AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180005352.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180005352.01.T01 MTR_1g098370 86.410 493 35 1 178 638 1 493 0.0 861
MsG0180005352.01.T01 MTR_1g098000 86.410 493 32 2 178 638 1 490 0.0 858
MsG0180005352.01.T01 MTR_1g098030 83.140 172 17 2 434 593 30 201 1.81e-87 271
MsG0180005352.01.T01 MTR_3g088625 39.506 243 137 4 194 435 1251 1484 2.40e-50 189
MsG0180005352.01.T01 MTR_3g088625 39.506 243 137 4 194 435 1145 1378 2.47e-50 189
MsG0180005352.01.T01 MTR_6g059310 41.981 212 120 3 206 417 45 253 5.30e-44 160
MsG0180005352.01.T01 MTR_6g059310 41.981 212 120 3 206 417 45 253 8.48e-44 160
MsG0180005352.01.T01 MTR_0071s0100 34.188 234 144 4 206 439 150 373 1.83e-35 138
MsG0180005352.01.T01 MTR_8g078490 36.571 175 90 4 258 414 1081 1252 3.18e-22 102
MsG0180005352.01.T01 MTR_5g018850 35.503 169 94 3 257 410 1334 1502 2.26e-21 100
MsG0180005352.01.T01 MTR_4g132610 34.756 164 88 3 264 410 881 1042 3.02e-21 99.4
MsG0180005352.01.T01 MTR_2g036060 38.406 138 81 2 287 424 1044 1177 3.05e-21 99.4
MsG0180005352.01.T01 MTR_2g036060 38.406 138 81 2 287 424 1069 1202 3.27e-21 99.4
MsG0180005352.01.T01 MTR_5g016870 34.021 194 106 4 208 394 653 831 4.84e-20 95.5
MsG0180005352.01.T01 MTR_7g117355 38.667 150 86 4 269 414 816 963 2.08e-19 93.6
MsG0180005352.01.T01 MTR_3g091310 36.242 149 91 3 269 414 915 1062 2.85e-19 93.2
MsG0180005352.01.T01 MTR_3g091310 36.242 149 91 3 269 414 821 968 2.90e-19 92.8
MsG0180005352.01.T01 MTR_8g042750 30.435 207 94 6 252 415 489 688 5.29e-19 91.7
MsG0180005352.01.T01 MTR_1g008230 36.242 149 91 3 269 414 886 1033 5.72e-19 92.0
MsG0180005352.01.T01 MTR_1g008230 36.242 149 91 3 269 414 608 755 7.18e-19 91.3
MsG0180005352.01.T01 MTR_8g027725 36.913 149 90 3 269 414 801 948 1.20e-18 90.9
MsG0180005352.01.T01 MTR_8g027725 36.913 149 90 3 269 414 786 933 1.35e-18 90.9
MsG0180005352.01.T01 MTR_7g021365 36.943 157 89 3 281 436 911 1058 2.77e-18 89.7
MsG0180005352.01.T01 MTR_7g055660 38.281 128 70 2 276 396 583 708 3.80e-18 89.0
MsG0180005352.01.T01 MTR_1g012910 37.324 142 82 3 279 414 530 670 5.24e-18 88.6
MsG0180005352.01.T01 MTR_1g012890 35.461 141 86 2 279 414 227 367 5.54e-18 86.7
MsG0180005352.01.T01 MTR_8g078505 33.735 166 96 3 258 410 369 533 6.57e-18 87.8
MsG0180005352.01.T01 MTR_1g012910 37.324 142 82 3 279 414 367 507 7.72e-18 87.4
MsG0180005352.01.T01 MTR_1g048950 37.107 159 77 7 266 411 381 529 9.02e-18 87.4
MsG0180005352.01.T01 MTR_5g013420 34.171 199 91 9 252 414 894 1088 9.45e-18 88.2
MsG0180005352.01.T01 MTR_4g010830 32.020 203 90 8 252 414 785 979 1.30e-17 87.8
MsG0180005352.01.T01 MTR_1g086980 33.333 192 106 5 208 393 613 788 1.61e-17 87.4
MsG0180005352.01.T01 MTR_1g086980 33.333 192 106 5 208 393 603 778 1.74e-17 87.0
MsG0180005352.01.T01 MTR_1g086980 33.333 192 106 5 208 393 623 798 1.76e-17 87.0
MsG0180005352.01.T01 MTR_1g086980 33.333 192 106 5 208 393 572 747 2.37e-17 86.7
MsG0180005352.01.T01 MTR_1g086980 33.333 192 106 5 208 393 551 726 2.40e-17 86.7
MsG0180005352.01.T01 MTR_7g088370 31.892 185 102 6 252 414 522 704 3.20e-17 86.3
MsG0180005352.01.T01 MTR_1g086980 33.333 192 106 5 208 393 423 598 3.27e-17 85.9
MsG0180005352.01.T01 MTR_5g013420 33.668 199 92 9 252 414 894 1088 1.17e-16 84.7
MsG0180005352.01.T01 MTR_7g445600 30.603 232 103 10 200 392 144 356 2.19e-16 81.6
MsG0180005352.01.T01 MTR_1g097800 49.425 87 41 2 48 134 1 84 6.07e-16 75.5
MsG0180005352.01.T01 MTR_7g450730 29.808 208 113 9 228 410 301 500 5.99e-15 78.2
MsG0180005352.01.T01 MTR_3g011440 30.964 197 97 7 252 410 464 659 1.10e-14 77.8
MsG0180005352.01.T01 MTR_6g027690 31.788 151 87 4 258 392 247 397 2.20e-13 73.2
MsG0180005352.01.T01 MTR_7g109560 36.697 109 67 1 286 394 623 729 1.95e-12 70.9
MsG0180005352.01.T01 MTR_7g084090 29.703 202 102 7 252 414 556 756 1.17e-11 68.6
MsG0180005352.01.T01 MTR_1g069570 28.241 216 114 9 229 410 533 741 3.67e-11 66.6
MsG0180005352.01.T01 MTR_6g061200 29.348 184 97 8 252 414 493 664 3.80e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180005352.01.T01 AT1G76710 61.159 466 134 5 211 630 25 489 0.0 560
MsG0180005352.01.T01 AT1G76710 61.159 466 134 5 211 630 25 489 0.0 560
MsG0180005352.01.T01 AT1G76710 60.297 471 131 6 215 630 29 498 0.0 552
MsG0180005352.01.T01 AT1G76710 57.809 493 134 6 211 630 25 516 0.0 546
MsG0180005352.01.T01 AT1G77300 41.704 223 122 4 216 435 968 1185 4.33e-51 191
MsG0180005352.01.T01 AT1G77300 41.704 223 122 4 216 435 968 1185 5.33e-51 191
MsG0180005352.01.T01 AT4G30860 41.436 181 100 4 240 419 294 469 6.74e-34 136
MsG0180005352.01.T01 AT3G59960 45.395 152 82 1 266 417 102 252 1.12e-32 127
MsG0180005352.01.T01 AT3G59960 45.395 152 82 1 266 417 102 252 1.12e-32 127
MsG0180005352.01.T01 AT3G59960 45.395 152 82 1 266 417 102 252 1.12e-32 127
MsG0180005352.01.T01 AT2G44150 44.737 152 83 1 266 417 107 257 1.79e-32 129
MsG0180005352.01.T01 AT3G59960 45.395 152 82 1 266 417 102 252 4.35e-32 127
MsG0180005352.01.T01 AT5G42400 42.742 124 70 1 287 410 1261 1383 3.69e-24 108
MsG0180005352.01.T01 AT5G42400 42.742 124 70 1 287 410 1261 1383 3.69e-24 108
MsG0180005352.01.T01 AT5G42400 42.742 124 70 1 287 410 1261 1383 3.69e-24 108
MsG0180005352.01.T01 AT5G42400 42.742 124 70 1 287 410 1261 1383 3.69e-24 108
MsG0180005352.01.T01 AT5G42400 42.742 124 70 1 287 410 1261 1383 3.69e-24 108
MsG0180005352.01.T01 AT5G42400 42.742 124 70 1 287 410 1261 1383 3.69e-24 108
MsG0180005352.01.T01 AT5G42400 42.742 124 70 1 287 410 1261 1383 3.69e-24 108
MsG0180005352.01.T01 AT5G42400 42.742 124 70 1 287 410 1261 1383 3.69e-24 108
MsG0180005352.01.T01 AT1G02580 33.728 169 95 3 239 402 518 674 2.55e-19 92.8
MsG0180005352.01.T01 AT4G27910 36.913 149 90 3 269 414 879 1026 2.96e-19 93.2
MsG0180005352.01.T01 AT1G05830 36.257 171 96 5 259 425 900 1061 4.34e-19 92.4
MsG0180005352.01.T01 AT1G05830 36.257 171 96 5 259 425 900 1061 4.34e-19 92.4
MsG0180005352.01.T01 AT1G05830 36.257 171 96 5 259 425 900 1061 4.34e-19 92.4
MsG0180005352.01.T01 AT1G05830 36.257 171 96 5 259 425 900 1061 4.34e-19 92.4
MsG0180005352.01.T01 AT2G35160 35.754 179 89 8 252 414 589 757 8.82e-19 91.3
MsG0180005352.01.T01 AT2G35160 35.754 179 89 8 252 414 625 793 9.76e-19 91.3
MsG0180005352.01.T01 AT2G35160 35.754 179 89 8 252 414 625 793 9.76e-19 91.3
MsG0180005352.01.T01 AT2G35160 35.754 179 89 8 252 414 625 793 9.76e-19 91.3
MsG0180005352.01.T01 AT2G35160 35.754 179 89 8 252 414 625 793 9.76e-19 91.3
MsG0180005352.01.T01 AT3G03750 35.556 180 96 7 250 410 167 345 1.82e-18 87.8
MsG0180005352.01.T01 AT3G61740 37.255 153 89 4 267 414 867 1017 4.28e-18 89.4
MsG0180005352.01.T01 AT3G61740 37.255 153 89 4 267 414 831 981 4.77e-18 89.4
MsG0180005352.01.T01 AT2G23380 36.364 154 89 2 241 394 725 869 4.78e-18 89.0
MsG0180005352.01.T01 AT2G23740 34.078 179 94 5 257 414 1199 1374 7.97e-18 88.6
MsG0180005352.01.T01 AT2G23740 34.078 179 94 5 257 414 1206 1381 8.86e-18 88.6
MsG0180005352.01.T01 AT2G23740 34.078 179 94 5 257 414 1206 1381 8.86e-18 88.6
MsG0180005352.01.T01 AT2G23740 34.078 179 94 5 257 414 1206 1381 8.86e-18 88.6
MsG0180005352.01.T01 AT2G23380 36.364 154 89 2 241 394 498 642 9.74e-18 87.8
MsG0180005352.01.T01 AT2G31650 35.673 171 97 5 259 425 879 1040 2.46e-17 87.0
MsG0180005352.01.T01 AT5G53430 35.570 149 92 3 269 414 895 1042 3.89e-17 86.3
MsG0180005352.01.T01 AT4G02020 32.474 194 105 5 208 393 648 823 6.04e-17 85.5
MsG0180005352.01.T01 AT1G17770 31.053 190 95 7 256 410 500 688 9.22e-16 81.6
MsG0180005352.01.T01 AT2G22740 32.020 203 97 9 249 414 591 789 5.67e-15 79.0
MsG0180005352.01.T01 AT2G22740 32.020 203 97 9 249 414 591 789 5.67e-15 79.0
MsG0180005352.01.T01 AT5G04940 29.648 199 103 7 252 415 474 670 8.55e-15 78.6
MsG0180005352.01.T01 AT5G04940 29.648 199 103 7 252 415 474 670 8.55e-15 78.6
MsG0180005352.01.T01 AT2G24740 31.638 177 77 7 278 415 584 755 1.32e-12 71.6
MsG0180005352.01.T01 AT2G23740 38.393 112 52 3 257 354 1206 1314 1.68e-12 71.6
MsG0180005352.01.T01 AT2G23740 38.393 112 52 3 257 354 1206 1314 1.68e-12 71.6
MsG0180005352.01.T01 AT3G04380 27.604 192 101 7 258 420 258 440 3.73e-11 66.2
MsG0180005352.01.T01 AT3G04380 27.604 192 101 7 258 420 285 467 4.17e-11 66.2
MsG0180005352.01.T01 AT3G04380 27.604 192 101 7 258 420 258 440 4.18e-11 66.2
MsG0180005352.01.T01 AT3G04380 27.604 192 101 7 258 420 285 467 4.21e-11 66.2
MsG0180005352.01.T01 AT3G04380 27.604 192 101 7 258 420 242 424 4.59e-11 65.9
MsG0180005352.01.T01 AT3G04380 27.604 192 101 7 258 420 269 451 5.17e-11 65.9

Find 132 sgRNAs with CRISPR-Local

Find 599 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GACCTTGAATTTCATAAGTA+TGG 0.188096 1:-90714566 None:intergenic
AGGCCGAGGGTGGGGTCTTT+TGG 0.223348 1:+90714358 MsG0180005352.01.T01:CDS
CTAGCTTCTGTTATGAATTT+CGG 0.234343 1:-90717254 None:intergenic
