AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280007472.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007472.01.T01 MTR_2g030380 84.685 111 16 1 16 126 856 965 2.09e-61 202
MsG0280007472.01.T01 MTR_2g030380 84.685 111 16 1 16 126 874 983 2.18e-61 202
MsG0280007472.01.T01 MTR_2g077970 58.559 111 28 2 16 126 7 99 4.78e-39 127
MsG0280007472.01.T01 MTR_3g094710 55.556 108 46 2 19 126 845 950 1.06e-32 120
MsG0280007472.01.T01 MTR_5g087780 50.926 108 52 1 19 126 803 909 1.57e-31 117
MsG0280007472.01.T01 MTR_5g083480 45.631 103 52 3 24 126 590 688 3.67e-18 79.3
MsG0280007472.01.T01 MTR_5g083480 45.631 103 52 3 24 126 593 691 3.67e-18 79.3
MsG0280007472.01.T01 MTR_2g090410 40.952 105 56 4 24 126 442 542 8.60e-15 69.7
MsG0280007472.01.T01 MTR_2g090410 40.741 108 53 6 24 126 1144 1245 3.00e-12 62.8
MsG0280007472.01.T01 MTR_1g116520 40.000 115 57 7 16 126 208 314 1.48e-14 68.9
MsG0280007472.01.T01 MTR_2g104790 44.340 106 49 6 24 126 216 314 2.23e-14 68.6
MsG0280007472.01.T01 MTR_1g116520 40.000 115 57 7 16 126 167 273 3.47e-14 67.8
MsG0280007472.01.T01 MTR_4g094885 44.231 104 51 5 23 126 457 553 3.88e-14 67.8
MsG0280007472.01.T01 MTR_3g068025 40.000 105 57 4 24 126 443 543 6.99e-14 67.0
MsG0280007472.01.T01 MTR_7g059225 39.252 107 59 4 22 126 475 577 1.11e-13 66.6
MsG0280007472.01.T01 MTR_5g023980 36.134 119 66 6 12 126 170 282 1.13e-13 66.6
MsG0280007472.01.T01 MTR_2g011150 41.121 107 54 6 24 126 555 656 2.32e-13 65.9
MsG0280007472.01.T01 MTR_4g113100 34.862 109 63 3 18 126 437 537 2.48e-13 65.5
MsG0280007472.01.T01 MTR_5g035910 39.048 105 58 4 24 126 440 540 2.91e-13 65.5
MsG0280007472.01.T01 MTR_7g063010 39.048 105 58 4 24 126 433 533 3.69e-13 65.1
MsG0280007472.01.T01 MTR_6g088785 39.623 106 57 5 24 126 801 902 3.73e-13 65.1
MsG0280007472.01.T01 MTR_5g086330 31.298 131 78 6 3 126 13 138 3.78e-13 63.9
MsG0280007472.01.T01 MTR_4g005130 39.450 109 48 7 23 126 592 687 4.23e-13 65.1
MsG0280007472.01.T01 MTR_7g062990 39.048 105 58 4 24 126 441 541 4.67e-13 64.7
MsG0280007472.01.T01 MTR_3g106320 42.991 107 49 7 24 126 194 292 5.48e-13 64.7
MsG0280007472.01.T01 MTR_1g020060 36.283 113 61 6 19 126 140 246 5.56e-13 64.3
MsG0280007472.01.T01 MTR_7g063030 39.048 105 58 4 24 126 431 531 5.93e-13 64.7
MsG0280007472.01.T01 MTR_7g063030 39.048 105 58 4 24 126 437 537 5.94e-13 64.7
MsG0280007472.01.T01 MTR_5g025020 37.719 114 59 6 18 125 454 561 6.15e-13 64.3
MsG0280007472.01.T01 MTR_8g064690 39.640 111 61 4 18 126 398 504 6.61e-13 64.3
MsG0280007472.01.T01 MTR_2g105680 34.884 129 72 6 6 126 864 988 6.64e-13 64.3
MsG0280007472.01.T01 MTR_3g084510 38.261 115 47 6 23 126 682 783 6.76e-13 64.3
MsG0280007472.01.T01 MTR_4g070970 39.623 106 57 5 24 126 745 846 8.96e-13 63.9
MsG0280007472.01.T01 MTR_4g014070 39.604 101 57 3 26 126 600 696 1.09e-12 63.9
MsG0280007472.01.T01 MTR_1g028890 36.538 104 55 5 23 126 386 478 1.11e-12 63.9
MsG0280007472.01.T01 MTR_2g090710 38.889 108 57 6 24 126 787 890 1.17e-12 63.9
MsG0280007472.01.T01 MTR_8g083240 38.261 115 47 6 23 126 666 767 1.29e-12 63.5
MsG0280007472.01.T01 MTR_3g110840 37.383 107 59 5 24 126 755 857 1.65e-12 63.2
MsG0280007472.01.T01 MTR_4g069970 32.558 129 75 6 6 126 211 335 1.77e-12 63.2
MsG0280007472.01.T01 MTR_1g079430 34.959 123 63 7 12 126 155 268 1.93e-12 63.2
MsG0280007472.01.T01 MTR_8g106100 34.906 106 63 4 23 126 674 775 1.96e-12 63.2
MsG0280007472.01.T01 MTR_1g033040 37.963 108 58 6 23 126 677 779 2.31e-12 62.8
MsG0280007472.01.T01 MTR_8g089210 36.842 114 61 5 20 126 788 897 2.33e-12 62.8
MsG0280007472.01.T01 MTR_1g033000 36.792 106 61 4 23 126 675 776 2.62e-12 62.8
MsG0280007472.01.T01 MTR_5g086130 31.298 131 78 6 3 126 383 508 2.64e-12 62.8
MsG0280007472.01.T01 MTR_5g086130 31.298 131 78 6 3 126 385 510 2.64e-12 62.8
MsG0280007472.01.T01 MTR_4g069970 35.849 106 62 4 23 126 234 335 2.77e-12 62.4
