AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180005288.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180005288.01.T01 MTR_1g096430 83.792 327 5 4 13 292 1 326 0.0 546
MsG0180005288.01.T01 MTR_8g076110 39.937 318 107 9 15 284 2 283 1.68e-64 205
MsG0180005288.01.T01 MTR_5g021710 44.574 258 78 6 15 224 4 244 3.74e-63 203
MsG0180005288.01.T01 MTR_4g036030 56.410 156 23 1 13 123 1 156 4.75e-54 179
MsG0180005288.01.T01 MTR_4g101680 56.410 156 23 1 13 123 1 156 5.67e-54 180
MsG0180005288.01.T01 MTR_5g012080 52.532 158 28 1 13 123 1 158 5.70e-50 169
MsG0180005288.01.T01 MTR_8g024480 74.510 102 26 0 10 111 6 107 3.98e-49 169
MsG0180005288.01.T01 MTR_2g062730 52.597 154 27 1 16 123 7 160 4.88e-49 166
MsG0180005288.01.T01 MTR_4g035590 52.349 149 27 1 19 123 8 156 2.14e-47 162
MsG0180005288.01.T01 MTR_2g064090 63.441 93 33 1 19 111 6 97 1.69e-37 136
MsG0180005288.01.T01 MTR_5g076850 65.217 92 31 1 19 110 6 96 3.14e-36 137
MsG0180005288.01.T01 MTR_6g477900 61.957 92 34 1 19 110 6 96 9.13e-36 129
MsG0180005288.01.T01 MTR_5g014300 53.704 108 41 3 19 126 6 104 4.40e-35 129
MsG0180005288.01.T01 MTR_3g064580 54.955 111 49 1 19 129 6 115 7.38e-35 133
MsG0180005288.01.T01 MTR_4g098630 53.922 102 42 2 19 120 6 102 7.63e-35 128
MsG0180005288.01.T01 MTR_7g085220 51.000 100 46 1 19 118 8 104 3.33e-33 124
MsG0180005288.01.T01 MTR_3g435150 58.696 92 35 1 19 110 16 104 1.55e-32 122
MsG0180005288.01.T01 MTR_2g078700 56.522 92 37 1 19 110 23 111 5.49e-32 122
MsG0180005288.01.T01 MTR_3g096920 55.102 98 41 1 13 110 1 95 7.95e-32 120
MsG0180005288.01.T01 MTR_4g089135 51.923 104 42 2 12 110 3 103 8.55e-32 121
MsG0180005288.01.T01 MTR_3g096920 55.102 98 41 1 13 110 1 95 1.75e-31 120
MsG0180005288.01.T01 MTR_6g084430 36.585 205 116 5 15 217 1 193 1.88e-31 119
MsG0180005288.01.T01 MTR_3g088110 55.102 98 41 1 13 110 1 95 2.43e-31 118
MsG0180005288.01.T01 MTR_2g080010 51.485 101 46 1 10 110 6 103 2.78e-31 120
MsG0180005288.01.T01 MTR_1g008740 52.885 104 45 2 8 110 2 102 3.41e-31 119
MsG0180005288.01.T01 MTR_1g008740 52.885 104 45 2 8 110 16 116 4.51e-31 119
MsG0180005288.01.T01 MTR_4g108760 51.429 105 48 1 6 110 4 105 1.28e-30 118
MsG0180005288.01.T01 MTR_7g085260 55.435 92 38 1 19 110 17 105 1.40e-30 118
MsG0180005288.01.T01 MTR_8g094580 55.435 92 38 1 19 110 7 95 2.46e-30 115
MsG0180005288.01.T01 MTR_5g041940 52.688 93 41 1 19 111 3 92 3.86e-30 114
MsG0180005288.01.T01 MTR_6g012670 56.522 92 37 1 19 110 20 108 4.60e-30 116
MsG0180005288.01.T01 MTR_1g090720 57.447 94 39 1 17 110 40 132 5.06e-30 118
MsG0180005288.01.T01 MTR_4g081870 52.688 93 41 1 19 111 9 98 9.18e-30 114
MsG0180005288.01.T01 MTR_2157s0010 52.174 92 41 1 19 110 8 96 1.05e-29 114
MsG0180005288.01.T01 MTR_7g097090 50.515 97 45 1 14 110 5 98 1.82e-29 114
MsG0180005288.01.T01 MTR_3g116070 52.475 101 34 3 16 110 20 112 6.01e-29 113
MsG0180005288.01.T01 MTR_2g093810 53.846 91 39 1 20 110 15 102 7.20e-29 112
MsG0180005288.01.T01 MTR_3g109340 51.579 95 43 1 16 110 19 110 8.74e-29 113
MsG0180005288.01.T01 MTR_8g467490 45.378 119 58 3 8 123 3 117 8.88e-29 114
MsG0180005288.01.T01 MTR_3g109340 51.579 95 43 1 16 110 19 110 9.34e-29 113
MsG0180005288.01.T01 MTR_5g040420 43.802 121 61 3 6 123 1 117 1.02e-28 114
MsG0180005288.01.T01 MTR_2g064470 52.577 97 41 2 15 111 7 98 2.45e-28 111
MsG0180005288.01.T01 MTR_2g079990 52.174 92 41 1 19 110 16 104 3.07e-28 112
MsG0180005288.01.T01 MTR_3g070030 52.747 91 40 1 20 110 20 107 3.84e-28 111
MsG0180005288.01.T01 MTR_2g079990 52.174 92 41 1 19 110 16 104 4.43e-28 112
MsG0180005288.01.T01 MTR_6g011860 48.571 105 49 2 8 110 2 103 7.34e-28 111
MsG0180005288.01.T01 MTR_6g032770 50.000 92 43 1 19 110 18 106 7.74e-28 111
MsG0180005288.01.T01 MTR_1g069805 48.980 98 47 1 14 111 5 99 1.12e-27 108
MsG0180005288.01.T01 MTR_8g059170 51.087 92 42 1 19 110 14 102 1.55e-27 109
MsG0180005288.01.T01 MTR_7g100990 50.000 92 43 1 19 110 11 99 1.93e-27 109
MsG0180005288.01.T01 MTR_7g011130 55.056 89 37 1 22 110 22 107 7.37e-27 108
MsG0180005288.01.T01 MTR_7g005280 53.684 95 38 1 16 110 12 100 7.63e-27 105
MsG0180005288.01.T01 MTR_1g097300 55.435 92 36 2 21 110 21 109 4.00e-26 108
MsG0180005288.01.T01 MTR_8g063550 54.839 93 37 2 21 111 8 97 5.10e-26 105
MsG0180005288.01.T01 MTR_2g068880 50.000 100 47 2 13 111 15 112 6.72e-26 104
MsG0180005288.01.T01 MTR_8g063550 54.839 93 37 2 21 111 8 97 8.81e-26 106