ACCATTGTTTGGATTTAAAT+AGG 0.234502 1:-90712983 None:intergenic
GTGCTTCCTTTGATGCTAAA+AGG 0.263819 1:-90716312 None:intergenic
CAAGATCCCGTTTGGTATCT+TGG 0.292071 1:-90716157 None:intergenic
TTATTCCTTGGTACACTTCA+TGG 0.295482 1:-90708707 None:intergenic
CAAGATTTATAAACCATTCC+TGG 0.303845 1:+90714741 MsG0180005352.01.T01:CDS
CAACCTTGTACCCTTTGATT+TGG 0.324386 1:+90712900 MsG0180005352.01.T01:CDS
CAGTGCTGGTTAATACATTT+AGG 0.324830 1:-90713253 None:intergenic
GCACTGGAAGATATTCCTAT+TGG 0.334570 1:+90714963 MsG0180005352.01.T01:CDS
CAAACTGTGAGACAAGAAAA+TGG 0.346413 1:+90714907 MsG0180005352.01.T01:CDS
AGCAGGAGGATACTTATCTA+TGG 0.346424 1:+90715506 MsG0180005352.01.T01:intron
TGGGCTGGTATACCATTGTT+TGG 0.363879 1:-90712994 None:intergenic
AGCGTATCAAGGATTAAAAT+TGG 0.383268 1:+90708632 MsG0180005352.01.T01:CDS
AGGTGGAGTGTGGAGTATAA+TGG 0.385958 1:+90712933 MsG0180005352.01.T01:CDS
ATAAGTATGGGATCTGCGTT+TGG 0.395386 1:-90714553 None:intergenic
ATCCTTCTCGTGTTCTTCAA+TGG 0.405165 1:-90716856 None:intergenic
CAATTCTTTCACTTATTCCT+TGG 0.405319 1:-90708719 None:intergenic
TTTAGACAATATGGCAAAGA+TGG 0.406595 1:+90708509 MsG0180005352.01.T01:CDS
ATTCTTTGTACAATGAAATA+CGG 0.410692 1:+90716829 MsG0180005352.01.T01:CDS
GGATTTGTTTATCAGGTCCT+AGG 0.410964 1:-90717154 None:intergenic
AGCACTTGCAGTTTGTCAAC+TGG 0.416472 1:+90717341 MsG0180005352.01.T01:three_prime_UTR
TCCTCCGCAGAGTCATATAA+AGG 0.419793 1:-90715954 None:intergenic
ATTCTGTGAATCATCAATTA+CGG 0.429873 1:-90717080 None:intergenic
CTCAAATGTTCTGAATTCCT+TGG 0.432418 1:+90715056 MsG0180005352.01.T01:CDS
TTTCATTGTACAAAGAATCA+AGG 0.435719 1:-90716824 None:intergenic
TTCTCGTGTTCTTCAATGGC+AGG 0.436989 1:-90716852 None:intergenic
CCTTGTACCCTTTGATTTGG+AGG 0.437806 1:+90712903 MsG0180005352.01.T01:CDS
ACTTCTCTTTATCTCTGTGC+AGG 0.442400 1:+90713144 MsG0180005352.01.T01:CDS
AAGATCCCGTTTGGTATCTT+GGG 0.447692 1:-90716156 None:intergenic
CTGAATTCGATTGGGATCAA+TGG 0.457029 1:+90716077 MsG0180005352.01.T01:CDS
TATTCCTATTGGAACTGAAC+TGG 0.465129 1:+90714974 MsG0180005352.01.T01:CDS
TCCCATACTTATGAAATTCA+AGG 0.467960 1:+90714564 MsG0180005352.01.T01:CDS
TTGAAGTGGTTTACCAGGAA+TGG 0.469527 1:-90714754 None:intergenic
ACCTTGAATTTCATAAGTAT+GGG 0.471125 1:-90714565 None:intergenic
ATGCCGCTAGGGCAAAATCC+AGG 0.473906 1:-90713284 None:intergenic
CCTGACAGTGCATGTGGAGA+TGG 0.474108 1:+90713227 MsG0180005352.01.T01:CDS
AGTAGCAGAGAAGTGGATAC+AGG 0.474675 1:+90716902 MsG0180005352.01.T01:CDS
GTTCAACCGCTGAATTCGAT+TGG 0.477723 1:+90716068 MsG0180005352.01.T01:CDS
TTTGGCTGATGAGGAAATCA+AGG 0.479939 1:+90714376 MsG0180005352.01.T01:CDS
TCCATCGATGCAACTAGAAA+AGG 0.481552 1:+90714710 MsG0180005352.01.T01:CDS
TATGCCAGTTCAGTTCCAAT+AGG 0.481653 1:-90714978 None:intergenic
AAAACTGAAGGCCGAGGGTG+GGG 0.484563 1:+90714350 MsG0180005352.01.T01:CDS
TCGATTGGGATCAATGGCTT+AGG 0.486502 1:+90716083 MsG0180005352.01.T01:CDS
AGCTTTCAGTATAATAGCCA+TGG 0.489595 1:-90716015 None:intergenic
ACTGCAAGTGCTGGTCTACT+AGG 0.492481 1:-90717330 None:intergenic
CGAAATTCATAACAGAAGCT+AGG 0.492911 1:+90717255 MsG0180005352.01.T01:three_prime_UTR
AGGATATAATACAATTCGAT+TGG 0.495219 1:-90712963 None:intergenic
AAGGCACCCGGCCAAGCAAA+AGG 0.495569 1:+90716999 MsG0180005352.01.T01:CDS
TGTTGCTTGTACTCCTCAAA+AGG 0.496894 1:+90716980 MsG0180005352.01.T01:CDS
AGAGTTAGTGCTGGTGCACT+AGG 0.499008 1:-90717212 None:intergenic
TTCAACCGCTGAATTCGATT+GGG 0.499606 1:+90716069 MsG0180005352.01.T01:CDS
CCATCTCCACATGCACTGTC+AGG 0.499632 1:-90713227 None:intergenic
TGTCGTAGATACACTGTCTT+GGG 0.502526 1:-90716880 None:intergenic
ACCAGCACTGAATGCACCCC+TGG 0.503846 1:+90713266 MsG0180005352.01.T01:CDS
GATTTGGAGGGTAGGAAAGG+TGG 0.504546 1:+90712916 MsG0180005352.01.T01:CDS
AGGGTAGGAAAGGTGGAGTG+TGG 0.507890 1:+90712923 MsG0180005352.01.T01:CDS
CCTCCAAATCAAAGGGTACA+AGG 0.511073 1:-90712903 None:intergenic
TGCCGCTAGGGCAAAATCCA+GGG 0.511652 1:-90713283 None:intergenic
CTAGGTTCTGTTATGAACTT+CGG 0.514327 1:-90717136 None:intergenic
AAGAGTTGGAATATTTGCAC+TGG 0.522066 1:+90714947 MsG0180005352.01.T01:CDS
TTCATTGTACAAAGAATCAA+GGG 0.526900 1:-90716823 None:intergenic
TCCAGGGGTGCATTCAGTGC+TGG 0.531693 1:-90713267 None:intergenic
AGTTGACAAACTGCAAGTGC+TGG 0.532077 1:-90717339 None:intergenic
GAATTGATAATTATGAGTCC+CGG 0.534575 1:+90708736 MsG0180005352.01.T01:CDS
GAATATTATAAAGCGTATCA+AGG 0.536418 1:+90708621 MsG0180005352.01.T01:CDS
AATGGTTTATAAATCTTGCA+AGG 0.536559 1:-90714736 None:intergenic
CAAATCAAAGGGTACAAGGT+TGG 0.537767 1:-90712899 None:intergenic
CAGCCAAAAGACCCCACCCT+CGG 0.537785 1:-90714361 None:intergenic
TTCCTACCCTCCAAATCAAA+GGG 0.538753 1:-90712910 None:intergenic
ACAAAGTTATTTAAAACTGA+AGG 0.541788 1:+90714338 MsG0180005352.01.T01:CDS
CTGTCGTAGATACACTGTCT+TGG 0.543309 1:-90716881 None:intergenic
ACAAGAAAATGGAATGTCAT+GGG 0.544715 1:+90714918 MsG0180005352.01.T01:CDS
TGTACTCCCAAGATACCAAA+CGG 0.546142 1:+90716150 MsG0180005352.01.T01:CDS
TTTAGCATCAAAGGAAGCAC+AGG 0.547737 1:+90716315 MsG0180005352.01.T01:CDS
TTTCCTACCCTCCAAATCAA+AGG 0.551772 1:-90712911 None:intergenic
TCTCTAAGAATTGATACAGT+AGG 0.554329 1:+90708435 MsG0180005352.01.T01:CDS
TGATTGATATGAATGTATTG+AGG 0.557044 1:-90711111 None:intergenic
TTTGATTTGGAGGGTAGGAA+AGG 0.558625 1:+90712913 MsG0180005352.01.T01:CDS
TGAATGGTTTGGAGGTGCAA+AGG 0.560782 1:+90715013 MsG0180005352.01.T01:CDS
CTGACAGTGCATGTGGAGAT+GGG 0.561478 1:+90713228 MsG0180005352.01.T01:CDS
GCAGGAGGATACTTATCTAT+GGG 0.561610 1:+90715507 MsG0180005352.01.T01:intron
TAAAACTGAAGGCCGAGGGT+GGG 0.562493 1:+90714349 MsG0180005352.01.T01:CDS
CTTGTACCCTTTGATTTGGA+GGG 0.566230 1:+90712904 MsG0180005352.01.T01:CDS
CTACGACAGTAGCAGAGAAG+TGG 0.567208 1:+90716895 MsG0180005352.01.T01:CDS
AGCATCAAAGGAAGCACAGG+AGG 0.568189 1:+90716318 MsG0180005352.01.T01:CDS
GACAAGAAAATGGAATGTCA+TGG 0.568296 1:+90714917 MsG0180005352.01.T01:CDS
GCATAAGAAGCAGAAGGAGG+AGG 0.570658 1:+90713166 MsG0180005352.01.T01:CDS
ATATTGCTATATGTGAATGC+AGG 0.572676 1:+90713189 MsG0180005352.01.T01:CDS
TTGATGATTCACAGAATACA+TGG 0.573245 1:+90717086 MsG0180005352.01.T01:three_prime_UTR
GTCTACTAGGTAGCATAACA+TGG 0.583316 1:-90717317 None:intergenic
CGAAGTTCATAACAGAACCT+AGG 0.583850 1:+90717137 MsG0180005352.01.T01:three_prime_UTR
TATGGGAAGATGATGATGAC+AGG 0.584972 1:+90715524 MsG0180005352.01.T01:CDS
TTCCTTGGAGCAAAATCTCG+TGG 0.586918 1:+90715071 MsG0180005352.01.T01:CDS
TACCCTTTGATTTGGAGGGT+AGG 0.587571 1:+90712908 MsG0180005352.01.T01:CDS
TTATTTAAAACTGAAGGCCG+AGG 0.589346 1:+90714344 MsG0180005352.01.T01:CDS
GATGAACTCACGTCAAATGT+TGG 0.593891 1:+90715975 MsG0180005352.01.T01:CDS
GGCTTCCTGCCTAAAACTCA+AGG 0.598288 1:+90716923 MsG0180005352.01.T01:CDS
TGCCATTGAAGAACACGAGA+AGG 0.599044 1:+90716854 MsG0180005352.01.T01:CDS
ACTGAAAGCTGAAGAACCAT+CGG 0.600098 1:+90716028 MsG0180005352.01.T01:CDS
GTGCAGGCATAAGAAGCAGA+AGG 0.601872 1:+90713160 MsG0180005352.01.T01:CDS
TCCTATTTAAATCCAAACAA+TGG 0.603096 1:+90712982 MsG0180005352.01.T01:CDS
TTAAAACTGAAGGCCGAGGG+TGG 0.605393 1:+90714348 MsG0180005352.01.T01:CDS
TTTAAAACAGTGGACTCCGA+TGG 0.605914 1:-90716044 None:intergenic
GTGCACTAGGTAGCATAACA+TGG 0.607288 1:-90717199 None:intergenic
GAAAAGAAAAGATGACGCTA+CGG 0.608952 1:+90716797 MsG0180005352.01.T01:intron
GTACTCCCAAGATACCAAAC+GGG 0.609050 1:+90716151 MsG0180005352.01.T01:CDS
TGTACAGAGTGAACAATCCA+TGG 0.611538 1:+90715998 MsG0180005352.01.T01:CDS
GAAAACTGAAATAGAAAGCG+AGG 0.615849 1:+90716118 MsG0180005352.01.T01:CDS
TCCTTTATATGACTCTGCGG+AGG 0.618388 1:+90715953 MsG0180005352.01.T01:CDS
TATTTAAAACTGAAGGCCGA+GGG 0.619845 1:+90714345 MsG0180005352.01.T01:CDS
GCAAAGGTTCGCTGCCTCTG+TGG 0.623435 1:+90715029 MsG0180005352.01.T01:CDS
GCCGCTAGGGCAAAATCCAG+GGG 0.626592 1:-90713282 None:intergenic
GGCAAATCTTCAGCAGCATG+AGG 0.632645 1:-90711090 None:intergenic
TTCTTGCAATAACTTTGACA+AGG 0.635149 1:-90708664 None:intergenic
AGTAGGTGACACAACAACCC+TGG 0.637535 1:+90708452 MsG0180005352.01.T01:CDS
CAGTTTGTCATTGAATACTG+TGG 0.640591 1:+90714507 MsG0180005352.01.T01:CDS
CAAGAAAATGGAATGTCATG+GGG 0.642373 1:+90714919 MsG0180005352.01.T01:CDS
CGGTTGAACATTTAAAACAG+TGG 0.645180 1:-90716054 None:intergenic
CATCAATTACGGATTAGATG+AGG 0.646637 1:-90717069 None:intergenic
CAGGCATAAGAAGCAGAAGG+AGG 0.647886 1:+90713163 MsG0180005352.01.T01:CDS
GATGATCCTGACAGTGCATG+TGG 0.654583 1:+90713221 MsG0180005352.01.T01:CDS
TTGATCCCAATCGAATTCAG+CGG 0.659698 1:-90716074 None:intergenic
AACATTTGAGCGCACCACAG+AGG 0.676482 1:-90715043 None:intergenic
TGTACTCCTCAAAAGGCACC+CGG 0.683773 1:+90716987 MsG0180005352.01.T01:CDS
AAGAAAATGGAATGTCATGG+GGG 0.698806 1:+90714920 MsG0180005352.01.T01:CDS
AATTCCTTTATATGACTCTG+CGG 0.704826 1:+90715950 MsG0180005352.01.T01:CDS
ATGGCAAAGATGGACAATTG+CGG 0.705253 1:+90708519 MsG0180005352.01.T01:CDS
ACTATCCATGAAGTGTACCA+AGG 0.711842 1:+90708702 MsG0180005352.01.T01:CDS
TTCCTGCCTAAAACTCAAGG+CGG 0.738527 1:+90716926 MsG0180005352.01.T01:CDS