MsG0280007472.01.T01 MTR_4g069970 35.849 106 62 4 23 126 234 335 2.80e-12 62.4
MsG0280007472.01.T01 MTR_2g022810 35.714 112 65 5 18 126 169 276 2.87e-12 62.4
MsG0280007472.01.T01 MTR_6g088610 36.036 111 65 4 18 126 382 488 3.00e-12 62.4
MsG0280007472.01.T01 MTR_8g067720 36.792 106 61 4 23 126 432 533 3.02e-12 62.4
MsG0280007472.01.T01 MTR_6g088755 35.849 106 61 5 24 126 781 882 3.39e-12 62.4
MsG0280007472.01.T01 MTR_3g092390 41.284 109 53 6 24 126 825 928 3.41e-12 62.4
MsG0280007472.01.T01 MTR_5g086030 34.586 133 71 8 3 126 403 528 3.41e-12 62.4
MsG0280007472.01.T01 MTR_7g109670 39.450 109 55 6 23 126 476 578 3.50e-12 62.4
MsG0280007472.01.T01 MTR_4g123870 40.566 106 56 5 24 126 198 299 3.80e-12 62.0
MsG0280007472.01.T01 MTR_2g090250 39.815 108 54 6 24 126 439 540 4.39e-12 62.0
MsG0280007472.01.T01 MTR_1g029610 39.815 108 53 6 24 126 387 487 4.50e-12 62.0
MsG0280007472.01.T01 MTR_8g089200 35.593 118 65 5 16 126 809 922 4.55e-12 62.0
MsG0280007472.01.T01 MTR_8g068050 36.364 110 54 6 24 126 339 439 4.68e-12 62.0
MsG0280007472.01.T01 MTR_8g088780 41.667 108 51 6 24 126 415 515 4.73e-12 62.0
MsG0280007472.01.T01 MTR_8g068050 36.364 110 54 6 24 126 449 549 4.78e-12 62.0
MsG0280007472.01.T01 MTR_8g042370 37.383 107 55 6 23 126 203 300 5.07e-12 61.6
MsG0280007472.01.T01 MTR_8g052420 36.697 109 56 7 24 126 560 661 5.24e-12 62.0
MsG0280007472.01.T01 MTR_4g123870 41.509 106 55 5 24 126 167 268 5.28e-12 61.6
MsG0280007472.01.T01 MTR_7g116660 38.596 114 58 8 19 126 163 270 5.35e-12 61.6
MsG0280007472.01.T01 MTR_2g024290 30.534 131 79 6 3 126 381 506 5.62e-12 61.6
MsG0280007472.01.T01 MTR_3g115490 36.607 112 61 6 19 126 179 284 5.70e-12 61.6
MsG0280007472.01.T01 MTR_2g024290 30.534 131 79 6 3 126 381 506 5.74e-12 61.6
MsG0280007472.01.T01 MTR_8g067630 36.792 106 61 4 23 126 381 482 5.77e-12 61.6
MsG0280007472.01.T01 MTR_8g052120 36.697 109 56 7 24 126 550 651 6.06e-12 61.6
MsG0280007472.01.T01 MTR_6g088770 35.849 106 61 5 24 126 701 802 6.48e-12 61.6
MsG0280007472.01.T01 MTR_2g010470 36.697 109 62 5 20 126 784 887 7.08e-12 61.6
MsG0280007472.01.T01 MTR_3g116590 33.333 129 74 6 6 126 205 329 7.65e-12 61.2
MsG0280007472.01.T01 MTR_3g116590 33.333 129 74 6 6 126 205 329 7.66e-12 61.2
MsG0280007472.01.T01 MTR_7g092880 36.975 119 54 7 22 126 712 823 7.97e-12 61.2
MsG0280007472.01.T01 MTR_3g040800 38.393 112 59 6 19 126 206 311 8.79e-12 61.2
MsG0280007472.01.T01 MTR_4g085810 33.333 120 69 6 12 126 408 521 9.31e-12 61.2
MsG0280007472.01.T01 MTR_2g096950 34.454 119 68 6 12 126 167 279 9.51e-12 60.8
MsG0280007472.01.T01 MTR_3g116450 35.714 112 64 5 18 126 375 481 9.75e-12 61.2
MsG0280007472.01.T01 MTR_7g099220 38.053 113 58 7 19 126 423 528 9.77e-12 61.2
MsG0280007472.01.T01 MTR_8g052190 36.697 109 56 7 24 126 571 672 1.03e-11 60.8
MsG0280007472.01.T01 MTR_8g052190 36.697 109 56 7 24 126 572 673 1.03e-11 60.8
MsG0280007472.01.T01 MTR_7g117520 39.252 107 55 6 23 126 512 611 1.08e-11 60.8
MsG0280007472.01.T01 MTR_8g014500 31.579 133 76 7 4 125 422 550 1.09e-11 60.8
MsG0280007472.01.T01 MTR_8g051600 35.780 109 57 7 24 126 568 669 1.10e-11 60.8
MsG0280007472.01.T01 MTR_7g093610 37.615 109 59 6 22 126 170 273 1.13e-11 60.8
MsG0280007472.01.T01 MTR_1g054340 38.318 107 57 6 24 126 180 281 1.20e-11 60.5
MsG0280007472.01.T01 MTR_5g014700 37.500 112 63 5 18 126 781 888 1.22e-11 60.8
MsG0280007472.01.T01 MTR_3g092420 41.284 109 53 6 24 126 780 883 1.25e-11 60.8
MsG0280007472.01.T01 MTR_8g014500 31.579 133 76 7 4 125 422 550 1.28e-11 60.8
MsG0280007472.01.T01 MTR_7g015230 35.897 117 65 6 15 126 619 730 1.29e-11 60.8
MsG0280007472.01.T01 MTR_3g064080 33.333 129 72 7 6 126 397 519 1.37e-11 60.5
MsG0280007472.01.T01 MTR_8g052570 35.780 109 57 7 24 126 157 258 1.39e-11 60.5
MsG0280007472.01.T01 MTR_8g052517 35.780 109 57 7 24 126 157 258 1.39e-11 60.5