MsG0180005288.01.T01 MTR_4g134460 47.312 93 46 1 18 110 53 142 1.10e-25 105
MsG0180005288.01.T01 MTR_8g063550 54.839 93 37 2 21 111 8 97 1.86e-25 105
MsG0180005288.01.T01 MTR_0036s0150 54.348 92 40 2 21 111 7 97 1.94e-25 106
MsG0180005288.01.T01 MTR_7g011120 53.933 89 38 1 22 110 11 96 2.02e-25 103
MsG0180005288.01.T01 MTR_3g096140 51.613 93 44 1 21 113 9 100 2.42e-25 102
MsG0180005288.01.T01 MTR_5g069030 47.619 105 54 1 19 123 25 128 2.72e-25 105
MsG0180005288.01.T01 MTR_2g068920 48.485 99 49 1 13 111 15 111 3.07e-25 102
MsG0180005288.01.T01 MTR_5g090970 47.368 95 47 1 16 110 15 106 5.30e-25 102
MsG0180005288.01.T01 MTR_3g096140 51.613 93 44 1 21 113 9 100 9.83e-25 102
MsG0180005288.01.T01 MTR_3g093050 46.667 105 55 1 19 123 22 125 2.60e-24 103
MsG0180005288.01.T01 MTR_3g093050 46.667 105 55 1 19 123 22 125 3.13e-24 102
MsG0180005288.01.T01 MTR_3g093040 44.762 105 57 1 19 123 108 211 3.33e-24 100
MsG0180005288.01.T01 MTR_1g090723 52.174 92 42 2 21 111 10 100 4.51e-24 102
MsG0180005288.01.T01 MTR_2g086880 47.778 90 45 1 21 110 20 107 4.73e-24 102
MsG0180005288.01.T01 MTR_1g090723 52.174 92 42 2 21 111 10 100 4.95e-24 102
MsG0180005288.01.T01 MTR_1g090723 52.174 92 42 2 21 111 10 100 5.01e-24 102
MsG0180005288.01.T01 MTR_2g086880 47.778 90 45 1 21 110 20 107 5.50e-24 101
MsG0180005288.01.T01 MTR_8g093580 52.688 93 39 2 21 111 8 97 1.68e-23 100
MsG0180005288.01.T01 MTR_5g090970 47.368 95 46 2 16 110 15 105 2.04e-23 97.8
MsG0180005288.01.T01 MTR_4g075980 46.465 99 50 1 12 110 8 103 2.87e-22 94.7
MsG0180005288.01.T01 MTR_4g052620 46.316 95 49 2 15 107 1 95 2.20e-21 91.3
MsG0180005288.01.T01 MTR_8g023840 49.462 93 45 2 19 110 11 102 3.49e-21 92.8
MsG0180005288.01.T01 MTR_8g099750 46.739 92 44 1 19 110 14 100 4.03e-20 87.4
MsG0180005288.01.T01 MTR_3g098810 44.944 89 44 1 19 107 14 97 6.94e-20 85.1
MsG0180005288.01.T01 MTR_3g098810 44.944 89 44 1 19 107 14 97 2.04e-19 85.5
MsG0180005288.01.T01 MTR_8g023900 41.667 96 54 2 15 109 8 102 1.26e-18 85.9
MsG0180005288.01.T01 MTR_8g023900 42.202 109 56 3 8 110 177 284 7.23e-16 77.8
MsG0180005288.01.T01 MTR_2g086690 44.681 94 43 4 20 107 5 95 7.09e-18 81.6
MsG0180005288.01.T01 MTR_3g070040 44.318 88 43 1 23 110 12 93 2.75e-17 81.3
MsG0180005288.01.T01 MTR_4g094302 40.217 92 44 2 19 110 11 91 4.05e-17 77.4
MsG0180005288.01.T01 MTR_8g023860 45.161 93 49 2 19 110 12 103 5.28e-17 81.3
MsG0180005288.01.T01 MTR_4g094302 40.217 92 44 2 19 110 11 91 1.42e-16 76.6
MsG0180005288.01.T01 MTR_8g023930 42.553 94 52 2 19 111 24 116 2.18e-16 79.3
MsG0180005288.01.T01 MTR_3g096140 46.835 79 41 1 35 113 2 79 2.21e-16 78.6
MsG0180005288.01.T01 MTR_8g023880 36.283 113 56 4 13 110 1 112 3.72e-13 68.6
MsG0180005288.01.T01 MTR_7g105170 35.870 92 56 2 19 107 4 95 2.62e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180005288.01.T01 AT1G71930 45.051 293 94 6 15 261 5 276 1.33e-76 237
MsG0180005288.01.T01 AT1G71930 45.051 293 94 6 15 261 5 276 1.33e-76 237
MsG0180005288.01.T01 AT5G66300 40.397 302 107 9 14 264 7 286 6.15e-61 196
MsG0180005288.01.T01 AT4G36160 39.628 323 101 9 12 261 3 304 6.94e-61 198
MsG0180005288.01.T01 AT4G36160 39.628 323 101 9 12 261 3 304 6.94e-61 198
MsG0180005288.01.T01 AT4G36160 39.628 323 101 9 12 261 7 308 7.14e-61 198
MsG0180005288.01.T01 AT2G18060 44.355 248 77 6 15 215 4 237 1.70e-60 197
MsG0180005288.01.T01 AT2G18060 44.355 248 77 6 15 215 4 237 1.70e-60 197
MsG0180005288.01.T01 AT1G12260 35.362 345 119 9 13 261 1 337 2.88e-53 179
MsG0180005288.01.T01 AT1G12260 48.913 184 31 3 13 139 1 178 3.13e-52 174
MsG0180005288.01.T01 AT2G46770 76.238 101 24 0 10 110 7 107 3.21e-51 172
MsG0180005288.01.T01 AT1G62700 40.226 266 93 5 13 215 1 263 1.00e-50 172
MsG0180005288.01.T01 AT1G62700 40.226 266 93 5 13 215 1 263 1.00e-50 172
MsG0180005288.01.T01 AT1G32770 68.750 112 30 1 12 123 9 115 1.82e-50 171
MsG0180005288.01.T01 AT3G61910 72.000 100 28 0 12 111 4 103 2.44e-48 164
MsG0180005288.01.T01 AT1G79580 53.333 150 25 1 19 123 17 166 1.83e-47 163
MsG0180005288.01.T01 AT1G79580 53.333 150 25 1 19 123 17 166 1.83e-47 163
MsG0180005288.01.T01 AT1G79580 53.333 150 25 1 19 123 17 166 1.83e-47 163
MsG0180005288.01.T01 AT1G79580 53.333 150 25 1 19 123 17 166 1.83e-47 163
MsG0180005288.01.T01 AT1G79580 53.333 150 25 1 19 123 17 166 1.83e-47 163
MsG0180005288.01.T01 AT1G33280 53.020 149 26 1 19 123 8 156 2.19e-47 161
MsG0180005288.01.T01 AT5G62380 36.721 305 120 10 15 261 1 290 1.03e-46 160
