AlfalfaGEDB | MsG0280007251.01

M. sativa cultivar ZhongmuNo.1 / MsG0280007251.01

KEGG: K08066
GO: GO:0046982
PFAM: PF00808

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280007251.01.T02	XP_013462829.1	92.308	117	9	0	14	130	66	182	3.19E-73	229
MsG0280007251.01.T01	XP_013462829.1	77.419	155	24	2	1	149	95	244	1.05E-75	236
MsG0280007251.01.T05	XP_013462829.1	95.161	62	3	0	1	62	121	182	3.07E-33	124
MsG0280007251.01.T04	XP_013462829.1	95.455	88	4	0	1	88	95	182	1.23E-52	175
MsG0280007251.01.T03	XP_013462829.1	92.308	117	9	0	10	126	66	182	3.27E-73	229

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280007251.01.T01	Q9SMP0	50.42	119	51	2	1	114	75	190	5.84E-34	121
MsG0280007251.01.T02	Q8LCG7	54.478	134	53	1	12	145	55	180	2.74E-46	152
MsG0280007251.01.T03	Q8LCG7	54.478	134	53	1	8	141	55	180	2.78E-46	152
MsG0280007251.01.T04	Q655V5	57.778	90	36	1	1	90	111	198	3.98E-31	113
MsG0280007251.01.T05	Q655V5	51.562	64	29	1	1	64	137	198	5.54E-16	72.8

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280007251.01.T01	I3TAY7	77.419	155	24	2	1	149	95	244	5.01e-76	236
MsG0280007251.01.T02	I3TAY7	92.308	117	9	0	14	130	66	182	1.52e-73	229
MsG0280007251.01.T03	I3TAY7	92.308	117	9	0	10	126	66	182	1.56e-73	229
MsG0280007251.01.T04	I3TAY7	95.455	88	4	0	1	88	95	182	5.86e-53	175
MsG0280007251.01.T05	I3TAY7	95.161	62	3	0	1	62	121	182	1.47e-33	124

TFs/TRs:

Gene ID	Type	Classification
MsG0280007251.01.T03	TF	NF-YC
MsG0280007251.01.T04	TF	NF-YC

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280007251.01.T02	MTR_2g023340	92.308	117	9	0	14	130	66	182	3.87e-77	229
MsG0280007251.01.T02	MTR_1g082660	59.664	119	46	2	14	132	82	198	1.24e-48	157
MsG0280007251.01.T02	MTR_7g113680	53.623	138	60	3	14	149	133	268	3.04e-47	155
MsG0280007251.01.T02	MTR_3g099180	65.657	99	34	0	15	113	37	135	2.33e-44	145
MsG0280007251.01.T02	MTR_3g099180	65.657	99	34	0	15	113	37	135	2.70e-44	145
MsG0280007251.01.T02	MTR_2g081600	51.648	91	43	1	32	121	21	111	2.05e-24	91.3
MsG0280007251.01.T02	MTR_2g081630	58.228	79	32	1	32	109	21	99	2.52e-24	91.3
MsG0280007251.01.T02	MTR_3g012030	42.308	78	45	0	34	111	9	86	2.27e-12	63.2
MsG0280007251.01.T02	MTR_8g041420	39.744	78	47	0	34	111	9	86	9.45e-12	61.6