MsG0280007472.01.T01 MTR_4g051605 39.450 109 54 6 23 126 712 813 1.52e-11 60.5
MsG0280007472.01.T01 MTR_2g008740 34.848 132 66 7 6 126 184 306 1.53e-11 60.5
MsG0280007472.01.T01 MTR_8g052060 35.780 109 57 7 24 126 536 637 1.56e-11 60.5
MsG0280007472.01.T01 MTR_7g078730 33.333 129 74 6 6 126 232 356 1.58e-11 60.5
MsG0280007472.01.T01 MTR_7g022160 34.821 112 63 6 20 126 821 927 1.70e-11 60.5
MsG0280007472.01.T01 MTR_2g014560 39.252 107 57 5 24 126 785 887 1.78e-11 60.5
MsG0280007472.01.T01 MTR_2g087230 37.037 108 58 6 23 126 702 803 1.95e-11 60.1
MsG0280007472.01.T01 MTR_4g052290 35.897 117 65 6 15 126 612 723 1.98e-11 60.1
MsG0280007472.01.T01 MTR_8g014500 31.579 133 76 7 4 125 422 550 1.98e-11 60.1
MsG0280007472.01.T01 MTR_5g005530 36.792 106 60 5 24 126 422 523 2.01e-11 60.1
MsG0280007472.01.T01 MTR_4g061833 32.576 132 74 7 4 126 418 543 2.05e-11 60.1
MsG0280007472.01.T01 MTR_4g061833 32.576 132 74 7 4 126 569 694 2.09e-11 60.1
MsG0280007472.01.T01 MTR_4g061930 32.576 132 74 7 4 126 569 694 2.09e-11 60.1
MsG0280007472.01.T01 MTR_8g052050 35.780 109 57 7 24 126 579 680 2.10e-11 60.1
MsG0280007472.01.T01 MTR_1g033010 34.426 122 68 5 7 126 660 771 2.13e-11 60.1
MsG0280007472.01.T01 MTR_7g015320 35.897 117 65 6 15 126 608 719 2.14e-11 60.1
MsG0280007472.01.T01 MTR_7g015250 35.897 117 65 6 15 126 603 714 2.16e-11 60.1
MsG0280007472.01.T01 MTR_3g019530 37.736 106 59 5 24 126 556 657 2.20e-11 60.1
MsG0280007472.01.T01 MTR_2g072520 33.898 118 70 5 13 126 106 219 2.20e-11 59.7
MsG0280007472.01.T01 MTR_3g019530 37.736 106 59 5 24 126 595 696 2.21e-11 60.1
MsG0280007472.01.T01 MTR_3g019530 37.736 106 59 5 24 126 601 702 2.21e-11 60.1
MsG0280007472.01.T01 MTR_5g068260 38.182 110 53 7 24 126 428 529 2.40e-11 60.1
MsG0280007472.01.T01 MTR_8g052200 35.780 109 57 7 24 126 557 658 2.47e-11 60.1
MsG0280007472.01.T01 MTR_8g063300 34.211 114 66 5 18 126 150 259 2.53e-11 59.7
MsG0280007472.01.T01 MTR_7g015240 35.897 117 65 6 15 126 606 717 2.82e-11 59.7
MsG0280007472.01.T01 MTR_2g011190 36.364 110 55 7 24 126 617 718 2.93e-11 59.7
MsG0280007472.01.T01 MTR_3g080050 34.074 135 70 9 3 126 385 511 3.68e-11 59.3
MsG0280007472.01.T01 MTR_3g449390 37.500 112 63 5 18 126 798 905 3.89e-11 59.3
MsG0280007472.01.T01 MTR_6g470960 36.364 110 60 5 18 126 468 568 3.94e-11 59.3
MsG0280007472.01.T01 MTR_6g068970 35.714 112 53 6 24 126 822 923 3.95e-11 59.3
MsG0280007472.01.T01 MTR_1g013040 43.269 104 46 7 24 122 252 347 4.03e-11 59.3
MsG0280007472.01.T01 MTR_4g014900 43.269 104 46 7 24 122 257 352 4.28e-11 59.3
MsG0280007472.01.T01 MTR_8g107470 35.455 110 61 5 18 126 465 565 4.38e-11 59.3
MsG0280007472.01.T01 MTR_4g114240 35.238 105 63 4 24 126 632 733 4.39e-11 59.3
MsG0280007472.01.T01 MTR_1g080440 35.922 103 59 5 26 126 809 906 4.47e-11 59.3
MsG0280007472.01.T01 MTR_1g013040 43.269 104 46 7 24 122 252 347 4.52e-11 58.9
MsG0280007472.01.T01 MTR_4g014900 43.269 104 46 7 24 122 257 352 4.71e-11 58.9
MsG0280007472.01.T01 MTR_4g109170 36.190 105 61 4 24 126 903 1003 4.81e-11 59.3
MsG0280007472.01.T01 MTR_1g099260 31.132 106 66 5 24 126 441 542 5.11e-11 58.9
MsG0280007472.01.T01 MTR_8g023560 37.168 113 49 6 23 126 476 575 5.18e-11 58.9
MsG0280007472.01.T01 MTR_8g023560 37.168 113 49 6 23 126 507 606 5.31e-11 58.9
MsG0280007472.01.T01 MTR_5g055470 34.545 110 59 6 17 126 431 527 6.11e-11 58.9
MsG0280007472.01.T01 MTR_7g022050 34.821 112 63 6 20 126 446 552 6.24e-11 58.9
MsG0280007472.01.T01 MTR_5g083910 31.298 131 78 5 4 126 597 723 8.28e-11 58.5
MsG0280007472.01.T01 MTR_5g083910 31.298 131 78 5 4 126 729 855 8.37e-11 58.5
MsG0280007472.01.T01 MTR_2g008370 33.945 109 66 4 20 126 381 485 8.40e-11 58.5
MsG0280007472.01.T01 MTR_2g103950 38.095 105 59 4 24 126 135 235 8.56e-11 58.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007472.01.T01 AT4G20940 75.676 111 26 1 16 126 844 953 4.85e-56 187