MsG0180005288.01.T01 AT5G62380 36.721 305 120 10 15 261 1 290 1.03e-46 160
MsG0180005288.01.T01 AT4G10350 50.658 152 28 1 19 123 9 160 7.29e-46 158
MsG0180005288.01.T01 AT1G54330 62.105 95 35 1 19 113 6 99 2.98e-37 134
MsG0180005288.01.T01 AT3G03200 65.217 92 31 1 19 110 6 96 4.49e-37 137
MsG0180005288.01.T01 AT4G17980 54.808 104 42 2 17 120 4 102 9.79e-36 129
MsG0180005288.01.T01 AT3G17730 61.957 92 34 1 19 110 6 96 1.03e-35 129
MsG0180005288.01.T01 AT4G17980 54.808 104 42 2 17 120 4 102 1.82e-35 129
MsG0180005288.01.T01 AT5G46590 58.511 94 38 1 17 110 4 96 2.75e-35 129
MsG0180005288.01.T01 AT5G46590 58.511 94 38 1 17 110 4 96 3.61e-35 129
MsG0180005288.01.T01 AT5G17260 60.870 92 35 1 19 110 6 96 9.04e-35 131
MsG0180005288.01.T01 AT3G18400 56.250 96 39 1 15 110 1 93 1.56e-34 127
MsG0180005288.01.T01 AT1G65910 61.957 92 34 1 19 110 6 96 6.69e-34 130
MsG0180005288.01.T01 AT3G04070 53.535 99 43 1 12 110 3 98 2.54e-33 125
MsG0180005288.01.T01 AT3G04070 53.535 99 43 1 12 110 3 98 3.17e-33 125
MsG0180005288.01.T01 AT5G07680 57.609 92 36 1 19 110 3 91 5.68e-32 121
MsG0180005288.01.T01 AT3G15170 55.789 95 39 1 16 110 17 108 5.70e-32 120
MsG0180005288.01.T01 AT5G07680 55.670 97 40 1 14 110 12 105 7.00e-32 121
MsG0180005288.01.T01 AT2G24430 55.789 95 39 1 16 110 13 104 1.39e-31 120
MsG0180005288.01.T01 AT2G24430 55.789 95 39 1 16 110 13 104 1.39e-31 120
MsG0180005288.01.T01 AT1G32510 50.980 102 45 2 17 118 4 100 1.55e-31 119
MsG0180005288.01.T01 AT5G63790 54.082 98 42 1 13 110 54 148 2.49e-31 119
MsG0180005288.01.T01 AT5G63790 54.082 98 42 1 13 110 44 138 2.74e-31 119
MsG0180005288.01.T01 AT1G61110 53.261 92 40 1 19 110 16 104 3.09e-31 119
MsG0180005288.01.T01 AT5G39610 58.696 92 35 1 19 110 20 108 3.37e-31 118
MsG0180005288.01.T01 AT5G53950 58.696 92 35 1 19 110 17 105 3.39e-31 120
MsG0180005288.01.T01 AT3G29035 52.778 108 48 1 3 110 8 112 4.81e-31 118
MsG0180005288.01.T01 AT1G69490 52.083 96 43 1 16 111 6 98 1.01e-30 116
MsG0180005288.01.T01 AT4G28530 45.926 135 44 4 14 123 5 135 1.05e-30 117
MsG0180005288.01.T01 AT1G76420 51.429 105 48 1 6 110 9 110 2.38e-30 117
MsG0180005288.01.T01 AT5G61430 56.522 92 37 1 19 110 16 104 2.68e-30 117
MsG0180005288.01.T01 AT5G08790 54.082 98 42 1 13 110 1 95 4.56e-30 115
MsG0180005288.01.T01 AT1G77450 57.143 91 36 1 20 110 11 98 4.92e-30 114
MsG0180005288.01.T01 AT3G10480 57.447 94 39 1 17 110 25 117 9.83e-30 117
MsG0180005288.01.T01 AT3G10480 57.447 94 39 1 17 110 25 117 9.94e-30 117
MsG0180005288.01.T01 AT1G01720 54.348 92 39 1 19 110 7 95 1.11e-29 114
MsG0180005288.01.T01 AT3G10490 47.788 113 58 1 11 123 19 130 1.25e-29 113
MsG0180005288.01.T01 AT3G12977 53.608 97 42 1 15 111 14 107 4.45e-29 112
MsG0180005288.01.T01 AT5G18270 53.261 92 40 1 19 110 21 109 5.07e-29 113
MsG0180005288.01.T01 AT3G10490 47.788 113 58 1 11 123 19 130 5.36e-29 115
MsG0180005288.01.T01 AT4G27410 52.174 92 41 1 19 110 14 102 6.60e-29 112
MsG0180005288.01.T01 AT5G18270 52.174 92 41 1 19 110 21 109 1.42e-28 112
MsG0180005288.01.T01 AT2G43000 48.544 103 50 1 21 123 20 119 1.43e-28 111
MsG0180005288.01.T01 AT3G04060 52.174 92 41 1 19 110 20 108 1.68e-28 112
MsG0180005288.01.T01 AT5G04410 54.255 94 42 1 17 110 7 99 7.69e-28 113
MsG0180005288.01.T01 AT1G52880 53.409 88 38 1 23 110 21 105 8.45e-28 110
MsG0180005288.01.T01 AT3G15510 54.545 88 37 1 23 110 21 105 1.05e-27 110
MsG0180005288.01.T01 AT5G39820 49.474 95 45 1 16 110 17 108 1.27e-27 110
MsG0180005288.01.T01 AT3G10500 54.255 94 42 1 17 110 7 99 1.42e-27 112
MsG0180005288.01.T01 AT5G64060 54.444 90 40 1 21 110 8 96 1.93e-27 109
MsG0180005288.01.T01 AT1G52890 51.087 92 42 1 19 110 14 102 2.08e-27 108
MsG0180005288.01.T01 AT1G56010 30.859 256 102 6 2 187 3 253 2.91e-27 108
MsG0180005288.01.T01 AT1G26870 45.536 112 54 3 15 123 12 119 4.70e-27 109
MsG0180005288.01.T01 AT3G15500 50.538 93 43 1 19 111 14 103 4.83e-27 107
MsG0180005288.01.T01 AT2G33480 52.174 92 38 1 19 110 15 100 8.95e-27 106
MsG0180005288.01.T01 AT2G33480 52.174 92 38 1 19 110 15 100 1.03e-26 105
MsG0180005288.01.T01 AT4G28530 47.826 115 39 3 14 111 5 115 1.16e-26 107
MsG0180005288.01.T01 AT5G24590 52.475 101 43 2 14 110 4 103 3.72e-26 107
MsG0180005288.01.T01 AT1G33060 42.857 119 66 2 5 123 11 127 3.87e-26 108
MsG0180005288.01.T01 AT1G33060 42.857 119 66 2 5 123 11 127 4.16e-26 108
MsG0180005288.01.T01 AT2G27300 47.368 95 48 1 17 111 12 104 6.19e-26 105
