AlfalfaGEDB | MsG0180005645.01

M. sativa cultivar ZhongmuNo.1 / MsG0180005645.01

KEGG: K11644
GO: GO:0006355
PFAM: PF02671

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180005645.01.T01	RHN82063.1	78.191	188	26	2	13	200	2	174	6.79E-91	279
MsG0180005645.01.T01	RHN82063.1	52.838	229	54	2	99	327	5	179	8.97E-62	205

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180005645.01.T01	Q9XIK6	33.939	165	98	4	1	158	70	230	1.40E-15	81.3

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180005645.01.T01	A0A396K1D1	78.191	188	26	2	13	200	2	174	3.24e-91	279

TFs/TRs:

Gene ID	Type	Classification
MsG0180005645.01.T01	TR	Others

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180005645.01.T01	MTR_1g104980	79.032	186	24	2	15	200	1	171	8.65e-95	279
MsG0180005645.01.T01	MTR_1g104980	52.838	229	54	2	99	327	2	176	9.54e-66	205
MsG0180005645.01.T01	MTR_1g104960	61.081	185	45	2	1	170	1	173	1.07e-66	207
MsG0180005645.01.T01	MTR_1g104960	55.682	176	55	1	104	279	21	173	4.02e-57	183
MsG0180005645.01.T01	MTR_1g104960	51.807	83	40	0	202	284	10	92	1.01e-19	85.5
MsG0180005645.01.T01	MTR_4g133470	40.143	279	130	8	1	277	1	244	1.88e-43	150
MsG0180005645.01.T01	MTR_4g133470	40.331	181	76	6	113	292	26	175	5.11e-22	93.6
MsG0180005645.01.T01	MTR_4g133300	38.849	278	135	6	1	277	1	244	4.32e-43	149
MsG0180005645.01.T01	MTR_4g133300	37.778	180	82	4	113	292	26	175	5.96e-21	90.5
MsG0180005645.01.T01	MTR_1g104940	58.416	101	41	1	99	199	17	116	8.25e-31	113
MsG0180005645.01.T01	MTR_1g104940	51.887	106	50	1	208	313	17	121	1.01e-27	105
MsG0180005645.01.T01	MTR_1g104940	61.250	80	29	1	5	82	4	83	5.46e-25	97.8
MsG0180005645.01.T01	MTR_7g013380	31.271	291	160	7	1	280	1	262	2.36e-30	117
MsG0180005645.01.T01	MTR_7g013380	30.808	198	106	4	100	293	17	187	1.88e-16	79.0
MsG0180005645.01.T01	MTR_1g105955	39.634	164	93	3	2	164	5	163	7.58e-29	110
MsG0180005645.01.T01	MTR_1g105955	33.714	175	86	1	99	273	19	163	2.58e-25	100
MsG0180005645.01.T01	MTR_3g006125	40.828	169	91	3	11	170	87	255	3.66e-27	107
MsG0180005645.01.T01	MTR_3g006125	36.898	187	89	4	99	279	92	255	9.39e-22	92.8
MsG0180005645.01.T01	MTR_3g006185	40.476	168	92	3	11	170	6	173	9.23e-27	104
MsG0180005645.01.T01	MTR_3g006185	36.066	183	95	4	99	279	11	173	1.42e-18	82.4
MsG0180005645.01.T01	MTR_1g104937	59.740	77	31	0	6	82	5	81	3.38e-25	98.2
MsG0180005645.01.T01	MTR_1g104937	55.172	87	38	1	208	294	15	100	7.57e-23	92.0