MsG0280007472.01.T01 AT5G10020 53.704 108 48 2 19 126 813 918 4.98e-34 124
MsG0280007472.01.T01 AT5G10020 53.704 108 48 2 19 126 861 966 5.00e-34 124
MsG0280007472.01.T01 AT2G27060 50.000 98 48 1 29 126 741 837 2.02e-26 103
MsG0280007472.01.T01 AT2G27060 50.000 98 48 1 29 126 834 930 2.04e-26 103
MsG0280007472.01.T01 AT1G15530 41.509 106 56 4 23 126 453 554 2.08e-17 77.4
MsG0280007472.01.T01 AT3G24660 42.056 107 56 4 22 126 467 569 2.27e-16 74.3
MsG0280007472.01.T01 AT2G26730 37.615 109 59 4 18 126 440 539 5.15e-16 73.2
MsG0280007472.01.T01 AT3G51740 41.748 103 56 3 24 126 632 730 6.93e-16 73.2
MsG0280007472.01.T01 AT3G55550 41.905 105 55 4 24 126 441 541 1.28e-14 69.3
MsG0280007472.01.T01 AT3G59350 40.000 115 57 7 16 126 224 330 1.87e-14 68.9
MsG0280007472.01.T01 AT5G48740 38.525 122 66 6 9 126 686 802 2.11e-14 68.9
MsG0280007472.01.T01 AT3G59350 40.000 115 57 7 16 126 209 315 2.55e-14 68.6
MsG0280007472.01.T01 AT3G59350 40.000 115 57 7 16 126 209 315 2.55e-14 68.6
MsG0280007472.01.T01 AT3G59350 40.000 115 57 7 16 126 209 315 2.63e-14 68.2
MsG0280007472.01.T01 AT3G59350 40.000 115 57 7 16 126 167 273 2.66e-14 68.2
MsG0280007472.01.T01 AT2G43230 39.130 115 58 7 16 126 241 347 4.35e-14 67.8
MsG0280007472.01.T01 AT2G43230 39.130 115 58 7 16 126 207 313 4.62e-14 67.8
MsG0280007472.01.T01 AT5G60320 36.364 110 63 4 19 126 436 540 1.48e-13 66.2
MsG0280007472.01.T01 AT5G01560 36.283 113 66 4 16 126 452 560 1.56e-13 66.2
MsG0280007472.01.T01 AT2G30740 40.000 115 57 7 16 126 167 273 1.58e-13 65.9
MsG0280007472.01.T01 AT2G30740 40.000 115 57 7 16 126 167 273 1.58e-13 65.9
MsG0280007472.01.T01 AT2G30740 40.000 115 57 7 16 126 167 273 1.58e-13 65.9
MsG0280007472.01.T01 AT2G30740 40.000 115 57 7 16 126 167 273 1.58e-13 65.9
MsG0280007472.01.T01 AT2G30740 40.000 115 57 7 16 126 167 273 1.58e-13 65.9
MsG0280007472.01.T01 AT2G30740 40.000 115 57 7 16 126 167 273 1.58e-13 65.9
MsG0280007472.01.T01 AT2G30740 40.000 115 57 7 16 126 167 273 1.58e-13 65.9
MsG0280007472.01.T01 AT2G30740 40.000 115 57 7 16 126 167 273 1.58e-13 65.9
MsG0280007472.01.T01 AT2G30740 40.000 115 57 7 16 126 167 273 1.58e-13 65.9
MsG0280007472.01.T01 AT2G30740 40.000 115 57 7 16 126 167 273 1.58e-13 65.9
MsG0280007472.01.T01 AT2G30740 40.000 115 57 7 16 126 167 273 1.58e-13 65.9
MsG0280007472.01.T01 AT2G30740 40.000 115 57 7 16 126 167 273 1.58e-13 65.9
MsG0280007472.01.T01 AT2G30740 40.000 115 57 7 16 126 167 273 1.58e-13 65.9
MsG0280007472.01.T01 AT2G30740 40.000 115 57 7 16 126 167 273 1.58e-13 65.9
MsG0280007472.01.T01 AT2G30740 40.000 115 57 7 16 126 167 273 1.58e-13 65.9
MsG0280007472.01.T01 AT1G10620 38.053 113 60 6 18 126 457 563 1.78e-13 66.2
MsG0280007472.01.T01 AT3G24550 36.937 111 64 4 18 126 367 473 2.35e-13 65.9
MsG0280007472.01.T01 AT5G43020 39.623 106 60 3 23 126 472 575 2.46e-13 65.9
MsG0280007472.01.T01 AT1G11050 41.284 109 52 6 23 126 394 495 2.79e-13 65.5
MsG0280007472.01.T01 AT2G45910 34.545 110 65 5 20 126 568 673 3.17e-13 65.5
MsG0280007472.01.T01 AT2G45910 34.545 110 65 5 20 126 568 673 3.17e-13 65.5
MsG0280007472.01.T01 AT1G06700 38.596 114 60 6 16 126 164 270 4.08e-13 64.7
MsG0280007472.01.T01 AT1G06700 38.596 114 60 6 16 126 164 270 4.08e-13 64.7
MsG0280007472.01.T01 AT1G06700 38.596 114 60 6 16 126 164 270 4.08e-13 64.7
MsG0280007472.01.T01 AT3G24540 38.053 113 60 6 18 126 270 376 5.28e-13 64.7
MsG0280007472.01.T01 AT1G14370 39.655 116 52 7 19 126 184 289 6.93e-13 64.3
MsG0280007472.01.T01 AT4G04510 40.741 108 53 7 24 126 433 534 7.67e-13 64.3
MsG0280007472.01.T01 AT4G04510 40.741 108 53 7 24 126 435 536 7.68e-13 64.3
MsG0280007472.01.T01 AT3G55450 37.963 108 57 6 23 126 166 267 8.10e-13 63.9
MsG0280007472.01.T01 AT3G55450 37.963 108 57 6 23 126 203 304 8.42e-13 63.9