MsG0180005288.01.T01 AT2G02450 46.237 93 47 1 18 110 50 139 8.33e-26 105
MsG0180005288.01.T01 AT3G49530 50.000 98 47 2 13 110 8 103 8.54e-26 105
MsG0180005288.01.T01 AT2G02450 46.237 93 47 1 18 110 50 139 9.09e-26 105
MsG0180005288.01.T01 AT4G27410 47.170 106 42 3 19 110 14 119 1.25e-25 103
MsG0180005288.01.T01 AT3G49530 50.000 98 47 2 13 110 8 103 1.30e-25 106
MsG0180005288.01.T01 AT3G10480 42.742 124 39 1 19 110 27 150 1.75e-25 106
MsG0180005288.01.T01 AT3G44290 45.556 90 47 1 21 110 16 103 3.41e-25 100
MsG0180005288.01.T01 AT5G04395 46.154 104 46 2 16 109 25 128 1.17e-24 98.6
MsG0180005288.01.T01 AT4G35580 48.515 101 50 2 11 111 2 100 1.47e-24 103
MsG0180005288.01.T01 AT3G44290 45.556 90 47 1 21 110 16 103 1.79e-24 101
MsG0180005288.01.T01 AT4G35580 48.515 101 50 2 11 111 2 100 1.89e-24 103
MsG0180005288.01.T01 AT4G35580 48.515 101 50 2 11 111 2 100 1.91e-24 103
MsG0180005288.01.T01 AT5G22290 42.718 103 56 2 9 110 10 110 1.94e-24 101
MsG0180005288.01.T01 AT5G09330 48.000 100 47 2 21 120 8 102 3.81e-24 102
MsG0180005288.01.T01 AT5G09330 48.000 100 47 2 21 120 8 102 3.81e-24 102
MsG0180005288.01.T01 AT5G09330 48.000 100 47 2 21 120 8 102 3.81e-24 102
MsG0180005288.01.T01 AT5G09330 48.000 100 47 2 21 120 8 102 3.81e-24 102
MsG0180005288.01.T01 AT5G09330 48.000 100 47 2 21 120 8 102 3.81e-24 102
MsG0180005288.01.T01 AT5G13180 50.000 92 40 1 19 110 14 99 4.11e-24 98.6
MsG0180005288.01.T01 AT1G34180 42.991 107 60 1 7 113 4 109 8.46e-24 101
MsG0180005288.01.T01 AT1G34180 42.991 107 60 1 7 113 4 109 8.84e-24 100
MsG0180005288.01.T01 AT1G34190 48.421 95 44 2 21 113 18 109 3.22e-23 99.8
MsG0180005288.01.T01 AT1G34180 41.322 121 54 3 7 113 4 121 9.98e-23 98.6
MsG0180005288.01.T01 AT1G34180 41.322 121 54 3 7 113 4 121 1.03e-22 97.8
MsG0180005288.01.T01 AT3G12910 47.059 102 46 4 12 110 14 110 1.09e-22 95.9
MsG0180005288.01.T01 AT2G17040 42.222 90 49 1 21 110 8 94 9.79e-21 90.1
MsG0180005288.01.T01 AT4G10350 42.991 107 14 1 64 123 7 113 1.24e-20 90.1
MsG0180005288.01.T01 AT1G32870 44.037 109 55 3 6 111 30 135 7.21e-19 87.0
MsG0180005288.01.T01 AT1G32870 47.312 93 46 2 19 111 10 99 4.29e-18 84.7
MsG0180005288.01.T01 AT1G32870 47.312 93 46 2 19 111 10 99 4.41e-18 84.7
MsG0180005288.01.T01 AT5G64530 41.304 92 43 3 19 110 3 83 2.56e-16 75.1
MsG0180005288.01.T01 AT5G64530 41.304 92 43 3 19 110 3 83 8.62e-16 74.3
MsG0180005288.01.T01 AT1G02250 42.857 91 47 3 20 107 4 92 3.68e-15 75.5
MsG0180005288.01.T01 AT1G02230 42.857 91 49 3 20 108 4 93 1.53e-14 73.6
MsG0180005288.01.T01 AT5G22380 38.384 99 52 3 15 107 1 96 2.89e-13 68.6
MsG0180005288.01.T01 AT3G12977 74.286 35 9 0 77 111 20 54 3.31e-12 65.1
MsG0180005288.01.T01 AT5G61430 65.116 43 12 1 68 110 2 41 3.54e-12 65.9
MsG0180005288.01.T01 AT1G56010 26.667 165 53 2 77 173 8 172 7.53e-11 61.6

Find 55 sgRNAs with CRISPR-Local

Find 162 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAGCCACTGCTGCTGGATTT+TGG 0.210425 1:+89711017 MsG0180005288.01.T01:CDS
TGTCCATAACAAGAGTATTT+TGG 0.229615 1:-89712000 None:intergenic
AATCAAGCTAATCATATCTT+AGG 0.311406 1:+89712294 MsG0180005288.01.T01:CDS
TAGGATATTTCTTATCTTTG+TGG 0.324009 1:-89710976 None:intergenic
TTGATTGCAAAACTTGTTGT+TGG 0.357050 1:-89712058 None:intergenic
GAGATCATCATCAATGGATA+TGG 0.360587 1:+89710591 MsG0180005288.01.T01:CDS
AACTGTTGATCATTGCTAAA+GGG 0.376851 1:-89711968 None:intergenic
AAACCAAAATACTCTTGTTA+TGG 0.379475 1:+89711997 MsG0180005288.01.T01:CDS
AAAATATCTGTAATTGATAA+AGG 0.402136 1:-89711887 None:intergenic
CTATTAGTTCTTGTTCCTGT+AGG 0.412771 1:-89710995 None:intergenic
TTGTAGGGTATTACCTCAAC+AGG 0.423700 1:+89710662 MsG0180005288.01.T01:CDS
ACAATGGACAAGTAATTGAT+TGG 0.431733 1:+89712152 MsG0180005288.01.T01:CDS
ACTAATAGAGCCACTGCTGC+TGG 0.441800 1:+89711010 MsG0180005288.01.T01:CDS
AAGAAGGATGGGTTGTGTGC+AGG 0.445621 1:+89711753 MsG0180005288.01.T01:CDS
AAAAGCCAAGTCCAAGTCAT+AGG 0.450680 1:+89711783 MsG0180005288.01.T01:CDS
AGTAATTGATTGGAAAAGCT+TGG 0.452396 1:+89712162 MsG0180005288.01.T01:CDS
CCAACAGAAGAAGAACTTGT+AGG 0.454094 1:+89710646 MsG0180005288.01.T01:CDS
AAGAATATTGCAGTGAAGAA+AGG 0.454802 1:+89712113 MsG0180005288.01.T01:CDS
CCTACAAGTTCTTCTTCTGT+TGG 0.464154 1:-89710646 None:intergenic
TCATAACCTGGCCTATGACT+TGG 0.481317 1:-89711794 None:intergenic
AAACTGTTGATCATTGCTAA+AGG 0.486770 1:-89711969 None:intergenic
TATTAATTACTGCAGGAAGA+AGG 0.489259 1:+89711737 MsG0180005288.01.T01:intron