MsG0180005645.01.T01	MTR_1g104937	52.525	99	39	2	99	190	15	112	1.26e-22	91.3
MsG0180005645.01.T01	MTR_3g006105	40.588	170	83	5	11	167	6	170	2.91e-24	97.8
MsG0180005645.01.T01	MTR_3g006105	36.667	180	92	5	99	276	11	170	9.10e-20	85.9
MsG0180005645.01.T01	MTR_3g006150	38.418	177	81	4	99	274	11	160	1.47e-23	95.1
MsG0180005645.01.T01	MTR_3g006150	42.208	154	75	4	12	158	7	153	9.83e-23	93.2
MsG0180005645.01.T01	MTR_3g006150	42.353	85	45	2	208	292	11	91	1.88e-13	67.8
MsG0180005645.01.T01	MTR_1g104950	60.465	86	25	2	36	117	1	81	5.68e-22	88.6
MsG0180005645.01.T01	MTR_1g104950	42.593	108	35	2	119	226	1	81	6.23e-17	75.1
MsG0180005645.01.T01	MTR_1g104950	47.945	73	36	1	228	298	1	73	3.10e-13	64.7
MsG0180005645.01.T01	MTR_3g006065	39.412	170	87	5	12	172	7	169	9.39e-21	88.6
MsG0180005645.01.T01	MTR_3g006065	36.994	173	82	4	112	281	21	169	5.14e-20	86.7
MsG0180005645.01.T01	MTR_5g036670	35.484	155	89	4	11	158	41	191	1.42e-17	84.3
MsG0180005645.01.T01	MTR_5g036670	29.891	184	103	2	87	267	31	191	3.91e-17	82.8
MsG0180005645.01.T01	MTR_5g036670	35.780	109	65	1	208	311	46	154	4.97e-12	67.4
MsG0180005645.01.T01	MTR_8g062700	35.897	156	87	6	11	158	40	190	9.50e-16	78.6
MsG0180005645.01.T01	MTR_8g062700	33.728	169	89	2	99	267	45	190	9.59e-16	78.6
MsG0180005645.01.T01	MTR_8g062700	50.000	74	36	1	208	281	45	117	3.55e-13	70.9
MsG0180005645.01.T01	MTR_8g062700	35.897	156	87	6	11	158	40	190	9.77e-16	78.6
MsG0180005645.01.T01	MTR_8g062700	33.728	169	89	2	99	267	45	190	1.02e-15	78.6
MsG0180005645.01.T01	MTR_8g062700	50.000	74	36	1	208	281	45	117	3.65e-13	70.9
MsG0180005645.01.T01	MTR_1g105960	44.872	78	43	0	208	285	4	81	1.05e-15	72.4
MsG0180005645.01.T01	MTR_1g105960	44.872	78	43	0	99	176	4	81	4.37e-15	70.9
MsG0180005645.01.T01	MTR_1g105960	37.288	118	51	2	14	131	2	96	2.87e-13	65.9
MsG0180005645.01.T01	MTR_1g109550	39.200	125	69	2	7	131	10	127	1.89e-15	72.8
MsG0180005645.01.T01	MTR_1g109550	34.307	137	57	3	104	240	24	127	9.53e-12	62.4
MsG0180005645.01.T01	MTR_6g008970	35.065	154	91	3	11	158	61	211	2.77e-15	77.4
MsG0180005645.01.T01	MTR_6g008970	29.586	169	96	1	99	267	66	211	7.72e-12	67.0
MsG0180005645.01.T01	MTR_6g008995	34.667	150	91	3	13	158	37	183	3.33e-15	76.6
MsG0180005645.01.T01	MTR_1g105010	52.381	63	30	0	13	75	16	78	1.53e-14	69.7
MsG0180005645.01.T01	MTR_8g062350	44.286	70	39	0	13	82	14	83	3.77e-12	65.1

