AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280007725.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007725.01.T01 MTR_2g030570 60.106 376 85 7 1 319 1 368 6.92e-136 406
MsG0280007725.01.T01 MTR_2g030570 84.722 72 11 0 359 430 628 699 5.64e-31 126
MsG0280007725.01.T01 MTR_2g030570 86.792 53 7 0 298 350 493 545 4.94e-23 102
MsG0280007725.01.T01 MTR_2g030600 58.594 384 76 10 1 319 1 366 1.39e-128 387
MsG0280007725.01.T01 MTR_2g030600 92.157 51 4 0 300 350 493 543 3.10e-23 102
MsG0280007725.01.T01 MTR_2g030600 66.667 72 19 1 359 430 626 692 9.16e-21 95.5
MsG0280007725.01.T01 MTR_2g451350 90.226 133 13 0 165 297 1 133 1.72e-84 255
MsG0280007725.01.T01 MTR_2g030660 36.909 317 168 9 11 300 4 315 2.21e-44 164
MsG0280007725.01.T01 MTR_7g427710 34.643 280 155 7 49 306 42 315 1.89e-35 139
MsG0280007725.01.T01 MTR_2g451350 91.803 61 5 0 237 297 34 94 5.88e-34 122
MsG0280007725.01.T01 MTR_6g477820 42.208 154 87 2 151 303 221 373 1.58e-31 127
MsG0280007725.01.T01 MTR_7g427690 42.236 161 85 3 153 306 57 216 1.12e-28 117
MsG0280007725.01.T01 MTR_7g427700 28.979 421 225 17 49 426 42 431 1.59e-27 114
MsG0280007725.01.T01 MTR_5g005600 31.169 308 151 8 49 300 71 373 3.94e-27 114
MsG0280007725.01.T01 MTR_2g101720 25.153 326 184 6 49 323 165 481 1.72e-25 109
MsG0280007725.01.T01 MTR_8g432540 37.324 142 86 2 163 303 324 463 2.17e-23 103
MsG0280007725.01.T01 MTR_7g076080 34.752 141 92 0 163 303 295 435 9.16e-23 101
MsG0280007725.01.T01 MTR_5g029320 35.099 151 84 5 151 295 282 424 5.76e-22 99.4
MsG0280007725.01.T01 MTR_2g088470 33.750 160 103 2 151 309 250 407 5.32e-21 96.3
MsG0280007725.01.T01 MTR_1g101280 30.573 157 107 2 163 318 268 423 3.00e-19 90.9
MsG0280007725.01.T01 MTR_4g047800 31.148 183 111 5 151 323 240 417 3.53e-19 90.5
MsG0280007725.01.T01 MTR_0198s0030 33.129 163 100 4 140 300 249 404 1.69e-18 88.6
MsG0280007725.01.T01 MTR_7g027605 50.000 66 33 0 241 306 2 67 1.21e-12 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007725.01.T01 AT1G73360 42.000 150 84 2 151 299 228 375 9.03e-31 125
MsG0280007725.01.T01 AT3G03260 39.429 175 99 4 157 325 211 384 4.64e-27 114
MsG0280007725.01.T01 AT1G17920 38.065 155 92 2 151 303 207 359 6.88e-27 114
MsG0280007725.01.T01 AT1G17920 38.065 155 92 2 151 303 207 359 6.88e-27 114
MsG0280007725.01.T01 AT3G03260 39.429 175 99 4 157 325 211 384 9.51e-27 113
MsG0280007725.01.T01 AT1G79840 30.070 286 147 11 49 296 127 397 6.58e-25 108
MsG0280007725.01.T01 AT1G79840 30.070 286 147 11 49 296 69 339 8.85e-25 107
MsG0280007725.01.T01 AT1G79840 30.070 286 147 11 49 296 69 339 8.85e-25 107
MsG0280007725.01.T01 AT1G79840 30.070 286 147 11 49 296 127 397 9.63e-25 107
MsG0280007725.01.T01 AT1G79840 30.070 286 147 11 49 296 156 426 1.04e-24 107
MsG0280007725.01.T01 AT1G79840 30.070 286 147 11 49 296 127 397 1.05e-24 107
MsG0280007725.01.T01 AT4G17710 28.155 309 180 9 49 325 114 412 1.73e-24 106
