AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280007416.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007416.01.T01 MTR_2g024430 88.932 515 54 2 1 512 1 515 0.0 947
MsG0280007416.01.T01 MTR_5g040880 59.533 514 190 8 13 511 4 514 0.0 565
MsG0280007416.01.T01 MTR_5g082140 54.167 504 179 7 9 506 1 458 5.46e-178 508
MsG0280007416.01.T01 MTR_5g061220 50.554 542 210 12 7 511 6 526 1.87e-166 481
MsG0280007416.01.T01 MTR_5g040740 53.150 508 130 9 9 511 1 405 1.05e-165 475
MsG0280007416.01.T01 MTR_1g058210 45.686 510 195 14 9 504 1 442 1.15e-132 393
MsG0280007416.01.T01 MTR_2g006270 45.759 507 204 11 13 510 6 450 2.47e-129 384
MsG0280007416.01.T01 MTR_3g073420 43.113 559 251 12 10 511 9 557 3.57e-126 381
MsG0280007416.01.T01 MTR_2g006380 41.980 505 217 15 14 510 14 450 5.89e-112 340
MsG0280007416.01.T01 MTR_5g061890 49.598 373 153 14 9 362 1 357 1.78e-100 308
MsG0280007416.01.T01 MTR_5g060630 40.901 533 222 18 9 464 1 517 3.96e-100 311
MsG0280007416.01.T01 MTR_5g460740 40.901 533 222 18 9 464 1 517 3.96e-100 311
MsG0280007416.01.T01 MTR_5g060780 50.712 351 139 13 9 340 1 336 1.22e-99 306
MsG0280007416.01.T01 MTR_5g460920 50.712 351 139 13 9 340 1 336 4.70e-99 305
MsG0280007416.01.T01 MTR_2g094570 40.394 406 167 11 17 361 8 399 2.12e-87 282
MsG0280007416.01.T01 MTR_2g094570 40.394 406 167 11 17 361 8 399 3.10e-87 283
MsG0280007416.01.T01 MTR_2g094570 39.952 418 175 12 5 361 53 455 5.60e-87 283
MsG0280007416.01.T01 MTR_1g064430 40.394 406 173 10 17 360 24 422 2.90e-85 277
MsG0280007416.01.T01 MTR_1g064430 40.394 406 173 10 17 360 37 435 3.63e-85 277
MsG0280007416.01.T01 MTR_4g058930 39.563 412 178 10 9 358 1 403 1.14e-84 275
MsG0280007416.01.T01 MTR_4g058930 39.563 412 178 10 9 358 1 403 2.73e-84 275
MsG0280007416.01.T01 MTR_1g094960 35.742 512 243 15 17 464 16 505 1.36e-83 271
MsG0280007416.01.T01 MTR_7g101280 37.500 416 176 12 17 361 28 430 7.70e-76 251
MsG0280007416.01.T01 MTR_0041s0110 37.500 416 176 12 17 361 28 430 7.70e-76 251
MsG0280007416.01.T01 MTR_7g101275 40.312 320 152 10 30 325 2 306 4.18e-64 214
MsG0280007416.01.T01 MTR_5g062970 53.571 196 85 2 20 213 38 229 5.33e-64 208
MsG0280007416.01.T01 MTR_2g014770 35.958 381 205 12 11 365 45 412 8.08e-59 205
MsG0280007416.01.T01 MTR_0041s0120 38.889 324 163 9 30 325 2 318 1.16e-58 200
MsG0280007416.01.T01 MTR_2g014770 35.958 381 205 12 11 365 45 412 2.80e-58 205
MsG0280007416.01.T01 MTR_4g088210 31.729 457 256 13 20 446 38 468 4.51e-55 196
MsG0280007416.01.T01 MTR_4g088210 31.729 457 256 13 20 446 38 468 7.42e-55 196
MsG0280007416.01.T01 MTR_2g093740 31.544 447 241 14 20 416 56 487 8.66e-53 190
MsG0280007416.01.T01 MTR_2g093740 31.544 447 241 14 20 416 56 487 2.42e-52 189
MsG0280007416.01.T01 MTR_2g093740 31.544 447 241 14 20 416 56 487 3.53e-52 190
MsG0280007416.01.T01 MTR_2g005240 35.694 353 195 12 20 350 23 365 6.46e-51 184
MsG0280007416.01.T01 MTR_8g100050 34.444 360 210 10 20 359 59 412 1.75e-50 184
MsG0280007416.01.T01 MTR_8g100050 34.444 360 210 10 20 359 59 412 3.38e-50 184
MsG0280007416.01.T01 MTR_4g021580 33.148 359 212 10 20 358 19 369 5.36e-50 181
MsG0280007416.01.T01 MTR_4g021580 33.148 359 212 10 20 358 19 369 8.56e-50 181
MsG0280007416.01.T01 MTR_2g018690 33.060 366 201 12 11 345 11 363 1.20e-49 183
MsG0280007416.01.T01 MTR_2g093740 30.652 460 241 15 20 416 56 500 3.28e-49 180
MsG0280007416.01.T01 MTR_8g027440 35.000 360 202 12 20 358 29 377 3.39e-49 180
MsG0280007416.01.T01 MTR_5g060770 38.109 349 153 13 71 405 8 307 3.72e-49 173
MsG0280007416.01.T01 MTR_2g093740 30.652 460 241 15 20 416 56 500 6.87e-49 180
MsG0280007416.01.T01 MTR_2g093740 30.652 460 241 15 20 416 56 500 9.17e-49 180
MsG0280007416.01.T01 MTR_7g062540 33.242 364 204 12 20 358 14 363 2.89e-48 177
MsG0280007416.01.T01 MTR_2g043250 31.549 355 196 11 17 341 20 357 9.87e-48 178
MsG0280007416.01.T01 MTR_4g060460 32.308 390 236 8 20 383 54 441 1.54e-47 176
MsG0280007416.01.T01 MTR_5g076270 32.670 352 200 10 20 345 24 364 2.42e-47 176
MsG0280007416.01.T01 MTR_4g060460 33.516 364 213 8 20 358 54 413 2.56e-47 176
MsG0280007416.01.T01 MTR_4g124900 31.728 353 194 11 17 339 20 355 7.71e-47 176
MsG0280007416.01.T01 MTR_4g124900 31.728 353 194 11 17 339 20 355 8.57e-47 175
MsG0280007416.01.T01 MTR_3g064050 32.386 352 201 10 20 345 26 366 2.68e-46 173
MsG0280007416.01.T01 MTR_8g079492 33.152 368 197 15 11 345 11 362 4.24e-46 173
MsG0280007416.01.T01 MTR_8g079492 33.152 368 197 15 11 345 11 362 4.50e-46 173
MsG0280007416.01.T01 MTR_1g024025 35.244 349 182 15 20 339 43 376 1.20e-45 172