AGAAGGATGGGTTGTGTGCA+GGG 0.492807 1:+89711754 MsG0180005288.01.T01:CDS
CTATACCATGGTTCATAACC+TGG 0.495957 1:-89711806 None:intergenic
ATGGAATCATGTGTACCTCC+AGG 0.502938 1:+89710610 MsG0180005288.01.T01:CDS
ATTGAACCATGGGACATTCA+AGG 0.504836 1:+89710742 MsG0180005288.01.T01:CDS
AAACTTGTACCTTCAGCTGC+AGG 0.517860 1:-89711938 None:intergenic
AATGCAGATAGATGCAAGCT+AGG 0.521793 1:+89710920 MsG0180005288.01.T01:intron
CCTGGCCTATGACTTGGACT+TGG 0.526558 1:-89711788 None:intergenic
CAACAGAAGAAGAACTTGTA+GGG 0.533130 1:+89710647 MsG0180005288.01.T01:CDS
GTGAGTTAATCTTCCTGTTG+AGG 0.533745 1:-89710675 None:intergenic
TGTAGCTCATGTTGACTATG+AGG 0.535154 1:-89712262 None:intergenic
TGACTATGAGGTATCATCAA+TGG 0.537374 1:-89712250 None:intergenic
AATTACTGCAGGAAGAAGGA+TGG 0.543175 1:+89711741 MsG0180005288.01.T01:intron
TCAGGAGAGATCATCATCAA+TGG 0.553807 1:+89710585 MsG0180005288.01.T01:intron
AAAGATAAGAAATATCCTAC+AGG 0.562663 1:+89710980 MsG0180005288.01.T01:CDS
ATTACTGCAGGAAGAAGGAT+GGG 0.564101 1:+89711742 MsG0180005288.01.T01:intron
CTTCAAAATCCTGCAGCTGA+AGG 0.566846 1:+89711929 MsG0180005288.01.T01:CDS
CCAAGTCCAAGTCATAGGCC+AGG 0.570685 1:+89711788 MsG0180005288.01.T01:CDS
ATCTCTACAAAATTGAACCA+TGG 0.574175 1:+89710731 MsG0180005288.01.T01:CDS
TCTCTACAAAATTGAACCAT+GGG 0.577975 1:+89710732 MsG0180005288.01.T01:CDS
AGCATTAATAATAATAACAA+TGG 0.580251 1:+89712136 MsG0180005288.01.T01:CDS
TGATCTAGATGTTATTGTTG+AGG 0.597687 1:+89710705 MsG0180005288.01.T01:CDS
TTTCCAAAATCCAGCAGCAG+TGG 0.602768 1:-89711020 None:intergenic
GTTGGATGAAATCTAAACCC+TGG 0.604289 1:-89710628 None:intergenic
AATGTACCTTGAATGTCCCA+TGG 0.604436 1:-89710748 None:intergenic
TGTTGTTGATTACTATACCA+TGG 0.613974 1:-89711818 None:intergenic
TGGAATCATGTGTACCTCCA+GGG 0.620854 1:+89710611 MsG0180005288.01.T01:CDS
ACTGTTGATCATTGCTAAAG+GGG 0.622654 1:-89711967 None:intergenic
AAAGAAAATACTCATCACAA+TGG 0.626769 1:+89712079 MsG0180005288.01.T01:CDS
GATATGAGCAACAGAATGAG+TGG 0.640331 1:+89710942 MsG0180005288.01.T01:CDS
ATAGGCCAGGTTATGAACCA+TGG 0.676021 1:+89711801 MsG0180005288.01.T01:CDS
GGATGAAATCTAAACCCTGG+AGG 0.694839 1:-89710625 None:intergenic
GTTGTTGGACTATCTAACTG+TGG 0.697760 1:-89712043 None:intergenic
TCATCTGATCTGAAATACTG+TGG 0.737110 1:-89711842 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATAAAATTAGAATAGAA+AGG - Chr1:89711304-89711323 None:intergenic 10.0%
!! AAAATGATTTATTTATCAAA+TGG - Chr1:89709200-89709219 None:intergenic 10.0%
!!! ATTTGATAAATAAATCATTT+TGG + Chr1:89709199-89709218 MsG0180005288.01.T01:intron 10.0%
!!! TAATTTACATATTTCTTTTT+TGG - Chr1:89710499-89710518 None:intergenic 10.0%
!!! TTTATTTTATCTTTTGTTAT+AGG + Chr1:89711584-89711603 MsG0180005288.01.T01:intron 10.0%
!! AAAATATCTGTAATTGATAA+AGG - Chr1:89711890-89711909 None:intergenic 15.0%
!! AAGGATATATATACTATATA+TGG - Chr1:89709078-89709097 None:intergenic 15.0%
!! AGCATTAATAATAATAACAA+TGG + Chr1:89712136-89712155 MsG0180005288.01.T01:CDS 15.0%
!! CTTGTTCTATATATTATTAA+TGG + Chr1:89709900-89709919 MsG0180005288.01.T01:intron 15.0%
!! TTCTATATATTATTAATGGT+GGG + Chr1:89709904-89709923 MsG0180005288.01.T01:intron 15.0%
!!! CTTAGTTTTCTAAATAAAAA+TGG + Chr1:89709338-89709357 MsG0180005288.01.T01:intron 15.0%
!!! TAAGTAAAAAACAACATTTT+AGG - Chr1:89710269-89710288 None:intergenic 15.0%
!!! TTTTTGTTTATAATAGTGAT+CGG - Chr1:89710170-89710189 None:intergenic 15.0%
!! AAATGATTCATTATTTATGC+AGG - Chr1:89710552-89710571 None:intergenic 20.0%
!! AACTAACAAACAAGATATAT+AGG - Chr1:89709875-89709894 None:intergenic 20.0%
!! GTTCTATATATTATTAATGG+TGG + Chr1:89709903-89709922 MsG0180005288.01.T01:intron 20.0%
!! TAAACAAAAAACAACATTCT+AGG + Chr1:89710180-89710199 MsG0180005288.01.T01:intron 20.0%
!! TATTACTGAAATCAGTATTA+TGG + Chr1:89709488-89709507 MsG0180005288.01.T01:intron 20.0%
!! TATTTACTATTTACAGTCAA+AGG - Chr1:89711708-89711727 None:intergenic 20.0%
!! TTAGAAAACCAAAACATATA+TGG + Chr1:89710516-89710535 MsG0180005288.01.T01:intron 20.0%
!! TTATATCCTTATCAACATTA+TGG + Chr1:89710833-89710852 MsG0180005288.01.T01:intron 20.0%
!! TTGAAATTATTAATTACTGC+AGG + Chr1:89711730-89711749 MsG0180005288.01.T01:intron 20.0%
!! TTGAGATGATAATATAATTG+AGG - Chr1:89711669-89711688 None:intergenic 20.0%
!!! AAGAAAAGTTGTGTTTTTAT+GGG - Chr1:89709830-89709849 None:intergenic 20.0%
!!! ATAAAAACACAACTTTTCTT+AGG + Chr1:89709830-89709849 MsG0180005288.01.T01:intron 20.0%
!!! ATGTTTTGGTTTTTATCATT+TGG + Chr1:89709373-89709392 MsG0180005288.01.T01:intron 20.0%