MsG0280007251.01.T01	MTR_2g023340	77.419	155	24	2	1	149	95	244	1.27e-79	236
MsG0280007251.01.T01	MTR_7g113680	46.099	141	64	4	1	132	162	299	7.71e-34	120
MsG0280007251.01.T01	MTR_1g082660	47.761	134	53	5	1	125	111	236	2.00e-33	118
MsG0280007251.01.T01	MTR_3g099180	50.435	115	50	2	1	114	65	173	1.02e-30	110
MsG0280007251.01.T01	MTR_3g099180	50.435	115	50	2	1	114	65	173	1.04e-30	110
MsG0280007251.01.T01	MTR_2g081600	53.030	66	31	0	3	68	35	100	2.73e-18	75.9
MsG0280007251.01.T01	MTR_2g081630	53.030	66	31	0	3	68	35	100	2.89e-18	75.5
MsG0280007251.01.T05	MTR_2g023340	95.161	62	3	0	1	62	121	182	3.72e-37	124
MsG0280007251.01.T05	MTR_1g082660	53.125	64	28	2	1	64	137	198	1.08e-17	74.7
MsG0280007251.01.T05	MTR_7g113680	56.140	57	24	1	1	57	188	243	4.27e-17	73.6
MsG0280007251.01.T05	MTR_3g099180	60.000	45	18	0	1	45	91	135	2.17e-14	65.1
MsG0280007251.01.T05	MTR_3g099180	60.000	45	18	0	1	45	91	135	2.30e-14	65.1
MsG0280007251.01.T04	MTR_2g023340	95.455	88	4	0	1	88	95	182	1.49e-56	175
MsG0280007251.01.T04	MTR_1g082660	58.889	90	35	2	1	90	111	198	5.11e-33	115
MsG0280007251.01.T04	MTR_7g113680	51.376	109	49	3	1	107	162	268	6.96e-32	114
MsG0280007251.01.T04	MTR_3g099180	67.606	71	23	0	1	71	65	135	1.22e-30	108
MsG0280007251.01.T04	MTR_3g099180	67.606	71	23	0	1	71	65	135	1.32e-30	108
MsG0280007251.01.T04	MTR_2g081630	53.846	65	30	0	3	67	35	99	4.44e-18	73.6
MsG0280007251.01.T04	MTR_2g081600	46.753	77	41	0	3	79	35	111	4.47e-18	73.6
MsG0280007251.01.T03	MTR_2g023340	92.308	117	9	0	10	126	66	182	3.97e-77	229
MsG0280007251.01.T03	MTR_1g082660	59.664	119	46	2	10	128	82	198	1.38e-48	157
MsG0280007251.01.T03	MTR_7g113680	53.623	138	60	3	10	145	133	268	2.95e-47	155
MsG0280007251.01.T03	MTR_3g099180	65.657	99	34	0	11	109	37	135	2.11e-44	145
MsG0280007251.01.T03	MTR_3g099180	65.657	99	34	0	11	109	37	135	2.19e-44	145
MsG0280007251.01.T03	MTR_2g081600	51.648	91	43	1	28	117	21	111	2.28e-24	91.3
MsG0280007251.01.T03	MTR_2g081630	58.228	79	32	1	28	105	21	99	2.36e-24	90.9
MsG0280007251.01.T03	MTR_3g012030	42.308	78	45	0	30	107	9	86	2.14e-12	63.2
MsG0280007251.01.T03	MTR_8g041420	39.744	78	47	0	30	107	9	86	8.64e-12	61.6