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180005645.01.T01	AT1G27260	36.994	173	90	2	99	271	6	159	1.32e-24	99.8
MsG0180005645.01.T01	AT1G27260	35.519	183	103	3	11	183	1	178	2.07e-23	96.7
MsG0180005645.01.T01	AT1G27260	35.345	116	73	1	208	321	6	121	8.06e-11	61.6
MsG0180005645.01.T01	AT1G24230	36.025	161	90	4	11	170	12	160	1.38e-21	92.4
MsG0180005645.01.T01	AT1G23810	31.507	219	133	4	99	316	17	219	6.02e-21	90.5
MsG0180005645.01.T01	AT1G23810	28.261	184	110	5	16	183	17	194	2.48e-13	68.9
MsG0180005645.01.T01	AT1G24250	30.455	220	145	4	99	316	17	230	4.43e-20	88.2
MsG0180005645.01.T01	AT1G24250	28.718	195	106	6	16	183	17	205	3.75e-13	68.9
MsG0180005645.01.T01	AT1G10450	33.939	165	98	4	1	158	19	179	1.40e-16	81.3
MsG0180005645.01.T01	AT1G10450	31.765	170	89	3	99	267	36	179	1.08e-12	69.3
MsG0180005645.01.T01	AT1G10450	33.939	165	98	4	1	158	19	179	1.40e-16	81.3
MsG0180005645.01.T01	AT1G10450	31.765	170	89	3	99	267	36	179	1.08e-12	69.3
MsG0180005645.01.T01	AT1G10450	33.939	165	98	4	1	158	70	230	1.43e-16	81.3
MsG0180005645.01.T01	AT1G10450	31.765	170	89	3	99	267	87	230	1.16e-12	69.3
MsG0180005645.01.T01	AT1G24190	34.940	166	92	6	11	166	12	171	8.90e-16	79.0
MsG0180005645.01.T01	AT1G24190	30.556	180	97	6	99	275	17	171	7.01e-12	67.0
MsG0180005645.01.T01	AT1G24190	34.940	166	92	6	11	166	12	171	9.14e-16	79.0
MsG0180005645.01.T01	AT1G24190	30.556	180	97	6	99	275	17	171	7.33e-12	67.0
MsG0180005645.01.T01	AT1G24190	34.940	166	92	6	11	166	12	171	9.33e-16	79.0
MsG0180005645.01.T01	AT1G24190	30.556	180	97	6	99	275	17	171	7.68e-12	67.0
MsG0180005645.01.T01	AT5G15020	36.184	152	86	4	13	158	52	198	1.05e-15	78.6
MsG0180005645.01.T01	AT5G15020	28.421	190	108	3	99	285	55	219	5.80e-11	64.3
MsG0180005645.01.T01	AT5G15020	36.184	152	86	4	13	158	52	198	1.13e-15	78.6
MsG0180005645.01.T01	AT5G15020	28.421	190	108	3	99	285	55	219	6.24e-11	63.9
MsG0180005645.01.T01	AT3G01320	33.918	171	97	6	11	174	55	216	2.34e-15	77.8
MsG0180005645.01.T01	AT3G01320	28.108	185	105	3	99	283	60	216	5.55e-11	64.3
MsG0180005645.01.T01	AT3G01320	33.918	171	97	6	11	174	55	216	2.57e-15	77.4
MsG0180005645.01.T01	AT3G01320	28.108	185	105	3	99	283	60	216	6.36e-11	63.9
MsG0180005645.01.T01	AT1G70060	35.185	162	95	4	4	158	5	163	6.80e-15	76.3
MsG0180005645.01.T01	AT1G70060	30.178	169	96	2	99	267	17	163	8.78e-12	66.6
MsG0180005645.01.T01	AT1G70060	35.185	162	95	4	4	158	5	163	6.80e-15	76.3
MsG0180005645.01.T01	AT1G70060	30.178	169	96	2	99	267	17	163	8.78e-12	66.6
MsG0180005645.01.T01	AT1G59890	34.416	154	86	4	13	158	45	191	3.48e-13	70.9
MsG0180005645.01.T01	AT1G59890	34.416	154	86	4	13	158	45	191	4.14e-13	70.9
MsG0180005645.01.T01	AT1G59890	34.416	154	86	4	13	158	45	191	4.22e-13	70.9
MsG0180005645.01.T01	AT1G59890	34.416	154	86	4	13	158	45	191	4.42e-13	70.5
MsG0180005645.01.T01	AT1G27280	31.646	158	103	2	24	176	4	161	1.24e-12	66.6
MsG0180005645.01.T01	AT1G27280	30.168	179	104	4	107	285	4	161	1.25e-11	63.9
MsG0180005645.01.T01	AT1G24200	32.515	163	86	6	9	159	10	160	1.40e-12	66.2
MsG0180005645.01.T01	AT1G24200	44.578	83	43	2	191	273	3	82	5.34e-12	64.3
MsG0180005645.01.T01	AT1G27220	40.260	77	46	0	5	81	6	82	1.76e-12	65.5
MsG0180005645.01.T01	AT5G15025	40.741	81	48	0	2	82	36	116	1.83e-12	63.9
MsG0180005645.01.T01	AT5G15040	41.791	67	39	0	99	165	6	72	1.04e-11	60.8
MsG0180005645.01.T01	AT5G15040	37.681	69	43	0	206	274	4	72	5.38e-11	58.9
MsG0180005645.01.T01	AT5G15040	41.791	67	39	0	99	165	6	72	1.04e-11	60.8
MsG0180005645.01.T01	AT5G15040	37.681	69	43	0	206	274	4	72	5.38e-11	58.9
MsG0180005645.01.T01	AT5G15040	41.791	67	39	0	99	165	6	72	1.04e-11	60.8
MsG0180005645.01.T01	AT5G15040	37.681	69	43	0	206	274	4	72	5.38e-11	58.9