!!! CAATTTTACCATATATGTTT+TGG - Chr1:89710527-89710546 None:intergenic 20.0%
!!! GATAAATAAATCATTTTGGT+TGG + Chr1:89709203-89709222 MsG0180005288.01.T01:intron 20.0%
!!! TAAAAACACAACTTTTCTTA+GGG + Chr1:89709831-89709850 MsG0180005288.01.T01:intron 20.0%
!!! TAAGAAAAGTTGTGTTTTTA+TGG - Chr1:89709831-89709850 None:intergenic 20.0%
!!! TAATATAATTGAGGTTTGTT+TGG - Chr1:89711660-89711679 None:intergenic 20.0%
!!! TCATAATCAAAATTTGACTT+TGG + Chr1:89710805-89710824 MsG0180005288.01.T01:intron 20.0%
!!! TGTATTTTTTTTTACTGTTG+AGG - Chr1:89709412-89709431 None:intergenic 20.0%
!!! TTTTTACTTATAATAGTGAC+CGG + Chr1:89710279-89710298 MsG0180005288.01.T01:intron 20.0%
!!! TTTTTTAGAGAGAAATTCTT+AGG + Chr1:89710054-89710073 MsG0180005288.01.T01:intron 20.0%
! AAAACAGAATAATAGGAATG+AGG + Chr1:89711074-89711093 MsG0180005288.01.T01:intron 25.0%
! AAACCAAAATACTCTTGTTA+TGG + Chr1:89711997-89712016 MsG0180005288.01.T01:CDS 25.0%
! AAAGAAAATACTCATCACAA+TGG + Chr1:89712079-89712098 MsG0180005288.01.T01:CDS 25.0%
! AAAGATAAGAAATATCCTAC+AGG + Chr1:89710980-89710999 MsG0180005288.01.T01:CDS 25.0%
! AAATAAACAAATACACTCTC+CGG - Chr1:89710301-89710320 None:intergenic 25.0%
! AACCAAAAAACTAATAGACA+TGG - Chr1:89709272-89709291 None:intergenic 25.0%
! AAGTAATTGAACAGAAAAGT+TGG - Chr1:89709777-89709796 None:intergenic 25.0%
! ACTTCCAAAAACAGAATAAT+AGG + Chr1:89711067-89711086 MsG0180005288.01.T01:intron 25.0%
! AGTATATATATCCTTAGTGT+GGG + Chr1:89709083-89709102 MsG0180005288.01.T01:intron 25.0%
! CATCATCATCATCATTATTA+TGG + Chr1:89709999-89710018 MsG0180005288.01.T01:intron 25.0%
! CATTCATTAAATGATGTATG+TGG - Chr1:89710224-89710205 None:intergenic 25.0%
! TAAATAAAAATGGAGTCTGA+TGG + Chr1:89709348-89709367 MsG0180005288.01.T01:intron 25.0%
! TAGGATATTTCTTATCTTTG+TGG - Chr1:89710979-89710998 None:intergenic 25.0%
! TAGTATATATATCCTTAGTG+TGG + Chr1:89709082-89709101 MsG0180005288.01.T01:intron 25.0%
!! CATTCCTATTATTCTGTTTT+TGG - Chr1:89711074-89711093 None:intergenic 25.0%
!! GTTTTCACACTAATTTTCAA+AGG - Chr1:89709570-89709589 None:intergenic 25.0%
!!! ATCCATGTCTATTAGTTTTT+TGG + Chr1:89709267-89709286 MsG0180005288.01.T01:intron 25.0%
!!! CATTTTGTTTTGTTTCTTTC+AGG + Chr1:89710567-89710586 MsG0180005288.01.T01:intron 25.0%
!!! TGATGATGCAACTTTAATTT+TGG - Chr1:89709984-89710003 None:intergenic 25.0%
!!! TTCTCTTTTTTAGAACTATG+AGG + Chr1:89710390-89710409 MsG0180005288.01.T01:intron 25.0%
AAAAATTACACTAGCTAGCT+AGG - Chr1:89710039-89710058 None:intergenic 30.0%
AAAATTACACTAGCTAGCTA+GGG - Chr1:89710038-89710057 None:intergenic 30.0%
AAACTGTTGATCATTGCTAA+AGG - Chr1:89711972-89711991 None:intergenic 30.0%
AACTGTTGATCATTGCTAAA+GGG - Chr1:89711971-89711990 None:intergenic 30.0%
AAGAATATTGCAGTGAAGAA+AGG + Chr1:89712113-89712132 MsG0180005288.01.T01:CDS 30.0%
AATAATAGTTACCCACACTA+AGG - Chr1:89709097-89709116 None:intergenic 30.0%
ACAATGGACAAGTAATTGAT+TGG + Chr1:89712152-89712171 MsG0180005288.01.T01:CDS 30.0%
ACTGAAATCAGTATTATGGA+TGG + Chr1:89709492-89709511 MsG0180005288.01.T01:intron 30.0%
AGTAATTGATTGGAAAAGCT+TGG + Chr1:89712162-89712181 MsG0180005288.01.T01:CDS 30.0%
ATCTCTACAAAATTGAACCA+TGG + Chr1:89710731-89710750 MsG0180005288.01.T01:CDS 30.0%
ATGCTGCCTTAATTTACATT+AGG + Chr1:89710467-89710486 MsG0180005288.01.T01:intron 30.0%
TAAACCAGAACCAAGAAATT+TGG - Chr1:89710361-89710380 None:intergenic 30.0%
TACTTGTGCATGTTTGAAAA+TGG - Chr1:89711455-89711474 None:intergenic 30.0%
TATTAATTACTGCAGGAAGA+AGG + Chr1:89711737-89711756 MsG0180005288.01.T01:intron 30.0%
TCTCTACAAAATTGAACCAT+GGG + Chr1:89710732-89710751 MsG0180005288.01.T01:CDS 30.0%
TGATCTAGATGTTATTGTTG+AGG + Chr1:89710705-89710724 MsG0180005288.01.T01:CDS 30.0%
TGTGACCAAAGAAAATTTCT+TGG - Chr1:89710090-89710109 None:intergenic 30.0%
TGTTTATAATAGTGATCGGA+GGG - Chr1:89710166-89710185 None:intergenic 30.0%
TTGTTTATAATAGTGATCGG+AGG - Chr1:89710167-89710186 None:intergenic 30.0%
TTTAGAGAGAAATTCTTAGG+TGG + Chr1:89710057-89710076 MsG0180005288.01.T01:intron 30.0%
TTTATTTGTGAAGAGAGAGA+AGG + Chr1:89710314-89710333 MsG0180005288.01.T01:intron 30.0%
! AAGACACTTGTCTTTTACAA+GGG + Chr1:89711097-89711116 MsG0180005288.01.T01:intron 30.0%
! AATCAGTTTTCCTTCCATTT+GGG - Chr1:89711129-89711148 None:intergenic 30.0%
! TGTTGTTGATTACTATACCA+TGG - Chr1:89711821-89711840 None:intergenic 30.0%
!! TTGATTGCAAAACTTGTTGT+TGG - Chr1:89712061-89712080 None:intergenic 30.0%
!!! ACATATTTCTTTTTTGGCCA+AGG - Chr1:89710493-89710512 None:intergenic 30.0%