TTGGCAATGAAGGAAAAGCA+TGG 0.742700 1:+90708381 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAAATGTTCAAAATATTT+TGG - Chr1:90712209-90712228 None:intergenic 10.0%
!! AAACAAAATTGTAATAAAGA+GGG - Chr1:90711001-90711020 None:intergenic 15.0%
!! AAAGAAAAATAACCATATTA+AGG - Chr1:90714427-90714446 None:intergenic 15.0%
!! AATCCTAATATTAAAAGAAA+TGG + Chr1:90714782-90714801 MsG0180005352.01.T01:intron 15.0%
!! AGAATATATCATATATGAAT+TGG - Chr1:90714037-90714056 None:intergenic 15.0%
!! ATTATTAAAATGATCATCTT+TGG - Chr1:90716479-90716498 None:intergenic 15.0%
!! TAAATTATAAACGCATTTAT+CGG - Chr1:90709625-90709644 None:intergenic 15.0%
!! TTGTTAAAAATATTATCACT+CGG + Chr1:90711257-90711276 MsG0180005352.01.T01:intron 15.0%
!!! AAAATAACAGAAAAAGATTT+TGG - Chr1:90717178-90717197 None:intergenic 15.0%
!!! AAATTTTCAATGTAGATAAA+TGG + Chr1:90709016-90709035 MsG0180005352.01.T01:intron 15.0%
!!! CATTTTCTTATCATTTATTT+AGG + Chr1:90711173-90711192 MsG0180005352.01.T01:intron 15.0%
!!! TCTTTTTCATTGATTATTAT+TGG + Chr1:90715441-90715460 MsG0180005352.01.T01:intron 15.0%
!! AATAATCAATGAAAAAGAGA+AGG - Chr1:90715439-90715458 None:intergenic 20.0%
!! AATATTGAAAATTATTGGAC+CGG - Chr1:90711456-90711475 None:intergenic 20.0%
!! AATTCAATATGGAAAAGTTT+CGG - Chr1:90712039-90712058 None:intergenic 20.0%
!! ACATAGATCTGTTATAATTT+CGG + Chr1:90716552-90716571 MsG0180005352.01.T01:intron 20.0%
!! ATCATGATCTAAATTCTTAT+TGG - Chr1:90710566-90710585 None:intergenic 20.0%
!! ATTACTGTTATGAGTTATTT+AGG + Chr1:90711336-90711355 MsG0180005352.01.T01:intron 20.0%
!! ATTCTTTGTACAATGAAATA+CGG + Chr1:90716829-90716848 MsG0180005352.01.T01:CDS 20.0%
!! ATTTAGTAGAACTAAAACAA+AGG - Chr1:90712498-90712517 None:intergenic 20.0%
!! CGTATATATATTATGTGTTT+GGG + Chr1:90708833-90708852 MsG0180005352.01.T01:intron 20.0%
!! GAAACAAAATTGTAATAAAG+AGG - Chr1:90711002-90711021 None:intergenic 20.0%
!! GATTATTCAATCAAAGATTT+GGG - Chr1:90710191-90710210 None:intergenic 20.0%
!! GTTCTTACAAATTATAACAA+GGG - Chr1:90716534-90716553 None:intergenic 20.0%
!! TATAAAGCATATAAGTAACT+AGG + Chr1:90708803-90708822 MsG0180005352.01.T01:intron 20.0%
!! TATGATACAGTAAAATTTGT+TGG + Chr1:90710732-90710751 MsG0180005352.01.T01:intron 20.0%
!! TCGTATATATATTATGTGTT+TGG + Chr1:90708832-90708851 MsG0180005352.01.T01:intron 20.0%
!! TGTTCTTACAAATTATAACA+AGG - Chr1:90716535-90716554 None:intergenic 20.0%
!! TTCAGTGTTAATAAATAATG+AGG + Chr1:90715299-90715318 MsG0180005352.01.T01:intron 20.0%
!! TTGAAGAATATATCCATTAA+AGG - Chr1:90711907-90711926 None:intergenic 20.0%
!! TTTAGTAGAACTAAAACAAA+GGG - Chr1:90712497-90712516 None:intergenic 20.0%
!! TTTATAATCAGAAAAAGAGA+GGG - Chr1:90712136-90712155 None:intergenic 20.0%
!! TTTGTTTGTTTATTTCATAC+AGG + Chr1:90714479-90714498 MsG0180005352.01.T01:intron 20.0%
!!! AAATGATTTTTTTTATGCGA+AGG + Chr1:90711134-90711153 MsG0180005352.01.T01:CDS 20.0%
!!! ACAAAGTTATTTAAAACTGA+AGG + Chr1:90714338-90714357 MsG0180005352.01.T01:CDS 20.0%
!!! AGATTTTGTATTTGTTTATC+AGG - Chr1:90717282-90717301 None:intergenic 20.0%
!!! CATATGACTATAATTTTGAA+TGG + Chr1:90714997-90715016 MsG0180005352.01.T01:CDS 20.0%
!!! GTTTCATCATATATTTTTGT+AGG - Chr1:90710123-90710142 None:intergenic 20.0%
!!! TAAAATTTGTTGGTGAAAAA+GGG + Chr1:90710742-90710761 MsG0180005352.01.T01:intron 20.0%
!!! TCAGTTTTATAAAGAAAGAA+AGG - Chr1:90711534-90711553 None:intergenic 20.0%
!!! TGCATTTTTTTTTTTTTGAG+AGG + Chr1:90713475-90713494 MsG0180005352.01.T01:intron 20.0%
!!! TTATGAGTTATTTAGGTTAT+AGG + Chr1:90711343-90711362 MsG0180005352.01.T01:intron 20.0%
!!! TTTTATAATCAGAAAAAGAG+AGG - Chr1:90712137-90712156 None:intergenic 20.0%
!!! TTTTCCTATTGATATTGTTT+AGG + Chr1:90708927-90708946 MsG0180005352.01.T01:intron 20.0%
! AAAAACTTTAATCGTTATGC+TGG - Chr1:90709209-90709228 None:intergenic 25.0%
! AAATCAAGGTAATCATATGA+TGG + Chr1:90714390-90714409 MsG0180005352.01.T01:intron 25.0%
! AACATCGATCAATCAATTAA+CGG + Chr1:90711704-90711723 MsG0180005352.01.T01:intron 25.0%
! AACTTGTAGAACAAAATAAC+CGG - Chr1:90713533-90713552 None:intergenic 25.0%
! AATAAGTAGGCAATGAAAAT+AGG - Chr1:90713962-90713981 None:intergenic 25.0%
! AATCAAGGTAATCATATGAT+GGG + Chr1:90714391-90714410 MsG0180005352.01.T01:intron 25.0%
! AATGGTTTATAAATCTTGCA+AGG - Chr1:90714739-90714758 None:intergenic 25.0%
! ACAATATCAATAGGAAAACA+AGG - Chr1:90708925-90708944 None:intergenic 25.0%
! ACCATTGTTTGGATTTAAAT+AGG - Chr1:90712986-90713005 None:intergenic 25.0%
! ACCTTGAATTTCATAAGTAT+GGG - Chr1:90714568-90714587 None:intergenic 25.0%
! ACTACAAAGTTAAAATACCA+AGG - Chr1:90716455-90716474 None:intergenic 25.0%
! AGGATATAATACAATTCGAT+TGG - Chr1:90712966-90712985 None:intergenic 25.0%
! AGTAAAAACCATCATTCTTA+TGG + Chr1:90712427-90712446 MsG0180005352.01.T01:intron 25.0%
! ATAGAAATTGTCGAAAAAAG+AGG + Chr1:90709666-90709685 MsG0180005352.01.T01:intron 25.0%
! ATAGGATATGACAAAATTCA+AGG - Chr1:90713944-90713963 None:intergenic 25.0%
! ATATATTCTGATAGCAAGAA+AGG + Chr1:90714048-90714067 MsG0180005352.01.T01:intron 25.0%
! ATATTCTTCAATGTAACTTC+CGG + Chr1:90711916-90711935 MsG0180005352.01.T01:intron 25.0%
! ATGATCGAAGAAATTTGAAT+AGG - Chr1:90710846-90710865 None:intergenic 25.0%
! ATGTCCTAAACAATATCAAT+AGG - Chr1:90708934-90708953 None:intergenic 25.0%
! ATTCAATATGGAAAAGTTTC+GGG - Chr1:90712038-90712057 None:intergenic 25.0%
! ATTCTGTGAATCATCAATTA+CGG - Chr1:90717083-90717102 None:intergenic 25.0%
! CAGCGAATATTGAAAATTAT+TGG - Chr1:90711461-90711480 None:intergenic 25.0%
! CGATTATTCAATCAAAGATT+TGG - Chr1:90710192-90710211 None:intergenic 25.0%
! GAAAACGAGAATATTTCTTT+AGG - Chr1:90714238-90714257 None:intergenic 25.0%
! GAACTAAAAAATTGTATTGG+AGG - Chr1:90713765-90713784 None:intergenic 25.0%
! GAATATTATAAAGCGTATCA+AGG + Chr1:90708621-90708640 MsG0180005352.01.T01:CDS 25.0%
! GAGAACAAGAGTAATAATAA+CGG - Chr1:90709166-90709185 None:intergenic 25.0%
! GCTTTCAATTATGTTATTAG+TGG + Chr1:90716414-90716433 MsG0180005352.01.T01:intron 25.0%
! GGAACATAAATTACAAATAG+TGG - Chr1:90709508-90709527 None:intergenic 25.0%
! GGTCAAAGATTAAAATAAGT+AGG - Chr1:90713975-90713994 None:intergenic 25.0%
! GTAAAAACCATCATTCTTAT+GGG + Chr1:90712428-90712447 MsG0180005352.01.T01:intron 25.0%
! TAAAAAATTGTATTGGAGGA+GGG - Chr1:90713761-90713780 None:intergenic 25.0%
! TAAACCAAAACTTATAAACC+AGG - Chr1:90715900-90715919 None:intergenic 25.0%
! TAGAAATTGTCGAAAAAAGA+GGG + Chr1:90709667-90709686 MsG0180005352.01.T01:intron 25.0%
! TATATCCATTAAAGGAAGAT+TGG - Chr1:90711899-90711918 None:intergenic 25.0%
! TATGATGAAACTAAAGTAAC+CGG + Chr1:90710132-90710151 MsG0180005352.01.T01:intron 25.0%
! TCCTATTTAAATCCAAACAA+TGG + Chr1:90712982-90713001 MsG0180005352.01.T01:CDS 25.0%
! TGATCGAAGAAATTTGAATA+GGG - Chr1:90710845-90710864 None:intergenic 25.0%
! TGATTGATATGAATGTATTG+AGG - Chr1:90711114-90711133 None:intergenic 25.0%
! TTAGTAGAACTAAAACAAAG+GGG - Chr1:90712496-90712515 None:intergenic 25.0%
! TTCATTGTACAAAGAATCAA+GGG - Chr1:90716826-90716845 None:intergenic 25.0%
! TTTCATTGTACAAAGAATCA+AGG - Chr1:90716827-90716846 None:intergenic 25.0%
!! ACAAATCAATTTTTGTTGGT+GGG + Chr1:90711556-90711575 MsG0180005352.01.T01:intron 25.0%
!! ATAATTTTCAATATTCGCTG+AGG + Chr1:90711461-90711480 MsG0180005352.01.T01:intron 25.0%
!! ATATCCTGGTTTATAAGTTT+TGG + Chr1:90715893-90715912 MsG0180005352.01.T01:intron 25.0%
!! ATCTGAAGTAAAGTTTAAGT+AGG - Chr1:90713996-90714015 None:intergenic 25.0%
!! GAACTTTTCTGTATTCAATT+AGG + Chr1:90711389-90711408 MsG0180005352.01.T01:intron 25.0%
!! GAAGACAAATCAATTTTTGT+TGG + Chr1:90711552-90711571 MsG0180005352.01.T01:intron 25.0%
!! GAATCTGATTTTATTGAATG+CGG + Chr1:90710665-90710684 MsG0180005352.01.T01:intron 25.0%
!! GACTATAATTTTGAATGGTT+TGG + Chr1:90715002-90715021 MsG0180005352.01.T01:CDS 25.0%
!! GCCAAAATAATTGAATTTTC+AGG + Chr1:90716629-90716648 MsG0180005352.01.T01:intron 25.0%
!! GCCTGAAAATTCAATTATTT+TGG - Chr1:90716633-90716652 None:intergenic 25.0%
!! GGTCCATTTCTTTTAATATT+AGG - Chr1:90714788-90714807 None:intergenic 25.0%
!! TGATTGTCATTTATATTCTC+TGG + Chr1:90716739-90716758 MsG0180005352.01.T01:intron 25.0%
!! TTTTGTTCTACAAGTTTCTT+AGG + Chr1:90713537-90713556 MsG0180005352.01.T01:intron 25.0%
!!! AAGAATTGTTGGTTTATATC+TGG - Chr1:90709118-90709137 None:intergenic 25.0%
!!! AATTTTTGTTTTGCTTTTGC+AGG + Chr1:90714647-90714666 MsG0180005352.01.T01:intron 25.0%
!!! AGATTTTGGATTTGTTTATC+AGG - Chr1:90717164-90717183 None:intergenic 25.0%
!!! ATAAACTCGATTTTGATTGA+AGG - Chr1:90709428-90709447 None:intergenic 25.0%
!!! ATATTTTTGTAGGCATTATG+TGG - Chr1:90710113-90710132 None:intergenic 25.0%
!!! ATTAGGATTTTTGTTTGAAG+TGG - Chr1:90714771-90714790 None:intergenic 25.0%
!!! GATTATGTAAGTTTTGATAG+TGG + Chr1:90715342-90715361 MsG0180005352.01.T01:intron 25.0%
!!! GTAAAATTTGTTGGTGAAAA+AGG + Chr1:90710741-90710760 MsG0180005352.01.T01:intron 25.0%
!!! TATAATTTTGAATGGTTTGG+AGG + Chr1:90715005-90715024 MsG0180005352.01.T01:CDS 25.0%