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280007251.01.T02	AT1G56170	54.478	134	53	1	12	145	55	180	2.80e-47	152
MsG0280007251.01.T02	AT1G56170	54.478	134	53	1	12	145	55	180	2.80e-47	152
MsG0280007251.01.T02	AT1G08970	51.974	152	53	3	15	148	62	211	4.36e-47	152
MsG0280007251.01.T02	AT1G08970	51.974	152	53	3	15	148	62	211	4.36e-47	152
MsG0280007251.01.T02	AT1G08970	51.974	152	53	3	15	148	62	211	4.36e-47	152
MsG0280007251.01.T02	AT1G08970	51.974	152	53	3	15	148	62	211	4.36e-47	152
MsG0280007251.01.T02	AT1G54830	64.220	109	37	1	14	122	51	157	2.52e-46	150
MsG0280007251.01.T02	AT1G54830	64.220	109	37	1	14	122	51	157	2.52e-46	150
MsG0280007251.01.T02	AT1G54830	64.220	109	37	1	14	122	51	157	2.52e-46	150
MsG0280007251.01.T02	AT3G48590	57.025	121	47	1	15	130	47	167	7.29e-45	147
MsG0280007251.01.T02	AT5G63470	63.462	104	38	0	15	118	60	163	1.84e-44	146
MsG0280007251.01.T02	AT5G63470	63.462	104	38	0	15	118	60	163	1.84e-44	146
MsG0280007251.01.T02	AT5G50480	46.939	147	66	3	11	148	35	178	5.22e-39	131
MsG0280007251.01.T02	AT5G27910	53.061	98	43	1	10	107	16	110	1.24e-31	112
MsG0280007251.01.T02	AT5G50490	42.857	112	61	1	2	113	8	116	8.46e-28	102
MsG0280007251.01.T02	AT5G50470	38.168	131	72	2	10	134	43	170	4.59e-25	95.9
MsG0280007251.01.T02	AT5G38140	39.806	103	60	1	8	110	44	144	1.32e-22	89.0
MsG0280007251.01.T01	AT3G48590	50.420	119	51	2	1	114	75	190	5.95e-35	121
MsG0280007251.01.T01	AT5G63470	49.231	130	55	2	1	122	88	214	1.06e-33	119
MsG0280007251.01.T01	AT5G63470	49.231	130	55	2	1	122	88	214	1.06e-33	119
MsG0280007251.01.T01	AT1G54830	50.833	120	54	3	1	117	80	197	4.24e-33	116
MsG0280007251.01.T01	AT1G54830	50.833	120	54	3	1	117	80	197	4.24e-33	116
MsG0280007251.01.T01	AT1G54830	50.833	120	54	3	1	117	80	197	4.24e-33	116
MsG0280007251.01.T01	AT1G08970	52.381	126	48	3	1	118	90	211	5.15e-33	116
MsG0280007251.01.T01	AT1G08970	52.381	126	48	3	1	118	90	211	5.15e-33	116
MsG0280007251.01.T01	AT1G08970	52.381	126	48	3	1	118	90	211	5.15e-33	116
MsG0280007251.01.T01	AT1G08970	52.381	126	48	3	1	118	90	211	5.15e-33	116
MsG0280007251.01.T01	AT1G56170	63.636	77	28	0	1	77	86	162	5.37e-31	110
MsG0280007251.01.T01	AT1G56170	63.636	77	28	0	1	77	86	162	5.37e-31	110
MsG0280007251.01.T01	AT5G50480	48.276	116	50	3	1	114	64	171	7.54e-30	107
MsG0280007251.01.T01	AT5G27910	44.828	116	44	4	1	111	46	146	5.16e-22	87.0
MsG0280007251.01.T01	AT5G50490	50.704	71	35	0	1	71	46	116	8.00e-19	79.0
MsG0280007251.01.T01	AT5G50470	38.793	116	61	3	1	106	73	188	6.40e-17	74.3
MsG0280007251.01.T01	AT5G38140	42.647	68	39	0	1	68	77	144	3.45e-15	69.7
MsG0280007251.01.T05	AT1G08970	62.069	58	19	2	1	57	116	171	1.44e-16	71.2
MsG0280007251.01.T05	AT1G08970	62.069	58	19	2	1	57	116	171	1.44e-16	71.2
MsG0280007251.01.T05	AT1G08970	62.069	58	19	2	1	57	116	171	1.44e-16	71.2
MsG0280007251.01.T05	AT1G08970	62.069	58	19	2	1	57	116	171	1.44e-16	71.2
MsG0280007251.01.T05	AT1G56170	48.571	70	28	1	1	70	112	173	6.49e-16	68.9
MsG0280007251.01.T05	AT1G56170	48.571	70	28	1	1	70	112	173	6.49e-16	68.9
