Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180006048.01.T01 | XP_013470329.1 | 93.333 | 525 | 22 | 6 | 1 | 518 | 1 | 519 | 0 | 983 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180006048.01.T01 | Q9ZVX2 | 47.698 | 543 | 223 | 18 | 6 | 521 | 5 | 513 | 6.33E-143 | 426 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180006048.01.T01 | A0A072VRJ5 | 93.333 | 525 | 22 | 6 | 1 | 518 | 1 | 519 | 0.0 | 983 |
Gene ID | Type | Classification |
---|---|---|
MsG0180006048.01.T01 | TF | bHLH |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180006048.01.T01 | MTR_1g112680 | 93.333 | 525 | 22 | 6 | 1 | 518 | 1 | 519 | 0.0 | 983 |
MsG0180006048.01.T01 | MTR_8g064700 | 28.738 | 515 | 259 | 14 | 10 | 515 | 4 | 419 | 8.45e-58 | 198 |
MsG0180006048.01.T01 | MTR_3g498695 | 36.364 | 198 | 112 | 2 | 315 | 512 | 293 | 476 | 4.75e-35 | 137 |
MsG0180006048.01.T01 | MTR_3g498695 | 36.181 | 199 | 112 | 3 | 315 | 512 | 293 | 477 | 5.58e-34 | 134 |
MsG0180006048.01.T01 | MTR_7g083900 | 35.961 | 203 | 101 | 4 | 319 | 512 | 285 | 467 | 1.43e-30 | 124 |
MsG0180006048.01.T01 | MTR_7g083900 | 35.784 | 204 | 101 | 4 | 319 | 512 | 285 | 468 | 1.90e-30 | 124 |
MsG0180006048.01.T01 | MTR_3g030700 | 34.946 | 186 | 102 | 3 | 310 | 495 | 186 | 352 | 3.90e-25 | 107 |
MsG0180006048.01.T01 | MTR_2g081040 | 31.633 | 196 | 117 | 4 | 319 | 512 | 176 | 356 | 1.06e-23 | 102 |
MsG0180006048.01.T01 | MTR_2g038040 | 34.066 | 182 | 104 | 5 | 313 | 491 | 45 | 213 | 8.39e-22 | 95.1 |
MsG0180006048.01.T01 | MTR_3g104100 | 31.771 | 192 | 87 | 5 | 319 | 495 | 194 | 356 | 1.37e-21 | 97.1 |
MsG0180006048.01.T01 | MTR_4g091990 | 30.415 | 217 | 100 | 5 | 284 | 492 | 3 | 176 | 1.42e-20 | 90.1 |
MsG0180006048.01.T01 | MTR_4g091910 | 34.132 | 167 | 81 | 3 | 319 | 485 | 46 | 183 | 1.83e-20 | 90.1 |
MsG0180006048.01.T01 | MTR_2g084280 | 31.579 | 171 | 81 | 3 | 305 | 472 | 121 | 258 | 9.84e-19 | 87.4 |
MsG0180006048.01.T01 | MTR_5g030770 | 30.189 | 212 | 100 | 6 | 308 | 511 | 144 | 315 | 1.24e-17 | 84.3 |
MsG0180006048.01.T01 | MTR_4g057270 | 32.298 | 161 | 77 | 5 | 314 | 468 | 143 | 277 | 2.02e-17 | 84.0 |
MsG0180006048.01.T01 | MTR_3g111290 | 30.244 | 205 | 104 | 6 | 308 | 511 | 161 | 327 | 4.79e-17 | 82.8 |
MsG0180006048.01.T01 | MTR_5g030770 | 29.245 | 212 | 96 | 6 | 308 | 511 | 144 | 309 | 5.62e-16 | 79.3 |
MsG0180006048.01.T01 | MTR_1g072320 | 28.718 | 195 | 106 | 6 | 314 | 497 | 459 | 631 | 4.09e-15 | 78.6 |
MsG0180006048.01.T01 | MTR_8g024790 | 30.208 | 192 | 97 | 7 | 299 | 482 | 268 | 430 | 1.76e-14 | 76.3 |
MsG0180006048.01.T01 | MTR_8g098275 | 31.892 | 185 | 108 | 5 | 300 | 474 | 288 | 464 | 3.19e-14 | 75.5 |
MsG0180006048.01.T01 | MTR_8g098275 | 32.432 | 185 | 107 | 6 | 300 | 474 | 224 | 400 | 3.44e-14 | 75.1 |
MsG0180006048.01.T01 | MTR_8g098275 | 31.892 | 185 | 108 | 5 | 300 | 474 | 381 | 557 | 4.82e-14 | 75.1 |
MsG0180006048.01.T01 | MTR_5g030430 | 30.108 | 186 | 106 | 5 | 304 | 481 | 472 | 641 | 9.22e-14 | 74.3 |
MsG0180006048.01.T01 | MTR_0250s0040 | 28.571 | 175 | 101 | 5 | 306 | 480 | 74 | 224 | 1.34e-13 | 71.6 |
MsG0180006048.01.T01 | MTR_8g027495 | 28.415 | 183 | 99 | 4 | 324 | 506 | 462 | 612 | 1.74e-13 | 73.6 |
MsG0180006048.01.T01 | MTR_7g096350 | 42.045 | 88 | 50 | 1 | 288 | 375 | 324 | 410 | 1.74e-13 | 73.2 |
MsG0180006048.01.T01 | MTR_0246s0020 | 25.714 | 175 | 99 | 4 | 312 | 480 | 190 | 339 | 5.50e-13 | 70.9 |
MsG0180006048.01.T01 | MTR_0246s0020 | 25.714 | 175 | 99 | 4 | 312 | 480 | 190 | 339 | 5.58e-13 | 70.9 |
MsG0180006048.01.T01 | MTR_5g014600 | 28.962 | 183 | 112 | 7 | 313 | 494 | 142 | 307 | 6.34e-13 | 70.5 |
MsG0180006048.01.T01 | MTR_8g067280 | 31.056 | 161 | 92 | 5 | 324 | 481 | 466 | 610 | 7.20e-13 | 71.6 |
MsG0180006048.01.T01 | MTR_6g047570 | 30.055 | 183 | 103 | 6 | 298 | 480 | 138 | 295 | 2.30e-12 | 68.6 |
MsG0180006048.01.T01 | MTR_7g117670 | 55.556 | 54 | 24 | 0 | 324 | 377 | 406 | 459 | 2.86e-12 | 69.7 |
MsG0180006048.01.T01 | MTR_8g024770 | 40.260 | 77 | 44 | 1 | 299 | 373 | 256 | 332 | 7.29e-12 | 67.8 |
MsG0180006048.01.T01 | MTR_5g014520 | 27.717 | 184 | 88 | 6 | 307 | 480 | 145 | 293 | 1.09e-11 | 66.6 |
MsG0180006048.01.T01 | MTR_5g014640 | 33.000 | 100 | 60 | 1 | 292 | 384 | 119 | 218 | 1.31e-11 | 66.2 |
MsG0180006048.01.T01 | MTR_5g014560 | 31.884 | 138 | 79 | 3 | 239 | 375 | 63 | 186 | 1.32e-11 | 66.2 |
MsG0180006048.01.T01 | MTR_2g104550 | 28.022 | 182 | 103 | 4 | 304 | 480 | 117 | 275 | 1.35e-11 | 66.2 |