MsG0280007416.01.T01 MTR_8g101360 31.549 355 200 12 17 342 28 368 7.43e-44 167
MsG0280007416.01.T01 MTR_2g093740 32.515 326 179 9 124 416 40 357 2.69e-40 154
MsG0280007416.01.T01 MTR_2g093740 32.515 326 179 9 124 416 40 357 3.51e-40 154
MsG0280007416.01.T01 MTR_8g079492 34.028 288 157 11 81 345 3 280 6.27e-38 149
MsG0280007416.01.T01 MTR_2g093740 31.268 339 179 10 124 416 40 370 5.56e-37 145
MsG0280007416.01.T01 MTR_2g093740 31.268 339 179 10 124 416 40 370 6.38e-37 145
MsG0280007416.01.T01 MTR_5g062960 41.905 210 92 8 238 440 1 187 6.47e-37 135
MsG0280007416.01.T01 MTR_8g446900 28.470 281 182 6 72 339 14 288 1.15e-29 120
MsG0280007416.01.T01 MTR_5g460910 32.092 349 152 14 71 405 25 302 3.01e-29 118
MsG0280007416.01.T01 MTR_5g046120 42.623 122 64 2 52 170 5 123 2.40e-18 81.6
MsG0280007416.01.T01 MTR_8g023990 31.538 130 81 4 99 227 148 270 6.98e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007416.01.T01 AT1G77850 37.684 544 263 16 9 489 1 531 1.70e-101 317
MsG0280007416.01.T01 AT1G77850 37.684 544 263 16 9 489 1 531 2.80e-101 317
MsG0280007416.01.T01 AT4G30080 40.376 426 173 14 17 379 16 423 1.27e-83 273
MsG0280007416.01.T01 AT2G28350 38.942 416 177 12 13 363 3 406 2.95e-80 264
MsG0280007416.01.T01 AT2G28350 38.942 416 177 12 13 363 3 406 3.26e-80 263
MsG0280007416.01.T01 AT2G46530 36.240 367 191 16 20 358 21 372 9.83e-55 194
MsG0280007416.01.T01 AT2G46530 36.240 367 191 16 20 358 42 393 1.70e-54 194
MsG0280007416.01.T01 AT3G61830 36.176 340 187 13 20 339 25 354 1.05e-53 191
MsG0280007416.01.T01 AT5G37020 34.091 352 195 10 20 345 22 362 1.13e-51 188
MsG0280007416.01.T01 AT5G37020 34.091 352 195 10 20 345 22 362 1.37e-51 188
MsG0280007416.01.T01 AT1G35520 35.509 383 214 14 3 365 10 379 1.40e-51 185
MsG0280007416.01.T01 AT4G23980 33.923 339 197 9 20 339 12 342 1.50e-51 186
MsG0280007416.01.T01 AT4G23980 33.923 339 197 9 20 339 12 342 1.64e-51 186
MsG0280007416.01.T01 AT2G33860 34.783 345 190 10 20 339 54 388 1.79e-50 182
MsG0280007416.01.T01 AT1G34390 35.372 376 208 15 3 358 10 370 1.40e-49 180
MsG0280007416.01.T01 AT1G34410 33.943 383 220 13 3 365 10 379 1.81e-49 179
MsG0280007416.01.T01 AT1G34310 35.000 380 206 14 3 358 10 372 2.69e-49 179
MsG0280007416.01.T01 AT5G62000 33.705 359 212 10 20 358 61 413 4.24e-49 181
MsG0280007416.01.T01 AT5G62000 33.705 359 212 10 20 358 61 413 4.24e-49 181
MsG0280007416.01.T01 AT5G62000 33.705 359 212 10 20 358 61 413 4.24e-49 181
MsG0280007416.01.T01 AT5G62000 33.705 359 212 10 20 358 61 413 4.24e-49 181
MsG0280007416.01.T01 AT5G62000 33.705 359 212 10 20 358 61 413 4.53e-49 181
MsG0280007416.01.T01 AT1G59750 34.211 342 193 11 20 339 22 353 7.36e-49 179
MsG0280007416.01.T01 AT1G59750 34.211 342 193 11 20 339 22 353 8.33e-49 179
MsG0280007416.01.T01 AT1G59750 34.211 342 193 11 20 339 22 353 8.45e-49 179
MsG0280007416.01.T01 AT1G59750 34.211 342 193 11 20 339 22 353 8.45e-49 179
MsG0280007416.01.T01 AT5G60450 34.865 370 207 13 15 356 36 399 1.09e-48 179
MsG0280007416.01.T01 AT5G60450 35.068 365 203 13 20 356 65 423 2.46e-48 179
MsG0280007416.01.T01 AT1G30330 32.877 365 203 11 12 345 10 363 2.85e-48 179
MsG0280007416.01.T01 AT1G30330 32.698 367 203 11 12 345 10 365 7.40e-48 178
MsG0280007416.01.T01 AT1G30330 32.698 367 203 11 12 345 10 365 7.40e-48 178
MsG0280007416.01.T01 AT1G35540 33.898 354 206 12 3 339 10 352 7.76e-48 175
MsG0280007416.01.T01 AT1G35240 34.225 374 217 13 3 358 10 372 8.40e-47 172
MsG0280007416.01.T01 AT1G19850 34.540 359 178 12 17 339 51 388 2.70e-46 173
MsG0280007416.01.T01 AT1G19850 34.540 359 178 12 17 339 40 377 2.73e-46 173
MsG0280007416.01.T01 AT5G20730 30.878 353 198 10 17 339 21 357 8.65e-44 166
MsG0280007416.01.T01 AT1G19220 31.268 355 197 12 17 341 20 357 9.95e-44 166
MsG0280007416.01.T01 AT5G20730 30.704 355 200 10 17 341 21 359 1.09e-43 166
MsG0280007416.01.T01 AT5G20730 30.704 355 199 11 17 341 21 358 1.24e-42 163
MsG0280007416.01.T01 AT3G61830 36.842 285 154 11 72 339 28 303 4.85e-42 158
MsG0280007416.01.T01 AT1G34170 31.868 364 200 13 20 356 25 367 5.18e-41 154
MsG0280007416.01.T01 AT2G46530 37.638 271 142 11 106 358 24 285 6.16e-40 151
MsG0280007416.01.T01 AT2G33860 37.500 232 125 7 124 339 4 231 2.56e-39 149
MsG0280007416.01.T01 AT5G37020 35.685 241 130 8 124 345 33 267 1.85e-37 147
MsG0280007416.01.T01 AT1G34170 32.958 355 182 15 20 356 25 341 7.63e-36 139
MsG0280007416.01.T01 AT1G34170 32.958 355 182 15 20 356 25 341 1.89e-35 139
MsG0280007416.01.T01 AT1G43950 36.522 230 121 7 2 222 9 222 2.87e-31 120
MsG0280007416.01.T01 AT4G01500 30.597 134 90 1 124 257 38 168 1.21e-11 66.6

Find 135 sgRNAs with CRISPR-Local