Find 48 sgRNAs with CRISPR-Local

Find 58 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ACTGCTGTTGCAAACGAATT+TGG	0.114157	1:-94422361	None:intergenic
GTCCCAAAAGTAAATCTTTA+TGG	0.189829	1:-94422507	None:intergenic
TGAAACTCCTACATGATTTC+AGG	0.203193	1:+94422179	MsG0180005645.01.T01:CDS
AACTCTAAAATCAATTCTTT+TGG	0.284021	1:-94422779	None:intergenic
AACTCTCATATCAATTCTTT+TGG	0.286653	1:-94422452	None:intergenic
CTGCTGTTGCAAACGAATTT+GGG	0.300087	1:-94422360	None:intergenic
AACTCTTCTATCAATTCTTT+TGG	0.305538	1:-94422203	None:intergenic
AGACCATAAAGATTTACTTT+TGG	0.338463	1:+94422504	MsG0180005645.01.T01:CDS
TGAAGCAATGACGTTTATAA+AGG	0.363280	1:+94422108	MsG0180005645.01.T01:CDS
CGTCATTGCTTCACCAATCA+AGG	0.390356	1:-94422098	None:intergenic
AGTTGCATTTCCAGATAAGA+TGG	0.401348	1:+94422387	MsG0180005645.01.T01:CDS
AGTTGCATTTCAAGATAAGA+TGG	0.422713	1:+94422714	MsG0180005645.01.T01:CDS
ACTTGTGTTTCAAGATAAGA+AGG	0.472355	1:+94422138	MsG0180005645.01.T01:CDS
AGTTGTCAAAGATGGAGTTA+TGG	0.472541	1:+94422222	MsG0180005645.01.T01:CDS
TTCAACATCTTCTTGCCAGC+AGG	0.472583	1:+94422280	MsG0180005645.01.T01:CDS
AGTAGAACTAATCCCTTGAT+TGG	0.477123	1:+94422085	MsG0180005645.01.T01:CDS
CTTCTATTCTTCTTGCCACC+AGG	0.488485	1:+94422316	MsG0180005645.01.T01:CDS
GATAGAAGAGTTGTCAAAGA+TGG	0.492886	1:+94422214	MsG0180005645.01.T01:CDS
AATCAAGGGATTAGTTCTAC+TGG	0.506014	1:-94422083	None:intergenic
GAAACTCCTACATGATTTCA+GGG	0.508203	1:+94422180	MsG0180005645.01.T01:CDS
ACACAAAATCTCACTTCCAT+TGG	0.512949	1:+94422879	MsG0180005645.01.T01:CDS
ACACAAAATCTCACTTCCAT+TGG	0.514630	1:+94422552	MsG0180005645.01.T01:CDS
GATGAACAACAAGGTGATGA+TGG	0.529706	1:+94422907	MsG0180005645.01.T01:CDS
AACGAATTTGGGAATAGAAG+TGG	0.545086	1:-94422349	None:intergenic
GATGAACAACAAGGTGGAGA+TGG	0.545992	1:+94422580	MsG0180005645.01.T01:CDS
TGAACTTCAAGTTGATGAAG+TGG	0.554268	1:+94422993	MsG0180005645.01.T01:CDS
CTCAACACTTGGTTGCCAGC+AGG	0.555626	1:+94422856	MsG0180005645.01.T01:CDS
GATGCTGAACAACAAGGTGA+TGG	0.558029	1:+94422955	MsG0180005645.01.T01:CDS