MsG0180006048.01.T01 | MTR_2g104560 | 25.281 | 178 | 99 | 5 | 307 | 480 | 41 | 188 | 1.36e-11 | 64.7 |
MsG0180006048.01.T01 | MTR_4g092700 | 49.091 | 55 | 28 | 0 | 321 | 375 | 159 | 213 | 3.63e-11 | 65.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180006048.01.T01 | AT2G16910 | 47.698 | 543 | 223 | 18 | 6 | 521 | 5 | 513 | 6.45e-144 | 426 |
MsG0180006048.01.T01 | AT3G26744 | 33.990 | 203 | 103 | 3 | 319 | 512 | 306 | 486 | 7.42e-31 | 125 |
MsG0180006048.01.T01 | AT3G26744 | 33.990 | 203 | 103 | 3 | 319 | 512 | 306 | 486 | 7.42e-31 | 125 |
MsG0180006048.01.T01 | AT3G26744 | 33.990 | 203 | 103 | 3 | 319 | 512 | 306 | 486 | 7.42e-31 | 125 |
MsG0180006048.01.T01 | AT1G12860 | 35.897 | 195 | 106 | 3 | 319 | 512 | 266 | 442 | 1.22e-30 | 124 |
MsG0180006048.01.T01 | AT3G26744 | 36.413 | 184 | 87 | 2 | 319 | 494 | 306 | 467 | 1.71e-30 | 124 |
MsG0180006048.01.T01 | AT1G12860 | 36.932 | 176 | 93 | 2 | 319 | 494 | 266 | 423 | 1.53e-29 | 121 |
MsG0180006048.01.T01 | AT1G10610 | 34.783 | 161 | 88 | 5 | 7 | 156 | 8 | 162 | 9.46e-22 | 98.2 |
MsG0180006048.01.T01 | AT1G10610 | 27.041 | 196 | 122 | 3 | 318 | 513 | 262 | 436 | 5.45e-17 | 84.0 |
MsG0180006048.01.T01 | AT5G57150 | 32.512 | 203 | 116 | 5 | 302 | 499 | 32 | 218 | 7.02e-21 | 92.4 |
MsG0180006048.01.T01 | AT5G57150 | 32.323 | 198 | 113 | 5 | 302 | 494 | 32 | 213 | 1.09e-20 | 91.3 |
MsG0180006048.01.T01 | AT5G57150 | 32.323 | 198 | 113 | 5 | 302 | 494 | 33 | 214 | 1.82e-20 | 90.5 |
MsG0180006048.01.T01 | AT5G57150 | 32.323 | 198 | 113 | 5 | 302 | 494 | 33 | 214 | 1.83e-20 | 90.9 |
MsG0180006048.01.T01 | AT5G57150 | 32.323 | 198 | 113 | 5 | 302 | 494 | 33 | 214 | 2.04e-20 | 91.7 |
MsG0180006048.01.T01 | AT4G21330 | 29.146 | 199 | 118 | 4 | 318 | 516 | 30 | 205 | 1.56e-17 | 81.6 |
MsG0180006048.01.T01 | AT2G28160 | 30.625 | 160 | 89 | 4 | 312 | 471 | 123 | 260 | 2.23e-17 | 83.6 |
MsG0180006048.01.T01 | AT2G28160 | 30.625 | 160 | 89 | 4 | 312 | 471 | 123 | 260 | 2.55e-17 | 83.6 |
MsG0180006048.01.T01 | AT1G10610 | 27.041 | 196 | 122 | 3 | 318 | 513 | 165 | 339 | 5.26e-17 | 82.8 |
MsG0180006048.01.T01 | AT1G10610 | 27.041 | 196 | 122 | 3 | 318 | 513 | 232 | 406 | 5.26e-17 | 83.6 |
MsG0180006048.01.T01 | AT1G10610 | 32.090 | 134 | 75 | 4 | 33 | 156 | 5 | 132 | 1.23e-13 | 73.2 |
MsG0180006048.01.T01 | AT1G63650 | 28.125 | 192 | 124 | 4 | 323 | 510 | 408 | 589 | 7.57e-17 | 84.0 |
MsG0180006048.01.T01 | AT1G63650 | 28.125 | 192 | 124 | 4 | 323 | 510 | 408 | 589 | 7.57e-17 | 84.0 |
MsG0180006048.01.T01 | AT1G63650 | 28.125 | 192 | 124 | 4 | 323 | 510 | 408 | 589 | 7.57e-17 | 84.0 |
MsG0180006048.01.T01 | AT5G65640 | 30.415 | 217 | 117 | 6 | 308 | 521 | 166 | 351 | 9.71e-17 | 82.0 |
MsG0180006048.01.T01 | AT4G29930 | 29.744 | 195 | 118 | 5 | 319 | 504 | 53 | 237 | 2.42e-16 | 79.3 |
MsG0180006048.01.T01 | AT5G46760 | 30.380 | 158 | 90 | 3 | 324 | 481 | 419 | 556 | 2.47e-16 | 82.4 |
MsG0180006048.01.T01 | AT2G46510 | 44.086 | 93 | 47 | 1 | 305 | 392 | 375 | 467 | 8.44e-16 | 80.9 |
MsG0180006048.01.T01 | AT5G10570 | 30.918 | 207 | 99 | 7 | 310 | 511 | 138 | 305 | 1.09e-15 | 78.6 |
MsG0180006048.01.T01 | AT4G29930 | 29.444 | 180 | 110 | 4 | 319 | 491 | 53 | 222 | 4.43e-15 | 75.9 |
MsG0180006048.01.T01 | AT4G29930 | 29.444 | 180 | 110 | 4 | 319 | 491 | 53 | 222 | 4.43e-15 | 75.9 |
MsG0180006048.01.T01 | AT4G17880 | 30.055 | 183 | 99 | 5 | 304 | 481 | 395 | 553 | 6.23e-15 | 78.2 |
MsG0180006048.01.T01 | AT5G65640 | 57.746 | 71 | 30 | 0 | 308 | 378 | 166 | 236 | 6.59e-15 | 75.9 |
MsG0180006048.01.T01 | AT4G37850 | 28.495 | 186 | 110 | 5 | 315 | 500 | 147 | 309 | 8.79e-15 | 75.9 |
MsG0180006048.01.T01 | AT4G37850 | 28.495 | 186 | 110 | 5 | 315 | 500 | 147 | 309 | 8.79e-15 | 75.9 |
MsG0180006048.01.T01 | AT4G29930 | 55.000 | 60 | 27 | 0 | 319 | 378 | 53 | 112 | 4.92e-14 | 70.9 |
MsG0180006048.01.T01 | AT4G29930 | 28.723 | 188 | 103 | 4 | 319 | 504 | 53 | 211 | 5.00e-14 | 72.0 |
MsG0180006048.01.T01 | AT4G29930 | 55.000 | 60 | 27 | 0 | 319 | 378 | 53 | 112 | 5.63e-14 | 72.0 |
MsG0180006048.01.T01 | AT4G29930 | 55.000 | 60 | 27 | 0 | 319 | 378 | 53 | 112 | 6.18e-14 | 72.0 |
MsG0180006048.01.T01 | AT5G41315 | 26.866 | 201 | 139 | 5 | 312 | 510 | 441 | 635 | 7.07e-14 | 74.7 |
MsG0180006048.01.T01 | AT5G41315 | 26.842 | 190 | 134 | 4 | 323 | 510 | 444 | 630 | 7.34e-14 | 74.7 |