MsG0280007251.01.T05	AT1G54830	61.111	54	19	1	1	54	106	157	6.62e-16	69.3
MsG0280007251.01.T05	AT1G54830	61.111	54	19	1	1	54	106	157	6.62e-16	69.3
MsG0280007251.01.T05	AT1G54830	61.111	54	19	1	1	54	106	157	6.62e-16	69.3
MsG0280007251.01.T05	AT5G63470	58.000	50	21	0	1	50	114	163	1.44e-15	68.9
MsG0280007251.01.T05	AT5G63470	58.000	50	21	0	1	50	114	163	1.44e-15	68.9
MsG0280007251.01.T05	AT3G48590	47.761	67	30	1	1	62	101	167	2.22e-15	68.2
MsG0280007251.01.T05	AT5G50480	37.079	89	47	2	1	80	90	178	4.98e-13	61.6
MsG0280007251.01.T04	AT1G08970	65.476	84	26	2	1	83	90	171	4.42e-32	112
MsG0280007251.01.T04	AT1G08970	65.476	84	26	2	1	83	90	171	4.42e-32	112
MsG0280007251.01.T04	AT1G08970	65.476	84	26	2	1	83	90	171	4.42e-32	112
MsG0280007251.01.T04	AT1G08970	65.476	84	26	2	1	83	90	171	4.42e-32	112
MsG0280007251.01.T04	AT1G56170	53.398	103	40	1	1	103	86	180	4.52e-32	111
MsG0280007251.01.T04	AT1G56170	53.398	103	40	1	1	103	86	180	4.52e-32	111
MsG0280007251.01.T04	AT1G54830	65.000	80	26	1	1	80	80	157	1.83e-31	110
MsG0280007251.01.T04	AT1G54830	65.000	80	26	1	1	80	80	157	1.83e-31	110
MsG0280007251.01.T04	AT1G54830	65.000	80	26	1	1	80	80	157	1.83e-31	110
MsG0280007251.01.T04	AT3G48590	56.989	93	35	1	1	88	75	167	2.47e-31	110
MsG0280007251.01.T04	AT5G63470	65.789	76	26	0	1	76	88	163	3.02e-31	110
MsG0280007251.01.T04	AT5G63470	65.789	76	26	0	1	76	88	163	3.02e-31	110
MsG0280007251.01.T04	AT5G50480	45.217	115	54	2	1	106	64	178	3.46e-28	102
MsG0280007251.01.T04	AT5G27910	55.385	65	29	0	1	65	46	110	6.09e-20	80.1
MsG0280007251.01.T04	AT5G50490	50.704	71	35	0	1	71	46	116	1.12e-19	79.7
MsG0280007251.01.T04	AT5G50470	39.796	98	53	1	1	92	73	170	8.10e-18	75.1
MsG0280007251.01.T04	AT5G38140	42.647	68	39	0	1	68	77	144	4.33e-15	67.8
MsG0280007251.01.T03	AT1G56170	54.478	134	53	1	8	141	55	180	2.83e-47	152
MsG0280007251.01.T03	AT1G56170	54.478	134	53	1	8	141	55	180	2.83e-47	152
MsG0280007251.01.T03	AT1G08970	51.974	152	53	3	11	144	62	211	5.37e-47	152
MsG0280007251.01.T03	AT1G08970	51.974	152	53	3	11	144	62	211	5.37e-47	152
MsG0280007251.01.T03	AT1G08970	51.974	152	53	3	11	144	62	211	5.37e-47	152
MsG0280007251.01.T03	AT1G08970	51.974	152	53	3	11	144	62	211	5.37e-47	152
MsG0280007251.01.T03	AT1G54830	64.220	109	37	1	10	118	51	157	2.47e-46	150
MsG0280007251.01.T03	AT1G54830	64.220	109	37	1	10	118	51	157	2.47e-46	150
MsG0280007251.01.T03	AT1G54830	64.220	109	37	1	10	118	51	157	2.47e-46	150
MsG0280007251.01.T03	AT3G48590	57.025	121	47	1	11	126	47	167	6.78e-45	147
MsG0280007251.01.T03	AT5G63470	63.462	104	38	0	11	114	60	163	1.29e-44	147
MsG0280007251.01.T03	AT5G63470	63.462	104	38	0	11	114	60	163	1.29e-44	147
MsG0280007251.01.T03	AT5G50480	46.939	147	66	3	7	144	35	178	6.04e-39	130
MsG0280007251.01.T03	AT5G27910	53.061	98	43	1	6	103	16	110	1.11e-31	112
MsG0280007251.01.T03	AT5G50490	45.192	104	54	1	6	109	16	116	2.39e-27	100
MsG0280007251.01.T03	AT5G50470	38.168	131	72	2	6	130	43	170	4.15e-25	95.9
MsG0280007251.01.T03	AT5G38140	39.806	103	60	1	4	106	44	144	1.25e-22	89.0