MsG0280007472.01.T01 AT1G66150 42.056 107 54 6 23 126 685 786 8.94e-13 64.3
MsG0280007472.01.T01 AT5G25930 37.383 107 59 5 24 126 788 890 9.16e-13 63.9
MsG0280007472.01.T01 AT3G23750 37.391 115 48 6 23 126 675 776 1.01e-12 63.9
MsG0280007472.01.T01 AT5G59270 36.190 105 61 4 24 126 462 562 1.16e-12 63.9
MsG0280007472.01.T01 AT1G70130 37.273 110 53 6 24 126 428 528 1.21e-12 63.5
MsG0280007472.01.T01 AT5G16590 35.455 110 61 5 18 126 432 532 1.28e-12 63.5
MsG0280007472.01.T01 AT5G59270 36.190 105 61 4 24 126 443 543 1.33e-12 63.5
MsG0280007472.01.T01 AT5G59270 36.190 105 61 4 24 126 446 546 1.36e-12 63.5
MsG0280007472.01.T01 AT5G61570 39.806 103 56 4 26 126 185 283 1.43e-12 63.2
MsG0280007472.01.T01 AT5G61570 39.806 103 56 4 26 126 182 280 1.48e-12 63.2
MsG0280007472.01.T01 AT1G78530 38.095 105 59 4 24 126 166 266 1.56e-12 62.8
MsG0280007472.01.T01 AT4G23280 40.367 109 52 6 24 126 388 489 1.58e-12 63.5
MsG0280007472.01.T01 AT4G23280 40.367 109 52 6 24 126 436 537 1.59e-12 63.5
MsG0280007472.01.T01 AT4G23280 40.367 109 52 6 24 126 438 539 1.59e-12 63.5
MsG0280007472.01.T01 AT5G16500 33.582 134 69 8 6 126 146 272 1.60e-12 63.5
MsG0280007472.01.T01 AT5G60300 38.318 107 59 4 22 126 435 536 1.69e-12 63.2
MsG0280007472.01.T01 AT5G60300 38.318 107 59 4 22 126 435 536 1.69e-12 63.2
MsG0280007472.01.T01 AT1G78530 38.095 105 59 4 24 126 166 266 1.89e-12 62.8
MsG0280007472.01.T01 AT5G60300 38.318 107 59 4 22 126 435 536 1.94e-12 63.2
MsG0280007472.01.T01 AT2G30730 36.697 109 60 6 22 126 146 249 2.06e-12 62.8
MsG0280007472.01.T01 AT5G59260 37.143 105 60 4 24 126 449 549 2.13e-12 63.2
MsG0280007472.01.T01 AT5G60270 38.095 105 58 4 24 126 437 536 2.15e-12 63.2
MsG0280007472.01.T01 AT1G21250 36.111 108 63 4 21 126 500 603 2.30e-12 62.8
MsG0280007472.01.T01 AT4G28350 38.679 106 58 5 24 126 444 545 2.47e-12 62.8
MsG0280007472.01.T01 AT3G02810 33.884 121 69 6 12 126 148 263 2.53e-12 62.8
MsG0280007472.01.T01 AT2G30730 36.697 109 60 6 22 126 156 259 2.63e-12 62.4
MsG0280007472.01.T01 AT1G28440 37.383 107 59 5 24 126 784 886 3.69e-12 62.4
MsG0280007472.01.T01 AT1G69790 35.652 115 56 7 19 126 182 285 3.88e-12 62.0
MsG0280007472.01.T01 AT4G05200 39.450 109 53 7 24 126 441 542 4.12e-12 62.0
MsG0280007472.01.T01 AT4G05200 39.450 109 53 7 24 126 459 560 4.13e-12 62.0
MsG0280007472.01.T01 AT4G04500 41.284 109 51 7 24 126 439 540 4.83e-12 62.0
MsG0280007472.01.T01 AT4G04490 40.367 109 52 7 24 126 434 535 4.89e-12 62.0
MsG0280007472.01.T01 AT2G15300 39.252 107 53 6 23 126 571 668 5.01e-12 62.0
MsG0280007472.01.T01 AT5G65710 37.838 111 58 6 23 126 785 891 5.18e-12 62.0
MsG0280007472.01.T01 AT3G53810 38.739 111 60 5 20 126 435 541 5.46e-12 62.0
MsG0280007472.01.T01 AT1G69790 35.652 115 56 7 19 126 171 274 5.87e-12 61.6
MsG0280007472.01.T01 AT5G24010 30.882 136 71 7 4 126 558 683 6.32e-12 61.6
MsG0280007472.01.T01 AT4G02420 37.838 111 61 5 20 126 438 544 6.37e-12 61.6
MsG0280007472.01.T01 AT1G24650 38.679 106 59 4 23 126 644 745 6.48e-12 61.6
MsG0280007472.01.T01 AT5G07280 38.095 105 59 4 24 126 1012 1112 6.95e-12 61.6
MsG0280007472.01.T01 AT1G79620 36.842 114 61 6 18 126 725 832 7.13e-12 61.6
MsG0280007472.01.T01 AT1G79620 36.842 114 61 6 18 126 751 858 7.14e-12 61.6
MsG0280007472.01.T01 AT4G34220 40.385 104 57 4 23 126 576 674 7.32e-12 61.6
MsG0280007472.01.T01 AT3G59700 36.697 109 63 4 20 126 429 533 8.10e-12 61.2
MsG0280007472.01.T01 AT4G23230 39.623 106 57 5 24 126 431 532 8.29e-12 61.2
MsG0280007472.01.T01 AT3G45430 37.383 107 60 4 22 126 435 536 8.52e-12 61.2
MsG0280007472.01.T01 AT3G45430 37.383 107 60 4 22 126 435 536 8.52e-12 61.2
MsG0280007472.01.T01 AT3G45430 37.383 107 60 4 22 126 435 536 8.52e-12 61.2
MsG0280007472.01.T01 AT4G28490 37.963 108 58 6 24 126 788 891 9.93e-12 61.2
MsG0280007472.01.T01 AT5G38560 35.075 134 65 9 6 126 410 534 9.96e-12 61.2