MsG0180006048.01.T01 | AT5G41315 | 26.842 | 190 | 134 | 4 | 323 | 510 | 452 | 638 | 7.48e-14 | 74.7 |
MsG0180006048.01.T01 | AT4G09820 | 27.957 | 186 | 88 | 4 | 321 | 504 | 364 | 505 | 2.26e-13 | 72.8 |
MsG0180006048.01.T01 | AT5G46830 | 27.128 | 188 | 110 | 4 | 324 | 511 | 347 | 507 | 1.41e-12 | 70.5 |
MsG0180006048.01.T01 | AT1G01260 | 42.045 | 88 | 49 | 2 | 291 | 377 | 404 | 490 | 2.02e-12 | 70.1 |
MsG0180006048.01.T01 | AT1G01260 | 42.045 | 88 | 49 | 2 | 291 | 377 | 404 | 490 | 2.02e-12 | 70.1 |
MsG0180006048.01.T01 | AT1G01260 | 42.045 | 88 | 49 | 2 | 291 | 377 | 404 | 490 | 2.02e-12 | 70.1 |
MsG0180006048.01.T01 | AT4G16430 | 43.421 | 76 | 38 | 1 | 305 | 375 | 300 | 375 | 5.67e-12 | 68.6 |
MsG0180006048.01.T01 | AT3G24140 | 26.829 | 205 | 127 | 6 | 321 | 513 | 199 | 392 | 6.55e-12 | 67.8 |
MsG0180006048.01.T01 | AT1G32640 | 29.255 | 188 | 109 | 4 | 324 | 511 | 456 | 619 | 7.67e-12 | 68.2 |
MsG0180006048.01.T01 | AT3G24140 | 26.829 | 205 | 127 | 6 | 321 | 513 | 199 | 392 | 7.92e-12 | 67.8 |
MsG0180006048.01.T01 | AT2G22750 | 28.743 | 167 | 100 | 3 | 314 | 480 | 148 | 295 | 2.15e-11 | 65.9 |
MsG0180006048.01.T01 | AT2G22750 | 28.743 | 167 | 100 | 3 | 314 | 480 | 148 | 295 | 2.16e-11 | 65.9 |
MsG0180006048.01.T01 | AT2G22750 | 28.743 | 167 | 100 | 3 | 314 | 480 | 144 | 291 | 2.23e-11 | 65.9 |
MsG0180006048.01.T01 | AT2G22750 | 28.743 | 167 | 100 | 3 | 314 | 480 | 120 | 267 | 2.51e-11 | 65.1 |
MsG0180006048.01.T01 | AT2G22750 | 28.743 | 167 | 100 | 3 | 314 | 480 | 120 | 267 | 2.58e-11 | 65.1 |
MsG0180006048.01.T01 | AT3G06120 | 27.528 | 178 | 117 | 5 | 321 | 494 | 3 | 172 | 4.20e-11 | 62.8 |
MsG0180006048.01.T01 | AT2G22770 | 29.114 | 158 | 103 | 4 | 321 | 478 | 133 | 281 | 4.68e-11 | 64.7 |
MsG0180006048.01.T01 | AT4G00870 | 40.323 | 62 | 37 | 0 | 324 | 385 | 253 | 314 | 7.42e-11 | 64.7 |
Find 102 sgRNAs with CRISPR-Local
Find 160 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTGATAGAGCTTCTATTCT+TGG | 0.152880 | 1:+99367902 | MsG0180006048.01.T01:CDS |
CTATCAAGCTTTGAGATTCT+TGG | 0.205780 | 1:-99367887 | None:intergenic |
CTCTTGTTGGTTTGAATGGC+TGG | 0.239275 | 1:+99366022 | MsG0180006048.01.T01:CDS |
TGAAATCCATGTTCTGCTTT+TGG | 0.239465 | 1:-99368076 | None:intergenic |
TATATATAGGTATCTTGAAT+TGG | 0.283076 | 1:+99366191 | MsG0180006048.01.T01:intron |
CAGCAACAAGGTTCTTTGAT+TGG | 0.308174 | 1:-99367808 | None:intergenic |
GTGGAAGTGGCTCAGATAGA+TGG | 0.338551 | 1:+99368306 | MsG0180006048.01.T01:CDS |
GTTATATAACCTTCGTTCAT+TGG | 0.349149 | 1:+99367862 | MsG0180006048.01.T01:CDS |
AGATCACAAGAGTTTGTTCT+TGG | 0.351468 | 1:-99366306 | None:intergenic |
GGTGTTCTTCTCCACCATTT+TGG | 0.356060 | 1:-99366242 | None:intergenic |
GAACTTACATGTAAAGTGTT+TGG | 0.359394 | 1:-99366525 | None:intergenic |
GAAGGAAGAAACTGAATGAT+AGG | 0.368436 | 1:+99367840 | MsG0180006048.01.T01:CDS |
CAAATCTTCATGCTGGAACT+TGG | 0.371640 | 1:+99368669 | MsG0180006048.01.T01:CDS |
AGACCTCTTGTTGGTTTGAA+TGG | 0.376737 | 1:+99366018 | MsG0180006048.01.T01:CDS |
GTGTTTGGATCCAAGCTATT+GGG | 0.381111 | 1:-99366510 | None:intergenic |
TAGGTATGGAAGTGGAAAGT+TGG | 0.382059 | 1:-99366335 | None:intergenic |
ATATATAGGTATCTTGAATT+GGG | 0.384859 | 1:+99366192 | MsG0180006048.01.T01:intron |
ATTGGGATAGTTCAACCAAT+TGG | 0.386734 | 1:-99366493 | None:intergenic |
GATTCCAGTGCCTGGTGGAC+TGG | 0.406904 | 1:+99366683 | MsG0180006048.01.T01:CDS |
TATATATACCCTGAATCTAT+AGG | 0.413784 | 1:-99366354 | None:intergenic |
TGAGCTCTTTGTAACTAAAC+AGG | 0.419409 | 1:+99366707 | MsG0180006048.01.T01:CDS |
AAGAGGATGATGGAAAATAT+AGG | 0.425274 | 1:+99367765 | MsG0180006048.01.T01:CDS |
AGTGTTTGGATCCAAGCTAT+TGG | 0.426318 | 1:-99366511 | None:intergenic |
ACTTCCATACCTATAGATTC+AGG | 0.426419 | 1:+99366345 | MsG0180006048.01.T01:CDS |
TTTCCCTGTCTCTTCATGTA+GGG | 0.439137 | 1:+99366266 | MsG0180006048.01.T01:CDS |
TTGGGATAGTTCAACCAATT+GGG | 0.440118 | 1:-99366492 | None:intergenic |
CTTGAATTGGGATGTTGTTG+TGG | 0.441147 | 1:+99366204 | MsG0180006048.01.T01:CDS |
TATTAACTAACCAACCCAAT+TGG | 0.442270 | 1:+99366478 | MsG0180006048.01.T01:CDS |
TATAGGAGAAGAAGTGGAAA+AGG | 0.445604 | 1:+99367782 | MsG0180006048.01.T01:CDS |
AGGTATGGAAGTGGAAAGTT+GGG | 0.445933 | 1:-99366334 | None:intergenic |
GAAGGGATGAACCACTCAAT+TGG | 0.446434 | 1:+99367344 | MsG0180006048.01.T01:CDS |
GAGAGATTAAGACCTCTTGT+TGG | 0.450531 | 1:+99366009 | MsG0180006048.01.T01:CDS |
AATTGGGATGTTGTTGTGGT+GGG | 0.454365 | 1:+99366208 | MsG0180006048.01.T01:CDS |