!!! TGTCCATAACAAGAGTATTT+TGG - Chr1:89712003-89712022 None:intergenic 30.0%
AACTTATGCTTATGAGTGAG+TGG + Chr1:89709590-89709609 MsG0180005288.01.T01:intron 35.0%
ACTGTTGATCATTGCTAAAG+GGG - Chr1:89711970-89711989 None:intergenic 35.0%
AGACATCAAACTTCTGAACA+TGG + Chr1:89711166-89711185 MsG0180005288.01.T01:intron 35.0%
AGCATGTGCAATTCCAAAAT+TGG - Chr1:89709946-89709965 None:intergenic 35.0%
CAAACCAAATTTCTTGGTTC+TGG + Chr1:89710354-89710373 MsG0180005288.01.T01:intron 35.0%
CAAAGAAAATTTCTTGGTCC+TGG - Chr1:89710084-89710103 None:intergenic 35.0%
CAAATGGAAGGAAAACTGAT+TGG + Chr1:89711128-89711147 MsG0180005288.01.T01:intron 35.0%
CAACAGAAGAAGAACTTGTA+GGG + Chr1:89710647-89710666 MsG0180005288.01.T01:CDS 35.0%
CAGAACCAAGAAATTTGGTT+TGG - Chr1:89710356-89710375 None:intergenic 35.0%
CATGCTCCATAATGTTGATA+AGG - Chr1:89710842-89710861 None:intergenic 35.0%
CCAAGGCCTAATGTAAATTA+AGG - Chr1:89710476-89710495 None:intergenic 35.0%
CCTTAATTTACATTAGGCCT+TGG + Chr1:89710473-89710492 MsG0180005288.01.T01:intron 35.0%
GAGATCATCATCAATGGATA+TGG + Chr1:89710591-89710610 MsG0180005288.01.T01:CDS 35.0%
TGTGACCAAACCAAATTTCT+TGG + Chr1:89710348-89710367 MsG0180005288.01.T01:intron 35.0%
TTCTCAGATGAGTCTGTTAA+AGG + Chr1:89709141-89709160 MsG0180005288.01.T01:intron 35.0%
TTGTGCATGTTTGAAAATGG+AGG - Chr1:89711452-89711471 None:intergenic 35.0%
! ATCAGTTTTCCTTCCATTTG+GGG - Chr1:89711128-89711147 None:intergenic 35.0%
! ATGCTAAAATAACTTGCCTG+TGG - Chr1:89711196-89711215 None:intergenic 35.0%
! CAATCAGTTTTCCTTCCATT+TGG - Chr1:89711130-89711149 None:intergenic 35.0%
! CAGGACCAAGAAATTTTCTT+TGG + Chr1:89710082-89710101 MsG0180005288.01.T01:intron 35.0%
! CTATTAGTTCTTGTTCCTGT+AGG - Chr1:89710998-89711017 None:intergenic 35.0%
! GAAGACACTTGTCTTTTACA+AGG + Chr1:89711096-89711115 MsG0180005288.01.T01:intron 35.0%
! GACAGCAAAGTCAATCTTTT+CGG + Chr1:89709751-89709770 MsG0180005288.01.T01:intron 35.0%
! TCATCTGATCTGAAATACTG+TGG - Chr1:89711845-89711864 None:intergenic 35.0%
! TGACTATGAGGTATCATCAA+TGG - Chr1:89712253-89712272 None:intergenic 35.0%
!! ATTTTGGAAAGCTACTGGAA+GGG + Chr1:89711033-89711052 MsG0180005288.01.T01:CDS 35.0%
AAAAGCCAAGTCCAAGTCAT+AGG + Chr1:89711783-89711802 MsG0180005288.01.T01:CDS 40.0%
AACAGACTCATCTGAGAAGA+AGG - Chr1:89709139-89709158 None:intergenic 40.0%
AATGCAGATAGATGCAAGCT+AGG + Chr1:89710920-89710939 MsG0180005288.01.T01:intron 40.0%
AATGTACCTTGAATGTCCCA+TGG - Chr1:89710751-89710770 None:intergenic 40.0%
AATTACTGCAGGAAGAAGGA+TGG + Chr1:89711741-89711760 MsG0180005288.01.T01:intron 40.0%
ACACATAGCATAGCATAGCA+TGG - Chr1:89709632-89709651 None:intergenic 40.0%
ACAGACTCATCTGAGAAGAA+GGG - Chr1:89709138-89709157 None:intergenic 40.0%
ATTACTGCAGGAAGAAGGAT+GGG + Chr1:89711742-89711761 MsG0180005288.01.T01:intron 40.0%
ATTGAACCATGGGACATTCA+AGG + Chr1:89710742-89710761 MsG0180005288.01.T01:CDS 40.0%
CACTCTCTCAACACTTAAGT+TGG - Chr1:89709700-89709719 None:intergenic 40.0%
CCAACAGAAGAAGAACTTGT+AGG + Chr1:89710646-89710665 MsG0180005288.01.T01:CDS 40.0%
CCTACAAGTTCTTCTTCTGT+TGG - Chr1:89710649-89710668 None:intergenic 40.0%
CTATACCATGGTTCATAACC+TGG - Chr1:89711809-89711828 None:intergenic 40.0%
CTCTCTCTCTCTTCTTTCTT+TGG - Chr1:89710114-89710133 None:intergenic 40.0%
GATATGAGCAACAGAATGAG+TGG + Chr1:89710942-89710961 MsG0180005288.01.T01:CDS 40.0%
GTGAGTTAATCTTCCTGTTG+AGG - Chr1:89710678-89710697 None:intergenic 40.0%
GTTGGATGAAATCTAAACCC+TGG - Chr1:89710631-89710650 None:intergenic 40.0%
GTTGTTGGACTATCTAACTG+TGG - Chr1:89712046-89712065 None:intergenic 40.0%
TCAGGAGAGATCATCATCAA+TGG + Chr1:89710585-89710604 MsG0180005288.01.T01:intron 40.0%
! AACGATTGTTTTCCACAGGA+AGG + Chr1:89709661-89709680 MsG0180005288.01.T01:intron 40.0%
! CTAAAATAACTTGCCTGTGG+AGG - Chr1:89711193-89711212 None:intergenic 40.0%
! GATCAACGATTGTTTTCCAC+AGG + Chr1:89709657-89709676 MsG0180005288.01.T01:intron 40.0%
! GGAGTCTGATGGAAATGTTT+TGG + Chr1:89709359-89709378 MsG0180005288.01.T01:intron 40.0%
! TGTAGCTCATGTTGACTATG+AGG - Chr1:89712265-89712284 None:intergenic 40.0%
! TTGTAGGGTATTACCTCAAC+AGG + Chr1:89710662-89710681 MsG0180005288.01.T01:CDS 40.0%
!! GATTTTGGAAAGCTACTGGA+AGG + Chr1:89711032-89711051 MsG0180005288.01.T01:CDS 40.0%
!! TCTCTCAACACTTAAGTTGG+TGG - Chr1:89709697-89709716 None:intergenic 40.0%
AAACTTGTACCTTCAGCTGC+AGG - Chr1:89711941-89711960 None:intergenic 45.0%
ATAGGCCAGGTTATGAACCA+TGG + Chr1:89711801-89711820 MsG0180005288.01.T01:CDS 45.0%