MsG0280007725.01.T01 AT4G00730 37.748 151 90 2 153 303 318 464 5.60e-24 104
MsG0280007725.01.T01 AT5G52170 28.720 289 146 9 49 303 83 345 6.58e-24 105
MsG0280007725.01.T01 AT5G52170 28.720 289 146 9 49 303 83 345 6.58e-24 105
MsG0280007725.01.T01 AT5G52170 28.720 289 146 9 49 303 83 345 6.63e-24 105
MsG0280007725.01.T01 AT4G00730 37.748 151 90 2 153 303 318 464 9.05e-24 104
MsG0280007725.01.T01 AT3G61150 34.731 167 100 5 163 323 323 486 1.68e-22 100
MsG0280007725.01.T01 AT4G21750 34.641 153 98 1 151 303 254 404 1.82e-21 97.8
MsG0280007725.01.T01 AT4G21750 34.641 153 98 1 151 303 254 404 1.82e-21 97.8
MsG0280007725.01.T01 AT4G21750 34.641 153 98 1 151 303 254 404 1.82e-21 97.8
MsG0280007725.01.T01 AT4G21750 34.641 153 98 1 151 303 254 404 1.82e-21 97.8
MsG0280007725.01.T01 AT1G34650 33.838 198 114 7 141 325 209 402 1.33e-20 95.1
MsG0280007725.01.T01 AT4G04890 28.340 247 148 6 71 307 173 400 4.11e-20 93.6
MsG0280007725.01.T01 AT4G04890 28.340 247 148 6 71 307 173 400 4.11e-20 93.6
MsG0280007725.01.T01 AT1G05230 34.177 158 90 3 163 319 255 399 5.37e-20 93.2
MsG0280007725.01.T01 AT1G05230 34.177 158 90 3 163 319 255 399 5.94e-20 93.2
MsG0280007725.01.T01 AT1G05230 34.177 158 90 3 163 319 255 399 5.94e-20 93.2
MsG0280007725.01.T01 AT1G05230 34.177 158 90 3 163 319 255 399 5.94e-20 93.2
MsG0280007725.01.T01 AT1G05230 34.177 158 90 3 163 319 255 399 5.94e-20 93.2
MsG0280007725.01.T01 AT1G05230 34.177 158 90 3 163 319 255 399 5.94e-20 93.2
MsG0280007725.01.T01 AT1G05230 34.177 158 90 3 163 319 255 399 5.94e-20 93.2
MsG0280007725.01.T01 AT1G05230 34.177 158 90 3 163 319 255 399 5.94e-20 93.2
MsG0280007725.01.T01 AT1G05230 34.177 158 90 3 163 319 255 399 5.94e-20 93.2
MsG0280007725.01.T01 AT1G05230 34.177 158 90 3 163 319 255 399 5.94e-20 93.2
MsG0280007725.01.T01 AT1G05230 34.177 158 90 3 163 319 255 399 5.94e-20 93.2
MsG0280007725.01.T01 AT1G05230 34.177 158 90 3 163 319 255 399 7.06e-20 92.4
MsG0280007725.01.T01 AT4G25530 27.458 295 164 7 50 300 67 355 1.82e-19 91.7
MsG0280007725.01.T01 AT5G17320 34.054 185 100 6 153 325 235 409 2.11e-18 88.2
MsG0280007725.01.T01 AT5G46880 33.108 148 91 4 151 292 315 460 4.07e-16 81.3
MsG0280007725.01.T01 AT5G46880 33.108 148 91 4 151 292 315 460 4.07e-16 81.3
MsG0280007725.01.T01 AT5G46880 33.108 148 91 4 151 292 315 460 4.07e-16 81.3
MsG0280007725.01.T01 AT2G32370 30.137 146 91 3 163 303 256 395 1.05e-13 73.6

Find 92 sgRNAs with CRISPR-Local

Find 309 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCACCAATCCTGAATATT+TGG 0.136860 2:-19684025 None:intergenic
CCAAAGAACAATCACTTTAA+AGG 0.153190 2:+19683979 MsG0280007725.01.T01:CDS
ATGGACTAGTGCTCAGAATT+TGG 0.187958 2:-19686584 None:intergenic
ATCGCTTTGTAGGATCTTTA+AGG 0.190512 2:-19685760 None:intergenic
GTGTACCCATCTTGAGTATT+TGG 0.232783 2:-19683925 None:intergenic
ACTATCAAAGTGTTTGAAAT+AGG 0.250867 2:+19684364 MsG0280007725.01.T01:CDS