Find 45 sgRNAs with CRISPR-Local

Find 51 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CGTGCTTAATCTTCTGAATT+TGG	0.096494	2:+12558916	None:intergenic
ATTGGGACACCTTCTCTTCT+TGG	0.200965	2:+12559142	None:intergenic
AATGGAGCGTGACATATTTA+TGG	0.230451	2:-12559170	MsG0280007251.01.T01:CDS
GGCATGTGAAATGTTTATTA+TGG	0.268895	2:-12559326	MsG0280007251.01.T01:CDS
TAGTCCTCCAAGAATGCTTA+TGG	0.282983	2:-12559046	MsG0280007251.01.T01:CDS
GGTGTTCCCATAAGCATTCT+TGG	0.338684	2:+12559039	None:intergenic
AAGGAACATATATTCCCTAT+TGG	0.345891	2:+12559124	None:intergenic
ATCTTCTTAATCCTTGCTAA+TGG	0.378288	2:+12559409	None:intergenic
AGAAGAGAAGGTGTCCCAAT+AGG	0.387819	2:-12559139	MsG0280007251.01.T01:intron
GCCGGCATAGGCACATAATA+AGG	0.398907	2:+12559105	None:intergenic
ACTGTTGATTTCAAAAGTAA+TGG	0.437192	2:-12559436	MsG0280007251.01.T02:CDS
AGGAACATATATTCCCTATT+GGG	0.437588	2:+12559125	None:intergenic
ATGGAGCGTGACATATTTAT+GGG	0.438860	2:-12559169	MsG0280007251.01.T01:CDS
GAAGAGAAGGTGTCCCAATA+GGG	0.451739	2:-12559138	MsG0280007251.01.T01:intron
TCCTTATTATGTGCCTATGC+CGG	0.483112	2:-12559106	MsG0280007251.01.T01:intron
TCAATCAGCCTCATAACAAC+AGG	0.483454	2:-12559011	MsG0280007251.01.T01:CDS
AATTTGGAAAATCAACATAA+TGG	0.484356	2:+12558932	None:intergenic
CATGCCTTAGCAAACAGAAT+AGG	0.486382	2:+12559343	None:intergenic
CCTAGTTGATATTGTCCCTA+GGG	0.487741	2:-12559200	MsG0280007251.01.T01:CDS
GGAAACATTTGATTTGCAAG+AGG	0.498129	2:+12558976	None:intergenic
TGGAGCTAGCAACAAGGTCA+TGG	0.501489	2:-12559306	MsG0280007251.01.T01:CDS
AAGATCATGAAAACAGAAGA+AGG	0.505724	2:-12559391	MsG0280007251.01.T02:CDS
AGTCCTCCAAGAATGCTTAT+GGG	0.511667	2:-12559045	MsG0280007251.01.T01:CDS
CCCTAGGGACAATATCAACT+AGG	0.511793	2:+12559200	None:intergenic
GAAACATTTGATTTGCAAGA+GGG	0.521354	2:+12558977	None:intergenic
GGCACCTATTCTGTTTGCTA+AGG	0.530640	2:-12559347	MsG0280007251.01.T01:CDS
GAGGGCTGCCTGTTGTTATG+AGG	0.531966	2:+12559003	None:intergenic
AATGTTTCCAATCCAAAAGC+AGG	0.532891	2:-12558962	MsG0280007251.01.T01:CDS
TACTGAGGTGGCATATGAGC+CGG	0.534480	2:+12559087	None:intergenic
TTGATTTGCAAGAGGGTGTG+AGG	0.552359	2:+12558984	None:intergenic
ATGCCACCTCAGTATGATGC+AGG	0.555708	2:-12559078	MsG0280007251.01.T01:CDS
TCCTAGTTGATATTGTCCCT+AGG	0.558927	2:-12559201	MsG0280007251.01.T01:CDS
GGTGGCATATGAGCCGGCAT+AGG	0.576392	2:+12559093	None:intergenic
GGAGCTAGCAACAAGGTCAT+GGG	0.582315	2:-12559305	MsG0280007251.01.T01:CDS
ATTCTTGGAGGACTATATGA+TGG	0.593998	2:+12559054	None:intergenic
GTAATGGCTTGCCATTAGCA+AGG	0.597965	2:-12559420	MsG0280007251.01.T02:CDS
GTTCCCATAAGCATTCTTGG+AGG	0.601037	2:+12559042	None:intergenic
TGATTTGCAAGAGGGTGTGA+GGG	0.602521	2:+12558985	None:intergenic
ATGGGTATACCAAGAAGAGA+AGG	0.611937	2:-12559151	MsG0280007251.01.T01:CDS
AAGGTCATGGGCTAATACAG+AGG	0.637560	2:-12559293	MsG0280007251.01.T01:CDS
TTATGAGGCTGATTGAGAGA+AGG	0.649482	2:+12559018	None:intergenic
AGTGAGTATGATATCAGCTG+AGG	0.690629	2:-12559368	MsG0280007251.01.T01:CDS
TTATTATGGAGCTAGCAACA+AGG	0.697305	2:-12559312	MsG0280007251.01.T01:CDS
GGACCTGCATCATACTGAGG+TGG	0.712395	2:+12559075	None:intergenic