Find 199 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTGGTTCATTTATGCTATT+TGG 0.105998 2:+15107342 MsG0280007416.01.T01:CDS
AACATTAGCACATCTATATT+TGG 0.209645 2:+15107231 MsG0280007416.01.T01:CDS
AATATATATTATAGGTTAAC+TGG 0.211032 2:+15106851 MsG0280007416.01.T01:intron
GGAGACATGGCGGAAATATT+TGG 0.255210 2:-15104935 None:intergenic
CTTCCAACTCTTTCAATGAT+AGG 0.271660 2:+15107148 MsG0280007416.01.T01:CDS
TTCTTTGGTGCTGCACTTGT+GGG 0.284414 2:-15107313 None:intergenic
TGAACCAGGATTAACTTCTT+TGG 0.304162 2:-15107328 None:intergenic
AGGGATAGGGTTTCAGTGTT+GGG 0.310433 2:-15105088 None:intergenic
ACCTCCCAAGGGCTTTGCTT+TGG 0.312781 2:-15106898 None:intergenic
GACACCTGATCACCACTAAT+TGG 0.319561 2:+15105476 MsG0280007416.01.T01:CDS
GCGCAGCACCGCCAAATCTT+TGG 0.327738 2:-15104980 None:intergenic
CCGACGTTCATGGCAAAGTC+TGG 0.342190 2:+15105419 MsG0280007416.01.T01:CDS
TACAATTGCCCTCAGCAAAA+AGG 0.346652 2:+15106953 MsG0280007416.01.T01:CDS
TTTGGATTATGTGAGACTTC+AGG 0.376866 2:-15106880 None:intergenic
ATCCAACAATGTTTGATTCA+AGG 0.377439 2:-15107064 None:intergenic
AGGATGCAATGAAGATTAAC+TGG 0.377747 2:+15105740 MsG0280007416.01.T01:CDS
AATCTTTGGTTCTACACGGC+TGG 0.380640 2:-15104966 None:intergenic
ATCCGTCGGCATACTAAGTT+TGG 0.389012 2:+15105586 MsG0280007416.01.T01:CDS
ATCCTTGAATCAAACATTGT+TGG 0.389726 2:+15107062 MsG0280007416.01.T01:CDS
ACCCTATCTGATGCTAATAA+TGG 0.393308 2:+15105304 MsG0280007416.01.T01:CDS
CTTCTTTGGTGCTGCACTTG+TGG 0.393725 2:-15107314 None:intergenic
CCCTTTGAGACAAAGTTTGA+CGG 0.397840 2:+15107288 MsG0280007416.01.T01:CDS
CACCATTATTAGCATCAGAT+AGG 0.401174 2:-15105306 None:intergenic
AATATAGATGTGCTAATGTT+TGG 0.410256 2:-15107228 None:intergenic
CTGTCTGTTACCGACGTTCA+TGG 0.414559 2:+15105409 MsG0280007416.01.T01:CDS
CCGTCAAACTTTGTCTCAAA+GGG 0.416058 2:-15107288 None:intergenic
GGTGATGAAATTGTTTCCTC+TGG 0.421466 2:+15105271 MsG0280007416.01.T01:CDS
GGGATAGGGTTTCAGTGTTG+GGG 0.425954 2:-15105087 None:intergenic
GCCGTGTAGAACCAAAGATT+TGG 0.431938 2:+15104969 MsG0280007416.01.T01:CDS
TACTCCAATTAGTGGTGATC+AGG 0.433415 2:-15105480 None:intergenic
AGCATGCGCCATGGACGATT+AGG 0.434996 2:-15105856 None:intergenic
TCATCTGGAGATATGTTTGT+TGG 0.440275 2:+15105562 MsG0280007416.01.T01:CDS
GAAACCCTATCCCTTCTTGA+TGG 0.440854 2:+15105097 MsG0280007416.01.T01:CDS
AACCATCAGTGATGGGAGTT+AGG 0.442469 2:-15105204 None:intergenic
CAAGGGAGAAGATGGTTGTA+TGG 0.451305 2:+15107410 MsG0280007416.01.T01:CDS
ATCTTTGGTTCTACACGGCT+GGG 0.452340 2:-15104965 None:intergenic
CACGAACTTACTCCAATTAG+TGG 0.453246 2:-15105488 None:intergenic
GAGATGGCTGTTTAGTTTCG+AGG 0.456957 2:-15105381 None:intergenic
AAGGGATAGGGTTTCAGTGT+TGG 0.458344 2:-15105089 None:intergenic
TCATGCAAATTACTTCCAAC+AGG 0.463742 2:-15107378 None:intergenic
TTCAAAATGCTATGGTTAAG+AGG 0.466292 2:-15107264 None:intergenic
GATAACTAAAGAATCGGTTA+TGG 0.468357 2:+15105618 MsG0280007416.01.T01:CDS
GGTTCTACACGGCTGGGTTG+TGG 0.468361 2:-15104959 None:intergenic
TTTCAATCCTTGCATTGTAT+CGG 0.468436 2:+15105129 MsG0280007416.01.T01:CDS
TTCCAACTCTTTCAATGATA+GGG 0.473757 2:+15107149 MsG0280007416.01.T01:CDS
ACAAAGACTTCATCAGTATG+AGG 0.479542 2:-15105172 None:intergenic
AAGATTTGGCGGTGCTGCGC+CGG 0.479939 2:+15104983 MsG0280007416.01.T01:CDS
GATAGGGTTTCAGTGTTGGG+GGG 0.483168 2:-15105085 None:intergenic
GGTTATGGCGGCAGCGGAGT+TGG 0.484984 2:+15105633 MsG0280007416.01.T01:CDS
AGTATTATCCTACGATTGAC+GGG 0.494475 2:+15105683 MsG0280007416.01.T01:CDS
ACCGTCAAACTTTGTCTCAA+AGG 0.497762 2:-15107289 None:intergenic
CATTGCATCCTCAACAACCT+TGG 0.498204 2:-15105728 None:intergenic
GGATAGGGTTTCAGTGTTGG+GGG 0.498312 2:-15105086 None:intergenic
AGAATCGGTTATGGCGGCAG+CGG 0.500580 2:+15105627 MsG0280007416.01.T01:CDS
GGCCCTATCATTGAAAGAGT+TGG 0.504567 2:-15107151 None:intergenic
GAGTATTATCCTACGATTGA+CGG 0.506288 2:+15105682 MsG0280007416.01.T01:CDS
CTGGAAATCTATCATTGGAA+TGG 0.511209 2:-15107025 None:intergenic
TCTGCTACCAAGGGAGAAGA+TGG 0.513250 2:+15107402 MsG0280007416.01.T01:CDS
GAATGCTGGAAATCTATCAT+TGG 0.515653 2:-15107030 None:intergenic
GAAATATTTGGTTCTACCAT+CGG 0.518665 2:-15104923 None:intergenic
TGCTAAGATAACTAAAGAAT+CGG 0.520496 2:+15105612 MsG0280007416.01.T01:CDS
CGTGACCATCAAGAAGGGAT+AGG 0.523750 2:-15105102 None:intergenic
TCTCTCTATATTATCTAATG+AGG 0.525248 2:-15106998 None:intergenic
TTTGCATGATTCTGCTACCA+AGG 0.526896 2:+15107392 MsG0280007416.01.T01:CDS
GCTGGGTTGTGGTGGAGACA+TGG 0.530128 2:-15104948 None:intergenic
ATATTATAGGTTAACTGGGA+TGG 0.530339 2:+15106856 MsG0280007416.01.T01:intron
AGTGGTGATCAGGTGTCTCA+AGG 0.534349 2:-15105470 None:intergenic
TAATCCAAAGCAAAGCCCTT+GGG 0.536094 2:+15106894 MsG0280007416.01.T01:CDS