AAACCAAAACTTGATTTGTT+TGG 0.252374 2:-19682719 None:intergenic
TTTGGAGATTTGACCCAAAA+AGG 0.264891 2:-19683907 None:intergenic
CCTTTAAAGTGATTGTTCTT+TGG 0.271566 2:-19683979 None:intergenic
AACCAAAACTTGATTTGTTT+GGG 0.288547 2:-19682718 None:intergenic
GAAGAATCTTCCAAATATTC+AGG 0.291428 2:+19684015 MsG0280007725.01.T01:CDS
GTTACCTGTGATCGCTTTGT+AGG 0.304101 2:-19685770 None:intergenic
AGCCCAAACAAATCAAGTTT+TGG 0.306856 2:+19682716 MsG0280007725.01.T01:CDS
AAAGCTCCATCTCGACTTCC+TGG 0.342734 2:-19684391 None:intergenic
TCAGCTTTGGTAACAATTGT+AGG 0.366355 2:-19684340 None:intergenic
TTACTGCTGCTACCACCATT+TGG 0.373536 2:+19685705 MsG0280007725.01.T01:CDS
CCAAATCTTAATGCACCATT+TGG 0.373891 2:+19686516 MsG0280007725.01.T01:CDS
TCGAGATGGAGCTTTATTAC+TGG 0.373995 2:+19684399 MsG0280007725.01.T01:CDS
TGGACTAGTGCTCAGAATTT+GGG 0.378235 2:-19686583 None:intergenic
CACTTTGATAGTTTCAGCTT+TGG 0.378308 2:-19684353 None:intergenic
ATTAGTAACTTTCGAGATGA+TGG 0.395166 2:+19681267 MsG0280007725.01.T01:CDS
CCAAATGGTGCATTAAGATT+TGG 0.397130 2:-19686516 None:intergenic
GTCAATTGGCTGTGAAAGTT+GGG 0.402996 2:+19682689 MsG0280007725.01.T01:CDS
GAGTGCTCAAATCATGTTCA+TGG 0.409107 2:+19683754 MsG0280007725.01.T01:CDS
TTAGAATAGTAGCTGCCAAT+TGG 0.411318 2:-19686656 None:intergenic
CACTCATAAACCGTTCGGTT+TGG 0.412582 2:-19683736 None:intergenic
AGCACTTGGTCAACTGCATA+TGG 0.416823 2:-19686603 None:intergenic
CGTCAATTGGCTGTGAAAGT+TGG 0.419536 2:+19682688 MsG0280007725.01.T01:CDS
AGCGGAGGTAAGACGTTTGT+AGG 0.421913 2:-19681300 None:intergenic
CGAGGCAGAACGACGTCAAT+TGG 0.430389 2:+19682675 MsG0280007725.01.T01:CDS
AAATCTCCAAATACTCAAGA+TGG 0.432047 2:+19683919 MsG0280007725.01.T01:CDS
ATGGGAGGTGGCGGTGAGTC+CGG 0.432550 2:+19681234 MsG0280007725.01.T01:CDS
GAAGATTAGTGGCATAGATT+TGG 0.434141 2:+19684044 MsG0280007725.01.T01:CDS
TCAGGATTGGTGAAGATTAG+TGG 0.444549 2:+19684033 MsG0280007725.01.T01:CDS
TAGAATAGTAGCTGCCAATT+GGG 0.446699 2:-19686655 None:intergenic
TACTGCAGAAAAGTTGATGC+TGG 0.449130 2:+19684581 MsG0280007725.01.T01:CDS
AGATGCTGCAATGGATGAAT+TGG 0.453548 2:+19683861 MsG0280007725.01.T01:CDS
TACTTATATCAACACCCAAT+TGG 0.455805 2:+19686641 MsG0280007725.01.T01:CDS
GCAGTAACAACAGTGCCATT+TGG 0.456929 2:-19685689 None:intergenic
TTGAGAAATGGATTACTCAA+TGG 0.460842 2:+19681215 None:intergenic
CATCTTCCACATTAAGCACT+TGG 0.467910 2:-19686617 None:intergenic
TCATAAACCGTTCGGTTTGG+TGG 0.470954 2:-19683733 None:intergenic
GAACAAGAGAACTCTGTTGA+AGG 0.473464 2:+19682744 MsG0280007725.01.T01:CDS
TAACAACAGTGCCATTTGGC+TGG 0.481596 2:-19685685 None:intergenic
TTAAGAGCTTGCTCAAACTC+CGG 0.486029 2:-19683670 None:intergenic
TTGAGCACTCATAAACCGTT+CGG 0.491484 2:-19683741 None:intergenic
TGAGAAATGGATTACTCAAT+GGG 0.495986 2:+19681216 None:intergenic
GTGTTTGAAATAGGTTCGCC+AGG 0.496409 2:+19684373 MsG0280007725.01.T01:CDS
GAGTTACCAATCCTTCCAAA+TGG 0.500630 2:+19686467 MsG0280007725.01.T01:intron
CAGCTTTGGTAACAATTGTA+GGG 0.502451 2:-19684339 None:intergenic
