYYIQPVNHDTGMVFGEAIISNNTINIDASWINGTNNISHEFASLGTKLNNVSDLLFMNSARINRIGGVSLGFSTKAITDYITRIVDRQGTKSYLATKDGKVIVKGIQNIRLMILMIVFQFKLLMVHVLAVPQNGSLIFNPSHKEKGLTLLIVMMMMIFIAILSFLFLNVGVTKREMHLCASLIQQKEATEQAERKNTNKSLAFATASHDLRAYLAGLIGLIEMSSKLVVTNSKLDTNLKPSSELETNLKQMDNCAQDLLGLLNSILDTSKIEAGKMQLEEEEFDLSSLLEDVVDLYHPMAMKKGVEVVLDSCNGSVIKHSRVKGDRRKLKQVLCNLLSNAVKFTDEGHITVRAWTQKAKLQKSKTNHKSVVKSLSWLFNKKDKECEDIEAVNLAQQDPCLMDFVFEVDDTGKGIPKENHKSVFENYVQVKENSVGQVGTGLGLGIVQSLVRLMHGDIGIVDKEVGKRGTCFKFNVLLTLCENETVNYEYGSTSGDKNQTLEKKLTIRTASSGSSICSLSPKLHVSPSQRPEPSHVILYITDEERRRTSQLFIESLGIKVKVVKSRNHLIHTLKKIKKEKGDDISDQSSPESSEMSSRCTSYNSSCSRRVPFKAMDHGNEYLSSMFKKKNNGAAPSFVLIIIDANAGPFSKLCKIVSNFKKDLLNPSKVVWLEKPFESSVDYQAIDQDDIVISKPFHGSRLFQVIRLLPEFGGNWISNSSKPRNEPRSQVPANDESVCLSVEQCWKGTQKSYVNLGRKGSVHQGEIEESGESSNPKPLSGKKFLVVDDSPMLRKICMATLRSLGVTTIDQCENGEEAVRTVQEGLTKDFTNPPYDYILMDCQMPVKDGFEATREIREMEKHYGLHISIIALSAEIDKLTTETGMDFHITKPIKKEHLLKAIAYIENSDIM*