!!! TCAACATTTTTTCGACATTT+TGG + Chr1:90708761-90708780 MsG0180005352.01.T01:CDS 25.0%
!!! TCAACTTGTTTTAGACAATA+TGG + Chr1:90708500-90708519 MsG0180005352.01.T01:CDS 25.0%
!!! TCAAGCGTTTTAACATTTAT+AGG - Chr1:90715131-90715150 None:intergenic 25.0%
!!! TTATATGGTTTTGGATAAAG+AGG - Chr1:90715799-90715818 None:intergenic 25.0%
!!! TTGAATTTGCTGAAGTTATA+TGG - Chr1:90715814-90715833 None:intergenic 25.0%
!!! TTTTGAAATTGACTCTAAGT+AGG + Chr1:90709326-90709345 MsG0180005352.01.T01:intron 25.0%
!!! TTTTTCAAAGTGAGTAAGTT+GGG + Chr1:90709843-90709862 MsG0180005352.01.T01:intron 25.0%
AAAAAGACTAAGCACAAAAG+TGG - Chr1:90715715-90715734 None:intergenic 30.0%
AAAAGACTAAGCACAAAAGT+GGG - Chr1:90715714-90715733 None:intergenic 30.0%
AAACCAACAATTCTTCATGT+TGG + Chr1:90709123-90709142 MsG0180005352.01.T01:intron 30.0%
AAAGACTTTGAATTGCTTTC+AGG - Chr1:90715760-90715779 None:intergenic 30.0%
AAAGCTAGATGATGATATTC+AGG - Chr1:90716399-90716418 None:intergenic 30.0%
AAATAGGAGGATAACAAAAC+AGG - Chr1:90714834-90714853 None:intergenic 30.0%
AAATCAAAATATCCACTAGC+TGG - Chr1:90712068-90712087 None:intergenic 30.0%
AACTCTGATATATTTGAGGA+AGG - Chr1:90709371-90709390 None:intergenic 30.0%
AAGAGTTTAACTCATTTCAC+TGG - Chr1:90709554-90709573 None:intergenic 30.0%
AATAACCTGAGAAGAAAAGT+TGG - Chr1:90710955-90710974 None:intergenic 30.0%
AATATAAAACCCTCCTCATT+TGG - Chr1:90713790-90713809 None:intergenic 30.0%
AATCAAAATATCCACTAGCT+GGG - Chr1:90712067-90712086 None:intergenic 30.0%
AATTCCTTTATATGACTCTG+CGG + Chr1:90715950-90715969 MsG0180005352.01.T01:CDS 30.0%
AATTGATTGATCGATGTTAC+CGG - Chr1:90711702-90711721 None:intergenic 30.0%
ACAAGAAAATGGAATGTCAT+GGG + Chr1:90714918-90714937 MsG0180005352.01.T01:CDS 30.0%
ACATTAAAGATGAAAGAGAG+AGG - Chr1:90712333-90712352 None:intergenic 30.0%
ACTAAAGATCCATCATAAGT+GGG - Chr1:90712467-90712486 None:intergenic 30.0%
ACTCTGATATATTTGAGGAA+GGG - Chr1:90709370-90709389 None:intergenic 30.0%
ACTTGTAGAACAAAATAACC+GGG - Chr1:90713532-90713551 None:intergenic 30.0%
AGATGATGATATTCAGGAAT+TGG - Chr1:90716393-90716412 None:intergenic 30.0%
AGCGTATCAAGGATTAAAAT+TGG + Chr1:90708632-90708651 MsG0180005352.01.T01:CDS 30.0%
ATATAAAACCCTCCTCATTT+GGG - Chr1:90713789-90713808 None:intergenic 30.0%
ATATGCATTGTTATATGCAG+GGG - Chr1:90709890-90709909 None:intergenic 30.0%
ATATTGCTATATGTGAATGC+AGG + Chr1:90713189-90713208 MsG0180005352.01.T01:CDS 30.0%
ATCAAGGTAATCATATGATG+GGG + Chr1:90714392-90714411 MsG0180005352.01.T01:intron 30.0%
ATCTCTACCAAAAGATCTAA+GGG + Chr1:90716236-90716255 MsG0180005352.01.T01:intron 30.0%
ATTAAAGGAAGATTGGACAA+TGG - Chr1:90711892-90711911 None:intergenic 30.0%
ATTGATGCTGTGTAAATTGA+TGG - Chr1:90709717-90709736 None:intergenic 30.0%
ATTGTCCAATCTTCCTTTAA+TGG + Chr1:90711891-90711910 MsG0180005352.01.T01:intron 30.0%
ATTTCATCATCTAAGTATGG+TGG - Chr1:90710293-90710312 None:intergenic 30.0%
CAAGATTTATAAACCATTCC+TGG + Chr1:90714741-90714760 MsG0180005352.01.T01:CDS 30.0%
CAATTCTTTCACTTATTCCT+TGG - Chr1:90708722-90708741 None:intergenic 30.0%
CTAAAAAATTGTATTGGAGG+AGG - Chr1:90713762-90713781 None:intergenic 30.0%
CTAGAGAAAAAACTTGATGA+TGG + Chr1:90709574-90709593 MsG0180005352.01.T01:intron 30.0%
CTAGCTTCTGTTATGAATTT+CGG - Chr1:90717257-90717276 None:intergenic 30.0%
CTTCCAATTTCTTCATTGAA+GGG - Chr1:90710422-90710441 None:intergenic 30.0%
GACCTTGAATTTCATAAGTA+TGG - Chr1:90714569-90714588 None:intergenic 30.0%
GATATGCATTGTTATATGCA+GGG - Chr1:90709891-90709910 None:intergenic 30.0%
GCTATAGATATCATTGCAAT+CGG + Chr1:90714190-90714209 MsG0180005352.01.T01:intron 30.0%
GGGGAACTAAAAAATTGTAT+TGG - Chr1:90713768-90713787 None:intergenic 30.0%
GTATTCAATTAGGCTTACTT+TGG + Chr1:90711399-90711418 MsG0180005352.01.T01:intron 30.0%
GTGATTTCATCATCTAAGTA+TGG - Chr1:90710296-90710315 None:intergenic 30.0%
GTGGTTATATGCTATTAACT+TGG - Chr1:90710094-90710113 None:intergenic 30.0%
GTGTTAATAAATAATGAGGC+AGG + Chr1:90715303-90715322 MsG0180005352.01.T01:intron 30.0%
GTTGTAAAACTTAATACTCG+CGG + Chr1:90710707-90710726 MsG0180005352.01.T01:intron 30.0%
TAACTGGTTATGTTAATCAC+TGG + Chr1:90711289-90711308 MsG0180005352.01.T01:intron 30.0%
TACAATACTTGCATATTAGC+AGG - Chr1:90714809-90714828 None:intergenic 30.0%
TACAGAGAAAAAACTAGAGT+CGG + Chr1:90710450-90710469 MsG0180005352.01.T01:intron 30.0%
TAGAGAGAAAAAGATGAAGA+GGG + Chr1:90710364-90710383 MsG0180005352.01.T01:intron 30.0%
TATTAGTCGACAAATCAACA+TGG + Chr1:90709445-90709464 MsG0180005352.01.T01:intron 30.0%
TCACATAAAGTCGAATATGA+AGG - Chr1:90711024-90711043 None:intergenic 30.0%
TCATATTTCTTGTCATATCC+TGG + Chr1:90715879-90715898 MsG0180005352.01.T01:intron 30.0%
TCCCATACTTATGAAATTCA+AGG + Chr1:90714564-90714583 MsG0180005352.01.T01:CDS 30.0%
TCCTCAAATATATCAGAGTT+AGG + Chr1:90709371-90709390 MsG0180005352.01.T01:intron 30.0%
TCTCAGGTTATTCATTCATA+TGG + Chr1:90710963-90710982 MsG0180005352.01.T01:intron 30.0%
TCTTCCAATTTCTTCATTGA+AGG - Chr1:90710423-90710442 None:intergenic 30.0%
TGCTATCTTCTACTTATGAT+TGG + Chr1:90711211-90711230 MsG0180005352.01.T01:intron 30.0%
TGTCGAAAAAATGTTGAAAC+CGG - Chr1:90708758-90708777 None:intergenic 30.0%
TGTTTAACGTGATACATTGT+GGG + Chr1:90708859-90708878 MsG0180005352.01.T01:intron 30.0%
TTAAAGGAAGATTGGACAAT+GGG - Chr1:90711891-90711910 None:intergenic 30.0%
TTAGAGAGAAAAAGATGAAG+AGG + Chr1:90710363-90710382 MsG0180005352.01.T01:intron 30.0%
TTCTTGCAATAACTTTGACA+AGG - Chr1:90708667-90708686 None:intergenic 30.0%
TTGTAAAACTTAATACTCGC+GGG + Chr1:90710708-90710727 MsG0180005352.01.T01:intron 30.0%
TTGTTTAACGTGATACATTG+TGG + Chr1:90708858-90708877 MsG0180005352.01.T01:intron 30.0%
TTTAGACAATATGGCAAAGA+TGG + Chr1:90708509-90708528 MsG0180005352.01.T01:CDS 30.0%
TTTGTTTATTTCATACAGGC+AGG + Chr1:90714483-90714502 MsG0180005352.01.T01:intron 30.0%
! AACTCACCTGATTTTTACAA+TGG - Chr1:90713310-90713329 None:intergenic 30.0%
! AACTTTTCTTCTAAGTAGTG+CGG + Chr1:90714168-90714187 MsG0180005352.01.T01:intron 30.0%
! ACTTTTTATACACATCTTCC+AGG - Chr1:90708473-90708492 None:intergenic 30.0%
! AGTGCTTGTATTTGTTAGAT+AGG + Chr1:90712260-90712279 MsG0180005352.01.T01:intron 30.0%
! AGTTAAGCCTTTTAAATGCA+TGG + Chr1:90715168-90715187 MsG0180005352.01.T01:intron 30.0%
! ATCATATGATGGGGAAATTA+AGG + Chr1:90714401-90714420 MsG0180005352.01.T01:intron 30.0%
! ATTAGTTTCTCTCTTATGGT+AGG + Chr1:90711422-90711441 MsG0180005352.01.T01:intron 30.0%
! CAACTTACTCACTTTGAAAA+AGG - Chr1:90709844-90709863 None:intergenic 30.0%
! CGAGTATTAAGTTTTACAAC+TGG - Chr1:90710707-90710726 None:intergenic 30.0%
! CTTTTTATACACATCTTCCA+GGG - Chr1:90708472-90708491 None:intergenic 30.0%
! GAATTGATAATTATGAGTCC+CGG + Chr1:90708736-90708755 MsG0180005352.01.T01:CDS 30.0%
! GACAAATCAATTTTTGTTGG+TGG + Chr1:90711555-90711574 MsG0180005352.01.T01:intron 30.0%
! GTTAAGCCTTTTAAATGCAT+GGG + Chr1:90715169-90715188 MsG0180005352.01.T01:intron 30.0%
! TAGTGCGATATTTGATTTCA+GGG - Chr1:90712696-90712715 None:intergenic 30.0%
! TCTAGAGAGTTTACACTTTT+GGG - Chr1:90712602-90712621 None:intergenic 30.0%
! TCTCTAAGAATTGATACAGT+AGG + Chr1:90708435-90708454 MsG0180005352.01.T01:CDS 30.0%
! TGAATAGGGAATTTGATTTC+TGG - Chr1:90710831-90710850 None:intergenic 30.0%
! TGGTTTCTCATTTGTTAGTA+AGG + Chr1:90709465-90709484 MsG0180005352.01.T01:intron 30.0%
! TGTCATTTCATAGTATGATC+TGG + Chr1:90716504-90716523 MsG0180005352.01.T01:intron 30.0%
! TTAGTTGATGTCAAACCTTT+GGG - Chr1:90714864-90714883 None:intergenic 30.0%
! TTCCTCATGTTTGGAATAAT+CGG + Chr1:90715483-90715502 MsG0180005352.01.T01:intron 30.0%
! TTGATGATTCACAGAATACA+TGG + Chr1:90717086-90717105 MsG0180005352.01.T01:three_prime_UTR 30.0%
! TTGCTGAAGTTATATGGTTT+TGG - Chr1:90715808-90715827 None:intergenic 30.0%
! TTTAGTTGATGTCAAACCTT+TGG - Chr1:90714865-90714884 None:intergenic 30.0%
! TTTGCATCAATTTTCTTCTG+TGG - Chr1:90716280-90716299 None:intergenic 30.0%
!! AAGTTTCTTAGGCTTTGTTT+GGG + Chr1:90713548-90713567 MsG0180005352.01.T01:intron 30.0%
!! ATTTTGACCTATGTCATACT+GGG + Chr1:90711962-90711981 MsG0180005352.01.T01:intron 30.0%
!! TGAGTTTTATAAAGCTGTGA+TGG + Chr1:90708545-90708564 MsG0180005352.01.T01:CDS 30.0%
!! TTCAAAATATTTTGGATGCG+AGG - Chr1:90712201-90712220 None:intergenic 30.0%
!! TTCTAGAGAGTTTACACTTT+TGG - Chr1:90712603-90712622 None:intergenic 30.0%
!! TTGGATTAGTTTCTCTCTTA+TGG + Chr1:90711418-90711437 MsG0180005352.01.T01:intron 30.0%
!!! CTTTTTCAAAGTGAGTAAGT+TGG + Chr1:90709842-90709861 MsG0180005352.01.T01:intron 30.0%
!!! TATTTTGACCTATGTCATAC+TGG + Chr1:90711961-90711980 MsG0180005352.01.T01:intron 30.0%
AAAGACTAAGCACAAAAGTG+GGG - Chr1:90715713-90715732 None:intergenic 35.0%
AAAGAGAGGGATAAGAGAAT+TGG - Chr1:90712123-90712142 None:intergenic 35.0%
AAAGGAAAGGCTTGGAAAAA+AGG - Chr1:90713869-90713888 None:intergenic 35.0%
AAAGTTGGCAATAAGAGGAA+TGG - Chr1:90710940-90710959 None:intergenic 35.0%
AAGAAAATGGAATGTCATGG+GGG + Chr1:90714920-90714939 MsG0180005352.01.T01:CDS 35.0%
AAGAAATAGAGGACATTGGA+AGG - Chr1:90713833-90713852 None:intergenic 35.0%