GATGGACCTGCATCATACTG+AGG	0.765521	2:+12559072	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AATTTGGAAAATCAACATAA+TGG	+	Chr2:12559503-12559522	None:intergenic	20.0%
!!!	ACTGTTGATTTCAAAAGTAA+TGG	-	Chr2:12558996-12559015	MsG0280007251.01.T01:CDS	25.0%
	AAGATCATGAAAACAGAAGA+AGG	-	Chr2:12559041-12559060	MsG0280007251.01.T01:CDS	30.0%
	AAGGAACATATATTCCCTAT+TGG	+	Chr2:12559311-12559330	None:intergenic	30.0%
	AGGAACATATATTCCCTATT+GGG	+	Chr2:12559310-12559329	None:intergenic	30.0%
	ATCTTCTTAATCCTTGCTAA+TGG	+	Chr2:12559026-12559045	None:intergenic	30.0%
	GGCATGTGAAATGTTTATTA+TGG	-	Chr2:12559106-12559125	MsG0280007251.01.T01:intron	30.0%
!!	GAAACATTTGATTTGCAAGA+GGG	+	Chr2:12559458-12559477	None:intergenic	30.0%
!!!	TTCATTTTGTTTTGACCAGA+AGG	+	Chr2:12558964-12558983	None:intergenic	30.0%
	AATGGAGCGTGACATATTTA+TGG	-	Chr2:12559262-12559281	MsG0280007251.01.T01:CDS	35.0%
	AATGTTTCCAATCCAAAAGC+AGG	-	Chr2:12559470-12559489	MsG0280007251.01.T02:CDS	35.0%
	AGAAAAAACTTGACACCTTC+TGG	-	Chr2:12558946-12558965	MsG0280007251.01.T01:CDS	35.0%
	ATGGAGCGTGACATATTTAT+GGG	-	Chr2:12559263-12559282	MsG0280007251.01.T01:CDS	35.0%
	ATTCTTGGAGGACTATATGA+TGG	+	Chr2:12559381-12559400	None:intergenic	35.0%
	TTATTATGGAGCTAGCAACA+AGG	-	Chr2:12559120-12559139	MsG0280007251.01.T01:intron	35.0%
!!	AATGGTCATTTTCCTGCTTT+TGG	+	Chr2:12559485-12559504	None:intergenic	35.0%
!!	GGAAACATTTGATTTGCAAG+AGG	+	Chr2:12559459-12559478	None:intergenic	35.0%
!!	TCATTTTCCTGCTTTTGGAT+TGG	+	Chr2:12559480-12559499	None:intergenic	35.0%
	AGTCCTCCAAGAATGCTTAT+GGG	-	Chr2:12559387-12559406	MsG0280007251.01.T01:CDS	40.0%
	AGTGAGTATGATATCAGCTG+AGG	-	Chr2:12559064-12559083	MsG0280007251.01.T01:CDS	40.0%
	ATGGGTATACCAAGAAGAGA+AGG	-	Chr2:12559281-12559300	MsG0280007251.01.T01:CDS	40.0%
	CATGCCTTAGCAAACAGAAT+AGG	+	Chr2:12559092-12559111	None:intergenic	40.0%
	TAGTCCTCCAAGAATGCTTA+TGG	-	Chr2:12559386-12559405	MsG0280007251.01.T01:CDS	40.0%
	TCAATCAGCCTCATAACAAC+AGG	-	Chr2:12559421-12559440	MsG0280007251.01.T02:CDS	40.0%
	TCCTTATTATGTGCCTATGC+CGG	-	Chr2:12559326-12559345	MsG0280007251.01.T01:CDS	40.0%
	TGTCCCTAGGGAAAAAACAA+TGG	-	Chr2:12559244-12559263	MsG0280007251.01.T01:CDS	40.0%
	TTATGAGGCTGATTGAGAGA+AGG	+	Chr2:12559417-12559436	None:intergenic	40.0%
!	CCTAGTTGATATTGTCCCTA+GGG	-	Chr2:12559232-12559251	MsG0280007251.01.T01:CDS	40.0%
!	TCCTAGTTGATATTGTCCCT+AGG	-	Chr2:12559231-12559250	MsG0280007251.01.T01:CDS	40.0%
!!!	GCTCCATTGTTTTTTCCCTA+GGG	+	Chr2:12559250-12559269	None:intergenic	40.0%
	ATTGGGACACCTTCTCTTCT+TGG	+	Chr2:12559293-12559312	None:intergenic	45.0%
	CCCTAGGGACAATATCAACT+AGG	+	Chr2:12559235-12559254	None:intergenic	45.0%
	GGTGTTCCCATAAGCATTCT+TGG	+	Chr2:12559396-12559415	None:intergenic	45.0%
	GTTCCCATAAGCATTCTTGG+AGG	+	Chr2:12559393-12559412	None:intergenic	45.0%
!	AAGGTCATGGGCTAATACAG+AGG	-	Chr2:12559139-12559158	MsG0280007251.01.T01:intron	45.0%
!	GGCACCTATTCTGTTTGCTA+AGG	-	Chr2:12559085-12559104	MsG0280007251.01.T01:CDS	45.0%
!	GTAATGGCTTGCCATTAGCA+AGG	-	Chr2:12559012-12559031	MsG0280007251.01.T01:CDS	45.0%
!	TGATTTGCAAGAGGGTGTGA+GGG	+	Chr2:12559450-12559469	None:intergenic	45.0%
!!	AGAAGAGAAGGTGTCCCAAT+AGG	-	Chr2:12559293-12559312	MsG0280007251.01.T01:CDS	45.0%