ACGAATTTGGGAATAGAAGT+GGG	0.571692	1:-94422348	None:intergenic
AGTGGGATTTCATCTCCTGC+TGG	0.573929	1:-94422295	None:intergenic
TGTTGTTCATCACCATCCAA+TGG	0.575143	1:-94422568	None:intergenic
TGTTGTTCATCACCATCCAA+TGG	0.575143	1:-94422895	None:intergenic
GATGATGAACAACAAGGTGA+TGG	0.578290	1:+94422628	MsG0180005645.01.T01:CDS
AGAAGTGGGAATTCATGTCC+TGG	0.583648	1:-94422334	None:intergenic
ACTCAACACTTGGTTGCCAG+TGG	0.586298	1:+94422528	MsG0180005645.01.T01:CDS
GTCATTGCTTCACCAATCAA+GGG	0.590508	1:-94422097	None:intergenic
AAAATCTCACTTCCATTGGA+TGG	0.592611	1:+94422556	MsG0180005645.01.T01:CDS
AAAATCTCACTTCCATTGGA+TGG	0.592611	1:+94422883	MsG0180005645.01.T01:CDS
GGTGGCAAGAAGAATAGAAG+TGG	0.618772	1:-94422313	None:intergenic
TGAACAACAAGGTGATGGAT+CGG	0.624867	1:+94422633	MsG0180005645.01.T01:CDS
CAGAAAGATGCTGAACAACA+AGG	0.627330	1:+94422949	MsG0180005645.01.T01:CDS
CTCAACACTTGGTTGCCAGT+GGG	0.645795	1:+94422529	MsG0180005645.01.T01:CDS
GTGGCAAGAAGAATAGAAGT+GGG	0.680483	1:-94422312	None:intergenic
AGTGGGAATTCATGTCCTGG+TGG	0.708807	1:-94422331	None:intergenic
CAGAATGATGATGAACAACA+AGG	0.749951	1:+94422622	MsG0180005645.01.T01:CDS
GATGGTGATGAACAACAAGG+TGG	0.767576	1:+94422574	MsG0180005645.01.T01:CDS
TTGGATGGTGATGAACAACA+AGG	0.791947	1:+94422571	MsG0180005645.01.T01:CDS
TTGGATGGTGATGAACAACA+AGG	0.791947	1:+94422898	MsG0180005645.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	AACTCTAAAATCAATTCTTT+TGG	-	Chr1:94422782-94422801	None:intergenic	20.0%
!!!	AGACCATAAAAATTTACTTT+TGG	+	Chr1:94422831-94422850	MsG0180005645.01.T01:CDS	20.0%
!!!	GACCATAAAAATTTACTTTT+GGG	+	Chr1:94422832-94422851	MsG0180005645.01.T01:CDS	20.0%
!!	AACTCTCATATCAATTCTTT+TGG	-	Chr1:94422455-94422474	None:intergenic	25.0%
!!	AACTCTTCTATCAATTCTTT+TGG	-	Chr1:94422206-94422225	None:intergenic	25.0%
!!	AGACCATAAAGATTTACTTT+TGG	+	Chr1:94422504-94422523	MsG0180005645.01.T01:CDS	25.0%
!!	GTCCCAAAAGTAAATTTTTA+TGG	-	Chr1:94422837-94422856	None:intergenic	25.0%
!!!	GACCATAAAGATTTACTTTT+GGG	+	Chr1:94422505-94422524	MsG0180005645.01.T01:CDS	25.0%