ATGGAGGCTTTGAACACTTT+AGG | 0.460171 | 1:+99368387 | MsG0180006048.01.T01:CDS |
AGTAACTGTGTATATGTTGA+TGG | 0.466614 | 1:+99368013 | MsG0180006048.01.T01:CDS |
ATCATGCACCTCTTCTGTGT+TGG | 0.467913 | 1:-99367618 | None:intergenic |
GGAAAATATAGGAGAAGAAG+TGG | 0.472548 | 1:+99367776 | MsG0180006048.01.T01:CDS |
GATCACAAGAGTTTGTTCTT+GGG | 0.473126 | 1:-99366305 | None:intergenic |
TCTTGTTGGTTTGAATGGCT+GGG | 0.473478 | 1:+99366023 | MsG0180006048.01.T01:CDS |
AAGAAGCAAGAACATGTTGT+TGG | 0.475916 | 1:+99367701 | MsG0180006048.01.T01:CDS |
GCTGGGATTACTGTGTCTAC+TGG | 0.476054 | 1:+99366040 | MsG0180006048.01.T01:CDS |
GGCTTTGAACACTTTAGGCA+TGG | 0.486692 | 1:+99368392 | MsG0180006048.01.T01:CDS |
ATGAATATTGCAGGCACAAG+TGG | 0.489997 | 1:+99368287 | MsG0180006048.01.T01:intron |
TCATGTTTCAAAACAAAAGC+AGG | 0.492292 | 1:+99368096 | MsG0180006048.01.T01:CDS |
GATTCAATGTGTCTGATGAA+TGG | 0.495437 | 1:-99367445 | None:intergenic |
TAATAATCAATATATGTTTG+TGG | 0.498103 | 1:+99367661 | MsG0180006048.01.T01:CDS |
GTTGAACTATCCCAATAGCT+TGG | 0.501147 | 1:+99366500 | MsG0180006048.01.T01:CDS |
CAGAATGAAGAAGAGGATGA+TGG | 0.501916 | 1:+99367755 | MsG0180006048.01.T01:CDS |
ATTGAACAGGATTCATGCAC+AGG | 0.504490 | 1:+99366452 | MsG0180006048.01.T01:intron |
TTCTCTTCCTCTCAGCAACA+AGG | 0.506548 | 1:-99367820 | None:intergenic |
GTATCCCTACATGAAGAGAC+AGG | 0.511754 | 1:-99366270 | None:intergenic |
ATACCCTGAATCTATAGGTA+TGG | 0.513797 | 1:-99366349 | None:intergenic |
GGGAGTGAAAGCAACCAAAA+TGG | 0.520448 | 1:+99366228 | MsG0180006048.01.T01:CDS |
TGGAAGTGGCTCAGATAGAT+GGG | 0.522256 | 1:+99368307 | MsG0180006048.01.T01:CDS |
TGAGACAAGACCCTTGTGAC+TGG | 0.522381 | 1:-99368436 | None:intergenic |
ATTGCAGGCACAAGTGGAAG+TGG | 0.525672 | 1:+99368293 | MsG0180006048.01.T01:intron |
TGAATCTATAGGTATGGAAG+TGG | 0.528440 | 1:-99366343 | None:intergenic |
CACGGAACAAATCTTCATGC+TGG | 0.531543 | 1:+99368662 | MsG0180006048.01.T01:CDS |
GAATTGGGATGTTGTTGTGG+TGG | 0.534233 | 1:+99366207 | MsG0180006048.01.T01:CDS |
CTTCCATACCTATAGATTCA+GGG | 0.537250 | 1:+99366346 | MsG0180006048.01.T01:CDS |
ATGCAATCGAATCCAATTGT+GGG | 0.539218 | 1:+99367386 | MsG0180006048.01.T01:CDS |
GGAAATTAAGTGAAGATCAA+AGG | 0.546606 | 1:+99366061 | MsG0180006048.01.T01:CDS |
CATGCAATCGAATCCAATTG+TGG | 0.546804 | 1:+99367385 | MsG0180006048.01.T01:CDS |
GATAGTTCAACCAATTGGGT+TGG | 0.554141 | 1:-99366488 | None:intergenic |
TACATGAAGAGACAGGGAAA+AGG | 0.554895 | 1:-99366263 | None:intergenic |
TTGAATTGAAACCAATTGAG+TGG | 0.557955 | 1:-99367355 | None:intergenic |
CAGGCACTGGAATCAAAACA+TGG | 0.559119 | 1:-99366674 | None:intergenic |
CAGTGATCAGAATGAAGAAG+AGG | 0.559858 | 1:+99367748 | MsG0180006048.01.T01:CDS |
TTGTTGCTGAGAGGAAGAGA+AGG | 0.562094 | 1:+99367822 | MsG0180006048.01.T01:CDS |
AAGAGCTCAACCAGTCCACC+AGG | 0.565516 | 1:-99366693 | None:intergenic |
ACCTTGGTATCCTTCAGAGA+AGG | 0.568708 | 1:-99367555 | None:intergenic |
ATCAATTTCACAAAACCACC+TGG | 0.575508 | 1:-99368366 | None:intergenic |
GATCATGAAGAAAAGAACCT+TGG | 0.576590 | 1:-99367571 | None:intergenic |
TCAACCAGTCCACCAGGCAC+TGG | 0.579883 | 1:-99366687 | None:intergenic |
AAACAAAAGCAGGAAGATGT+TGG | 0.583119 | 1:+99368106 | MsG0180006048.01.T01:CDS |
ATCTCAATGCATTGTCATGG+TGG | 0.583356 | 1:+99367316 | MsG0180006048.01.T01:CDS |
AAAGGAGAGTGAAATAGTTG+AGG | 0.586665 | 1:+99368606 | MsG0180006048.01.T01:CDS |
CACATCTCAATGCATTGTCA+TGG | 0.588350 | 1:+99367313 | MsG0180006048.01.T01:CDS |
AACAACGAAACCTTCTCTGA+AGG | 0.589214 | 1:+99367545 | MsG0180006048.01.T01:CDS |
TTCAATACAGATATGTCATG+TGG | 0.598259 | 1:-99367470 | None:intergenic |
AGAGCTTCAAGATGAACTTG+AGG | 0.601650 | 1:+99367967 | MsG0180006048.01.T01:CDS |
AATGTTCCAAAAGCAGAACA+TGG | 0.606756 | 1:+99368070 | MsG0180006048.01.T01:CDS |
TCTCAAATCCAACACAGAAG+AGG | 0.606938 | 1:+99367610 | MsG0180006048.01.T01:CDS |
ATTGTCATGGTGGATCAAGA+AGG | 0.607678 | 1:+99367326 | MsG0180006048.01.T01:CDS |
TGACAAACAGACACAGCAGA+TGG | 0.608522 | 1:+99368138 | MsG0180006048.01.T01:CDS |
ACCTTCTCTGAAGGATACCA+AGG | 0.618882 | 1:+99367554 | MsG0180006048.01.T01:CDS |
CAAAGAACCTTGTTGCTGAG+AGG | 0.619036 | 1:+99367813 | MsG0180006048.01.T01:CDS |
CTTGAGGAAAATTCAGACAC+AGG | 0.625559 | 1:+99367983 | MsG0180006048.01.T01:CDS |
TGCCACAGTAACCAGTCACA+AGG | 0.625627 | 1:+99368425 | MsG0180006048.01.T01:CDS |
AGATGCTATTGAATTTGTGA+AGG | 0.628469 | 1:+99367925 | MsG0180006048.01.T01:CDS |