!!	GAAGAGAAGGTGTCCCAATA+GGG	-	Chr2:12559294-12559313	MsG0280007251.01.T01:CDS	45.0%
!!	TTGATTTGCAAGAGGGTGTG+AGG	+	Chr2:12559451-12559470	None:intergenic	45.0%
!!!	CGCTCCATTGTTTTTTCCCT+AGG	+	Chr2:12559251-12559270	None:intergenic	45.0%
	ATGCCACCTCAGTATGATGC+AGG	-	Chr2:12559354-12559373	MsG0280007251.01.T01:CDS	50.0%
	GATGGACCTGCATCATACTG+AGG	+	Chr2:12559363-12559382	None:intergenic	50.0%
	GCCGGCATAGGCACATAATA+AGG	+	Chr2:12559330-12559349	None:intergenic	50.0%
	GGAGCTAGCAACAAGGTCAT+GGG	-	Chr2:12559127-12559146	MsG0280007251.01.T01:intron	50.0%
	TACTGAGGTGGCATATGAGC+CGG	+	Chr2:12559348-12559367	None:intergenic	50.0%
	TGGAGCTAGCAACAAGGTCA+TGG	-	Chr2:12559126-12559145	MsG0280007251.01.T01:intron	50.0%
	GAGGGCTGCCTGTTGTTATG+AGG	+	Chr2:12559432-12559451	None:intergenic	55.0%
	GGACCTGCATCATACTGAGG+TGG	+	Chr2:12559360-12559379	None:intergenic	55.0%
	GGTGGCATATGAGCCGGCAT+AGG	+	Chr2:12559342-12559361	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
Chr2	gene	12558921	12559533	12558921	ID=MsG0280007251.01;Name=MsG0280007251.01
Chr2	mRNA	12558921	12559407	12558921	ID=MsG0280007251.01.T01;Parent=MsG0280007251.01;Name=MsG0280007251.01.T01;_AED=0.22;_eAED=0.22;_QI=0\|0\|0\|1\|0\|0\|2\|0\|149
Chr2	exon	12558921	12559106	12558921	ID=MsG0280007251.01.T01:exon:7627;Parent=MsG0280007251.01.T01
Chr2	exon	12559144	12559407	12559144	ID=MsG0280007251.01.T01:exon:7626;Parent=MsG0280007251.01.T01
Chr2	CDS	12559144	12559407	12559144	ID=MsG0280007251.01.T01:cds;Parent=MsG0280007251.01.T01
Chr2	CDS	12558921	12559106	12558921	ID=MsG0280007251.01.T01:cds;Parent=MsG0280007251.01.T01
Chr2	mRNA	12559084	12559533	12559084	ID=MsG0280007251.01.T02;Parent=MsG0280007251.01;Name=MsG0280007251.01.T02;_AED=0.21;_eAED=0.21;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|149
Chr2	exon	12559084	12559533	12559084	ID=MsG0280007251.01.T02:exon:7628;Parent=MsG0280007251.01.T02
Chr2	CDS	12559084	12559533	12559084	ID=MsG0280007251.01.T02:cds;Parent=MsG0280007251.01.T02
Chr2	mRNA	12559084	12559521	12559084	ID=MsG0280007251.01.T03;Parent=MsG0280007251.01;Name=MsG0280007251.01.T03;_AED=0.22;_eAED=0.22;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|145
Chr2	exon	12559084	12559521	12559084	ID=MsG0280007251.01.T03:exon:7629;Parent=MsG0280007251.01.T03
Chr2	CDS	12559084	12559521	12559084	ID=MsG0280007251.01.T03:cds;Parent=MsG0280007251.01.T03
Chr2	mRNA	12559084	12559407	12559084	ID=MsG0280007251.01.T04;Parent=MsG0280007251.01;Name=MsG0280007251.01.T04;_AED=0.29;_eAED=0.29;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|107
Chr2	exon	12559084	12559407	12559084	ID=MsG0280007251.01.T04:exon:7630;Parent=MsG0280007251.01.T04
Chr2	CDS	12559084	12559407	12559084	ID=MsG0280007251.01.T04:cds;Parent=MsG0280007251.01.T04
Chr2	mRNA	12559084	12559329	12559084	ID=MsG0280007251.01.T05;Parent=MsG0280007251.01;Name=MsG0280007251.01.T05;_AED=0.34;_eAED=0.34;_QI=0\|-1\|0\|1\|-1\|0\|1\|0\|81
Chr2	exon	12559084	12559329	12559084	ID=MsG0280007251.01.T05:exon:7631;Parent=MsG0280007251.01.T05
Chr2	CDS	12559084	12559329	12559084	ID=MsG0280007251.01.T05:cds;Parent=MsG0280007251.01.T05