!!!	GATTTTAGAGTTTTCAAAGA+AGG	+	Chr1:94422790-94422809	MsG0180005645.01.T01:CDS	25.0%
	ACTTGTGTTTCAAGATAAGA+AGG	+	Chr1:94422138-94422157	MsG0180005645.01.T01:CDS	30.0%
	AGTTGCATTTCAAGATAAGA+TGG	+	Chr1:94422714-94422733	MsG0180005645.01.T01:CDS	30.0%
	GTCCCAAAAGTAAATCTTTA+TGG	-	Chr1:94422510-94422529	None:intergenic	30.0%
	TGAAGCAATGACGTTTATAA+AGG	+	Chr1:94422108-94422127	MsG0180005645.01.T01:CDS	30.0%
!	AGTTTTCAAAGAAGGAATGA+TGG	+	Chr1:94422471-94422490	MsG0180005645.01.T01:CDS	30.0%
!	GATATGAGAGTTTTCAAAGA+AGG	+	Chr1:94422463-94422482	MsG0180005645.01.T01:CDS	30.0%
!	TAGAGTTTTCAAAGAAGGAA+TGG	+	Chr1:94422795-94422814	MsG0180005645.01.T01:CDS	30.0%
!	TCATACTTTTCCATCTTATC+TGG	-	Chr1:94422400-94422419	None:intergenic	30.0%
	AAAATCTCACTTCCATTGGA+TGG	+	Chr1:94422556-94422575	MsG0180005645.01.T01:CDS	35.0%
	AACGAATTTGGGAATAGAAG+TGG	-	Chr1:94422352-94422371	None:intergenic	35.0%
	ACACAAAATCTCACTTCCAT+TGG	+	Chr1:94422552-94422571	MsG0180005645.01.T01:CDS	35.0%
	ACGAATTTGGGAATAGAAGT+GGG	-	Chr1:94422351-94422370	None:intergenic	35.0%
	AGTAGAACTAATCCCTTGAT+TGG	+	Chr1:94422085-94422104	MsG0180005645.01.T01:CDS	35.0%
	AGTTGCATTTCCAGATAAGA+TGG	+	Chr1:94422387-94422406	MsG0180005645.01.T01:CDS	35.0%
	AGTTGTCAAAGATGGAGTTA+TGG	+	Chr1:94422222-94422241	MsG0180005645.01.T01:CDS	35.0%
	GAAACTCCTACATGATTTCA+GGG	+	Chr1:94422180-94422199	MsG0180005645.01.T01:CDS	35.0%
	GATAGAAGAGTTGTCAAAGA+TGG	+	Chr1:94422214-94422233	MsG0180005645.01.T01:CDS	35.0%
	TGAAACTCCTACATGATTTC+AGG	+	Chr1:94422179-94422198	MsG0180005645.01.T01:CDS	35.0%
!	AGTTTTCAAAGAAGGAATGG+TGG	+	Chr1:94422798-94422817	MsG0180005645.01.T01:CDS	35.0%
!	CAGAATGATGATGAACAACA+AGG	+	Chr1:94422622-94422641	MsG0180005645.01.T01:CDS	35.0%
!!	AATCAAGGGATTAGTTCTAC+TGG	-	Chr1:94422086-94422105	None:intergenic	35.0%
!!	TGAACTTCAAGTTGATGAAG+TGG	+	Chr1:94422993-94423012	MsG0180005645.01.T01:CDS	35.0%
	ACTGCTGTTGCAAACGAATT+TGG	-	Chr1:94422364-94422383	None:intergenic	40.0%