MsG0280007472.01.T01 AT3G21630 32.824 131 74 7 3 126 385 508 1.00e-11 61.2
MsG0280007472.01.T01 AT1G78980 38.889 108 50 6 23 126 500 595 1.06e-11 60.8
MsG0280007472.01.T01 AT2G25220 40.741 108 56 6 17 122 185 286 1.06e-11 60.8
MsG0280007472.01.T01 AT2G25220 40.741 108 56 6 17 122 234 335 1.10e-11 60.8
MsG0280007472.01.T01 AT2G25220 40.741 108 56 6 17 122 234 335 1.11e-11 60.8
MsG0280007472.01.T01 AT2G25220 40.741 108 56 6 17 122 239 340 1.11e-11 60.8
MsG0280007472.01.T01 AT3G47570 34.109 129 58 7 12 126 799 914 1.12e-11 60.8
MsG0280007472.01.T01 AT4G23180 38.532 109 54 6 24 126 442 543 1.12e-11 60.8
MsG0280007472.01.T01 AT4G23180 38.532 109 54 6 24 126 442 543 1.14e-11 60.8
MsG0280007472.01.T01 AT5G67200 38.095 105 59 5 23 126 490 589 1.17e-11 60.8
MsG0280007472.01.T01 AT1G21240 35.185 108 64 4 21 126 245 348 1.20e-11 60.8
MsG0280007472.01.T01 AT2G43690 36.190 105 61 4 24 126 430 530 1.21e-11 60.8
MsG0280007472.01.T01 AT2G43690 36.190 105 61 4 24 126 430 530 1.21e-11 60.8
MsG0280007472.01.T01 AT1G24030 33.621 116 64 6 18 126 98 207 1.26e-11 60.5
MsG0280007472.01.T01 AT1G21240 35.185 108 64 4 21 126 506 609 1.27e-11 60.8
MsG0280007472.01.T01 AT2G43690 36.190 105 61 4 24 126 394 494 1.34e-11 60.8
MsG0280007472.01.T01 AT5G47850 35.938 128 61 8 9 126 535 651 1.39e-11 60.8
MsG0280007472.01.T01 AT1G24030 33.621 116 64 6 18 126 152 261 1.40e-11 60.1
MsG0280007472.01.T01 AT1G24030 33.621 116 64 6 18 126 61 170 1.40e-11 60.1
MsG0280007472.01.T01 AT4G34500 33.333 129 74 6 6 126 218 342 1.41e-11 60.5
MsG0280007472.01.T01 AT4G32710 37.963 108 58 5 24 126 482 585 1.63e-11 60.5
MsG0280007472.01.T01 AT2G43700 37.615 109 62 4 20 126 425 529 1.69e-11 60.5
MsG0280007472.01.T01 AT4G23150 33.083 133 69 8 6 126 407 531 1.74e-11 60.5
MsG0280007472.01.T01 AT1G24030 33.621 116 64 6 18 126 152 261 1.80e-11 60.1
MsG0280007472.01.T01 AT1G24030 33.621 116 64 6 18 126 166 275 1.87e-11 60.1
MsG0280007472.01.T01 AT2G43700 37.615 109 62 4 20 126 401 505 1.98e-11 60.1
MsG0280007472.01.T01 AT2G43700 37.615 109 62 4 20 126 401 505 1.98e-11 60.1
MsG0280007472.01.T01 AT2G43700 37.615 109 62 4 20 126 401 505 1.98e-11 60.1
MsG0280007472.01.T01 AT2G43700 37.615 109 62 4 20 126 401 505 1.98e-11 60.1
MsG0280007472.01.T01 AT3G45410 33.333 108 65 4 21 126 432 534 2.01e-11 60.1
MsG0280007472.01.T01 AT4G04540 39.623 106 57 5 24 126 447 548 2.04e-11 60.1
MsG0280007472.01.T01 AT4G04540 39.623 106 57 5 24 126 418 519 2.06e-11 60.1
MsG0280007472.01.T01 AT4G04540 39.623 106 57 5 24 126 447 548 2.07e-11 60.1
MsG0280007472.01.T01 AT2G02220 33.333 129 74 6 6 126 805 929 2.09e-11 60.1
MsG0280007472.01.T01 AT2G25220 38.938 113 61 6 12 122 229 335 2.11e-11 60.1
MsG0280007472.01.T01 AT4G04570 39.623 106 57 5 24 126 278 379 2.12e-11 60.1
MsG0280007472.01.T01 AT1G68400 38.053 113 55 7 17 126 454 554 2.16e-11 60.1
MsG0280007472.01.T01 AT4G04570 39.623 106 57 5 24 126 442 543 2.26e-11 60.1
MsG0280007472.01.T01 AT4G29990 30.769 130 79 6 4 126 642 767 2.28e-11 60.1
MsG0280007472.01.T01 AT4G04570 39.623 106 57 5 24 126 442 543 2.30e-11 60.1
MsG0280007472.01.T01 AT4G23310 38.532 109 54 6 24 126 562 663 2.30e-11 60.1
MsG0280007472.01.T01 AT4G23310 38.532 109 54 6 24 126 602 703 2.31e-11 60.1
MsG0280007472.01.T01 AT2G02800 36.207 116 56 7 19 126 181 286 2.32e-11 60.1
MsG0280007472.01.T01 AT2G02800 36.207 116 56 7 19 126 181 286 2.32e-11 60.1
MsG0280007472.01.T01 AT3G49670 36.607 112 64 5 18 126 779 886 2.37e-11 60.1
MsG0280007472.01.T01 AT2G18470 35.714 112 64 5 18 126 371 477 2.38e-11 60.1
MsG0280007472.01.T01 AT2G18470 35.714 112 64 5 18 126 371 477 2.38e-11 60.1
MsG0280007472.01.T01 AT2G18470 35.714 112 64 5 18 126 371 477 2.38e-11 60.1
MsG0280007472.01.T01 AT4G02010 40.909 110 52 6 23 126 476 578 2.40e-11 60.1
MsG0280007472.01.T01 AT4G11530 36.697 109 56 6 24 126 446 547 2.45e-11 60.1