CAGCCATTCAAACCAACAAG+AGG | 0.632565 | 1:-99366021 | None:intergenic |
ATTGTGGGTGATGAAAATGA+TGG | 0.641485 | 1:+99367401 | MsG0180006048.01.T01:CDS |
AGTGAAAGCAACCAAAATGG+TGG | 0.646392 | 1:+99366231 | MsG0180006048.01.T01:CDS |
ATTCACTACTAGAGCTGACA+CGG | 0.647595 | 1:+99368644 | MsG0180006048.01.T01:CDS |
TTCTTGGAACCAATGAACGA+AGG | 0.654816 | 1:-99367871 | None:intergenic |
ACCCTTGTGACTGGTTACTG+TGG | 0.657104 | 1:-99368427 | None:intergenic |
TTGTCATGGTGGATCAAGAA+GGG | 0.669108 | 1:+99367327 | MsG0180006048.01.T01:CDS |
CAAACAGACACAGCAGATGG+AGG | 0.675468 | 1:+99368141 | MsG0180006048.01.T01:CDS |
TGGGAATGAGTACTTTGTGA+AGG | 0.678653 | 1:+99368326 | MsG0180006048.01.T01:CDS |
TATCCCTACATGAAGAGACA+GGG | 0.687876 | 1:-99366269 | None:intergenic |
GCCACAGTAACCAGTCACAA+GGG | 0.696830 | 1:+99368426 | MsG0180006048.01.T01:CDS |
AGGCACTGGAATCAAAACAT+GGG | 0.706180 | 1:-99366673 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AGTTATTAGTATATTTATTT+AGG | - | Chr1:99367239-99367258 | None:intergenic | 10.0% |
!! | ATATAATAGAACAAAAAATA+TGG | - | Chr1:99366121-99366140 | None:intergenic | 10.0% |
!!! | ATGATATTAAATTTTTTTCT+TGG | + | Chr1:99368556-99368575 | MsG0180006048.01.T01:intron | 10.0% |
!!! | TAAATTTTAAATTAAGCTAA+AGG | - | Chr1:99366804-99366823 | None:intergenic | 10.0% |
!!! | TGATATTAAATTTTTTTCTT+GGG | + | Chr1:99368557-99368576 | MsG0180006048.01.T01:intron | 10.0% |
!! | AATTTATACACTAATAACAA+AGG | + | Chr1:99368189-99368208 | MsG0180006048.01.T01:intron | 15.0% |
!! | ATATAATTATGAACAGAAAA+AGG | + | Chr1:99368588-99368607 | MsG0180006048.01.T01:intron | 15.0% |
!! | ATTGAATGATATATACTATA+AGG | + | Chr1:99366920-99366939 | MsG0180006048.01.T01:intron | 15.0% |
!! | CATAATAAAAATATGAAGTT+CGG | + | Chr1:99367110-99367129 | MsG0180006048.01.T01:intron | 15.0% |
!! | TAATAATCAATATATGTTTG+TGG | + | Chr1:99367661-99367680 | MsG0180006048.01.T01:CDS | 15.0% |
!!! | ACTTTTTTGAATTATTATCA+AGG | + | Chr1:99367077-99367096 | MsG0180006048.01.T01:intron | 15.0% |
!!! | TATAAATTTTAGTATAAGCT+AGG | - | Chr1:99368177-99368196 | None:intergenic | 15.0% |
!!! | TTTGTTGGTTTTATATATAT+AGG | + | Chr1:99366178-99366197 | MsG0180006048.01.T01:intron | 15.0% |
!! | AGACAAATTCAAATCAAAAT+AGG | + | Chr1:99368523-99368542 | MsG0180006048.01.T01:intron | 20.0% |
!! | AGATGAATTAGTTGAAAAAT+AGG | - | Chr1:99366566-99366585 | None:intergenic | 20.0% |
!! | AGTCACTATATCAATATATA+TGG | - | Chr1:99366627-99366646 | None:intergenic | 20.0% |
!! | ATATATAGGTATCTTGAATT+GGG | + | Chr1:99366192-99366211 | MsG0180006048.01.T01:intron | 20.0% |
!! | TATAAGTAGGTAGATATAAA+TGG | + | Chr1:99366767-99366786 | MsG0180006048.01.T01:intron | 20.0% |
!! | TATATATAGGTATCTTGAAT+TGG | + | Chr1:99366191-99366210 | MsG0180006048.01.T01:intron | 20.0% |
!!! | AAGTTAAGAAATTGATTCTA+AGG | - | Chr1:99368487-99368506 | None:intergenic | 20.0% |
!!! | TAAGATCATGTTAATTTTGA+TGG | + | Chr1:99367019-99367038 | MsG0180006048.01.T01:intron | 20.0% |
!!! | TAATTGTGATGTTAATTTGT+TGG | + | Chr1:99366163-99366182 | MsG0180006048.01.T01:intron | 20.0% |
!!! | TGAATTATTATCAAGGTTTT+TGG | + | Chr1:99367084-99367103 | MsG0180006048.01.T01:intron | 20.0% |
!!! | TTTTTCAACTAATTCATCTT+TGG | + | Chr1:99366567-99366586 | MsG0180006048.01.T01:intron | 20.0% |
! | AAGGATTATAGATAGAGTAA+AGG | - | Chr1:99366422-99366441 | None:intergenic | 25.0% |
! | AGGATTATAGATAGAGTAAA+GGG | - | Chr1:99366421-99366440 | None:intergenic | 25.0% |
! | GCTTAATTTACATATTGAAC+TGG | + | Chr1:99366859-99366878 | MsG0180006048.01.T01:intron | 25.0% |
! | TAGAAAACACACATATAAGT+AGG | + | Chr1:99366754-99366773 | MsG0180006048.01.T01:intron | 25.0% |
! | TATATATACCCTGAATCTAT+AGG | - | Chr1:99366357-99366376 | None:intergenic | 25.0% |
! | TATATGGAATTAGCTGAAAA+AGG | - | Chr1:99366611-99366630 | None:intergenic | 25.0% |
! | TTCTCTGTGTATAATATAAC+AGG | + | Chr1:99367259-99367278 | MsG0180006048.01.T01:intron | 25.0% |
!! | TTTTGCAGGAAACAATTAAT+GGG | + | Chr1:99366649-99366668 | MsG0180006048.01.T01:intron | 25.0% |
!! | TTTTTGCAGGAAACAATTAA+TGG | + | Chr1:99366648-99366667 | MsG0180006048.01.T01:intron | 25.0% |
!!! | CTCAAATGTTTTTAAAGTTG+AGG | + | Chr1:99368455-99368474 | MsG0180006048.01.T01:CDS | 25.0% |
AGATGCTATTGAATTTGTGA+AGG | + | Chr1:99367925-99367944 | MsG0180006048.01.T01:CDS | 30.0% | |
AGTAACTGTGTATATGTTGA+TGG | + | Chr1:99368013-99368032 | MsG0180006048.01.T01:CDS | 30.0% | |