GTATGGGCTGCAATAATTGA+AGG 0.536513 2:+15107427 MsG0280007416.01.T01:CDS
GAAATTAGTTCAACCTCCCA+AGG 0.540471 2:-15106910 None:intergenic
ATGAAGATTAACTGGAATTG+TGG 0.543117 2:+15105748 MsG0280007416.01.T01:CDS
CACTAATTGGAGTAAGTTCG+TGG 0.543836 2:+15105489 MsG0280007416.01.T01:CDS
GATACAATGCAAGGATTGAA+AGG 0.544112 2:-15105127 None:intergenic
CAAAGGGGTTCAAAATGCTA+TGG 0.546020 2:-15107272 None:intergenic
CTCCTAACTCCCATCACTGA+TGG 0.547018 2:+15105202 MsG0280007416.01.T01:CDS
ATAATCCAAAGCAAAGCCCT+TGG 0.548641 2:+15106893 MsG0280007416.01.T01:CDS
ACCATTATTAGCATCAGATA+GGG 0.549720 2:-15105305 None:intergenic
CATACAACCATCTTCTCCCT+TGG 0.552659 2:-15107409 None:intergenic
TCGTCCATGGCGCATGCTTG+AGG 0.553392 2:+15105861 MsG0280007416.01.T01:CDS
ATGATGATTCTTCAAAGAGA+TGG 0.554351 2:+15105797 MsG0280007416.01.T01:CDS
TCTCTGCTCCTAATCGTCCA+TGG 0.557073 2:+15105848 MsG0280007416.01.T01:CDS
TTGCATGATTCTGCTACCAA+GGG 0.558661 2:+15107393 MsG0280007416.01.T01:CDS
TCTTTGGTGCTGCACTTGTG+GGG 0.558880 2:-15107312 None:intergenic
GTGTAGAACCAAAGATTTGG+CGG 0.559765 2:+15104972 MsG0280007416.01.T01:CDS
GGCAATTGTAGATTCAGTGC+AGG 0.560065 2:-15106940 None:intergenic
TCCTACTGAGGTTCGTGAAG+AGG 0.565181 2:+15105240 MsG0280007416.01.T01:CDS
AAGGGAGAAGATGGTTGTAT+GGG 0.567406 2:+15107411 MsG0280007416.01.T01:CDS
GGTGGATGCCAAGGTTGTTG+AGG 0.569678 2:+15105720 MsG0280007416.01.T01:CDS
CGACGTTCATGGCAAAGTCT+GGG 0.573902 2:+15105420 MsG0280007416.01.T01:CDS
TGTTCACGAACCTCCTACTG+AGG 0.580009 2:+15105228 MsG0280007416.01.T01:CDS
GTGAACACAACCATCAGTGA+TGG 0.580232 2:-15105212 None:intergenic
CCAAATAGCATAAATGAACC+AGG 0.581265 2:-15107342 None:intergenic
AGCACCAAAGAAGTTAATCC+TGG 0.583231 2:+15107324 MsG0280007416.01.T01:CDS
TCTTCACGAACCTCAGTAGG+AGG 0.584861 2:-15105238 None:intergenic
GTGACCATCAAGAAGGGATA+GGG 0.586087 2:-15105101 None:intergenic
ATATGTTTGTTGGAATCCGT+CGG 0.586941 2:+15105572 MsG0280007416.01.T01:CDS
GTTCGTGAAGAGGAACCTAC+AGG 0.587140 2:+15105250 MsG0280007416.01.T01:CDS
TCTACACGGCTGGGTTGTGG+TGG 0.587866 2:-15104956 None:intergenic
GTGGTGATCAGGTGTCTCAA+GGG 0.590017 2:-15105469 None:intergenic
AACTAAAGAATCGGTTATGG+CGG 0.592037 2:+15105621 MsG0280007416.01.T01:CDS
GACTTCATCAGTATGAGGAT+CGG 0.593232 2:-15105167 None:intergenic
GAAACAATTTCATCACCTGT+AGG 0.594064 2:-15105265 None:intergenic
ATATATATTATAGGTTAACT+GGG 0.595356 2:+15106852 MsG0280007416.01.T01:intron
AGGGAGTTCCACGGTAGACA+TGG 0.596664 2:-15105450 None:intergenic
CTATCCCTTCTTGATGGTCA+CGG 0.597434 2:+15105103 MsG0280007416.01.T01:CDS
AAGGACCGTGACCATCAAGA+AGG 0.601243 2:-15105108 None:intergenic
TGTTTAGTTTCGAGGTCAAG+CGG 0.603245 2:-15105373 None:intergenic
GGTAAGATGATACATCCTGT+TGG 0.604159 2:+15107363 MsG0280007416.01.T01:CDS
TCACAAAACCCGTCAATCGT+AGG 0.607355 2:-15105691 None:intergenic
TAGTTTCGAGGTCAAGCGGT+GGG 0.611231 2:-15105369 None:intergenic
TGAACACAACCATCAGTGAT+GGG 0.614197 2:-15105211 None:intergenic
GCCAAATCTTTGGTTCTACA+CGG 0.618346 2:-15104970 None:intergenic
ATTGATGTCGCGCAAGAACG+AGG 0.619010 2:-15105343 None:intergenic
TCCTCTTCACGAACCTCAGT+AGG 0.621000 2:-15105241 None:intergenic
AGAGTTGGAAGTAGTTCCTG+TGG 0.623129 2:-15107136 None:intergenic
TATACCTCAAGCATGCGCCA+TGG 0.631418 2:-15105865 None:intergenic
TCCAAAGCAAAGCCCTTGGG+AGG 0.633549 2:+15106897 MsG0280007416.01.T01:CDS
GTAACAGACAGTGCTTGAGA+TGG 0.633974 2:-15105397 None:intergenic
AAATTAGTTCAACCTCCCAA+GGG 0.635245 2:-15106909 None:intergenic
CACCAAACTTAGTATGCCGA+CGG 0.637276 2:-15105588 None:intergenic
AGGACCGTGACCATCAAGAA+GGG 0.643039 2:-15105107 None:intergenic
CTATCTGATGCTAATAATGG+TGG 0.650418 2:+15105307 MsG0280007416.01.T01:CDS
AAAAGGCTTAGAGTTGCTCA+GGG 0.650442 2:+15106970 MsG0280007416.01.T01:CDS
GCATGTTCTAAGTGACCTTG+CGG 0.653451 2:-15105052 None:intergenic
TGTCGCGCAAGAACGAGGTA+CGG 0.658162 2:-15105338 None:intergenic
GACGAAAAGAAACTCGTCTG+CGG 0.661354 2:+15105511 MsG0280007416.01.T01:CDS
GGGTTGTGGTGGAGACATGG+CGG 0.664200 2:-15104945 None:intergenic
GAGTTTCGCCATGTCTACCG+TGG 0.667413 2:+15105442 MsG0280007416.01.T01:CDS
CGTCAAACTTTGTCTCAAAG+GGG 0.667527 2:-15107287 None:intergenic
TCAACGGCCGATACAATGCA+AGG 0.667965 2:-15105136 None:intergenic
AGGATCGGCGAGGTAATCAA+CGG 0.669436 2:-15105152 None:intergenic
GGTGTCTCAAGGGAGTTCCA+CGG 0.685317 2:-15105459 None:intergenic
CCAGACTTTGCCATGAACGT+CGG 0.685939 2:-15105419 None:intergenic
TTAGTTTCGAGGTCAAGCGG+TGG 0.704813 2:-15105370 None:intergenic
CATCAGTATGAGGATCGGCG+AGG 0.728455 2:-15105162 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATATATTATAGGTTAAC+TGG + Chr2:15106851-15106870 MsG0280007416.01.T01:intron 15.0%