GGTTGGCATGTTTCTCGACT+CGG 0.505106 2:+19684065 MsG0280007725.01.T01:CDS
TTAACTCTTGATAGCATTGG+TGG 0.517292 2:+19685620 MsG0280007725.01.T01:intron
CTGCAATGGATGAATTGGTT+AGG 0.518596 2:+19683866 MsG0280007725.01.T01:CDS
GATGATACAAGCCAGCCAAA+TGG 0.520622 2:+19685674 MsG0280007725.01.T01:CDS
ATCTTCCAAATATTCAGGAT+TGG 0.522094 2:+19684020 MsG0280007725.01.T01:CDS
AACTCTTGATAGCATTGGTG+GGG 0.529682 2:+19685622 MsG0280007725.01.T01:intron
ACTATGAGGAGAGGTGTGCT+AGG 0.529898 2:+19683784 MsG0280007725.01.T01:CDS
ATTAGTGGCATAGATTTGGT+TGG 0.532831 2:+19684048 MsG0280007725.01.T01:CDS
AAAACTTTCTGAGCAGGCAG+AGG 0.539007 2:-19685731 None:intergenic
TGGCTGGCTTGTATCATCGT+CGG 0.539237 2:-19685669 None:intergenic
TAACTCTTGATAGCATTGGT+GGG 0.540658 2:+19685621 MsG0280007725.01.T01:intron
GCATCTGACGGTATTGAAGA+TGG 0.549299 2:+19686540 MsG0280007725.01.T01:CDS
ATACCGTCAGATGCTCCAAA+TGG 0.553819 2:-19686531 None:intergenic
GTTACTAATGTCTTCATCAC+CGG 0.562506 2:-19681253 None:intergenic
TTCAAGTATGGATGTTTGAG+CGG 0.568957 2:-19681318 None:intergenic
ATGTGAAGGATGCTCTTATG+AGG 0.569555 2:+19686679 MsG0280007725.01.T01:CDS
TTCATGGTAATCTAACTATG+AGG 0.572450 2:+19683770 MsG0280007725.01.T01:CDS
AGATCCTACAAAGCGATCAC+AGG 0.573425 2:+19685766 MsG0280007725.01.T01:CDS
AGATGGCTCGTTGTTAACAT+TGG 0.578589 2:+19686557 MsG0280007725.01.T01:CDS
AGCTACTATTCTAAATGTGA+AGG 0.578993 2:+19686665 MsG0280007725.01.T01:CDS
TCTGCATGTAGCTTGCAAGA+AGG 0.582722 2:-19683633 None:intergenic
AATCTCCAAATACTCAAGAT+GGG 0.583747 2:+19683920 MsG0280007725.01.T01:CDS
AGCAGGCAGAGGGAGCCAAA+TGG 0.585985 2:-19685720 None:intergenic
GATTACTCAATGGGAGGTGG+CGG 0.589387 2:+19681225 MsG0280007725.01.T01:CDS
CTATGAGGAGAGGTGTGCTA+GGG 0.589969 2:+19683785 MsG0280007725.01.T01:CDS
TGAAATTCCACCAAACCGAA+CGG 0.595042 2:+19683726 MsG0280007725.01.T01:CDS
ATGGATTACTCAATGGGAGG+TGG 0.596619 2:+19681222 MsG0280007725.01.T01:CDS
ATGGTGCATTAAGATTTGGT+TGG 0.601403 2:-19686512 None:intergenic
GGTTCGCCAGGAAGTCGAGA+TGG 0.603521 2:+19684385 MsG0280007725.01.T01:CDS
ACTGCAGAAAAGTTGATGCT+GGG 0.604038 2:+19684582 MsG0280007725.01.T01:CDS
AAACTTTCTGAGCAGGCAGA+GGG 0.610006 2:-19685730 None:intergenic
AAGTATGGATGTTTGAGCGG+AGG 0.615778 2:-19681315 None:intergenic
TCAAGTTGTAGATGCTGCAA+TGG 0.619732 2:+19683852 MsG0280007725.01.T01:CDS
GCACCATTTGGAGCATCTGA+CGG 0.621671 2:+19686528 MsG0280007725.01.T01:CDS
GCAGAAAGAGATAACACTAC+CGG 0.621791 2:+19683651 MsG0280007725.01.T01:CDS
AGGCAGAGGGAGCCAAATGG+TGG 0.636325 2:-19685717 None:intergenic
AATTCGCGAGGCCTCACTAG+AGG 0.637219 2:-19684545 None:intergenic
CTGGCTTGTATCATCGTCGG+TGG 0.642130 2:-19685666 None:intergenic
GGTAATCTAACTATGAGGAG+AGG 0.673701 2:+19683775 MsG0280007725.01.T01:CDS
CGAATGATGTTAAATTCGCG+AGG 0.685235 2:-19684557 None:intergenic
GAAATGGATTACTCAATGGG+AGG 0.699453 2:+19681219 None:intergenic