ATTATAGATAGAGTAAAGGG+AGG | - | Chr1:99366418-99366437 | None:intergenic | 30.0% | |
CACATGAATATGAATATTGC+AGG | + | Chr1:99368278-99368297 | MsG0180006048.01.T01:intron | 30.0% | |
CACTTTACATGTAAGTTCAT+TGG | + | Chr1:99366530-99366549 | MsG0180006048.01.T01:intron | 30.0% | |
CTGTGTATAATATAACAGGT+TGG | + | Chr1:99367263-99367282 | MsG0180006048.01.T01:intron | 30.0% | |
CTGTTCAATGAAGAGATTAA+AGG | - | Chr1:99366441-99366460 | None:intergenic | 30.0% | |
CTTTAATCTCTTCATTGAAC+AGG | + | Chr1:99366439-99366458 | MsG0180006048.01.T01:intron | 30.0% | |
GGAAATTAAGTGAAGATCAA+AGG | + | Chr1:99366061-99366080 | MsG0180006048.01.T01:CDS | 30.0% | |
GGTCTAATTATGATGTTGAA+GGG | - | Chr1:99366955-99366974 | None:intergenic | 30.0% | |
GTTATATAACCTTCGTTCAT+TGG | + | Chr1:99367862-99367881 | MsG0180006048.01.T01:CDS | 30.0% | |
TATTAACTAACCAACCCAAT+TGG | + | Chr1:99366478-99366497 | MsG0180006048.01.T01:CDS | 30.0% | |
TCATGTTTCAAAACAAAAGC+AGG | + | Chr1:99368096-99368115 | MsG0180006048.01.T01:CDS | 30.0% | |
TGATCTTGATGTTGTTAACT+GGG | - | Chr1:99366978-99366997 | None:intergenic | 30.0% | |
TTATAGATAGAGTAAAGGGA+GGG | - | Chr1:99366417-99366436 | None:intergenic | 30.0% | |
TTCAATACAGATATGTCATG+TGG | - | Chr1:99367473-99367492 | None:intergenic | 30.0% | |
TTGAATTGAAACCAATTGAG+TGG | - | Chr1:99367358-99367377 | None:intergenic | 30.0% | |
! | GAACTTACATGTAAAGTGTT+TGG | - | Chr1:99366528-99366547 | None:intergenic | 30.0% |
!! | AAGAGGATGATGGAAAATAT+AGG | + | Chr1:99367765-99367784 | MsG0180006048.01.T01:CDS | 30.0% |
!! | TATAAAAGCGTCAAAGATGT+TGG | - | Chr1:99367137-99367156 | None:intergenic | 30.0% |
!!! | GATATAGTGACTATTTTTGC+AGG | + | Chr1:99366635-99366654 | MsG0180006048.01.T01:intron | 30.0% |
!!! | GCTTCTTTTTTGTGTCTAAT+GGG | - | Chr1:99367688-99367707 | None:intergenic | 30.0% |
!!! | TGCTTCTTTTTTGTGTCTAA+TGG | - | Chr1:99367689-99367708 | None:intergenic | 30.0% |
AAACAAAAGCAGGAAGATGT+TGG | + | Chr1:99368106-99368125 | MsG0180006048.01.T01:CDS | 35.0% | |
AAAGGAGAGTGAAATAGTTG+AGG | + | Chr1:99368606-99368625 | MsG0180006048.01.T01:CDS | 35.0% | |
AAGAAGCAAGAACATGTTGT+TGG | + | Chr1:99367701-99367720 | MsG0180006048.01.T01:CDS | 35.0% | |
AATGTTCCAAAAGCAGAACA+TGG | + | Chr1:99368070-99368089 | MsG0180006048.01.T01:CDS | 35.0% | |
ACTTCCATACCTATAGATTC+AGG | + | Chr1:99366345-99366364 | MsG0180006048.01.T01:CDS | 35.0% | |
ATACCCTGAATCTATAGGTA+TGG | - | Chr1:99366352-99366371 | None:intergenic | 35.0% | |
ATCAATTTCACAAAACCACC+TGG | - | Chr1:99368369-99368388 | None:intergenic | 35.0% | |
ATCTTGATGTTGTTAACTGG+GGG | - | Chr1:99366976-99366995 | None:intergenic | 35.0% | |
ATGCAATCGAATCCAATTGT+GGG | + | Chr1:99367386-99367405 | MsG0180006048.01.T01:CDS | 35.0% | |
ATTGGGATAGTTCAACCAAT+TGG | - | Chr1:99366496-99366515 | None:intergenic | 35.0% | |
ATTGTGGGTGATGAAAATGA+TGG | + | Chr1:99367401-99367420 | MsG0180006048.01.T01:CDS | 35.0% | |
CTTCCATACCTATAGATTCA+GGG | + | Chr1:99366346-99366365 | MsG0180006048.01.T01:CDS | 35.0% | |
CTTGATAGAGCTTCTATTCT+TGG | + | Chr1:99367902-99367921 | MsG0180006048.01.T01:CDS | 35.0% | |
GAAGGAAGAAACTGAATGAT+AGG | + | Chr1:99367840-99367859 | MsG0180006048.01.T01:CDS | 35.0% | |
GATCATGAAGAAAAGAACCT+TGG | - | Chr1:99367574-99367593 | None:intergenic | 35.0% | |
GATCTTGATGTTGTTAACTG+GGG | - | Chr1:99366977-99366996 | None:intergenic | 35.0% | |
GATTCAATGTGTCTGATGAA+TGG | - | Chr1:99367448-99367467 | None:intergenic | 35.0% | |
GGAAAATATAGGAGAAGAAG+TGG | + | Chr1:99367776-99367795 | MsG0180006048.01.T01:CDS | 35.0% | |
GGGTCTAATTATGATGTTGA+AGG | - | Chr1:99366956-99366975 | None:intergenic | 35.0% | |
GTGATCTTGATGTTGTTAAC+TGG | - | Chr1:99366979-99366998 | None:intergenic | 35.0% | |
TATAGGAGAAGAAGTGGAAA+AGG | + | Chr1:99367782-99367801 | MsG0180006048.01.T01:CDS | 35.0% | |
TGAATCTATAGGTATGGAAG+TGG | - | Chr1:99366346-99366365 | None:intergenic | 35.0% | |
TGAGCTCTTTGTAACTAAAC+AGG | + | Chr1:99366707-99366726 | MsG0180006048.01.T01:CDS | 35.0% | |
TTGGGATAGTTCAACCAATT+GGG | - | Chr1:99366495-99366514 | None:intergenic | 35.0% | |
TTTAGGCAAAACTGCATCAA+AGG | - | Chr1:99367222-99367241 | None:intergenic | 35.0% | |
! | AGATCACAAGAGTTTGTTCT+TGG | - | Chr1:99366309-99366328 | None:intergenic | 35.0% |
! | GATCACAAGAGTTTGTTCTT+GGG | - | Chr1:99366308-99366327 | None:intergenic | 35.0% |
! | TCATTTTCATCACCCACAAT+TGG | - | Chr1:99367401-99367420 | None:intergenic | 35.0% |