ATGGAATCATGTGTACCTCC+AGG + Chr1:89710610-89710629 MsG0180005288.01.T01:CDS 45.0%
CAAAATTGGCAGACCATGTG+TGG - Chr1:89709932-89709951 None:intergenic 45.0%
CTTCAAAATCCTGCAGCTGA+AGG + Chr1:89711929-89711948 MsG0180005288.01.T01:CDS 45.0%
GAGAAATTCTTAGGTGGTCC+AGG + Chr1:89710063-89710082 MsG0180005288.01.T01:intron 45.0%
GCACATGCTGCACAATTGTT+GGG + Chr1:89709957-89709976 MsG0180005288.01.T01:intron 45.0%
GGATGAAATCTAAACCCTGG+AGG - Chr1:89710628-89710647 None:intergenic 45.0%
TCATAACCTGGCCTATGACT+TGG - Chr1:89711797-89711816 None:intergenic 45.0%
TGCACATGCTGCACAATTGT+TGG + Chr1:89709956-89709975 MsG0180005288.01.T01:intron 45.0%
TGGAATCATGTGTACCTCCA+GGG + Chr1:89710611-89710630 MsG0180005288.01.T01:CDS 45.0%
TTTCCAAAATCCAGCAGCAG+TGG - Chr1:89711023-89711042 None:intergenic 45.0%
! CACACATGGTCTGCCAATTT+TGG + Chr1:89709930-89709949 MsG0180005288.01.T01:intron 45.0%
! CTTCAGCTGCAGGATTTTGA+AGG - Chr1:89711931-89711950 None:intergenic 45.0%
! TTAATGGTGGGATCCACACA+TGG + Chr1:89709916-89709935 MsG0180005288.01.T01:intron 45.0%
!! CTCAACACTTAAGTTGGTGG+TGG - Chr1:89709694-89709713 None:intergenic 45.0%
!! GCTGGATTTTGGAAAGCTAC+TGG + Chr1:89711028-89711047 MsG0180005288.01.T01:CDS 45.0%
ACTAATAGAGCCACTGCTGC+TGG + Chr1:89711010-89711029 MsG0180005288.01.T01:CDS 50.0%
TTCTGAACATGGTCCTCCAC+AGG + Chr1:89711177-89711196 MsG0180005288.01.T01:intron 50.0%
!! AAGAAGGATGGGTTGTGTGC+AGG + Chr1:89711753-89711772 MsG0180005288.01.T01:CDS 50.0%
!! AGAAGGATGGGTTGTGTGCA+GGG + Chr1:89711754-89711773 MsG0180005288.01.T01:CDS 50.0%
CCAAGTCCAAGTCATAGGCC+AGG + Chr1:89711788-89711807 MsG0180005288.01.T01:CDS 55.0%
GGTGGAGAAAGACCTTCCTG+TGG - Chr1:89709676-89709695 None:intergenic 55.0%
TACAAGGGACGTGCCCCAAA+TGG + Chr1:89711112-89711131 MsG0180005288.01.T01:intron 55.0%
! CCTGGCCTATGACTTGGACT+TGG - Chr1:89711791-89711810 None:intergenic 55.0%
! GAGCCACTGCTGCTGGATTT+TGG + Chr1:89711017-89711036 MsG0180005288.01.T01:CDS 55.0%
AGGGACGTGCCCCAAATGGA+AGG + Chr1:89711116-89711135 MsG0180005288.01.T01:intron 60.0%
Chromosome Type Strat End Strand Name
Chr1 gene 89709019 89712315 89709019 ID=MsG0180005288.01;Name=MsG0180005288.01
Chr1 mRNA 89709019 89712315 89709019 ID=MsG0180005288.01.T01;Parent=MsG0180005288.01;Name=MsG0180005288.01.T01;_AED=0.49;_eAED=0.49;_QI=0|0|0|1|0.66|0.5|4|0|298
Chr1 exon 89709019 89709039 89709019 ID=MsG0180005288.01.T01:exon:47822;Parent=MsG0180005288.01.T01
Chr1 exon 89710589 89710763 89710589 ID=MsG0180005288.01.T01:exon:47823;Parent=MsG0180005288.01.T01
Chr1 exon 89710927 89711063 89710927 ID=MsG0180005288.01.T01:exon:47824;Parent=MsG0180005288.01.T01
Chr1 exon 89711752 89712315 89711752 ID=MsG0180005288.01.T01:exon:47825;Parent=MsG0180005288.01.T01
Chr1 CDS 89709019 89709039 89709019 ID=MsG0180005288.01.T01:cds;Parent=MsG0180005288.01.T01
Chr1 CDS 89710589 89710763 89710589 ID=MsG0180005288.01.T01:cds;Parent=MsG0180005288.01.T01
Chr1 CDS 89710927 89711063 89710927 ID=MsG0180005288.01.T01:cds;Parent=MsG0180005288.01.T01
Chr1 CDS 89711752 89712315 89711752 ID=MsG0180005288.01.T01:cds;Parent=MsG0180005288.01.T01
Gene Sequence

>MsG0180005288.01.T01

ATGACATCAAATCAAATTACTGAGAGATCATCATCAATGGATATGGAATCATGTGTACCTCCAGGGTTTAGATTTCATCCAACAGAAGAAGAACTTGTAGGGTATTACCTCAACAGGAAGATTAACTCACTCAAAATTGATCTAGATGTTATTGTTGAGGTTGATCTCTACAAAATTGAACCATGGGACATTCAAGATAGATGCAAGCTAGGATATGAGCAACAGAATGAGTGGTACTTTTTCAGCCACAAAGATAAGAAATATCCTACAGGAACAAGAACTAATAGAGCCACTGCTGCTGGATTTTGGAAAGCTACTGGAAGGGATAAAGCTGAAGAAGGATGGGTTGTGTGCAGGGCATTTAAAAAGCCAAGTCCAAGTCATAGGCCAGGTTATGAACCATGGTATAGTAATCAACAACAACCACAGTATTTCAGATCAGATGATCAAAGCTATGCAACTACAAGACCTTTATCAATTACAGATATTTTGCATGAAAATCGTTTACTCCTTCAAAATCCTGCAGCTGAAGGTACAAGTTTTAGTCACCCCTTTAGCAATGATCAACAGTTTCTATCAAACCAAAATACTCTTGTTATGGACAATAAACAACTCATTGAACTACCACAGTTAGATAGTCCAACAACAAGTTTTGCAATCAAAGAAAATACTCATCACAATGGACTCACAATAGAAGAATATTGCAGTGAAGAAAGGAGCATTAATAATAATAACAATGGACAAGTAATTGATTGGAAAAGCTTGGACAATTTGTTCAGTTCAAATCAATTTACAGATACAGCTAATTACTTTTCAAATCAAAATAGCATGCCATTGATGATACCTCATAGTCAACATGAGCTACAATCTCATCAAATCAAGCTAATCATATCTTAG
Protein sequence

>MsG0180005288.01.T01

MTSNQITERSSSMDMESCVPPGFRFHPTEEELVGYYLNRKINSLKIDLDVIVEVDLYKIEPWDIQDRCKLGYEQQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAEEGWVVCRAFKKPSPSHRPGYEPWYSNQQQPQYFRSDDQSYATTRPLSITDILHENRLLLQNPAAEGTSFSHPFSNDQQFLSNQNTLVMDNKQLIELPQLDSPTTSFAIKENTHHNGLTIEEYCSEERSINNNNNGQVIDWKSLDNLFSSNQFTDTANYFSNQNSMPLMIPHSQHELQSHQIKLIIS*