Gene Sequence

>MsG0280007251.01.T02

CGACAACAAAAACAACAAGAATTGCAGAAAAAACTTGACACCTTCTGGTCAAAACAAAATGAAGAAGTTCAGAAGACTGTTGATTTCAAAAGTAATGGCTTGCCATTAGCAAGGATTAAGAAGATCATGAAAACAGAAGAAGGAGTGAGTATGATATCAGCTGAGGCACCTATTCTGTTTGCTAAGGCATGTGAAATGTTTATTATGGAGCTAGCAACAAGGTCATGGGCTAATACAGAGGTGAACAAAAGAAAGACACTTCAAAAGAGTGACATTGCATCTGCTGTCTCAAGTAATGAAGTGTTTGATTTCCTAGTTGATATTGTCCCTAGGGAAAAAACAATGGAGCGTGACATATTTATGGGTATACCAAGAAGAGAAGGTGTCCCAATAGGGAATATATGTTCCTTATTATGTGCCTATGCCGGCTCATATGCCACCTCAGTATGA

>MsG0280007251.01.T01

ATGAAAACAGAAGAAGGAGTGAGTATGATATCAGCTGAGGCACCTATTCTGTTTGCTAAGGCATGTGAAATGTTTATTATGGAGCTAGCAACAAGGTCATGGGCTAATACAGAGGTGAACAAAAGAAAGACACTTCAAAAGAGTGACATTGCATCTGCTGTCTCAAGTAATGAAGTGTTTGATTTCCTAGTTGATATTGTCCCTAGGGAAAAAACAATGGAGCGTGACATATTTATGGGTATACCAAGAAGAGAAGGTGTCCCAGCTCATATGCCACCTCAGTATGATGCAGGTCCATCATATAGTCCTCCAAGAATGCTTATGGGAACACCTTCTCTCAATCAGCCTCATAACAACAGGCAGCCCTCACACCCTCTTGCAAATCAAATGTTTCCAATCCAAAAGCAGGAAAATGACCATTATGTTGATTTTCCAAATTCAGAAGATTAA

>MsG0280007251.01.T05

ATGGAGCTAGCAACAAGGTCATGGGCTAATACAGAGGTGAACAAAAGAAAGACACTTCAAAAGAGTGACATTGCATCTGCTGTCTCAAGTAATGAAGTGTTTGATTTCCTAGTTGATATTGTCCCTAGGGAAAAAACAATGGAGCGTGACATATTTATGGGTATACCAAGAAGAGAAGGTGTCCCAATAGGGAATATATGTTCCTTATTATGTGCCTATGCCGGCTCATATGCCACCTCAGTATGA

>MsG0280007251.01.T04

ATGAAAACAGAAGAAGGAGTGAGTATGATATCAGCTGAGGCACCTATTCTGTTTGCTAAGGCATGTGAAATGTTTATTATGGAGCTAGCAACAAGGTCATGGGCTAATACAGAGGTGAACAAAAGAAAGACACTTCAAAAGAGTGACATTGCATCTGCTGTCTCAAGTAATGAAGTGTTTGATTTCCTAGTTGATATTGTCCCTAGGGAAAAAACAATGGAGCGTGACATATTTATGGGTATACCAAGAAGAGAAGGTGTCCCAATAGGGAATATATGTTCCTTATTATGTGCCTATGCCGGCTCATATGCCACCTCAGTATGA

>MsG0280007251.01.T03

CAACAAGAATTGCAGAAAAAACTTGACACCTTCTGGTCAAAACAAAATGAAGAAGTTCAGAAGACTGTTGATTTCAAAAGTAATGGCTTGCCATTAGCAAGGATTAAGAAGATCATGAAAACAGAAGAAGGAGTGAGTATGATATCAGCTGAGGCACCTATTCTGTTTGCTAAGGCATGTGAAATGTTTATTATGGAGCTAGCAACAAGGTCATGGGCTAATACAGAGGTGAACAAAAGAAAGACACTTCAAAAGAGTGACATTGCATCTGCTGTCTCAAGTAATGAAGTGTTTGATTTCCTAGTTGATATTGTCCCTAGGGAAAAAACAATGGAGCGTGACATATTTATGGGTATACCAAGAAGAGAAGGTGTCCCAATAGGGAATATATGTTCCTTATTATGTGCCTATGCCGGCTCATATGCCACCTCAGTATGA

Protein sequence

>MsG0280007251.01.T02

RQQKQQELQKKLDTFWSKQNEEVQKTVDFKSNGLPLARIKKIMKTEEGVSMISAEAPILFAKACEMFIMELATRSWANTEVNKRKTLQKSDIASAVSSNEVFDFLVDIVPREKTMERDIFMGIPRREGVPIGNICSLLCAYAGSYATSV*

>MsG0280007251.01.T01

MKTEEGVSMISAEAPILFAKACEMFIMELATRSWANTEVNKRKTLQKSDIASAVSSNEVFDFLVDIVPREKTMERDIFMGIPRREGVPAHMPPQYDAGPSYSPPRMLMGTPSLNQPHNNRQPSHPLANQMFPIQKQENDHYVDFPNSED*

>MsG0280007251.01.T05

MELATRSWANTEVNKRKTLQKSDIASAVSSNEVFDFLVDIVPREKTMERDIFMGIPRREGVPIGNICSLLCAYAGSYATSV*

>MsG0280007251.01.T04

MKTEEGVSMISAEAPILFAKACEMFIMELATRSWANTEVNKRKTLQKSDIASAVSSNEVFDFLVDIVPREKTMERDIFMGIPRREGVPIGNICSLLCAYAGSYATSV*

>MsG0280007251.01.T03

QQELQKKLDTFWSKQNEEVQKTVDFKSNGLPLARIKKIMKTEEGVSMISAEAPILFAKACEMFIMELATRSWANTEVNKRKTLQKSDIASAVSSNEVFDFLVDIVPREKTMERDIFMGIPRREGVPIGNICSLLCAYAGSYATSV*