AAGACCTGTTTAATGCACAA+AGG - Chr1:90709280-90709299 None:intergenic 35.0%
AAGAGTTGGAATATTTGCAC+TGG + Chr1:90714947-90714966 MsG0180005352.01.T01:CDS 35.0%
AAGCTGGTGAACAAAGAATA+AGG - Chr1:90712161-90712180 None:intergenic 35.0%
AAGTTGGCAATAAGAGGAAT+GGG - Chr1:90710939-90710958 None:intergenic 35.0%
AATTGAGAAGAGAACCTACA+AGG - Chr1:90711622-90711641 None:intergenic 35.0%
ACTAATAGCTTGAAAGGTGA+TGG + Chr1:90715232-90715251 MsG0180005352.01.T01:intron 35.0%
AGAGAGAAAAAGATGAAGAG+GGG + Chr1:90710365-90710384 MsG0180005352.01.T01:intron 35.0%
AGAGTAAGTGGAAGAAATAG+AGG - Chr1:90713844-90713863 None:intergenic 35.0%
AGCTGGTGAACAAAGAATAA+GGG - Chr1:90712160-90712179 None:intergenic 35.0%
AGCTTTCAGTATAATAGCCA+TGG - Chr1:90716018-90716037 None:intergenic 35.0%
ATAATGATGAGATCCTAGCA+CGG + Chr1:90715663-90715682 MsG0180005352.01.T01:intron 35.0%
ATCACCTTTCAAGCTATTAG+TGG - Chr1:90715233-90715252 None:intergenic 35.0%
ATCATGCCCATGCATTTAAA+AGG - Chr1:90715178-90715197 None:intergenic 35.0%
ATCGATCAATCAATTAACGG+CGG + Chr1:90711707-90711726 MsG0180005352.01.T01:intron 35.0%
ATGAGAACTGTCATGAATCA+CGG + Chr1:90716662-90716681 MsG0180005352.01.T01:intron 35.0%
ATTGAGAAGAGAACCTACAA+GGG - Chr1:90711621-90711640 None:intergenic 35.0%
ATTGATTGATCGATGTTACC+GGG - Chr1:90711701-90711720 None:intergenic 35.0%
CAAACTGTGAGACAAGAAAA+TGG + Chr1:90714907-90714926 MsG0180005352.01.T01:CDS 35.0%
CAAGAAAATGGAATGTCATG+GGG + Chr1:90714919-90714938 MsG0180005352.01.T01:CDS 35.0%
CAATAAGAGGAATGGGAAAA+TGG - Chr1:90710932-90710951 None:intergenic 35.0%
CACTAAAGATCCATCATAAG+TGG - Chr1:90712468-90712487 None:intergenic 35.0%
CAGTTTGTCATTGAATACTG+TGG + Chr1:90714507-90714526 MsG0180005352.01.T01:CDS 35.0%
CATAATACAGAAGAGGAAGT+TGG + Chr1:90712797-90712816 MsG0180005352.01.T01:intron 35.0%
CATCTCTACCAAAAGATCTA+AGG + Chr1:90716235-90716254 MsG0180005352.01.T01:intron 35.0%
CGAAATTCATAACAGAAGCT+AGG + Chr1:90717255-90717274 MsG0180005352.01.T01:three_prime_UTR 35.0%
CTAAAGATCCATCATAAGTG+GGG - Chr1:90712466-90712485 None:intergenic 35.0%
CTAGGTTCTGTTATGAACTT+CGG - Chr1:90717139-90717158 None:intergenic 35.0%
CTCTGATATATTTGAGGAAG+GGG - Chr1:90709369-90709388 None:intergenic 35.0%
CTTGTAGAACAAAATAACCG+GGG - Chr1:90713531-90713550 None:intergenic 35.0%
GAAAACTGAAATAGAAAGCG+AGG + Chr1:90716118-90716137 MsG0180005352.01.T01:CDS 35.0%
GAAAAGAAAAGATGACGCTA+CGG + Chr1:90716797-90716816 MsG0180005352.01.T01:intron 35.0%
GAAGAAAAGTTGGCAATAAG+AGG - Chr1:90710945-90710964 None:intergenic 35.0%
GAATGGAATTGAAAGTGAAG+TGG - Chr1:90712720-90712739 None:intergenic 35.0%
GACAAGAAAATGGAATGTCA+TGG + Chr1:90714917-90714936 MsG0180005352.01.T01:CDS 35.0%
GAGAAAATTGATATATCCGC+CGG - Chr1:90712013-90712032 None:intergenic 35.0%
GCCTAACTCTGATATATTTG+AGG - Chr1:90709375-90709394 None:intergenic 35.0%
GCTGGGAGATTAATTCAATA+TGG - Chr1:90712050-90712069 None:intergenic 35.0%
GGAAAAAAGGAAAGAGTAAG+TGG - Chr1:90713856-90713875 None:intergenic 35.0%
GGACTAAAACTTAGTTACCT+TGG + Chr1:90716435-90716454 MsG0180005352.01.T01:intron 35.0%
GGATATGCATTGTTATATGC+AGG - Chr1:90709892-90709911 None:intergenic 35.0%
GGGAAATTAAGGCCTTAATA+TGG + Chr1:90714412-90714431 MsG0180005352.01.T01:intron 35.0%
GTCGAAAAAATGTTGAAACC+GGG - Chr1:90708757-90708776 None:intergenic 35.0%
GTGCTGTATTCATCTCTAAA+AGG + Chr1:90715570-90715589 MsG0180005352.01.T01:intron 35.0%
GTTCCAACATGAAGAATTGT+TGG - Chr1:90709129-90709148 None:intergenic 35.0%
GTTTCCTTTGTGCATTAAAC+AGG + Chr1:90709273-90709292 MsG0180005352.01.T01:intron 35.0%
TAAAGATCCATCATAAGTGG+GGG - Chr1:90712465-90712484 None:intergenic 35.0%
TAAAGGAAGATTGGACAATG+GGG - Chr1:90711890-90711909 None:intergenic 35.0%
TAGCAGTCTGTAGTTACAAT+CGG + Chr1:90714134-90714153 MsG0180005352.01.T01:intron 35.0%
TATAAAACCCTCCTCATTTG+GGG - Chr1:90713788-90713807 None:intergenic 35.0%
TATTCCTATTGGAACTGAAC+TGG + Chr1:90714974-90714993 MsG0180005352.01.T01:CDS 35.0%
TCACCTTTCAAGCTATTAGT+GGG - Chr1:90715232-90715251 None:intergenic 35.0%
TCTCTACCAAAAGATCTAAG+GGG + Chr1:90716237-90716256 MsG0180005352.01.T01:intron 35.0%
TGACTAAAAACTATCCCACA+AGG - Chr1:90712644-90712663 None:intergenic 35.0%
TGAGGGATCTAAATTCCAAT+GGG - Chr1:90713016-90713035 None:intergenic 35.0%
TGCTAGGATCTCATCATTAT+GGG - Chr1:90715663-90715682 None:intergenic 35.0%
TTATGAGTTCGTCAACAGAA+TGG - Chr1:90712737-90712756 None:intergenic 35.0%
TTATTCCTTGGTACACTTCA+TGG - Chr1:90708710-90708729 None:intergenic 35.0%
TTCTGTATTATGAAGCAGGA+AGG - Chr1:90712789-90712808 None:intergenic 35.0%
TTGGTTTATATCTGGCATAG+TGG - Chr1:90709110-90709129 None:intergenic 35.0%
TTGTGCATTAAACAGGTCTT+CGG + Chr1:90709280-90709299 MsG0180005352.01.T01:intron 35.0%
! AAAGTTTTCAGAGTTAGTGC+TGG - Chr1:90717224-90717243 None:intergenic 35.0%
! AATGAAGCTTTTGACGTTCT+CGG + Chr1:90717046-90717065 MsG0180005352.01.T01:CDS 35.0%
! CATTCAATTTTCCATTCCTC+TGG - Chr1:90713072-90713091 None:intergenic 35.0%
! CATTTTCTTGTCTCACAGTT+TGG - Chr1:90714909-90714928 None:intergenic 35.0%
! CGGTTGAACATTTAAAACAG+TGG - Chr1:90716057-90716076 None:intergenic 35.0%
! CTAGTGCGATATTTGATTTC+AGG - Chr1:90712697-90712716 None:intergenic 35.0%
! CTCAAATGTTCTGAATTCCT+TGG + Chr1:90715056-90715075 MsG0180005352.01.T01:CDS 35.0%
! CTTAGATCTTTTGGTAGAGA+TGG - Chr1:90716237-90716256 None:intergenic 35.0%
! CTTTTGGGCAAATAGCAATA+AGG - Chr1:90712587-90712606 None:intergenic 35.0%
! GGAGGAGATTTTAGATTATG+AGG + Chr1:90716336-90716355 MsG0180005352.01.T01:CDS 35.0%
! GTCATCTTTTCTTTTCTGCA+TGG - Chr1:90716793-90716812 None:intergenic 35.0%
! TAGTGGGTCTTAAAAACTCA+TGG - Chr1:90715216-90715235 None:intergenic 35.0%
! TATTGCCAACTTTTCTTCTC+AGG + Chr1:90710947-90710966 MsG0180005352.01.T01:intron 35.0%
! TATTTAAAACTGAAGGCCGA+GGG + Chr1:90714345-90714364 MsG0180005352.01.T01:CDS 35.0%
! TATTTCTATTCTGCTTTCCC+CGG + Chr1:90713511-90713530 MsG0180005352.01.T01:intron 35.0%
! TCGTTTTATCTGTTACTGAC+TGG + Chr1:90715599-90715618 MsG0180005352.01.T01:intron 35.0%
! TTATTTAAAACTGAAGGCCG+AGG + Chr1:90714344-90714363 MsG0180005352.01.T01:CDS 35.0%
! TTTGTTTGAAGTGGTTTACC+AGG - Chr1:90714762-90714781 None:intergenic 35.0%
!! AAAATATTTTGGATGCGAGG+CGG - Chr1:90712198-90712217 None:intergenic 35.0%
!! CAAGTTTCTTAGGCTTTGTT+TGG + Chr1:90713547-90713566 MsG0180005352.01.T01:intron 35.0%
!! CAGTGCTGGTTAATACATTT+AGG - Chr1:90713256-90713275 None:intergenic 35.0%
!! CATCAATTACGGATTAGATG+AGG - Chr1:90717072-90717091 None:intergenic 35.0%
!! TAAGGCTTTGTTTGCAAGTT+TGG - Chr1:90713901-90713920 None:intergenic 35.0%
!! TTTGATTTTCCGTCTTCTTG+CGG - Chr1:90710241-90710260 None:intergenic 35.0%
!! TTTTGCTTTTGCAGGTCTTA+AGG + Chr1:90714655-90714674 MsG0180005352.01.T01:intron 35.0%
!! TTTTTAGTCAGTGGGATAGA+AGG + Chr1:90712654-90712673 MsG0180005352.01.T01:intron 35.0%
!!! ATGGTTTTGGATAAAGAGGA+AGG - Chr1:90715795-90715814 None:intergenic 35.0%
!!! GACTCTAGTTTTTTCTCTGT+AGG - Chr1:90710451-90710470 None:intergenic 35.0%
!!! GACTTTTTTATCTGCGTATG+AGG + Chr1:90711508-90711527 MsG0180005352.01.T01:intron 35.0%
!!! TGGGATAGTTTTTAGTCAGT+GGG + Chr1:90712646-90712665 MsG0180005352.01.T01:intron 35.0%
!!! TTTTTTAGTTCCCCCAAATG+AGG + Chr1:90713774-90713793 MsG0180005352.01.T01:intron 35.0%
!!! TTTTTTGTCAAGTAGCCTAG+TGG + Chr1:90709809-90709828 MsG0180005352.01.T01:intron 35.0%
AAAGATCCATCATAAGTGGG+GGG - Chr1:90712464-90712483 None:intergenic 40.0%
AAATAGAGGACATTGGAAGG+AGG - Chr1:90713830-90713849 None:intergenic 40.0%
AAATGAACACCGCAAGAAGA+CGG + Chr1:90710229-90710248 MsG0180005352.01.T01:intron 40.0%
AAGACTAAGCACAAAAGTGG+GGG - Chr1:90715712-90715731 None:intergenic 40.0%
AAGATCCCGTTTGGTATCTT+GGG - Chr1:90716159-90716178 None:intergenic 40.0%
AATAGAGGACATTGGAAGGA+GGG - Chr1:90713829-90713848 None:intergenic 40.0%
ACCAACTAAGCATATGCTCA+CGG + Chr1:90709914-90709933 MsG0180005352.01.T01:intron 40.0%
ACTATCCATGAAGTGTACCA+AGG + Chr1:90708702-90708721 MsG0180005352.01.T01:CDS 40.0%
ACTGAAAGCTGAAGAACCAT+CGG + Chr1:90716028-90716047 MsG0180005352.01.T01:CDS 40.0%
ACTTCTCTTTATCTCTGTGC+AGG + Chr1:90713144-90713163 MsG0180005352.01.T01:CDS 40.0%
ACTTTGTAAAGCTGTCCTGA+CGG - Chr1:90712410-90712429 None:intergenic 40.0%
AGACCCACTAATAGCTTGAA+AGG + Chr1:90715226-90715245 MsG0180005352.01.T01:intron 40.0%
AGCAAACTTGACTGCTACTA+AGG - Chr1:90713919-90713938 None:intergenic 40.0%
AGCAGGAGGATACTTATCTA+TGG + Chr1:90715506-90715525 MsG0180005352.01.T01:intron 40.0%
ATAAAACCCTCCTCATTTGG+GGG - Chr1:90713787-90713806 None:intergenic 40.0%
ATAAGTATGGGATCTGCGTT+TGG - Chr1:90714556-90714575 None:intergenic 40.0%
ATCCTTCTCGTGTTCTTCAA+TGG - Chr1:90716859-90716878 None:intergenic 40.0%
ATCTCATCATTATGGGGTCT+AGG - Chr1:90715656-90715675 None:intergenic 40.0%
ATGGCAAAGATGGACAATTG+CGG + Chr1:90708519-90708538 MsG0180005352.01.T01:CDS 40.0%
ATTAGCTACGCGATTCTTAC+CGG - Chr1:90711938-90711957 None:intergenic 40.0%