!! ATATATATTATAGGTTAACT+GGG + Chr2:15106852-15106871 MsG0280007416.01.T01:intron 15.0%
!! ATCATATAAATGATTAATGT+TGG + Chr2:15106807-15106826 MsG0280007416.01.T01:intron 15.0%
!! TAAACATATATGTAAACAAA+CGG - Chr2:15106553-15106572 None:intergenic 15.0%
!! TTCATCTCAATATATATTAT+AGG + Chr2:15106843-15106862 MsG0280007416.01.T01:intron 15.0%
!! AATTATTTCAGAAGTTGAAA+TGG + Chr2:15106509-15106528 MsG0280007416.01.T01:intron 20.0%
!! ATTATTTCAGAAGTTGAAAT+GGG + Chr2:15106510-15106529 MsG0280007416.01.T01:intron 20.0%
!! GTTAAAATTAATATCCTACT+TGG - Chr2:15106728-15106747 None:intergenic 20.0%
!! TAAAATCAATGAAGTTAATG+TGG - Chr2:15106466-15106485 None:intergenic 20.0%
!! TTATGAACAATTATATGCAA+AGG + Chr2:15106054-15106073 MsG0280007416.01.T01:intron 20.0%
!! TTCATTGAGAAAAATTCAAT+GGG + Chr2:15107180-15107199 MsG0280007416.01.T01:CDS 20.0%
!! TTTATGAAAAAGAAATCATC+TGG + Chr2:15105547-15105566 MsG0280007416.01.T01:CDS 20.0%
!! TTTCATTGAGAAAAATTCAA+TGG + Chr2:15107179-15107198 MsG0280007416.01.T01:CDS 20.0%
!!! ATTTTTCTCAATGAAATCAT+TGG - Chr2:15107175-15107194 None:intergenic 20.0%
!!! TAAACTTTTGAATGAAGTTT+AGG - Chr2:15105025-15105044 None:intergenic 20.0%
!!! TTTCTAAAAAAACAAGCAAA+TGG - Chr2:15106376-15106395 None:intergenic 20.0%
! AAAAAACAACAACGATGTAT+TGG - Chr2:15106330-15106349 None:intergenic 25.0%
! AAAAACAACAACGATGTATT+GGG - Chr2:15106329-15106348 None:intergenic 25.0%
! AAATACTCTTAATTCCAAGT+AGG + Chr2:15106711-15106730 MsG0280007416.01.T01:intron 25.0%
! AACATTAGCACATCTATATT+TGG + Chr2:15107231-15107250 MsG0280007416.01.T01:CDS 25.0%
! AATATAGATGTGCTAATGTT+TGG - Chr2:15107231-15107250 None:intergenic 25.0%
! AATTAAAACTGATACATCCT+TGG - Chr2:15106658-15106677 None:intergenic 25.0%
! ACAATTATATGCAAAGGATA+TGG + Chr2:15106060-15106079 MsG0280007416.01.T01:intron 25.0%
! ATTAAAACTGATACATCCTT+GGG - Chr2:15106657-15106676 None:intergenic 25.0%
! GAAACTTTATACACTATTGA+TGG + Chr2:15106486-15106505 MsG0280007416.01.T01:intron 25.0%
! GTGTGATAAACATGATAAAT+TGG + Chr2:15106241-15106260 MsG0280007416.01.T01:intron 25.0%
! TAAATACCTAATACATCCAT+AGG - Chr2:15106150-15106169 None:intergenic 25.0%
! TATGTATCTATACAAGTCAA+TGG - Chr2:15106776-15106795 None:intergenic 25.0%
! TCTCTCTATATTATCTAATG+AGG - Chr2:15107001-15107020 None:intergenic 25.0%
! TGCTAAGATAACTAAAGAAT+CGG + Chr2:15105612-15105631 MsG0280007416.01.T01:CDS 25.0%
! TGGATGTATTAGGTATTTAT+AGG + Chr2:15106151-15106170 MsG0280007416.01.T01:intron 25.0%
!! GATTGTGATACTTTTATTGA+GGG + Chr2:15107084-15107103 MsG0280007416.01.T01:CDS 25.0%
!! TTTTTATGAATTGAATGCCT+AGG - Chr2:15106752-15106771 None:intergenic 25.0%
!!! GGAATTAAGAGTATTTACAA+TGG - Chr2:15106707-15106726 None:intergenic 25.0%
!!! GGATATTAATTTTAACTCCT+AGG + Chr2:15106732-15106751 MsG0280007416.01.T01:intron 25.0%
ACCATTATTAGCATCAGATA+GGG - Chr2:15105308-15105327 None:intergenic 30.0%
ATATTATAGGTTAACTGGGA+TGG + Chr2:15106856-15106875 MsG0280007416.01.T01:intron 30.0%
ATCCAACAATGTTTGATTCA+AGG - Chr2:15107067-15107086 None:intergenic 30.0%
ATCCTTGAATCAAACATTGT+TGG + Chr2:15107062-15107081 MsG0280007416.01.T01:CDS 30.0%
ATGAAGATTAACTGGAATTG+TGG + Chr2:15105748-15105767 MsG0280007416.01.T01:CDS 30.0%
ATGATGATTCTTCAAAGAGA+TGG + Chr2:15105797-15105816 MsG0280007416.01.T01:CDS 30.0%
GATAACTAAAGAATCGGTTA+TGG + Chr2:15105618-15105637 MsG0280007416.01.T01:CDS 30.0%
GTACTATTGAAGATGCTTAA+AGG - Chr2:15106405-15106424 None:intergenic 30.0%
TGTGGTATGACTCATAAAAA+AGG - Chr2:15106448-15106467 None:intergenic 30.0%
TTCAAAATGCTATGGTTAAG+AGG - Chr2:15107267-15107286 None:intergenic 30.0%
TTCCAACTCTTTCAATGATA+GGG + Chr2:15107149-15107168 MsG0280007416.01.T01:CDS 30.0%
TTGAGAAAAATTCAATGGGA+AGG + Chr2:15107184-15107203 MsG0280007416.01.T01:CDS 30.0%
TTTCAATCCTTGCATTGTAT+CGG + Chr2:15105129-15105148 MsG0280007416.01.T01:CDS 30.0%
! AAAGAGATGGTCAGTTTTTA+AGG + Chr2:15105810-15105829 MsG0280007416.01.T01:CDS 30.0%
! AAAGTTTACTATTTTCCGCA+AGG + Chr2:15105037-15105056 MsG0280007416.01.T01:CDS 30.0%
! AAGAGATGGTCAGTTTTTAA+GGG + Chr2:15105811-15105830 MsG0280007416.01.T01:CDS 30.0%
! AATCTATGCTCAAGTGATTT+TGG + Chr2:15106096-15106115 MsG0280007416.01.T01:intron 30.0%
! ATCTATGCTCAAGTGATTTT+GGG + Chr2:15106097-15106116 MsG0280007416.01.T01:intron 30.0%
! GGATTGTGATACTTTTATTG+AGG + Chr2:15107083-15107102 MsG0280007416.01.T01:CDS 30.0%
! TTAGTAGCTTTGCAATCTAT+AGG + Chr2:15106003-15106022 MsG0280007416.01.T01:intron 30.0%
AAATTAGTTCAACCTCCCAA+GGG - Chr2:15106912-15106931 None:intergenic 35.0%
AACCACGCATCATCAAATTA+TGG - Chr2:15105976-15105995 None:intergenic 35.0%