! | TGAAATCCATGTTCTGCTTT+TGG | - | Chr1:99368079-99368098 | None:intergenic | 35.0% |
!! | CTATCAAGCTTTGAGATTCT+TGG | - | Chr1:99367890-99367909 | None:intergenic | 35.0% |
!!! | AGGTGGTTTTGTGAAATTGA+TGG | + | Chr1:99368368-99368387 | MsG0180006048.01.T01:CDS | 35.0% |
!!! | TGGTTTTGTGAAATTGATGG+AGG | + | Chr1:99368371-99368390 | MsG0180006048.01.T01:CDS | 35.0% |
AACAACGAAACCTTCTCTGA+AGG | + | Chr1:99367545-99367564 | MsG0180006048.01.T01:CDS | 40.0% | |
AATTGGGATGTTGTTGTGGT+GGG | + | Chr1:99366208-99366227 | MsG0180006048.01.T01:CDS | 40.0% | |
AGAGCTTCAAGATGAACTTG+AGG | + | Chr1:99367967-99367986 | MsG0180006048.01.T01:CDS | 40.0% | |
AGGTATGGAAGTGGAAAGTT+GGG | - | Chr1:99366337-99366356 | None:intergenic | 40.0% | |
AGTGAAAGCAACCAAAATGG+TGG | + | Chr1:99366231-99366250 | MsG0180006048.01.T01:CDS | 40.0% | |
AGTGTTTGGATCCAAGCTAT+TGG | - | Chr1:99366514-99366533 | None:intergenic | 40.0% | |
ATCTCAATGCATTGTCATGG+TGG | + | Chr1:99367316-99367335 | MsG0180006048.01.T01:CDS | 40.0% | |
ATGAATATTGCAGGCACAAG+TGG | + | Chr1:99368287-99368306 | MsG0180006048.01.T01:intron | 40.0% | |
ATTCACTACTAGAGCTGACA+CGG | + | Chr1:99368644-99368663 | MsG0180006048.01.T01:CDS | 40.0% | |
ATTGAACAGGATTCATGCAC+AGG | + | Chr1:99366452-99366471 | MsG0180006048.01.T01:intron | 40.0% | |
CAAATCTTCATGCTGGAACT+TGG | + | Chr1:99368669-99368688 | MsG0180006048.01.T01:CDS | 40.0% | |
CACATCTCAATGCATTGTCA+TGG | + | Chr1:99367313-99367332 | MsG0180006048.01.T01:CDS | 40.0% | |
CAGAATGAAGAAGAGGATGA+TGG | + | Chr1:99367755-99367774 | MsG0180006048.01.T01:CDS | 40.0% | |
CAGCAACAAGGTTCTTTGAT+TGG | - | Chr1:99367811-99367830 | None:intergenic | 40.0% | |
CAGTGATCAGAATGAAGAAG+AGG | + | Chr1:99367748-99367767 | MsG0180006048.01.T01:CDS | 40.0% | |
CATGCAATCGAATCCAATTG+TGG | + | Chr1:99367385-99367404 | MsG0180006048.01.T01:CDS | 40.0% | |
CTTGAATTGGGATGTTGTTG+TGG | + | Chr1:99366204-99366223 | MsG0180006048.01.T01:CDS | 40.0% | |
CTTGAGGAAAATTCAGACAC+AGG | + | Chr1:99367983-99368002 | MsG0180006048.01.T01:CDS | 40.0% | |
GAGAGATTAAGACCTCTTGT+TGG | + | Chr1:99366009-99366028 | MsG0180006048.01.T01:CDS | 40.0% | |
GATAGTTCAACCAATTGGGT+TGG | - | Chr1:99366491-99366510 | None:intergenic | 40.0% | |
GTGTTTGGATCCAAGCTATT+GGG | - | Chr1:99366513-99366532 | None:intergenic | 40.0% | |
GTTGAACTATCCCAATAGCT+TGG | + | Chr1:99366500-99366519 | MsG0180006048.01.T01:CDS | 40.0% | |
TACATGAAGAGACAGGGAAA+AGG | - | Chr1:99366266-99366285 | None:intergenic | 40.0% | |
TAGGTATGGAAGTGGAAAGT+TGG | - | Chr1:99366338-99366357 | None:intergenic | 40.0% | |
TATCCCTACATGAAGAGACA+GGG | - | Chr1:99366272-99366291 | None:intergenic | 40.0% | |
TCTCAAATCCAACACAGAAG+AGG | + | Chr1:99367610-99367629 | MsG0180006048.01.T01:CDS | 40.0% | |
TGGGAATGAGTACTTTGTGA+AGG | + | Chr1:99368326-99368345 | MsG0180006048.01.T01:CDS | 40.0% | |
TTCTTGGAACCAATGAACGA+AGG | - | Chr1:99367874-99367893 | None:intergenic | 40.0% | |
TTTCCCTGTCTCTTCATGTA+GGG | + | Chr1:99366266-99366285 | MsG0180006048.01.T01:CDS | 40.0% | |
! | TTTTCCCTGTCTCTTCATGT+AGG | + | Chr1:99366265-99366284 | MsG0180006048.01.T01:CDS | 40.0% |
!! | AGACCTCTTGTTGGTTTGAA+TGG | + | Chr1:99366018-99366037 | MsG0180006048.01.T01:CDS | 40.0% |
!! | AGGCACTGGAATCAAAACAT+GGG | - | Chr1:99366676-99366695 | None:intergenic | 40.0% |
!! | ATGGAGGCTTTGAACACTTT+AGG | + | Chr1:99368387-99368406 | MsG0180006048.01.T01:CDS | 40.0% |
!! | ATTGTCATGGTGGATCAAGA+AGG | + | Chr1:99367326-99367345 | MsG0180006048.01.T01:CDS | 40.0% |
!! | TCTTGTTGGTTTGAATGGCT+GGG | + | Chr1:99366023-99366042 | MsG0180006048.01.T01:CDS | 40.0% |
!! | TTGTCATGGTGGATCAAGAA+GGG | + | Chr1:99367327-99367346 | MsG0180006048.01.T01:CDS | 40.0% |
ACCTTGGTATCCTTCAGAGA+AGG | - | Chr1:99367558-99367577 | None:intergenic | 45.0% | |
ATCATGCACCTCTTCTGTGT+TGG | - | Chr1:99367621-99367640 | None:intergenic | 45.0% | |
CAAAGAACCTTGTTGCTGAG+AGG | + | Chr1:99367813-99367832 | MsG0180006048.01.T01:CDS | 45.0% | |
CACGGAACAAATCTTCATGC+TGG | + | Chr1:99368662-99368681 | MsG0180006048.01.T01:CDS | 45.0% | |
CAGCCATTCAAACCAACAAG+AGG | - | Chr1:99366024-99366043 | None:intergenic | 45.0% | |
GAAGGGATGAACCACTCAAT+TGG | + | Chr1:99367344-99367363 | MsG0180006048.01.T01:CDS | 45.0% | |
GAATTGGGATGTTGTTGTGG+TGG | + | Chr1:99366207-99366226 | MsG0180006048.01.T01:CDS | 45.0% | |