	CAGAAAGATGCTGAACAACA+AGG	+	Chr1:94422949-94422968	MsG0180005645.01.T01:CDS	40.0%
	CTGCTGTTGCAAACGAATTT+GGG	-	Chr1:94422363-94422382	None:intergenic	40.0%
	GATGAACAACAAGGTGATGA+TGG	+	Chr1:94422907-94422926	MsG0180005645.01.T01:CDS	40.0%
	GATGATGAACAACAAGGTGA+TGG	+	Chr1:94422628-94422647	MsG0180005645.01.T01:CDS	40.0%
	GTCATTGCTTCACCAATCAA+GGG	-	Chr1:94422100-94422119	None:intergenic	40.0%
	GTGGCAAGAAGAATAGAAGT+GGG	-	Chr1:94422315-94422334	None:intergenic	40.0%
	TGTTGTTCATCACCATCCAA+TGG	-	Chr1:94422571-94422590	None:intergenic	40.0%
!	TTGGATGGTGATGAACAACA+AGG	+	Chr1:94422571-94422590	MsG0180005645.01.T01:CDS	40.0%
!	TTTTGGCCCTGAAATCATGT+AGG	-	Chr1:94422189-94422208	None:intergenic	40.0%
!!	TGAACAACAAGGTGATGGAT+CGG	+	Chr1:94422633-94422652	MsG0180005645.01.T01:CDS	40.0%
!!!	TACTTTTGGGACTCAACACT+TGG	+	Chr1:94422518-94422537	MsG0180005645.01.T01:CDS	40.0%
	AGAAGTGGGAATTCATGTCC+TGG	-	Chr1:94422337-94422356	None:intergenic	45.0%
	CGTCATTGCTTCACCAATCA+AGG	-	Chr1:94422101-94422120	None:intergenic	45.0%
	CTTCTATTCTTCTTGCCACC+AGG	+	Chr1:94422316-94422335	MsG0180005645.01.T01:CDS	45.0%
	GATGAACAACAAGGTGGAGA+TGG	+	Chr1:94422580-94422599	MsG0180005645.01.T01:CDS	45.0%
	GATGCTGAACAACAAGGTGA+TGG	+	Chr1:94422955-94422974	MsG0180005645.01.T01:CDS	45.0%
	GGTGGCAAGAAGAATAGAAG+TGG	-	Chr1:94422316-94422335	None:intergenic	45.0%
	TTCAACATCTTCTTGCCAGC+AGG	+	Chr1:94422280-94422299	MsG0180005645.01.T01:CDS	45.0%
!	AGTGAGATTTTGTGTCCCAC+TGG	-	Chr1:94422547-94422566	None:intergenic	45.0%
!	AGTGAGATTTTGTGTCCTGC+TGG	-	Chr1:94422874-94422893	None:intergenic	45.0%
!	GATGGTGATGAACAACAAGG+TGG	+	Chr1:94422574-94422593	MsG0180005645.01.T01:CDS	45.0%
	ACTCAACACTTGGTTGCCAG+TGG	+	Chr1:94422528-94422547	MsG0180005645.01.T01:CDS	50.0%
	AGTGGGAATTCATGTCCTGG+TGG	-	Chr1:94422334-94422353	None:intergenic	50.0%
	AGTGGGATTTCATCTCCTGC+TGG	-	Chr1:94422298-94422317	None:intergenic	50.0%
	CTCAACACTTGGTTGCCAGT+GGG	+	Chr1:94422529-94422548	MsG0180005645.01.T01:CDS	50.0%
	CTCAACACTTGGTTGCCAGC+AGG	+	Chr1:94422856-94422875	MsG0180005645.01.T01:CDS	55.0%