ATTCAAAGTAACACTGCTGG+AGG + Chr1:90716206-90716225 MsG0180005352.01.T01:intron 40.0%
ATTGATGCAAAGTATGCAGC+TGG + Chr1:90716289-90716308 MsG0180005352.01.T01:intron 40.0%
ATTGTATGAGCAGTACAAGG+AGG - Chr1:90709529-90709548 None:intergenic 40.0%
ATTTCTGCAAGCATGAGACA+TGG - Chr1:90714295-90714314 None:intergenic 40.0%
CAACCTTGTACCCTTTGATT+TGG + Chr1:90712900-90712919 MsG0180005352.01.T01:CDS 40.0%
CAATTCAAAGGCTACGTACA+AGG + Chr1:90713040-90713059 MsG0180005352.01.T01:intron 40.0%
CACTCGATTGACATAAAGGA+AGG - Chr1:90711735-90711754 None:intergenic 40.0%
CATATACAAACTCTACCAGC+CGG + Chr1:90711991-90712010 MsG0180005352.01.T01:intron 40.0%
CCAATTTCTTCATTGAAGGG+TGG - Chr1:90710419-90710438 None:intergenic 40.0%
CCACCCTTCAATGAAGAAAT+TGG + Chr1:90710416-90710435 MsG0180005352.01.T01:intron 40.0%
CCTCTTCTGTATTATGAAGC+AGG - Chr1:90712793-90712812 None:intergenic 40.0%
CCTGCTTCATAATACAGAAG+AGG + Chr1:90712790-90712809 MsG0180005352.01.T01:intron 40.0%
CGAAGTTCATAACAGAACCT+AGG + Chr1:90717137-90717156 MsG0180005352.01.T01:three_prime_UTR 40.0%
CGGCATCCATTGTAAAAATC+AGG + Chr1:90713301-90713320 MsG0180005352.01.T01:CDS 40.0%
CTCCGATTATTCCAAACATG+AGG - Chr1:90715488-90715507 None:intergenic 40.0%
CTCTACCAAAAGATCTAAGG+GGG + Chr1:90716238-90716257 MsG0180005352.01.T01:intron 40.0%
CTGAATTCGATTGGGATCAA+TGG + Chr1:90716077-90716096 MsG0180005352.01.T01:CDS 40.0%
CTTGTACGTAGCCTTTGAAT+TGG - Chr1:90713042-90713061 None:intergenic 40.0%
CTTTAATCGTTATGCTGGTC+AGG - Chr1:90709204-90709223 None:intergenic 40.0%
GAAACCAAGTTTCACCAACT+TGG - Chr1:90709258-90709277 None:intergenic 40.0%
GATGAACTCACGTCAAATGT+TGG + Chr1:90715975-90715994 MsG0180005352.01.T01:CDS 40.0%
GCAATTGTATGAGCAGTACA+AGG - Chr1:90709532-90709551 None:intergenic 40.0%
GCACTGGAAGATATTCCTAT+TGG + Chr1:90714963-90714982 MsG0180005352.01.T01:CDS 40.0%
GCAGGAGGATACTTATCTAT+GGG + Chr1:90715507-90715526 MsG0180005352.01.T01:intron 40.0%
GCTAGGATCTCATCATTATG+GGG - Chr1:90715662-90715681 None:intergenic 40.0%
GCTGGTAGAGTTTGTATATG+TGG - Chr1:90711991-90712010 None:intergenic 40.0%
GCTTCTTGAATTGTCCAAGT+TGG + Chr1:90709241-90709260 MsG0180005352.01.T01:intron 40.0%
GTCTACTAGGTAGCATAACA+TGG - Chr1:90717320-90717339 None:intergenic 40.0%
GTGAGGGATCTAAATTCCAA+TGG - Chr1:90713017-90713036 None:intergenic 40.0%
GTGCTAGGATCTCATCATTA+TGG - Chr1:90715664-90715683 None:intergenic 40.0%
GTGCTTCCTTTGATGCTAAA+AGG - Chr1:90716315-90716334 None:intergenic 40.0%
GTGGAAGAAATAGAGGACAT+TGG - Chr1:90713837-90713856 None:intergenic 40.0%
TATGCCAGTTCAGTTCCAAT+AGG - Chr1:90714981-90715000 None:intergenic 40.0%
TCCATCGATGCAACTAGAAA+AGG + Chr1:90714710-90714729 MsG0180005352.01.T01:CDS 40.0%
TCGATTGAGACAGAGAGTAA+AGG + Chr1:90711778-90711797 MsG0180005352.01.T01:intron 40.0%
TCTACCAAAAGATCTAAGGG+GGG + Chr1:90716239-90716258 MsG0180005352.01.T01:intron 40.0%
TGAATTAATCTCCCAGCTAG+TGG + Chr1:90712053-90712072 MsG0180005352.01.T01:intron 40.0%
TGACAGATGATGTGTGCATT+TGG - Chr1:90716578-90716597 None:intergenic 40.0%
TGAGCATATGCTTAGTTGGT+AGG - Chr1:90709914-90709933 None:intergenic 40.0%
TGCATAGCCCATAAGAATGA+TGG - Chr1:90712438-90712457 None:intergenic 40.0%
TGTACAGAGTGAACAATCCA+TGG + Chr1:90715998-90716017 MsG0180005352.01.T01:CDS 40.0%
TGTACTCCCAAGATACCAAA+CGG + Chr1:90716150-90716169 MsG0180005352.01.T01:CDS 40.0%
TGTCGTAGATACACTGTCTT+GGG - Chr1:90716883-90716902 None:intergenic 40.0%
TTCAACCGCTGAATTCGATT+GGG + Chr1:90716069-90716088 MsG0180005352.01.T01:CDS 40.0%
TTCCTACCCTCCAAATCAAA+GGG - Chr1:90712913-90712932 None:intergenic 40.0%
TTGAAGTGGTTTACCAGGAA+TGG - Chr1:90714757-90714776 None:intergenic 40.0%
TTGATCCCAATCGAATTCAG+CGG - Chr1:90716077-90716096 None:intergenic 40.0%
TTTCCTACCCTCCAAATCAA+AGG - Chr1:90712914-90712933 None:intergenic 40.0%
TTTCTGCAAGCATGAGACAT+GGG - Chr1:90714294-90714313 None:intergenic 40.0%
TTTGGCTGATGAGGAAATCA+AGG + Chr1:90714376-90714395 MsG0180005352.01.T01:CDS 40.0%
! AAAAACTAGAGTCGGCTTCT+TGG + Chr1:90710458-90710477 MsG0180005352.01.T01:intron 40.0%
! AAGTGAGTAAGTTGGGTGTT+CGG + Chr1:90709850-90709869 MsG0180005352.01.T01:intron 40.0%
! ATGTTTGGAATAATCGGAGC+AGG + Chr1:90715489-90715508 MsG0180005352.01.T01:intron 40.0%
! ATTGTATTGGAGGAGGGTTT+TGG - Chr1:90713755-90713774 None:intergenic 40.0%
! CAAATCAAAGGGTACAAGGT+TGG - Chr1:90712902-90712921 None:intergenic 40.0%
! CAATTTTCGCTAACAAGCCA+AGG + Chr1:90709080-90709099 MsG0180005352.01.T01:intron 40.0%
! CTTCATTGAAGGGTGGTTTT+GGG - Chr1:90710412-90710431 None:intergenic 40.0%
! CTTTGTTTGCAAGTTTGGAG+GGG - Chr1:90713896-90713915 None:intergenic 40.0%
! GAGCATATGCTTAGTTGGTA+GGG - Chr1:90709913-90709932 None:intergenic 40.0%
! GGATTTGTTTATCAGGTCCT+AGG - Chr1:90717157-90717176 None:intergenic 40.0%
! TATGGGAAGATGATGATGAC+AGG + Chr1:90715524-90715543 MsG0180005352.01.T01:CDS 40.0%
! TCTTCATTGAAGGGTGGTTT+TGG - Chr1:90710413-90710432 None:intergenic 40.0%
! TGTTGCTTGTACTCCTCAAA+AGG + Chr1:90716980-90716999 MsG0180005352.01.T01:CDS 40.0%
! TTGTATTGGAGGAGGGTTTT+GGG - Chr1:90713754-90713773 None:intergenic 40.0%
! TTTAAAACAGTGGACTCCGA+TGG - Chr1:90716047-90716066 None:intergenic 40.0%
! TTTAGCATCAAAGGAAGCAC+AGG + Chr1:90716315-90716334 MsG0180005352.01.T01:CDS 40.0%
! TTTTACAATGGATGCCGCTA+GGG - Chr1:90713298-90713317 None:intergenic 40.0%
! TTTTTACAATGGATGCCGCT+AGG - Chr1:90713299-90713318 None:intergenic 40.0%
! TTTTTGTGCAAGATCCCGTT+TGG - Chr1:90716168-90716187 None:intergenic 40.0%
!! CTTGTACCCTTTGATTTGGA+GGG + Chr1:90712904-90712923 MsG0180005352.01.T01:CDS 40.0%
!! GCTTTGTTTGCAAGTTTGGA+GGG - Chr1:90713897-90713916 None:intergenic 40.0%
!! TTAGGCTTTGTTTGGGAGTT+TGG + Chr1:90713555-90713574 MsG0180005352.01.T01:intron 40.0%
!! TTGTCCAAGTTGGTGAAACT+TGG + Chr1:90709251-90709270 MsG0180005352.01.T01:intron 40.0%
!! TTTGATTTGGAGGGTAGGAA+AGG + Chr1:90712913-90712932 MsG0180005352.01.T01:CDS 40.0%
!!! GTGGGATAGTTTTTAGTCAG+TGG + Chr1:90712645-90712664 MsG0180005352.01.T01:intron 40.0%
!!! TCCTTTTCTAGTTGCATCGA+TGG - Chr1:90714714-90714733 None:intergenic 40.0%
AAAAGGCGAATCTAGCCACT+AGG - Chr1:90709827-90709846 None:intergenic 45.0%
AAATCAGGTGAGTTCGTGCT+TGG + Chr1:90713316-90713335 MsG0180005352.01.T01:intron 45.0%
AAATTGATATATCCGCCGGC+TGG - Chr1:90712009-90712028 None:intergenic 45.0%
AACAGGTCTTCGGAGTCTTT+CGG + Chr1:90709290-90709309 MsG0180005352.01.T01:intron 45.0%
AACTCTTCTTGCGTTTGCGT+TGG - Chr1:90710799-90710818 None:intergenic 45.0%
AAGCTTGCAGAAGCGAGAAA+AGG - Chr1:90710904-90710923 None:intergenic 45.0%
AATCAGGTGAGTTCGTGCTT+GGG + Chr1:90713317-90713336 MsG0180005352.01.T01:intron 45.0%
ACAATGGTATACCAGCCCAT+TGG + Chr1:90712998-90713017 MsG0180005352.01.T01:intron 45.0%
ACCACTGAATCCCTTGCTTT+CGG - Chr1:90711582-90711601 None:intergenic 45.0%
AGAAGCGAGAAAAGGGGTTT+GGG - Chr1:90710896-90710915 None:intergenic 45.0%
AGATGAAGAGGGGTGATTTC+AGG + Chr1:90710375-90710394 MsG0180005352.01.T01:intron 45.0%
AGCACTTGCAGTTTGTCAAC+TGG + Chr1:90717341-90717360 MsG0180005352.01.T01:three_prime_UTR 45.0%
AGCTTGCAGAAGCGAGAAAA+GGG - Chr1:90710903-90710922 None:intergenic 45.0%
AGGTGGAGTGTGGAGTATAA+TGG + Chr1:90712933-90712952 MsG0180005352.01.T01:CDS 45.0%
AGTAGCAGAGAAGTGGATAC+AGG + Chr1:90716902-90716921 MsG0180005352.01.T01:CDS 45.0%
AGTTGACAAACTGCAAGTGC+TGG - Chr1:90717342-90717361 None:intergenic 45.0%
ATAGAGGACATTGGAAGGAG+GGG - Chr1:90713828-90713847 None:intergenic 45.0%
ATCATTATGGGGTCTAGGAG+TGG - Chr1:90715651-90715670 None:intergenic 45.0%
ATCCCTCACCACCAATTCAA+AGG + Chr1:90713028-90713047 MsG0180005352.01.T01:intron 45.0%
ATGTCAAACCTTTGGGCAGT+GGG - Chr1:90714857-90714876 None:intergenic 45.0%
CAAGATCCCGTTTGGTATCT+TGG - Chr1:90716160-90716179 None:intergenic 45.0%
CACTCGGTAGCATTACTAAC+TGG + Chr1:90711273-90711292 MsG0180005352.01.T01:intron 45.0%
CAGGCACTCGATTGACATAA+AGG - Chr1:90711739-90711758 None:intergenic 45.0%
CATCCTACTTCTTGCCTTGT+GGG + Chr1:90712627-90712646 MsG0180005352.01.T01:intron 45.0%
CGCATTCAAAGTAACACTGC+TGG + Chr1:90716203-90716222 MsG0180005352.01.T01:intron 45.0%
CTGCTCTTCTTCCTCATGTT+TGG + Chr1:90715474-90715493 MsG0180005352.01.T01:intron 45.0%
CTGTCGTAGATACACTGTCT+TGG - Chr1:90716884-90716903 None:intergenic 45.0%
GAAAATTATTGGACCGGACC+TGG - Chr1:90711450-90711469 None:intergenic 45.0%
GCTTTAACCTGTGTCTCTGA+AGG + Chr1:90713435-90713454 MsG0180005352.01.T01:intron 45.0%
GGATCTAAATTCCAATGGGC+TGG - Chr1:90713012-90713031 None:intergenic 45.0%
GTACGTAGCCTTTGAATTGG+TGG - Chr1:90713039-90713058 None:intergenic 45.0%
GTACTCCCAAGATACCAAAC+GGG + Chr1:90716151-90716170 MsG0180005352.01.T01:CDS 45.0%
GTCATGGGGGAAATAAGAGT+TGG + Chr1:90714933-90714952 MsG0180005352.01.T01:CDS 45.0%
GTGCACTAGGTAGCATAACA+TGG - Chr1:90717202-90717221 None:intergenic 45.0%
GTTCAACCGCTGAATTCGAT+TGG + Chr1:90716068-90716087 MsG0180005352.01.T01:CDS 45.0%
TATCCCACAAGGCAAGAAGT+AGG - Chr1:90712633-90712652 None:intergenic 45.0%
TCATCCTACTTCTTGCCTTG+TGG + Chr1:90712626-90712645 MsG0180005352.01.T01:intron 45.0%