AACTAAAGAATCGGTTATGG+CGG + Chr2:15105621-15105640 MsG0280007416.01.T01:CDS 35.0%
ACAAAGACTTCATCAGTATG+AGG - Chr2:15105175-15105194 None:intergenic 35.0%
ACCCTATCTGATGCTAATAA+TGG + Chr2:15105304-15105323 MsG0280007416.01.T01:CDS 35.0%
AGGATGCAATGAAGATTAAC+TGG + Chr2:15105740-15105759 MsG0280007416.01.T01:CDS 35.0%
AGTATTATCCTACGATTGAC+GGG + Chr2:15105683-15105702 MsG0280007416.01.T01:CDS 35.0%
CAAGCAAATGGATAGAAGTA+TGG - Chr2:15106364-15106383 None:intergenic 35.0%
CACCATTATTAGCATCAGAT+AGG - Chr2:15105309-15105328 None:intergenic 35.0%
CCAAATAGCATAAATGAACC+AGG - Chr2:15107345-15107364 None:intergenic 35.0%
CCTGGTTCATTTATGCTATT+TGG + Chr2:15107342-15107361 MsG0280007416.01.T01:CDS 35.0%
CTATCTGATGCTAATAATGG+TGG + Chr2:15105307-15105326 MsG0280007416.01.T01:CDS 35.0%
CTATTGAAGATGCTTAAAGG+AGG - Chr2:15106402-15106421 None:intergenic 35.0%
CTGGAAATCTATCATTGGAA+TGG - Chr2:15107028-15107047 None:intergenic 35.0%
CTTCCAACTCTTTCAATGAT+AGG + Chr2:15107148-15107167 MsG0280007416.01.T01:CDS 35.0%
GAAAAATTCAATGGGAAGGT+TGG + Chr2:15107188-15107207 MsG0280007416.01.T01:CDS 35.0%
GAAACAATTTCATCACCTGT+AGG - Chr2:15105268-15105287 None:intergenic 35.0%
GAATGCTGGAAATCTATCAT+TGG - Chr2:15107033-15107052 None:intergenic 35.0%
GAGAAGTTGAATGAATGTTG+TGG + Chr2:15106292-15106311 MsG0280007416.01.T01:intron 35.0%
GAGTATTATCCTACGATTGA+CGG + Chr2:15105682-15105701 MsG0280007416.01.T01:CDS 35.0%
GATACAATGCAAGGATTGAA+AGG - Chr2:15105130-15105149 None:intergenic 35.0%
TCATCTGGAGATATGTTTGT+TGG + Chr2:15105562-15105581 MsG0280007416.01.T01:CDS 35.0%
TCATGCAAATTACTTCCAAC+AGG - Chr2:15107381-15107400 None:intergenic 35.0%
TGAACCAGGATTAACTTCTT+TGG - Chr2:15107331-15107350 None:intergenic 35.0%
TGTGGAAAAAAGACTGTCTT+GGG - Chr2:15107121-15107140 None:intergenic 35.0%
TTGGAGCAAGTTAAGTTTGT+AGG - Chr2:15106629-15106648 None:intergenic 35.0%
TTTGGATTATGTGAGACTTC+AGG - Chr2:15106883-15106902 None:intergenic 35.0%
! ATATGTTTGTTGGAATCCGT+CGG + Chr2:15105572-15105591 MsG0280007416.01.T01:CDS 35.0%
!! TTCCATAATTTGATGATGCG+TGG + Chr2:15105971-15105990 MsG0280007416.01.T01:intron 35.0%
AAAAAGGCTTAGAGTTGCTC+AGG + Chr2:15106969-15106988 MsG0280007416.01.T01:CDS 40.0%
AAAAGGCTTAGAGTTGCTCA+GGG + Chr2:15106970-15106989 MsG0280007416.01.T01:CDS 40.0%
AAGGGAGAAGATGGTTGTAT+GGG + Chr2:15107411-15107430 MsG0280007416.01.T01:CDS 40.0%
ACCGTCAAACTTTGTCTCAA+AGG - Chr2:15107292-15107311 None:intergenic 40.0%
AGCACCAAAGAAGTTAATCC+TGG + Chr2:15107324-15107343 MsG0280007416.01.T01:CDS 40.0%
ATAATCCAAAGCAAAGCCCT+TGG + Chr2:15106893-15106912 MsG0280007416.01.T01:CDS 40.0%
CAAAGGGGTTCAAAATGCTA+TGG - Chr2:15107275-15107294 None:intergenic 40.0%
CACGAACTTACTCCAATTAG+TGG - Chr2:15105491-15105510 None:intergenic 40.0%
CACTAATTGGAGTAAGTTCG+TGG + Chr2:15105489-15105508 MsG0280007416.01.T01:CDS 40.0%
CCGTCAAACTTTGTCTCAAA+GGG - Chr2:15107291-15107310 None:intergenic 40.0%
CGTCAAACTTTGTCTCAAAG+GGG - Chr2:15107290-15107309 None:intergenic 40.0%
CTGTGGAAAAAAGACTGTCT+TGG - Chr2:15107122-15107141 None:intergenic 40.0%
GAAATTAGTTCAACCTCCCA+AGG - Chr2:15106913-15106932 None:intergenic 40.0%
GACTTCATCAGTATGAGGAT+CGG - Chr2:15105170-15105189 None:intergenic 40.0%
GCTTCTCCTATGGATGTATT+AGG + Chr2:15106141-15106160 MsG0280007416.01.T01:intron 40.0%
GGTAAGATGATACATCCTGT+TGG + Chr2:15107363-15107382 MsG0280007416.01.T01:CDS 40.0%
GGTGATGAAATTGTTTCCTC+TGG + Chr2:15105271-15105290 MsG0280007416.01.T01:CDS 40.0%
GTGTAGAACCAAAGATTTGG+CGG + Chr2:15104972-15104991 MsG0280007416.01.T01:CDS 40.0%
TAATCCAAAGCAAAGCCCTT+GGG + Chr2:15106894-15106913 MsG0280007416.01.T01:CDS 40.0%
TACAATTGCCCTCAGCAAAA+AGG + Chr2:15106953-15106972 MsG0280007416.01.T01:CDS 40.0%
TACTCCAATTAGTGGTGATC+AGG - Chr2:15105483-15105502 None:intergenic 40.0%
TGAACACAACCATCAGTGAT+GGG - Chr2:15105214-15105233 None:intergenic 40.0%
TTGCATGATTCTGCTACCAA+GGG + Chr2:15107393-15107412 MsG0280007416.01.T01:CDS 40.0%
TTTGCATGATTCTGCTACCA+AGG + Chr2:15107392-15107411 MsG0280007416.01.T01:CDS 40.0%
! AACTCTAAGCCTTTTTGCTG+AGG - Chr2:15106965-15106984 None:intergenic 40.0%
! ACTCTAAGCCTTTTTGCTGA+GGG - Chr2:15106964-15106983 None:intergenic 40.0%
! GATACATCCTTGGGAACTTT+TGG - Chr2:15106648-15106667 None:intergenic 40.0%
! TAGGGTTAGAGTTTTTCCAG+AGG - Chr2:15105290-15105309 None:intergenic 40.0%
! TGTTTAGTTTCGAGGTCAAG+CGG - Chr2:15105376-15105395 None:intergenic 40.0%
!! AGGAATTTTGACAGAGTGTC+CGG - Chr2:15105005-15105024 None:intergenic 40.0%
!! CCCTTTGAGACAAAGTTTGA+CGG + Chr2:15107288-15107307 MsG0280007416.01.T01:CDS 40.0%
!! GCCAAATCTTTGGTTCTACA+CGG - Chr2:15104973-15104992 None:intergenic 40.0%