AGTTGACCAAGTGCTTAATG+TGG 0.750936 2:+19686611 MsG0280007725.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAGAATCTAATATAATT+TGG - Chr2:19685123-19685142 None:intergenic 10.0%
!! TAATTAATTATATAAGTGAT+TGG - Chr2:19686298-19686317 None:intergenic 10.0%
!!! AATATATACTAAACATTTTT+AGG + Chr2:19685192-19685211 MsG0280007725.01.T01:intron 10.0%
!!! AATTAATTATTTTTTTCATG+TGG + Chr2:19686309-19686328 MsG0280007725.01.T01:intron 10.0%
!!! ATTAATTTTGTATGAATATA+TGG + Chr2:19681951-19681970 MsG0280007725.01.T01:intron 10.0%
!!! TAATAAGATAATAATTTTTC+GGG + Chr2:19682226-19682245 MsG0280007725.01.T01:intron 10.0%
!!! TATTAATTTATGATTTTCTT+GGG - Chr2:19682274-19682293 None:intergenic 10.0%
!!! TGTTTTTATCTATAATTTTT+CGG + Chr2:19684188-19684207 MsG0280007725.01.T01:intron 10.0%
!!! TTATTAATTTATGATTTTCT+TGG - Chr2:19682275-19682294 None:intergenic 10.0%
!!! TTTAAAATAATAAATTTGTC+CGG + Chr2:19682162-19682181 MsG0280007725.01.T01:intron 10.0%
!! AAACTCTTTAAATTAATACT+CGG + Chr2:19682125-19682144 MsG0280007725.01.T01:intron 15.0%
!! CCAAATTTACAAATATAATT+AGG - Chr2:19683583-19683602 None:intergenic 15.0%
!! CCTAATTATATTTGTAAATT+TGG + Chr2:19683580-19683599 MsG0280007725.01.T01:intron 15.0%
!! GCTTAAAATATAAATTTACA+AGG - Chr2:19685455-19685474 None:intergenic 15.0%
!! GGATATTAAAAATAAAAGAT+CGG + Chr2:19684980-19684999 MsG0280007725.01.T01:intron 15.0%
!! TACTAACTATATTTAATGTA+TGG + Chr2:19681913-19681932 MsG0280007725.01.T01:intron 15.0%
!! TATTTCAAACCTATATAAAA+AGG - Chr2:19681778-19681797 None:intergenic 15.0%
!!! AAGAATTATTTTAAGCTAAA+AGG + Chr2:19684959-19684978 MsG0280007725.01.T01:intron 15.0%
!!! AGCATAAATTTTAAAAGAAA+TGG - Chr2:19686210-19686229 None:intergenic 15.0%
!!! AGTTCACATATAATTTTTAA+TGG + Chr2:19686062-19686081 MsG0280007725.01.T01:intron 15.0%
!!! CAAAAAAGCATTTAAAATTT+GGG - Chr2:19684491-19684510 None:intergenic 15.0%
!!! GATATATAACTCATTTTTAT+AGG + Chr2:19684297-19684316 MsG0280007725.01.T01:intron 15.0%
!!! GTTAATAATTTTGTTATAGT+GGG + Chr2:19686091-19686110 MsG0280007725.01.T01:intron 15.0%
!!! GTTTTCTATTAGTAATTTTA+TGG - Chr2:19682983-19683002 None:intergenic 15.0%
!!! TAAGTGAATTTTTTTTTTTG+TGG + Chr2:19681609-19681628 MsG0280007725.01.T01:intron 15.0%
!!! TAATATAATTTGGAGTATAA+GGG - Chr2:19685113-19685132 None:intergenic 15.0%
!!! TATTCAATTTTTGATTTTGA+AGG + Chr2:19681398-19681417 MsG0280007725.01.T01:intron 15.0%
!!! TGTTAATAATTTTGTTATAG+TGG + Chr2:19686090-19686109 MsG0280007725.01.T01:intron 15.0%
!!! TTATTCAATTTTGATTTTGA+AGG + Chr2:19681470-19681489 MsG0280007725.01.T01:intron 15.0%
!! AACAAATTACAAAAACCATT+TGG - Chr2:19686485-19686504 None:intergenic 20.0%
!! AACTTATTCAAATATCCAAA+TGG - Chr2:19682814-19682833 None:intergenic 20.0%
!! AATAGATGAATAGAGATATT+TGG - Chr2:19685430-19685449 None:intergenic 20.0%
!! ATAATTAGGTATTTATGCAT+GGG - Chr2:19683569-19683588 None:intergenic 20.0%
!! ATATAAAATTATTAGCACCA+AGG - Chr2:19683282-19683301 None:intergenic 20.0%
!! ATATGGATATAATTTAGGAA+AGG - Chr2:19684817-19684836 None:intergenic 20.0%