GGGAGTGAAAGCAACCAAAA+TGG | + | Chr1:99366228-99366247 | MsG0180006048.01.T01:CDS | 45.0% | |
GTATCCCTACATGAAGAGAC+AGG | - | Chr1:99366273-99366292 | None:intergenic | 45.0% | |
TGACAAACAGACACAGCAGA+TGG | + | Chr1:99368138-99368157 | MsG0180006048.01.T01:CDS | 45.0% | |
TGGAAGTGGCTCAGATAGAT+GGG | + | Chr1:99368307-99368326 | MsG0180006048.01.T01:CDS | 45.0% | |
TTCTCTTCCTCTCAGCAACA+AGG | - | Chr1:99367823-99367842 | None:intergenic | 45.0% | |
TTGTTGCTGAGAGGAAGAGA+AGG | + | Chr1:99367822-99367841 | MsG0180006048.01.T01:CDS | 45.0% | |
! | ACCTTCTCTGAAGGATACCA+AGG | + | Chr1:99367554-99367573 | MsG0180006048.01.T01:CDS | 45.0% |
! | GGTGTTCTTCTCCACCATTT+TGG | - | Chr1:99366245-99366264 | None:intergenic | 45.0% |
!! | CAGGCACTGGAATCAAAACA+TGG | - | Chr1:99366677-99366696 | None:intergenic | 45.0% |
!! | CTCTTGTTGGTTTGAATGGC+TGG | + | Chr1:99366022-99366041 | MsG0180006048.01.T01:CDS | 45.0% |
!! | GGCTTTGAACACTTTAGGCA+TGG | + | Chr1:99368392-99368411 | MsG0180006048.01.T01:CDS | 45.0% |
!!! | CATGTTTTGATTCCAGTGCC+TGG | + | Chr1:99366675-99366694 | MsG0180006048.01.T01:CDS | 45.0% |
!!! | TGAAGGTGTTTTGTGAGCAC+AGG | + | Chr1:99368343-99368362 | MsG0180006048.01.T01:CDS | 45.0% |
!!! | TTGTTATTATTATTATTATT+TGG | - | Chr1:99368052-99368071 | None:intergenic | 5.0% |
ATTGCAGGCACAAGTGGAAG+TGG | + | Chr1:99368293-99368312 | MsG0180006048.01.T01:intron | 50.0% | |
CAAACAGACACAGCAGATGG+AGG | + | Chr1:99368141-99368160 | MsG0180006048.01.T01:CDS | 50.0% | |
GCCACAGTAACCAGTCACAA+GGG | + | Chr1:99368426-99368445 | MsG0180006048.01.T01:CDS | 50.0% | |
GCTGGGATTACTGTGTCTAC+TGG | + | Chr1:99366040-99366059 | MsG0180006048.01.T01:CDS | 50.0% | |
GTGGAAGTGGCTCAGATAGA+TGG | + | Chr1:99368306-99368325 | MsG0180006048.01.T01:CDS | 50.0% | |
TGAGACAAGACCCTTGTGAC+TGG | - | Chr1:99368439-99368458 | None:intergenic | 50.0% | |
TGCCACAGTAACCAGTCACA+AGG | + | Chr1:99368425-99368444 | MsG0180006048.01.T01:CDS | 50.0% | |
! | ACCCTTGTGACTGGTTACTG+TGG | - | Chr1:99368430-99368449 | None:intergenic | 50.0% |
!!! | GTTTTGATTCCAGTGCCTGG+TGG | + | Chr1:99366678-99366697 | MsG0180006048.01.T01:CDS | 50.0% |
AAGAGCTCAACCAGTCCACC+AGG | - | Chr1:99366696-99366715 | None:intergenic | 55.0% | |
! | GTGTTTTGTGAGCACAGGCC+AGG | + | Chr1:99368348-99368367 | MsG0180006048.01.T01:CDS | 55.0% |
! | TTTTGTGAGCACAGGCCAGG+TGG | + | Chr1:99368351-99368370 | MsG0180006048.01.T01:CDS | 55.0% |
TCAACCAGTCCACCAGGCAC+TGG | - | Chr1:99366690-99366709 | None:intergenic | 60.0% | |
! | GATTCCAGTGCCTGGTGGAC+TGG | + | Chr1:99366683-99366702 | MsG0180006048.01.T01:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr1 | gene | 99365979 | 99368699 | 99365979 | ID=MsG0180006048.01;Name=MsG0180006048.01 |
Chr1 | mRNA | 99365979 | 99368699 | 99365979 | ID=MsG0180006048.01.T01;Parent=MsG0180006048.01;Name=MsG0180006048.01.T01;_AED=0.11;_eAED=0.11;_QI=0|0|0|1|1|1|7|0|525 |
Chr1 | exon | 99365979 | 99366082 | 99365979 | ID=MsG0180006048.01.T01:exon:1911;Parent=MsG0180006048.01.T01 |
Chr1 | exon | 99366200 | 99366367 | 99366200 | ID=MsG0180006048.01.T01:exon:1912;Parent=MsG0180006048.01.T01 |
Chr1 | exon | 99366461 | 99366539 | 99366461 | ID=MsG0180006048.01.T01:exon:1913;Parent=MsG0180006048.01.T01 |
Chr1 | exon | 99366657 | 99366728 | 99366657 | ID=MsG0180006048.01.T01:exon:1914;Parent=MsG0180006048.01.T01 |
Chr1 | exon | 99367281 | 99368162 | 99367281 | ID=MsG0180006048.01.T01:exon:1915;Parent=MsG0180006048.01.T01 |
Chr1 | exon | 99368300 | 99368476 | 99368300 | ID=MsG0180006048.01.T01:exon:1916;Parent=MsG0180006048.01.T01 |
Chr1 | exon | 99368604 | 99368699 | 99368604 | ID=MsG0180006048.01.T01:exon:1917;Parent=MsG0180006048.01.T01 |
Chr1 | CDS | 99365979 | 99366082 | 99365979 | ID=MsG0180006048.01.T01:cds;Parent=MsG0180006048.01.T01 |
Chr1 | CDS | 99366200 | 99366367 | 99366200 | ID=MsG0180006048.01.T01:cds;Parent=MsG0180006048.01.T01 |
Chr1 | CDS | 99366461 | 99366539 | 99366461 | ID=MsG0180006048.01.T01:cds;Parent=MsG0180006048.01.T01 |
Chr1 | CDS | 99366657 | 99366728 | 99366657 | ID=MsG0180006048.01.T01:cds;Parent=MsG0180006048.01.T01 |
Chr1 | CDS | 99367281 | 99368162 | 99367281 | ID=MsG0180006048.01.T01:cds;Parent=MsG0180006048.01.T01 |
Chr1 | CDS | 99368300 | 99368476 | 99368300 | ID=MsG0180006048.01.T01:cds;Parent=MsG0180006048.01.T01 |
Chr1 | CDS | 99368604 | 99368699 | 99368604 | ID=MsG0180006048.01.T01:cds;Parent=MsG0180006048.01.T01 |
Gene Sequence |
Protein sequence |