Chromosome	Type	Strat	End	Strand	Name
Chr1	gene	94422073	94423056	94422073	ID=MsG0180005645.01;Name=MsG0180005645.01
Chr1	mRNA	94422073	94423056	94422073	ID=MsG0180005645.01.T01;Parent=MsG0180005645.01;Name=MsG0180005645.01.T01;_AED=0.47;_eAED=0.47;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|327
Chr1	exon	94422073	94423056	94422073	ID=MsG0180005645.01.T01:exon:19191;Parent=MsG0180005645.01.T01
Chr1	CDS	94422073	94423056	94422073	ID=MsG0180005645.01.T01:cds;Parent=MsG0180005645.01.T01

Gene Sequence

>MsG0180005645.01.T01

ATGAACAGCTCCAGTAGAACTAATCCCTTGATTGGTGAAGCAATGACGTTTATAAAGGATGTAAAACTTGTGTTTCAAGATAAGAAGGAAAAGTTTAATGAATTCATGAAACTCCTACATGATTTCAGGGCCAAAAGAATTGATAGAAGAGTTGTCAAAGATGGAGTTATGGAGTTGTTGAAAGAACATCAAGATTTAATTTCAAGATTCAACATCTTCTTGCCAGCAGGAGATGAAATCCCACTTCTATTCTTCTTGCCACCAGGACATGAATTCCCACTTCTATTCCCAAATTCGTTTGCAACAGCAGTTAAAGTTGCATTTCCAGATAAGATGGAAAAGTATGATGAATTCTTGAAACTCGTAGTTGATTGCAATGCCAAAAGAATTGATATGAGAGTTTTCAAAGAAGGAATGATGGAGTTGTTTAAAGACCATAAAGATTTACTTTTGGGACTCAACACTTGGTTGCCAGTGGGACACAAAATCTCACTTCCATTGGATGGTGATGAACAACAAGGTGGAGATGGATTAGAGTTGAAAGATGCACAGAATGATGATGAACAACAAGGTGATGGATCGGCGCTCAAAGATGAATCAGCACTCGCAGATGCAACAAAGTCGTTTGCAACAGCAGTTAAAGTTGCATTTCAAGATAAGATGGATAAGTATGATGAATTCTTAAAACTCATAATTGATTGTCGTACCAAAAGAATTGATTTTAGAGTTTTCAAAGAAGGAATGGTGGAGTTGTTTAAAGACCATAAAAATTTACTTTTGGGACTCAACACTTGGTTGCCAGCAGGACACAAAATCTCACTTCCATTGGATGGTGATGAACAACAAGGTGATGATGGATTAGAGTTGAAAGATGCACAGAAAGATGCTGAACAACAAGGTGATGGATTAGAGTACAAAGATGAACTTCAAGTTGATGAAGTGGCACTCAAACTCAAAAATGAGCAGAAAGATGACGAACAATAA

Protein sequence

>MsG0180005645.01.T01

MNSSSRTNPLIGEAMTFIKDVKLVFQDKKEKFNEFMKLLHDFRAKRIDRRVVKDGVMELLKEHQDLISRFNIFLPAGDEIPLLFFLPPGHEFPLLFPNSFATAVKVAFPDKMEKYDEFLKLVVDCNAKRIDMRVFKEGMMELFKDHKDLLLGLNTWLPVGHKISLPLDGDEQQGGDGLELKDAQNDDEQQGDGSALKDESALADATKSFATAVKVAFQDKMDKYDEFLKLIIDCRTKRIDFRVFKEGMVELFKDHKNLLLGLNTWLPAGHKISLPLDGDEQQGDDGLELKDAQKDAEQQGDGLEYKDELQVDEVALKLKNEQKDDEQ*