MsG0280007472.01.T01 AT5G65700 36.607 112 64 5 18 126 783 890 2.56e-11 60.1
MsG0280007472.01.T01 AT5G65700 36.607 112 64 5 18 126 783 890 2.56e-11 60.1
MsG0280007472.01.T01 AT2G25220 40.741 108 56 6 17 122 185 286 2.78e-11 59.7
MsG0280007472.01.T01 AT2G18470 35.714 112 64 5 18 126 371 477 2.91e-11 59.7
MsG0280007472.01.T01 AT5G42120 32.407 108 64 5 24 126 469 572 3.19e-11 59.7
MsG0280007472.01.T01 AT4G32000 41.176 102 51 6 24 122 224 319 3.35e-11 59.3
MsG0280007472.01.T01 AT3G14840 31.008 129 77 5 6 126 743 867 3.53e-11 59.7
MsG0280007472.01.T01 AT1G75820 38.679 106 58 5 24 126 786 887 3.77e-11 59.3
MsG0280007472.01.T01 AT4G32000 41.176 102 51 6 24 122 266 361 3.87e-11 59.3
MsG0280007472.01.T01 AT4G32000 41.176 102 51 6 24 122 223 318 3.94e-11 59.3
MsG0280007472.01.T01 AT4G23130 37.719 114 58 6 19 126 433 539 3.97e-11 59.3
MsG0280007472.01.T01 AT5G01890 36.449 107 58 6 24 126 781 881 3.99e-11 59.3
MsG0280007472.01.T01 AT4G23130 37.719 114 58 6 19 126 429 535 4.04e-11 59.3
MsG0280007472.01.T01 AT4G23130 37.719 114 58 6 19 126 433 539 4.04e-11 59.3
MsG0280007472.01.T01 AT2G21480 35.537 121 64 7 10 125 606 717 4.16e-11 59.3
MsG0280007472.01.T01 AT1G26150 37.963 108 59 5 22 126 521 623 4.39e-11 59.3
MsG0280007472.01.T01 AT5G44700 34.259 108 62 5 24 126 1048 1151 5.49e-11 58.9
MsG0280007472.01.T01 AT1G16110 33.945 109 66 4 20 126 524 628 6.05e-11 58.9
MsG0280007472.01.T01 AT1G60800 35.455 110 65 4 19 126 325 430 6.56e-11 58.5
MsG0280007472.01.T01 AT1G26150 37.963 108 59 5 22 126 521 623 6.61e-11 58.9
MsG0280007472.01.T01 AT1G60800 35.455 110 65 4 19 126 392 497 6.65e-11 58.5
MsG0280007472.01.T01 AT4G39110 35.537 121 64 7 10 125 607 718 7.43e-11 58.5
MsG0280007472.01.T01 AT4G23190 37.615 109 55 6 24 126 444 545 7.47e-11 58.5
MsG0280007472.01.T01 AT4G23190 37.615 109 55 6 24 126 366 467 7.48e-11 58.5
MsG0280007472.01.T01 AT4G23190 37.615 109 55 6 24 126 366 467 7.48e-11 58.5
MsG0280007472.01.T01 AT4G23190 37.615 109 55 6 24 126 444 545 7.59e-11 58.5
MsG0280007472.01.T01 AT5G38250 40.426 94 50 4 37 126 412 503 7.75e-11 58.5
MsG0280007472.01.T01 AT5G38240 40.426 94 50 4 37 126 369 460 8.22e-11 58.5
MsG0280007472.01.T01 AT5G38240 40.426 94 50 4 37 126 415 506 8.30e-11 58.5
MsG0280007472.01.T01 AT5G38240 40.426 94 50 4 37 126 433 524 8.33e-11 58.5
MsG0280007472.01.T01 AT1G08590 37.864 103 57 5 26 126 825 922 9.68e-11 58.2

Find 26 sgRNAs with CRISPR-Local

Find 28 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACAACACATTTATAGCTTTA+AGG 0.096850 2:+15923149 None:intergenic
AACTCAGATGTTTATGCTTT+TGG 0.191403 2:-15922974 MsG0280007472.01.T01:CDS
GGGGAACAACTCGGTCAAAA+TGG 0.327539 2:+15923179 None:intergenic
ATTGAAAAGATTCTAGATAC+TGG 0.355999 2:-15923055 MsG0280007472.01.T01:CDS
CTTCTTTGAAGCAGCTAACT+TGG 0.356377 2:+15923012 None:intergenic
ATTCTAGATACTGGTGCCTT+AGG 0.395099 2:-15923046 MsG0280007472.01.T01:CDS
AGTGGAGGATCGTTTCTTCC+TGG 0.407921 2:+15923262 None:intergenic
AGCATAAACATCTGAGTTGA+AGG 0.421925 2:+15922979 None:intergenic
TTCTTTGAAGCAGCTAACTT+GGG 0.433499 2:+15923013 None:intergenic
GGTCAAAATGGAGATAGTTC+AGG 0.486146 2:+15923191 None:intergenic
TTATAGCTTTAAGGTTTCCA+TGG 0.490387 2:+15923158 None:intergenic
TATAGCTTTAAGGTTTCCAT+GGG 0.507066 2:+15923159 None:intergenic
TACCAGCTTGAGTCATAAGT+TGG 0.523324 2:+15923080 None:intergenic
CTCTGTGCCCATGTCAGTGG+AGG 0.527174 2:+15923247 None:intergenic
GAAACGATCCTCCACTGACA+TGG 0.545871 2:-15923255 MsG0280007472.01.T01:CDS
CACCAACTTATGACTCAAGC+TGG 0.557119 2:-15923082 MsG0280007472.01.T01:CDS
TTTGACCGAGTTGTTCCCCA+TGG 0.559139 2:-15923175 MsG0280007472.01.T01:CDS
AGCCTCTGTGCCCATGTCAG+TGG 0.559911 2:+15923244 None:intergenic
TCTGAGTTGAAGGAAGGCAT+TGG 0.567808 2:+15922989 None:intergenic
GGTTTCCATGGGGAACAACT+CGG 0.571507 2:+15923170 None:intergenic
CTTGGGTGCATGATAACCTA+AGG 0.579265 2:+15923030 None:intergenic