!!! AGGATTTTGCTGTTGAATGC+TGG - Chr2:15107047-15107066 None:intergenic 40.0%
!!! CAAGACAGTCTTTTTTCCAC+AGG + Chr2:15107120-15107139 MsG0280007416.01.T01:CDS 40.0%
!!! TGACGGGTTTTGTGATTTTG+TGG + Chr2:15105699-15105718 MsG0280007416.01.T01:CDS 40.0%
AAGGGATAGGGTTTCAGTGT+TGG - Chr2:15105092-15105111 None:intergenic 45.0%
ACTTGCTCCAAAAGTTCCCA+AGG + Chr2:15106638-15106657 MsG0280007416.01.T01:intron 45.0%
AGAGTTGGAAGTAGTTCCTG+TGG - Chr2:15107139-15107158 None:intergenic 45.0%
AGGGATAGGGTTTCAGTGTT+GGG - Chr2:15105091-15105110 None:intergenic 45.0%
ATCCGTCGGCATACTAAGTT+TGG + Chr2:15105586-15105605 MsG0280007416.01.T01:CDS 45.0%
CAAACGGTGAGACAACTTCT+TGG - Chr2:15106537-15106556 None:intergenic 45.0%
CAACGAAGATGCTTCTCCTA+TGG + Chr2:15106131-15106150 MsG0280007416.01.T01:intron 45.0%
CAAGGGAGAAGATGGTTGTA+TGG + Chr2:15107410-15107429 MsG0280007416.01.T01:CDS 45.0%
CACCAAACTTAGTATGCCGA+CGG - Chr2:15105591-15105610 None:intergenic 45.0%
CATACAACCATCTTCTCCCT+TGG - Chr2:15107412-15107431 None:intergenic 45.0%
CATTGCATCCTCAACAACCT+TGG - Chr2:15105731-15105750 None:intergenic 45.0%
GAAACCCTATCCCTTCTTGA+TGG + Chr2:15105097-15105116 MsG0280007416.01.T01:CDS 45.0%
GACACCTGATCACCACTAAT+TGG + Chr2:15105476-15105495 MsG0280007416.01.T01:CDS 45.0%
GACGAAAAGAAACTCGTCTG+CGG + Chr2:15105511-15105530 MsG0280007416.01.T01:CDS 45.0%
GCCGTGTAGAACCAAAGATT+TGG + Chr2:15104969-15104988 MsG0280007416.01.T01:CDS 45.0%
GGCAATTGTAGATTCAGTGC+AGG - Chr2:15106943-15106962 None:intergenic 45.0%
GGCCCTATCATTGAAAGAGT+TGG - Chr2:15107154-15107173 None:intergenic 45.0%
GTAACAGACAGTGCTTGAGA+TGG - Chr2:15105400-15105419 None:intergenic 45.0%
GTGAACACAACCATCAGTGA+TGG - Chr2:15105215-15105234 None:intergenic 45.0%
GTGACCATCAAGAAGGGATA+GGG - Chr2:15105104-15105123 None:intergenic 45.0%
TCACAAAACCCGTCAATCGT+AGG - Chr2:15105694-15105713 None:intergenic 45.0%
! AACCATCAGTGATGGGAGTT+AGG - Chr2:15105207-15105226 None:intergenic 45.0%
! CTATCCCTTCTTGATGGTCA+CGG + Chr2:15105103-15105122 MsG0280007416.01.T01:CDS 45.0%
! GAGATGGCTGTTTAGTTTCG+AGG - Chr2:15105384-15105403 None:intergenic 45.0%
! GCATGTTCTAAGTGACCTTG+CGG - Chr2:15105055-15105074 None:intergenic 45.0%
! GGAGACATGGCGGAAATATT+TGG - Chr2:15104938-15104957 None:intergenic 45.0%
! TTTCAGTGTTGGGGGGATTA+GGG - Chr2:15105081-15105100 None:intergenic 45.0%
!! AATCTTTGGTTCTACACGGC+TGG - Chr2:15104969-15104988 None:intergenic 45.0%
!! ATCTTTGGTTCTACACGGCT+GGG - Chr2:15104968-15104987 None:intergenic 45.0%
!! CATAGGAGAAGCATCTTCGT+TGG - Chr2:15106133-15106152 None:intergenic 45.0%
!! CGGGTTTTGTGATTTTGTGG+TGG + Chr2:15105702-15105721 MsG0280007416.01.T01:CDS 45.0%
!! TTCTTTGGTGCTGCACTTGT+GGG - Chr2:15107316-15107335 None:intergenic 45.0%
!!! TGATTTTGTGGTGGATGCCA+AGG + Chr2:15105711-15105730 MsG0280007416.01.T01:CDS 45.0%
AAGGACCGTGACCATCAAGA+AGG - Chr2:15105111-15105130 None:intergenic 50.0%
AGGACCGTGACCATCAAGAA+GGG - Chr2:15105110-15105129 None:intergenic 50.0%
AGGATCGGCGAGGTAATCAA+CGG - Chr2:15105155-15105174 None:intergenic 50.0%
AGTGGTGATCAGGTGTCTCA+AGG - Chr2:15105473-15105492 None:intergenic 50.0%
ATTGATGTCGCGCAAGAACG+AGG - Chr2:15105346-15105365 None:intergenic 50.0%
CCAGACTTTGCCATGAACGT+CGG - Chr2:15105422-15105441 None:intergenic 50.0%
CGACGTTCATGGCAAAGTCT+GGG + Chr2:15105420-15105439 MsG0280007416.01.T01:CDS 50.0%
CGTGACCATCAAGAAGGGAT+AGG - Chr2:15105105-15105124 None:intergenic 50.0%
CTCCTAACTCCCATCACTGA+TGG + Chr2:15105202-15105221 MsG0280007416.01.T01:CDS 50.0%
CTGTCTGTTACCGACGTTCA+TGG + Chr2:15105409-15105428 MsG0280007416.01.T01:CDS 50.0%
GGGATAGGGTTTCAGTGTTG+GGG - Chr2:15105090-15105109 None:intergenic 50.0%
GTGGTGATCAGGTGTCTCAA+GGG - Chr2:15105472-15105491 None:intergenic 50.0%
GTTCGTGAAGAGGAACCTAC+AGG + Chr2:15105250-15105269 MsG0280007416.01.T01:CDS 50.0%
TAGTTTCGAGGTCAAGCGGT+GGG - Chr2:15105372-15105391 None:intergenic 50.0%
TATACCTCAAGCATGCGCCA+TGG - Chr2:15105868-15105887 None:intergenic 50.0%
TCAACGGCCGATACAATGCA+AGG - Chr2:15105139-15105158 None:intergenic 50.0%
TCCTACTGAGGTTCGTGAAG+AGG + Chr2:15105240-15105259 MsG0280007416.01.T01:CDS 50.0%
TCCTCTTCACGAACCTCAGT+AGG - Chr2:15105244-15105263 None:intergenic 50.0%
TCTCTGCTCCTAATCGTCCA+TGG + Chr2:15105848-15105867 MsG0280007416.01.T01:CDS 50.0%
TCTGCTACCAAGGGAGAAGA+TGG + Chr2:15107402-15107421 MsG0280007416.01.T01:CDS 50.0%
TCTTCACGAACCTCAGTAGG+AGG - Chr2:15105241-15105260 None:intergenic 50.0%
TGTTCACGAACCTCCTACTG+AGG + Chr2:15105228-15105247 MsG0280007416.01.T01:CDS 50.0%
TTAGTTTCGAGGTCAAGCGG+TGG - Chr2:15105373-15105392 None:intergenic 50.0%
! GATAGGGTTTCAGTGTTGGG+GGG - Chr2:15105088-15105107 None:intergenic 50.0%