TCATTATGGGGTCTAGGAGT+GGG - Chr1:90715650-90715669 None:intergenic 45.0%
TCCGTGAGCATATGCTTAGT+TGG - Chr1:90709918-90709937 None:intergenic 45.0%
TCCTCCGCAGAGTCATATAA+AGG - Chr1:90715957-90715976 None:intergenic 45.0%
TCCTTTATATGACTCTGCGG+AGG + Chr1:90715953-90715972 MsG0180005352.01.T01:CDS 45.0%
TCGATTGGGATCAATGGCTT+AGG + Chr1:90716083-90716102 MsG0180005352.01.T01:CDS 45.0%
TCTCTCTTATGGTAGGTTCC+AGG + Chr1:90711429-90711448 MsG0180005352.01.T01:intron 45.0%
TGCCATTGAAGAACACGAGA+AGG + Chr1:90716854-90716873 MsG0180005352.01.T01:CDS 45.0%
TTAGTTCCCCCAAATGAGGA+GGG + Chr1:90713778-90713797 MsG0180005352.01.T01:intron 45.0%
TTCCTGCCTAAAACTCAAGG+CGG + Chr1:90716926-90716945 MsG0180005352.01.T01:CDS 45.0%
TTCCTTGGAGCAAAATCTCG+TGG + Chr1:90715071-90715090 MsG0180005352.01.T01:CDS 45.0%
TTCTCGTGTTCTTCAATGGC+AGG - Chr1:90716855-90716874 None:intergenic 45.0%
! AACAAATACAAGCACTGCGC+AGG - Chr1:90712256-90712275 None:intergenic 45.0%
! AACCACGAGATTTTGCTCCA+AGG - Chr1:90715076-90715095 None:intergenic 45.0%
! AATTTTCCATTCCTCTGGCC+TGG - Chr1:90713067-90713086 None:intergenic 45.0%
! ACTAGATAACTTGTGGCAGC+GGG - Chr1:90712765-90712784 None:intergenic 45.0%
! AGTGAGTAAGTTGGGTGTTC+GGG + Chr1:90709851-90709870 MsG0180005352.01.T01:intron 45.0%
! ATCTGGAGGCATGGATATTC+CGG - Chr1:90710154-90710173 None:intergenic 45.0%
! CAAACTCCGCCTTGAGTTTT+AGG - Chr1:90716935-90716954 None:intergenic 45.0%
! CACTAGATAACTTGTGGCAG+CGG - Chr1:90712766-90712785 None:intergenic 45.0%
! CCTCCAAATCAAAGGGTACA+AGG - Chr1:90712906-90712925 None:intergenic 45.0%
! CGACTTCAGTACCTTTTGCT+TGG - Chr1:90717013-90717032 None:intergenic 45.0%
! CTTTCCCCCCTTAGATCTTT+TGG - Chr1:90716246-90716265 None:intergenic 45.0%
! CTTTGTTTGGGAGTTTGGAG+GGG + Chr1:90713560-90713579 MsG0180005352.01.T01:intron 45.0%
! GATTCAGTGGTCTTACCCTT+GGG + Chr1:90711591-90711610 MsG0180005352.01.T01:intron 45.0%
! GCTAGTTCTTCTCCCAATCT+CGG - Chr1:90711828-90711847 None:intergenic 45.0%
! TAGCTTGAAAGGTGATGGCT+AGG + Chr1:90715237-90715256 MsG0180005352.01.T01:intron 45.0%
! TGAATGGTTTGGAGGTGCAA+AGG + Chr1:90715013-90715032 MsG0180005352.01.T01:CDS 45.0%
! TGTATTGGAGGAGGGTTTTG+GGG - Chr1:90713753-90713772 None:intergenic 45.0%
! TTCAGTACCTTTTGCTTGGC+CGG - Chr1:90717009-90717028 None:intergenic 45.0%
! TTTAGTTCCCCCAAATGAGG+AGG + Chr1:90713777-90713796 MsG0180005352.01.T01:intron 45.0%
! TTTGGAATAATCGGAGCAGG+AGG + Chr1:90715492-90715511 MsG0180005352.01.T01:intron 45.0%
!! AGCCTTTGAATTGGTGGTGA+GGG - Chr1:90713033-90713052 None:intergenic 45.0%
!! CCTTGTACCCTTTGATTTGG+AGG + Chr1:90712903-90712922 MsG0180005352.01.T01:CDS 45.0%
!! GCTTTGTTTGGGAGTTTGGA+GGG + Chr1:90713559-90713578 MsG0180005352.01.T01:intron 45.0%
!! GGAAGGCACTAGATAACTTG+TGG - Chr1:90712772-90712791 None:intergenic 45.0%
!! GGCTTTGTTTGCAAGTTTGG+AGG - Chr1:90713898-90713917 None:intergenic 45.0%
!! TACCCTTTGATTTGGAGGGT+AGG + Chr1:90712908-90712927 MsG0180005352.01.T01:CDS 45.0%
!! TAGCCTTTGAATTGGTGGTG+AGG - Chr1:90713034-90713053 None:intergenic 45.0%
!! TGGGCTGGTATACCATTGTT+TGG - Chr1:90712997-90713016 None:intergenic 45.0%
!!! AGCTGGCCTTTTAGCATCAA+AGG + Chr1:90716306-90716325 MsG0180005352.01.T01:intron 45.0%
!!! TATTATTATTATTATTTTGA+AGG + Chr1:90711065-90711084 MsG0180005352.01.T01:intron 5.0%
AAACGGCTGAGTCCGAGATT+GGG + Chr1:90711813-90711832 MsG0180005352.01.T01:intron 50.0%
AAAGGCTACGTACAAGGACC+AGG + Chr1:90713046-90713065 MsG0180005352.01.T01:intron 50.0%
AACATTTGAGCGCACCACAG+AGG - Chr1:90715046-90715065 None:intergenic 50.0%
AAGCGAGAAAAGGGGTTTGG+GGG - Chr1:90710894-90710913 None:intergenic 50.0%
ACAAGTGCCTTCAGAGACAC+AGG - Chr1:90713445-90713464 None:intergenic 50.0%
ACCTTTGGGCAGTGGGAAAT+AGG - Chr1:90714850-90714869 None:intergenic 50.0%
ACTCTCTGTCTCAATCGAGC+CGG - Chr1:90711776-90711795 None:intergenic 50.0%
AGAAGAGAACCTACAAGGGC+CGG - Chr1:90711617-90711636 None:intergenic 50.0%
AGCACTGCGCAGGATTGATT+TGG - Chr1:90712246-90712265 None:intergenic 50.0%
AGTAGGTGACACAACAACCC+TGG + Chr1:90708452-90708471 MsG0180005352.01.T01:CDS 50.0%
ATACAAACTCTACCAGCCGG+CGG + Chr1:90711994-90712013 MsG0180005352.01.T01:intron 50.0%
ATACTCTTGCGAAGACCGTC+AGG + Chr1:90712392-90712411 MsG0180005352.01.T01:intron 50.0%
ATTGTTATATGCAGGGGCCG+GGG - Chr1:90709884-90709903 None:intergenic 50.0%
CAAGCACAAGTTTCCGTGCT+AGG - Chr1:90715679-90715698 None:intergenic 50.0%
CAAGTTTGGAGGGGAAGGAA+AGG - Chr1:90713887-90713906 None:intergenic 50.0%
CAGAAGCGAGAAAAGGGGTT+TGG - Chr1:90710897-90710916 None:intergenic 50.0%
CAGGCATAAGAAGCAGAAGG+AGG + Chr1:90713163-90713182 MsG0180005352.01.T01:CDS 50.0%
CATTATGGGGTCTAGGAGTG+GGG - Chr1:90715649-90715668 None:intergenic 50.0%
CATTGTTATATGCAGGGGCC+GGG - Chr1:90709885-90709904 None:intergenic 50.0%
CGTTGGAACTGTAGTGGTAG+CGG - Chr1:90710782-90710801 None:intergenic 50.0%
CGTTTGCGTTGGAACTGTAG+TGG - Chr1:90710788-90710807 None:intergenic 50.0%
CTACGACAGTAGCAGAGAAG+TGG + Chr1:90716895-90716914 MsG0180005352.01.T01:CDS 50.0%
CTGACAGTGCATGTGGAGAT+GGG + Chr1:90713228-90713247 MsG0180005352.01.T01:CDS 50.0%
CTTATGGTAGGTTCCAGGTC+CGG + Chr1:90711434-90711453 MsG0180005352.01.T01:intron 50.0%
GAAGCGAGAAAAGGGGTTTG+GGG - Chr1:90710895-90710914 None:intergenic 50.0%
GATGATCCTGACAGTGCATG+TGG + Chr1:90713221-90713240 MsG0180005352.01.T01:CDS 50.0%
GATGTCAAACCTTTGGGCAG+TGG - Chr1:90714858-90714877 None:intergenic 50.0%
GATTTGGAGGGTAGGAAAGG+TGG + Chr1:90712916-90712935 MsG0180005352.01.T01:CDS 50.0%
GCATAAGAAGCAGAAGGAGG+AGG + Chr1:90713166-90713185 MsG0180005352.01.T01:CDS 50.0%
GCATTGTTATATGCAGGGGC+CGG - Chr1:90709886-90709905 None:intergenic 50.0%
GCATTTCCCCCCACTTATGA+TGG + Chr1:90712455-90712474 MsG0180005352.01.T01:intron 50.0%
GCCTGACTTCTCTATCTGAC+CGG + Chr1:90711754-90711773 MsG0180005352.01.T01:intron 50.0%
GCTTGCAGAAGCGAGAAAAG+GGG - Chr1:90710902-90710921 None:intergenic 50.0%
GGAGGGGGAGAGAAATATAG+GGG + Chr1:90713581-90713600 MsG0180005352.01.T01:intron 50.0%
GGCAAATCTTCAGCAGCATG+AGG - Chr1:90711093-90711112 None:intergenic 50.0%
GGCTTCCTGCCTAAAACTCA+AGG + Chr1:90716923-90716942 MsG0180005352.01.T01:CDS 50.0%
GGGAGGGGGAGAGAAATATA+GGG + Chr1:90713580-90713599 MsG0180005352.01.T01:intron 50.0%
GGGATCTTTACCTAACGACG+CGG - Chr1:90711870-90711889 None:intergenic 50.0%
GTGCAGGCATAAGAAGCAGA+AGG + Chr1:90713160-90713179 MsG0180005352.01.T01:CDS 50.0%
GTTTGCAAGTTTGGAGGGGA+AGG - Chr1:90713892-90713911 None:intergenic 50.0%
TAAAACTGAAGGCCGAGGGT+GGG + Chr1:90714349-90714368 MsG0180005352.01.T01:CDS 50.0%
TAAACGGCTGAGTCCGAGAT+TGG + Chr1:90711812-90711831 MsG0180005352.01.T01:intron 50.0%
TCCTATTTCCCACTGCCCAA+AGG + Chr1:90714846-90714865 MsG0180005352.01.T01:intron 50.0%
TTAAAACTGAAGGCCGAGGG+TGG + Chr1:90714348-90714367 MsG0180005352.01.T01:CDS 50.0%
TTGGAGGGGAAGGAAAGGAA+AGG - Chr1:90713882-90713901 None:intergenic 50.0%
TTTGGGCAGTGGGAAATAGG+AGG - Chr1:90714847-90714866 None:intergenic 50.0%
! AAAGGCGCGAATCGGCTAAA+CGG + Chr1:90711796-90711815 MsG0180005352.01.T01:intron 50.0%
! AGCATCAAAGGAAGCACAGG+AGG + Chr1:90716318-90716337 MsG0180005352.01.T01:CDS 50.0%
! ATTTTGGATGCGAGGCGGAT+GGG - Chr1:90712193-90712212 None:intergenic 50.0%
! CAGAGAGTAAAGGCGCGAAT+CGG + Chr1:90711788-90711807 MsG0180005352.01.T01:intron 50.0%
! GGATTCAGTGGTCTTACCCT+TGG + Chr1:90711590-90711609 MsG0180005352.01.T01:intron 50.0%
! GTGAGTAAGTTGGGTGTTCG+GGG + Chr1:90709852-90709871 MsG0180005352.01.T01:intron 50.0%
! GTTGGTGAAAAAGGGAAGCG+AGG + Chr1:90710750-90710769 MsG0180005352.01.T01:intron 50.0%
! TAGAGTCGGCTTCTTGGAGA+GGG + Chr1:90710464-90710483 MsG0180005352.01.T01:intron 50.0%
! TCAGTACCTTTTGCTTGGCC+GGG - Chr1:90717008-90717027 None:intergenic 50.0%
!! ACTGCAAGTGCTGGTCTACT+AGG - Chr1:90717333-90717352 None:intergenic 50.0%
!! AGAGTTAGTGCTGGTGCACT+AGG - Chr1:90717215-90717234 None:intergenic 50.0%
!! GGCTTTGTTTGGGAGTTTGG+AGG + Chr1:90713558-90713577 MsG0180005352.01.T01:intron 50.0%
!! GTATTGGAGGAGGGTTTTGG+GGG - Chr1:90713752-90713771 None:intergenic 50.0%
!! TATTTTGGATGCGAGGCGGA+TGG - Chr1:90712194-90712213 None:intergenic 50.0%
!! TGTACTCCTCAAAAGGCACC+CGG + Chr1:90716987-90717006 MsG0180005352.01.T01:CDS 50.0%
!!! TATTGGAGGAGGGTTTTGGG+GGG - Chr1:90713751-90713770 None:intergenic 50.0%
AAAACTGAAGGCCGAGGGTG+GGG + Chr1:90714350-90714369 MsG0180005352.01.T01:CDS 55.0%
ACGTTGCAGATCTGGAGGCA+TGG - Chr1:90710163-90710182 None:intergenic 55.0%
AGCGAGAAAAGGGGTTTGGG+GGG - Chr1:90710893-90710912 None:intergenic 55.0%
AGGGTAGGAAAGGTGGAGTG+TGG + Chr1:90712923-90712942 MsG0180005352.01.T01:CDS 55.0%
AGGTCTTCGGAGTCTTTCGG+TGG + Chr1:90709293-90709312 MsG0180005352.01.T01:intron 55.0%
ATGCCGCTAGGGCAAAATCC+AGG - Chr1:90713287-90713306 None:intergenic 55.0%
CCATCTCCACATGCACTGTC+AGG - Chr1:90713230-90713249 None:intergenic 55.0%
CCTGACAGTGCATGTGGAGA+TGG + Chr1:90713227-90713246 MsG0180005352.01.T01:CDS 55.0%