!! CTCTAAATAATAAATTTCTC+CGG + Chr2:19682557-19682576 MsG0280007725.01.T01:intron 20.0%
!! CTCTATAAATTAATAATGTC+AGG - Chr2:19682584-19682603 None:intergenic 20.0%
!! TATAATTAGGTATTTATGCA+TGG - Chr2:19683570-19683589 None:intergenic 20.0%
!! TATAGAGTAAAACAATCATT+TGG - Chr2:19686001-19686020 None:intergenic 20.0%
!! TATCTGTTACTATTATCAAA+GGG - Chr2:19681713-19681732 None:intergenic 20.0%
!! TCACAAAATATTAATGAAAG+AGG - Chr2:19684246-19684265 None:intergenic 20.0%
!!! AAGATTACTCATTTTGTTAA+CGG + Chr2:19681345-19681364 MsG0280007725.01.T01:CDS 20.0%
!!! ATATATTTCTAAGAGAATGA+TGG + Chr2:19684738-19684757 MsG0280007725.01.T01:intron 20.0%
!!! ATCCATAATTTTTTATCAGT+TGG - Chr2:19686420-19686439 None:intergenic 20.0%
!!! ATTTTGACTATAAAGTGAAA+AGG - Chr2:19682779-19682798 None:intergenic 20.0%
!!! CCAAAAAAGCATTTAAAATT+TGG - Chr2:19684492-19684511 None:intergenic 20.0%
!!! CCAAATTTTAAATGCTTTTT+TGG + Chr2:19684489-19684508 MsG0280007725.01.T01:intron 20.0%
!!! CTAATATAATTTGGAGTATA+AGG - Chr2:19685114-19685133 None:intergenic 20.0%
!!! GAGTTTTTCAATTTTTACAT+TGG - Chr2:19682199-19682218 None:intergenic 20.0%
!!! TAATGACTTTTGAACTTTAA+AGG - Chr2:19682362-19682381 None:intergenic 20.0%
!!! TAGTTTAACTTCTGTTTTTA+GGG + Chr2:19685020-19685039 MsG0280007725.01.T01:intron 20.0%
!!! TGGGAAAAATTTTTATAATC+AGG - Chr2:19684472-19684491 None:intergenic 20.0%
!!! TGTTTTAATTTTCCTTTGTT+TGG + Chr2:19681858-19681877 MsG0280007725.01.T01:intron 20.0%
!!! TTCACAAAACCTTTTTATAT+AGG + Chr2:19681766-19681785 MsG0280007725.01.T01:intron 20.0%
!!! TTTTTCTTGGTTGTATATAT+GGG + Chr2:19685079-19685098 MsG0280007725.01.T01:intron 20.0%
! AAAAACTACACTATCTATCA+TGG + Chr2:19683165-19683184 MsG0280007725.01.T01:intron 25.0%
! AATTACAAAAACCATTTGGA+AGG - Chr2:19686481-19686500 None:intergenic 25.0%
! AATTTGAGTAAACATCCATT+TGG + Chr2:19682796-19682815 MsG0280007725.01.T01:intron 25.0%
! ACGAAAATCTCAAATAAAAG+AGG + Chr2:19683375-19683394 MsG0280007725.01.T01:intron 25.0%
! AGATGGATATGTATTTAAAG+TGG + Chr2:19681983-19682002 MsG0280007725.01.T01:intron 25.0%
! ATATATGGAAGCTAATTAGA+TGG + Chr2:19681966-19681985 MsG0280007725.01.T01:intron 25.0%
! ATGAATAGAGATATTTGGAA+GGG - Chr2:19685425-19685444 None:intergenic 25.0%
! ATTACACATGCTTTCATATA+CGG + Chr2:19683090-19683109 MsG0280007725.01.T01:intron 25.0%
! CTATCTGTTACTATTATCAA+AGG - Chr2:19681714-19681733 None:intergenic 25.0%
! CTCCAACTGATAAAAAATTA+TGG + Chr2:19686415-19686434 MsG0280007725.01.T01:intron 25.0%
! CTGATAAAAAATTATGGATG+TGG + Chr2:19686421-19686440 MsG0280007725.01.T01:intron 25.0%
! GATAACGCATAATATATACA+AGG - Chr2:19681656-19681675 None:intergenic 25.0%
! GGATATTTGAATAAGTTAGA+AGG + Chr2:19682817-19682836 MsG0280007725.01.T01:intron 25.0%
! TAAATTAATAATGTCAGGAC+CGG - Chr2:19682579-19682598 None:intergenic 25.0%
! TATATAATGTATGATCCTAC+AGG - Chr2:19686393-19686412 None:intergenic 25.0%