! GGATAGGGTTTCAGTGTTGG+GGG - Chr2:15105089-15105108 None:intergenic 50.0%
! GTTTCAGTGTTGGGGGGATT+AGG - Chr2:15105082-15105101 None:intergenic 50.0%
!! CTTCTTTGGTGCTGCACTTG+TGG - Chr2:15107317-15107336 None:intergenic 50.0%
!! TCTTTGGTGCTGCACTTGTG+GGG - Chr2:15107315-15107334 None:intergenic 50.0%
ACCTCCCAAGGGCTTTGCTT+TGG - Chr2:15106901-15106920 None:intergenic 55.0%
AGAATCGGTTATGGCGGCAG+CGG + Chr2:15105627-15105646 MsG0280007416.01.T01:CDS 55.0%
AGCATGCGCCATGGACGATT+AGG - Chr2:15105859-15105878 None:intergenic 55.0%
AGGGAGTTCCACGGTAGACA+TGG - Chr2:15105453-15105472 None:intergenic 55.0%
CATCAGTATGAGGATCGGCG+AGG - Chr2:15105165-15105184 None:intergenic 55.0%
CCGACGTTCATGGCAAAGTC+TGG + Chr2:15105419-15105438 MsG0280007416.01.T01:CDS 55.0%
GAGTTTCGCCATGTCTACCG+TGG + Chr2:15105442-15105461 MsG0280007416.01.T01:CDS 55.0%
GGTGGATGCCAAGGTTGTTG+AGG + Chr2:15105720-15105739 MsG0280007416.01.T01:CDS 55.0%
GGTGTCTCAAGGGAGTTCCA+CGG - Chr2:15105462-15105481 None:intergenic 55.0%
TCCAAAGCAAAGCCCTTGGG+AGG + Chr2:15106897-15106916 MsG0280007416.01.T01:CDS 55.0%
TGTCGCGCAAGAACGAGGTA+CGG - Chr2:15105341-15105360 None:intergenic 55.0%
GCGCAGCACCGCCAAATCTT+TGG - Chr2:15104983-15105002 None:intergenic 60.0%
GGTTCTACACGGCTGGGTTG+TGG - Chr2:15104962-15104981 None:intergenic 60.0%
TCGTCCATGGCGCATGCTTG+AGG + Chr2:15105861-15105880 MsG0280007416.01.T01:CDS 60.0%
TCTACACGGCTGGGTTGTGG+TGG - Chr2:15104959-15104978 None:intergenic 60.0%
! GCTGGGTTGTGGTGGAGACA+TGG - Chr2:15104951-15104970 None:intergenic 60.0%
! GGGTTGTGGTGGAGACATGG+CGG - Chr2:15104948-15104967 None:intergenic 60.0%
!! AAGATTTGGCGGTGCTGCGC+CGG + Chr2:15104983-15105002 MsG0280007416.01.T01:CDS 60.0%
GGTTATGGCGGCAGCGGAGT+TGG + Chr2:15105633-15105652 MsG0280007416.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr2 gene 15104926 15107446 15104926 ID=MsG0280007416.01;Name=MsG0280007416.01
Chr2 mRNA 15104926 15107446 15104926 ID=MsG0280007416.01.T01;Parent=MsG0280007416.01;Name=MsG0280007416.01.T01;_AED=0.41;_eAED=0.41;_QI=0|0|0|1|1|1|2|0|512
Chr2 exon 15104926 15105882 15104926 ID=MsG0280007416.01.T01:exon:935;Parent=MsG0280007416.01.T01
Chr2 exon 15106865 15107446 15106865 ID=MsG0280007416.01.T01:exon:936;Parent=MsG0280007416.01.T01
Chr2 CDS 15104926 15105882 15104926 ID=MsG0280007416.01.T01:cds;Parent=MsG0280007416.01.T01
Chr2 CDS 15106865 15107446 15106865 ID=MsG0280007416.01.T01:cds;Parent=MsG0280007416.01.T01
Gene Sequence

>MsG0280007416.01.T01

ATGGTAGAACCAAATATTTCCGCCATGTCTCCACCACAACCCAGCCGTGTAGAACCAAAGATTTGGCGGTGCTGCGCCGGACACTCTGTCAAAATTCCTAAACTTCATTCAAAAGTTTACTATTTTCCGCAAGGTCACTTAGAACATGCTTGCCCTAATCCCCCCAACACTGAAACCCTATCCCTTCTTGATGGTCACGGTCCTTTCAATCCTTGCATTGTATCGGCCGTTGATTACCTCGCCGATCCTCATACTGATGAAGTCTTTGTCAAACTTCTCCTAACTCCCATCACTGATGGTTGTGTTCACGAACCTCCTACTGAGGTTCGTGAAGAGGAACCTACAGGTGATGAAATTGTTTCCTCTGGAAAAACTCTAACCCTATCTGATGCTAATAATGGTGGTGCATTCTCCGTACCTCGTTCTTGCGCGACATCAATCTTCCCACCGCTTGACCTCGAAACTAAACAGCCATCTCAAGCACTGTCTGTTACCGACGTTCATGGCAAAGTCTGGGAGTTTCGCCATGTCTACCGTGGAACTCCCTTGAGACACCTGATCACCACTAATTGGAGTAAGTTCGTGGACGAAAAGAAACTCGTCTGCGGCGATTCTGTAATTTTTATGAAAAAGAAATCATCTGGAGATATGTTTGTTGGAATCCGTCGGCATACTAAGTTTGGTGCTGCTAAGATAACTAAAGAATCGGTTATGGCGGCAGCGGAGTTGGCAGATAAGAATATCGCTTTTGAAGTTGAGTATTATCCTACGATTGACGGGTTTTGTGATTTTGTGGTGGATGCCAAGGTTGTTGAGGATGCAATGAAGATTAACTGGAATTGTGGAATGAGAATTAAATTTTCTTTGAAGAATGATGATTCTTCAAAGAGATGGTCAGTTTTTAAGGGTACAATATCTGCTCTCTCTGCTCCTAATCGTCCATGGCGCATGCTTGAGGTTAACTGGGATGGACCTGAAGTCTCACATAATCCAAAGCAAAGCCCTTGGGAGGTTGAACTAATTTCTTATATACCTGCACTGAATCTACAATTGCCCTCAGCAAAAAGGCTTAGAGTTGCTCAGGGTTATACCTCATTAGATAATATAGAGAGATCTTCCATTCCAATGATAGATTTCCAGCATTCAACAGCAAAATCCTTGAATCAAACATTGTTGGATTGTGATACTTTTATTGAGGGCATGCAGAGAGCCCAAGACAGTCTTTTTTCCACAGGAACTACTTCCAACTCTTTCAATGATAGGGCCAATGATTTCATTGAGAAAAATTCAATGGGAAGGTTGGATATTGTGTCAACTGAGCCAAACATTAGCACATCTATATTTGGTGACTTGTCACCTCTTAACCATAGCATTTTGAACCCCTTTGAGACAAAGTTTGACGGTCCCCACAAGTGCAGCACCAAAGAAGTTAATCCTGGTTCATTTATGCTATTTGGTAAGATGATACATCCTGTTGGAAGTAATTTGCATGATTCTGCTACCAAGGGAGAAGATGGTTGTATGGGCTGCAATAATTGA
Protein sequence

>MsG0280007416.01.T01

MVEPNISAMSPPQPSRVEPKIWRCCAGHSVKIPKLHSKVYYFPQGHLEHACPNPPNTETLSLLDGHGPFNPCIVSAVDYLADPHTDEVFVKLLLTPITDGCVHEPPTEVREEEPTGDEIVSSGKTLTLSDANNGGAFSVPRSCATSIFPPLDLETKQPSQALSVTDVHGKVWEFRHVYRGTPLRHLITTNWSKFVDEKKLVCGDSVIFMKKKSSGDMFVGIRRHTKFGAAKITKESVMAAAELADKNIAFEVEYYPTIDGFCDFVVDAKVVEDAMKINWNCGMRIKFSLKNDDSSKRWSVFKGTISALSAPNRPWRMLEVNWDGPEVSHNPKQSPWEVELISYIPALNLQLPSAKRLRVAQGYTSLDNIERSSIPMIDFQHSTAKSLNQTLLDCDTFIEGMQRAQDSLFSTGTTSNSFNDRANDFIEKNSMGRLDIVSTEPNISTSIFGDLSPLNHSILNPFETKFDGPHKCSTKEVNPGSFMLFGKMIHPVGSNLHDSATKGEDGCMGCNN*