AAACGATCCTCCACTGACAT+GGG 0.599393 2:-15923254 MsG0280007472.01.T01:CDS
TAAACATCTGAGTTGAAGGA+AGG 0.617654 2:+15922983 None:intergenic
CTCCACTGACATGGGCACAG+AGG 0.672622 2:-15923246 MsG0280007472.01.T01:CDS
GCAGTTGACGTAGTAGCACG+TGG 0.744027 2:-15923214 MsG0280007472.01.T01:CDS
ATAGCTTTAAGGTTTCCATG+GGG 0.763929 2:+15923160 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAATAACAAACATATATAA+TGG + Chr2:15923015-15923034 None:intergenic 10.0%
! ATTGAAAAGATTCTAGATAC+TGG - Chr2:15923291-15923310 MsG0280007472.01.T01:intron 25.0%
!! ACAACACATTTATAGCTTTA+AGG + Chr2:15923200-15923219 None:intergenic 25.0%
! AACTCAGATGTTTATGCTTT+TGG - Chr2:15923372-15923391 MsG0280007472.01.T01:intron 30.0%
!! TATAGCTTTAAGGTTTCCAT+GGG + Chr2:15923190-15923209 None:intergenic 30.0%
!! TTATAGCTTTAAGGTTTCCA+TGG + Chr2:15923191-15923210 None:intergenic 30.0%
! AGCATAAACATCTGAGTTGA+AGG + Chr2:15923370-15923389 None:intergenic 35.0%
! TAAACATCTGAGTTGAAGGA+AGG + Chr2:15923366-15923385 None:intergenic 35.0%
!! ATAGCTTTAAGGTTTCCATG+GGG + Chr2:15923189-15923208 None:intergenic 35.0%
!! TTCTTTGAAGCAGCTAACTT+GGG + Chr2:15923336-15923355 None:intergenic 35.0%
!! TTTTAATTCTCAGATCGACC+AGG - Chr2:15923066-15923085 MsG0280007472.01.T01:CDS 35.0%
ATTCTAGATACTGGTGCCTT+AGG - Chr2:15923300-15923319 MsG0280007472.01.T01:intron 40.0%
GGTCAAAATGGAGATAGTTC+AGG + Chr2:15923158-15923177 None:intergenic 40.0%
TACCAGCTTGAGTCATAAGT+TGG + Chr2:15923269-15923288 None:intergenic 40.0%
!! CTTCTTTGAAGCAGCTAACT+TGG + Chr2:15923337-15923356 None:intergenic 40.0%
AAACGATCCTCCACTGACAT+GGG - Chr2:15923092-15923111 MsG0280007472.01.T01:CDS 45.0%
CACCAACTTATGACTCAAGC+TGG - Chr2:15923264-15923283 MsG0280007472.01.T01:CDS 45.0%
CTTGGGTGCATGATAACCTA+AGG + Chr2:15923319-15923338 None:intergenic 45.0%
! TCTGAGTTGAAGGAAGGCAT+TGG + Chr2:15923360-15923379 None:intergenic 45.0%
AGTGGAGGATCGTTTCTTCC+TGG + Chr2:15923087-15923106 None:intergenic 50.0%
GAAACGATCCTCCACTGACA+TGG - Chr2:15923091-15923110 MsG0280007472.01.T01:CDS 50.0%
GGGGAACAACTCGGTCAAAA+TGG + Chr2:15923170-15923189 None:intergenic 50.0%
GGTTTCCATGGGGAACAACT+CGG + Chr2:15923179-15923198 None:intergenic 50.0%
TTTGACCGAGTTGTTCCCCA+TGG - Chr2:15923171-15923190 MsG0280007472.01.T01:CDS 50.0%
GCAGTTGACGTAGTAGCACG+TGG - Chr2:15923132-15923151 MsG0280007472.01.T01:CDS 55.0%
AGCCTCTGTGCCCATGTCAG+TGG + Chr2:15923105-15923124 None:intergenic 60.0%
CTCCACTGACATGGGCACAG+AGG - Chr2:15923100-15923119 MsG0280007472.01.T01:CDS 60.0%
CTCTGTGCCCATGTCAGTGG+AGG + Chr2:15923102-15923121 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
Chr2 gene 15922952 15923416 15922952 ID=MsG0280007472.01;Name=MsG0280007472.01
Chr2 mRNA 15922952 15923416 15922952 ID=MsG0280007472.01.T01;Parent=MsG0280007472.01;Name=MsG0280007472.01.T01;_AED=0.50;_eAED=0.53;_QI=0|0|0|0.5|1|1|2|0|126
Chr2 exon 15923374 15923416 15923374 ID=MsG0280007472.01.T01:exon:4205;Parent=MsG0280007472.01.T01
Chr2 exon 15922952 15923289 15922952 ID=MsG0280007472.01.T01:exon:4204;Parent=MsG0280007472.01.T01
Chr2 CDS 15923374 15923416 15923374 ID=MsG0280007472.01.T01:cds;Parent=MsG0280007472.01.T01
Chr2 CDS 15922952 15923289 15922952 ID=MsG0280007472.01.T01:cds;Parent=MsG0280007472.01.T01
Gene Sequence

>MsG0280007472.01.T01

ATGGTTGCAATGCACATCATTTTTGCTTATGCTGATAATACATATCGACCAGGAAGAAACGATCCTCCACTGACATGGGCACAGAGGCTCAAAGTAGCAGTTGACGTAGTAGCACGTGGCCTGAACTATCTCCATTTTGACCGAGTTGTTCCCCATGGAAACCTTAAAGCTATAAATGTGTTGTTAGATATCGCTGATATGAATGCACGCGTTGCTGATTATTGTCATCACCAACTTATGACTCAAGCTGGTATTATTGAAAAGATTCTAGATACTGGTGCCTTAGGTTATCATGCACCCAAGTTAGCTGCTTCAAAGAAGCCAATGCCTTCCTTCAACTCAGATGTTTATGCTTTTGGCGTGATATTTTTGAAACTTTGA
Protein sequence

>MsG0280007472.01.T01

MVAMHIIFAYADNTYRPGRNDPPLTWAQRLKVAVDVVARGLNYLHFDRVVPHGNLKAINVLLDIADMNARVADYCHHQLMTQAGIIEKILDTGALGYHAPKLAASKKPMPSFNSDVYAFGVIFLKL*