! TATTAGCACTAAGCATATAT+TGG - Chr2:19683225-19683244 None:intergenic 25.0%
! TATTTGAATAAGTTAGAAGG+TGG + Chr2:19682820-19682839 MsG0280007725.01.T01:intron 25.0%
! TTCAGCTAAGAAGATTTAAT+TGG + Chr2:19684849-19684868 MsG0280007725.01.T01:intron 25.0%
!! ACTATCAAAGTGTTTGAAAT+AGG + Chr2:19684364-19684383 MsG0280007725.01.T01:CDS 25.0%
!! CTTTTTCTTGGTTGTATATA+TGG + Chr2:19685078-19685097 MsG0280007725.01.T01:intron 25.0%
!! GATATAGCCTTTTTAATAAG+TGG - Chr2:19682031-19682050 None:intergenic 25.0%
!! TTATAATTTAGAGCAAACTG+TGG + Chr2:19685803-19685822 MsG0280007725.01.T01:intron 25.0%
!!! AAAAAAAAAAGTGATGGACT+TGG - Chr2:19681563-19681582 None:intergenic 25.0%
!!! AAACCAAAACTTGATTTGTT+TGG - Chr2:19682722-19682741 None:intergenic 25.0%
!!! AACCAAAACTTGATTTGTTT+GGG - Chr2:19682721-19682740 None:intergenic 25.0%
!!! AAGTCCATCACTTTTTTTTT+TGG + Chr2:19681562-19681581 MsG0280007725.01.T01:intron 25.0%
!!! ACTCATTTTTATAGGTCAAA+TGG + Chr2:19684305-19684324 MsG0280007725.01.T01:intron 25.0%
!!! AGTGTAGTTTTTGAAAATCA+CGG - Chr2:19683157-19683176 None:intergenic 25.0%
!!! ATAATTTTGTTATAGTGGGA+TGG + Chr2:19686095-19686114 MsG0280007725.01.T01:intron 25.0%
!!! ATTTTTTTTTTTGTGGTGGT+CGG + Chr2:19681616-19681635 MsG0280007725.01.T01:intron 25.0%
!!! GATTGTGTTTTTTTTTCTTC+AGG + Chr2:19683009-19683028 MsG0280007725.01.T01:intron 25.0%
!!! GTAATCTTACTTTTCAAGTA+TGG - Chr2:19681333-19681352 None:intergenic 25.0%
!!! GTAGTTTAACTTCTGTTTTT+AGG + Chr2:19685019-19685038 MsG0280007725.01.T01:intron 25.0%
!!! GTGAATTTTTTTTTTTGTGG+TGG + Chr2:19681612-19681631 MsG0280007725.01.T01:intron 25.0%
!!! TTTCCTATTTCTCTTTTTCT+TGG + Chr2:19685066-19685085 MsG0280007725.01.T01:intron 25.0%
AAAGGAATTAAGCCAAACAA+AGG - Chr2:19681873-19681892 None:intergenic 30.0%
AAATCTCCAAATACTCAAGA+TGG + Chr2:19683919-19683938 MsG0280007725.01.T01:CDS 30.0%
AAGCATATATTGGTATCATG+TGG - Chr2:19683215-19683234 None:intergenic 30.0%
AATCTCCAAATACTCAAGAT+GGG + Chr2:19683920-19683939 MsG0280007725.01.T01:CDS 30.0%
AATTCAAAAACTTTCTGAGC+AGG - Chr2:19685740-19685759 None:intergenic 30.0%
ACTATACCGAACAATTTCTA+GGG - Chr2:19686267-19686286 None:intergenic 30.0%
ACTGTACATACCAAACAAAA+AGG - Chr2:19682478-19682497 None:intergenic 30.0%
AGCTACTATTCTAAATGTGA+AGG + Chr2:19686665-19686684 MsG0280007725.01.T01:CDS 30.0%
ATCTTCCAAATATTCAGGAT+TGG + Chr2:19684020-19684039 MsG0280007725.01.T01:CDS 30.0%
ATCTTCTTAGCTGAAAATCA+AGG - Chr2:19684844-19684863 None:intergenic 30.0%
ATTAGTAACTTTCGAGATGA+TGG + Chr2:19681267-19681286 MsG0280007725.01.T01:CDS 30.0%
CAACCAAGAAAAAGAGAAAT+AGG - Chr2:19685072-19685091 None:intergenic 30.0%
CAACTGCATTTCAATTATCA+AGG + Chr2:19686178-19686197 MsG0280007725.01.T01:intron 30.0%
CAATGCTATCAAGAGTTAAA+TGG - Chr2:19685619-19685638 None:intergenic 30.0%
CATAATATATACAAGGTCCA+GGG - Chr2:19681649-19681668 None:intergenic 30.0%
CCAAAGAACAATCACTTTAA+AGG + Chr2:19683979-19683998 MsG0280007725.01.T01:CDS 30.0%