CGTCAACGTTGCAGATCTGG+AGG - Chr1:90710168-90710187 None:intergenic 55.0%
CTAACGACGCGGAGCGAATT+CGG - Chr1:90711859-90711878 None:intergenic 55.0%
GCCGAAAGCAAGGGATTCAG+TGG + Chr1:90711578-90711597 MsG0180005352.01.T01:intron 55.0%
GCCGGTCAGATAGAGAAGTC+AGG - Chr1:90711758-90711777 None:intergenic 55.0%
GGGGAAGGAAAGGAAAGGCT+TGG - Chr1:90713877-90713896 None:intergenic 55.0%
GGGGAGGGGGAGAGAAATAT+AGG + Chr1:90713579-90713598 MsG0180005352.01.T01:intron 55.0%
GTGGTCGCCCAGTATGACAT+AGG - Chr1:90711972-90711991 None:intergenic 55.0%
GTTTGGGAGTTTGGAGGGGA+GGG + Chr1:90713564-90713583 MsG0180005352.01.T01:intron 55.0%
TCTGGCATAGTGGCATGCCT+TGG - Chr1:90709100-90709119 None:intergenic 55.0%
TGCCGCTAGGGCAAAATCCA+GGG - Chr1:90713286-90713305 None:intergenic 55.0%
TGTTTGGGAGTTTGGAGGGG+AGG + Chr1:90713563-90713582 MsG0180005352.01.T01:intron 55.0%
TTTGGGAGTTTGGAGGGGAG+GGG + Chr1:90713565-90713584 MsG0180005352.01.T01:intron 55.0%
! ACCCCTGGATTTTGCCCTAG+CGG + Chr1:90713281-90713300 MsG0180005352.01.T01:CDS 55.0%
! CTAGAGTCGGCTTCTTGGAG+AGG + Chr1:90710463-90710482 MsG0180005352.01.T01:intron 55.0%
! CTGTCTCTGTTGCTGCTTCC+CGG + Chr1:90711680-90711699 MsG0180005352.01.T01:intron 55.0%
! GGATGGGCAAGATCTGAAGC+TGG - Chr1:90712177-90712196 None:intergenic 55.0%
! TGTTGGTGGGCCGAAAGCAA+GGG + Chr1:90711569-90711588 MsG0180005352.01.T01:intron 55.0%
! TTGTTGGTGGGCCGAAAGCA+AGG + Chr1:90711568-90711587 MsG0180005352.01.T01:intron 55.0%
!! GTGGGGTCTTTTGGCTGATG+AGG + Chr1:90714367-90714386 MsG0180005352.01.T01:CDS 55.0%
!!! AGGAGGGTTTTGGGGGGTTT+GGG - Chr1:90713745-90713764 None:intergenic 55.0%
!!! CTCCGCCTTGAGTTTTAGGC+AGG - Chr1:90716931-90716950 None:intergenic 55.0%
ACGTACAAGGACCAGGCCAG+AGG + Chr1:90713053-90713072 MsG0180005352.01.T01:intron 60.0%
ATGGGGTCTAGGAGTGGGGA+AGG - Chr1:90715645-90715664 None:intergenic 60.0%
CAAGGACCAGGCCAGAGGAA+TGG + Chr1:90713058-90713077 MsG0180005352.01.T01:intron 60.0%
CAGCCAAAAGACCCCACCCT+CGG - Chr1:90714364-90714383 None:intergenic 60.0%
CGAATTCGCTCCGCGTCGTT+AGG + Chr1:90711857-90711876 MsG0180005352.01.T01:intron 60.0%
GCAAAGGTTCGCTGCCTCTG+TGG + Chr1:90715029-90715048 MsG0180005352.01.T01:CDS 60.0%
GCCGCTAGGGCAAAATCCAG+GGG - Chr1:90713285-90713304 None:intergenic 60.0%
GGGCGTCAACGTTGCAGATC+TGG - Chr1:90710171-90710190 None:intergenic 60.0%
TTGGGAGTTTGGAGGGGAGG+GGG + Chr1:90713566-90713585 MsG0180005352.01.T01:intron 60.0%
! AAGGCACCCGGCCAAGCAAA+AGG + Chr1:90716999-90717018 MsG0180005352.01.T01:CDS 60.0%
! ACCAGCACTGAATGCACCCC+TGG + Chr1:90713266-90713285 MsG0180005352.01.T01:CDS 60.0%
! CAGTGGTCTTACCCTTGGGC+CGG + Chr1:90711595-90711614 MsG0180005352.01.T01:intron 60.0%
! TCCAGGGGTGCATTCAGTGC+TGG - Chr1:90713270-90713289 None:intergenic 60.0%
!!! AGGGTTTTGGGGGGTTTGGG+AGG - Chr1:90713742-90713761 None:intergenic 60.0%
!!! GAGGAGGGTTTTGGGGGGTT+TGG - Chr1:90713746-90713765 None:intergenic 60.0%
!!! GGGTTTTGGGGGGTTTGGGA+GGG - Chr1:90713741-90713760 None:intergenic 60.0%
AACCTACAAGGGCCGGCCCA+AGG - Chr1:90711610-90711629 None:intergenic 65.0%
ACCTACAAGGGCCGGCCCAA+GGG - Chr1:90711609-90711628 None:intergenic 65.0%
GGTGTTCGGGGTTCGAACCC+CGG + Chr1:90709864-90709883 MsG0180005352.01.T01:intron 65.0%
! AGGCCGAGGGTGGGGTCTTT+TGG + Chr1:90714358-90714377 MsG0180005352.01.T01:CDS 65.0%
! GCTTGGCCGGGTGCCTTTTG+AGG - Chr1:90716996-90717015 None:intergenic 65.0%
ACCCTTGGGCCGGCCCTTGT+AGG + Chr1:90711605-90711624 MsG0180005352.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr1 gene 90708387 90717421 90708387 ID=MsG0180005352.01;Name=MsG0180005352.01
Chr1 mRNA 90708387 90717421 90708387 ID=MsG0180005352.01.T01;Parent=MsG0180005352.01;Name=MsG0180005352.01.T01;_AED=0.15;_eAED=0.16;_QI=0|0.63|0.58|0.91|0.63|0.58|12|336|638
Chr1 exon 90708387 90708788 90708387 ID=MsG0180005352.01.T01:exon:17502;Parent=MsG0180005352.01.T01
Chr1 exon 90711087 90711155 90711087 ID=MsG0180005352.01.T01:exon:17503;Parent=MsG0180005352.01.T01
Chr1 exon 90712892 90713003 90712892 ID=MsG0180005352.01.T01:exon:17504;Parent=MsG0180005352.01.T01
Chr1 exon 90713105 90713322 90713105 ID=MsG0180005352.01.T01:exon:17505;Parent=MsG0180005352.01.T01
Chr1 exon 90714311 90714397 90714311 ID=MsG0180005352.01.T01:exon:17506;Parent=MsG0180005352.01.T01
Chr1 exon 90714501 90714585 90714501 ID=MsG0180005352.01.T01:exon:17507;Parent=MsG0180005352.01.T01
Chr1 exon 90714669 90714762 90714669 ID=MsG0180005352.01.T01:exon:17508;Parent=MsG0180005352.01.T01
Chr1 exon 90714902 90715100 90714902 ID=MsG0180005352.01.T01:exon:17509;Parent=MsG0180005352.01.T01
Chr1 exon 90715511 90715545 90715511 ID=MsG0180005352.01.T01:exon:17510;Parent=MsG0180005352.01.T01
Chr1 exon 90715935 90716212 90715935 ID=MsG0180005352.01.T01:exon:17511;Parent=MsG0180005352.01.T01
Chr1 exon 90716308 90716357 90716308 ID=MsG0180005352.01.T01:exon:17512;Parent=MsG0180005352.01.T01
Chr1 exon 90716798 90717421 90716798 ID=MsG0180005352.01.T01:exon:17513;Parent=MsG0180005352.01.T01
Chr1 CDS 90708387 90708788 90708387 ID=MsG0180005352.01.T01:cds;Parent=MsG0180005352.01.T01
Chr1 CDS 90711087 90711155 90711087 ID=MsG0180005352.01.T01:cds;Parent=MsG0180005352.01.T01
Chr1 CDS 90712892 90713003 90712892 ID=MsG0180005352.01.T01:cds;Parent=MsG0180005352.01.T01
Chr1 CDS 90713105 90713322 90713105 ID=MsG0180005352.01.T01:cds;Parent=MsG0180005352.01.T01
Chr1 CDS 90714311 90714397 90714311 ID=MsG0180005352.01.T01:cds;Parent=MsG0180005352.01.T01
Chr1 CDS 90714501 90714585 90714501 ID=MsG0180005352.01.T01:cds;Parent=MsG0180005352.01.T01
Chr1 CDS 90714669 90714762 90714669 ID=MsG0180005352.01.T01:cds;Parent=MsG0180005352.01.T01
Chr1 CDS 90714902 90715100 90714902 ID=MsG0180005352.01.T01:cds;Parent=MsG0180005352.01.T01
Chr1 CDS 90715511 90715545 90715511 ID=MsG0180005352.01.T01:cds;Parent=MsG0180005352.01.T01
Chr1 CDS 90715935 90716212 90715935 ID=MsG0180005352.01.T01:cds;Parent=MsG0180005352.01.T01
Chr1 CDS 90716308 90716357 90716308 ID=MsG0180005352.01.T01:cds;Parent=MsG0180005352.01.T01
Chr1 CDS 90716798 90717085 90716798 ID=MsG0180005352.01.T01:cds;Parent=MsG0180005352.01.T01
Chr1 three_prime_UTR 90717086 90717421 90717086 ID=MsG0180005352.01.T01:three_prime_utr;Parent=MsG0180005352.01.T01
Gene Sequence

>MsG0180005352.01.T01

ATGAAGGAAAAGCATGGTGAGTTTCTAAAATTGATGAACGATTTCAAGTCTCTAAGAATTGATACAGTAGGTGACACAACAACCCTGGAAGATGTGTATAAAAAGTCGATTATTCAACTTGTTTTAGACAATATGGCAAAGATGGACAATTGCGGTGATGAGTTTTATAAAGCTGTGATGGATCTCATCAATGCTCAAAGAATTGATACAAGAAGTGCAGAAGCAAGACTAGAAGAATATTATAAAGCGTATCAAGGATTAAAATTGGCATTCAACTCCTTGTCAAAGTTATTGCAAGAATATCAAATTCATATCACTATCCATGAAGTGTACCAAGGAATAAGTGAAAGAATTGATAATTATGAGTCCCGGTTTCAACATTTTTTCGACATTTTGGCGAAAGAACCTCATGCTGCTGAAGATTTGCCTCAATACATTCATATCAATCAAAATGATTTTTTTTATGCGAAGTTTAACTCCAACCTTGTACCCTTTGATTTGGAGGGTAGGAAAGGTGGAGTGTGGAGTATAATGGAGTCTATCCAATCGAATTGTATTATATCCTATTTAAATCCAAACAATGCATTCTTGAGATATCTTAATGTTATATTAATGCATTTGCACTTCTCTTTATCTCTGTGCAGGCATAAGAAGCAGAAGGAGGAGGATATTGCTATATGTGAATGCAGGTATGATGAAGATGATCCTGACAGTGCATGTGGAGATGGGTGCCTAAATGTATTAACCAGCACTGAATGCACCCCTGGATTTTGCCCTAGCGGCATCCATTGTAAAAATCAGAAATTTCAGAAGTGTGAATATGCAAAAACAAAGTTATTTAAAACTGAAGGCCGAGGGTGGGGTCTTTTGGCTGATGAGGAAATCAAGGCAGGACAGTTTGTCATTGAATACTGTGGAGAAGTAATATCATGCAAAGAAGCCAAACGCAGATCCCATACTTATGAAATTCAAGGTCTTAAGGATGCATTTATCATTTCTCTTAATGCGTCTGAATCCATCGATGCAACTAGAAAAGGAAGCCTTGCAAGATTTATAAACCATTCCTGTCAACCAAACTGTGAGACAAGAAAATGGAATGTCATGGGGGAAATAAGAGTTGGAATATTTGCACTGGAAGATATTCCTATTGGAACTGAACTGGCATATGACTATAATTTTGAATGGTTTGGAGGTGCAAAGGTTCGCTGCCTCTGTGGTGCGCTCAAATGTTCTGAATTCCTTGGAGCAAAATCTCGTGGTTTTCAAGAGGATACTTATCTATGGGAAGATGATGATGACAGATACTCAATTGAGAAAATTCCTTTATATGACTCTGCGGAGGATGAACTCACGTCAAATGTTGGTGTACAGAGTGAACAATCCATGGCTATTATACTGAAAGCTGAAGAACCATCGGAGTCCACTGTTTTAAATGTTCAACCGCTGAATTCGATTGGGATCAATGGCTTAGGTATTCAGAAAATGAAAACTGAAATAGAAAGCGAGGACATGAAGTTGTACTCCCAAGATACCAAACGGGATCTTGCACAAAAAAATGCAATGATATCGCGCATTCAAACTGGCCTTTTAGCATCAAAGGAAGCACAGGAGGAGATTTTAGATTATGAGAAAAGAAAAGATGACGCTACGGAAGCCCTTGATTCTTTGTACAATGAAATACGGCCTGCCATTGAAGAACACGAGAAGGATACCCAAGACAGTGTATCTACGACAGTAGCAGAGAAGTGGATACAGGCTTCCTGCCTAAAACTCAAGGCGGAGTTTGATCTTTACTCGTCAATTATTAAAAATGTTGCTTGTACTCCTCAAAAGGCACCCGGCCAAGCAAAAGGTACTGAAGTCGATAACGAAGACAAAATGAAGCTTTTGACGTTCTCGGCCTCATCTAATCCGTAA
Protein sequence

>MsG0180005352.01.T01

MKEKHGEFLKLMNDFKSLRIDTVGDTTTLEDVYKKSIIQLVLDNMAKMDNCGDEFYKAVMDLINAQRIDTRSAEARLEEYYKAYQGLKLAFNSLSKLLQEYQIHITIHEVYQGISERIDNYESRFQHFFDILAKEPHAAEDLPQYIHINQNDFFYAKFNSNLVPFDLEGRKGGVWSIMESIQSNCIISYLNPNNAFLRYLNVILMHLHFSLSLCRHKKQKEEDIAICECRYDEDDPDSACGDGCLNVLTSTECTPGFCPSGIHCKNQKFQKCEYAKTKLFKTEGRGWGLLADEEIKAGQFVIEYCGEVISCKEAKRRSHTYEIQGLKDAFIISLNASESIDATRKGSLARFINHSCQPNCETRKWNVMGEIRVGIFALEDIPIGTELAYDYNFEWFGGAKVRCLCGALKCSEFLGAKSRGFQEDTYLWEDDDDRYSIEKIPLYDSAEDELTSNVGVQSEQSMAIILKAEEPSESTVLNVQPLNSIGINGLGIQKMKTEIESEDMKLYSQDTKRDLAQKNAMISRIQTGLLASKEAQEEILDYEKRKDDATEALDSLYNEIRPAIEEHEKDTQDSVSTTVAEKWIQASCLKLKAEFDLYSSIIKNVACTPQKAPGQAKGTEVDNEDKMKLLTFSASSNP*