CCAACCAAAAAAAAAAGTGA+TGG - Chr2:19681569-19681588 None:intergenic 30.0%
CTCTATACATGTAATGTGTA+TGG - Chr2:19685255-19685274 None:intergenic 30.0%
GAAGAATCTTCCAAATATTC+AGG + Chr2:19684015-19684034 MsG0280007725.01.T01:CDS 30.0%
GACTGAACCACTTATTAAAA+AGG + Chr2:19682021-19682040 MsG0280007725.01.T01:intron 30.0%
GATGAATAGAGATATTTGGA+AGG - Chr2:19685426-19685445 None:intergenic 30.0%
GGAGGATATGGATATAATTT+AGG - Chr2:19684822-19684841 None:intergenic 30.0%
TACATGTATAGAGATCTTGT+TGG + Chr2:19685262-19685281 MsG0280007725.01.T01:intron 30.0%
TACTATACCGAACAATTTCT+AGG - Chr2:19686268-19686287 None:intergenic 30.0%
TACTTATATCAACACCCAAT+TGG + Chr2:19686641-19686660 MsG0280007725.01.T01:CDS 30.0%
TCTTCTTAGCTGAAAATCAA+GGG - Chr2:19684843-19684862 None:intergenic 30.0%
TGAAATTGCACACATTCAAA+TGG + Chr2:19686143-19686162 MsG0280007725.01.T01:intron 30.0%
TGCTAACCAAAAACATATTG+AGG - Chr2:19685898-19685917 None:intergenic 30.0%
TTCATGGTAATCTAACTATG+AGG + Chr2:19683770-19683789 MsG0280007725.01.T01:CDS 30.0%
TTGGGACCGAAAATTATAAA+GGG - Chr2:19682256-19682275 None:intergenic 30.0%
TTTCTGATGAAGTTTCATGA+AGG + Chr2:19682636-19682655 MsG0280007725.01.T01:intron 30.0%
! AAATTATGGATGTGGCTTTA+AGG + Chr2:19686429-19686448 MsG0280007725.01.T01:intron 30.0%
! AATTTTTACATTGGCCAAGT+CGG - Chr2:19682190-19682209 None:intergenic 30.0%
! ATATTTTATCACCTCTAGTG+AGG + Chr2:19684534-19684553 MsG0280007725.01.T01:CDS 30.0%
! CATTTAACTCTTGATAGCAT+TGG + Chr2:19685617-19685636 MsG0280007725.01.T01:intron 30.0%
! GGACTTGGTTAATATATAAC+TGG - Chr2:19681548-19681567 None:intergenic 30.0%
! GGAGATCCCTTTATAATTTT+CGG + Chr2:19682247-19682266 MsG0280007725.01.T01:intron 30.0%
! TTTGGTCCTCAATATGTTTT+TGG + Chr2:19685889-19685908 MsG0280007725.01.T01:intron 30.0%
! TTTGTTTGGCTTAATTCCTT+TGG + Chr2:19681872-19681891 MsG0280007725.01.T01:intron 30.0%
!! AATTATGGATGTGGCTTTAA+GGG + Chr2:19686430-19686449 MsG0280007725.01.T01:intron 30.0%
!! CCTTTAAAGTGATTGTTCTT+TGG - Chr2:19683982-19684001 None:intergenic 30.0%
!! GACTAATTTGCCTTTTTGTT+TGG + Chr2:19682465-19682484 MsG0280007725.01.T01:intron 30.0%
!!! CCATCACTTTTTTTTTTGGT+TGG + Chr2:19681566-19681585 MsG0280007725.01.T01:intron 30.0%
!!! TTTTTTTTTTTGTGGTGGTC+GGG + Chr2:19681617-19681636 MsG0280007725.01.T01:intron 30.0%
AAAGTGTGATTAACCTCCTA+TGG - Chr2:19685389-19685408 None:intergenic 35.0%
AACTACACTATCTATCATGG+TGG + Chr2:19683168-19683187 MsG0280007725.01.T01:intron 35.0%
AAGATCGGAATTGTCTCAAT+AGG + Chr2:19684995-19685014 MsG0280007725.01.T01:intron 35.0%
ACTACTGTGTTCATATGCAT+TGG - Chr2:19682392-19682411 None:intergenic 35.0%
AGATCGGAATTGTCTCAATA+GGG + Chr2:19684996-19685015 MsG0280007725.01.T01:intron 35.0%
ATACCTGTTGAAGAAACCAT+AGG + Chr2:19685370-19685389 MsG0280007725.01.T01:intron 35.0%
ATCGCTTTGTAGGATCTTTA+AGG - Chr2:19685763-19685782 None:intergenic 35.0%
ATGTGTGCAATTTCATGCAT+TGG - Chr2:19686138-19686157 None:intergenic 35.0%
CAAAAACCATTTGGAAGGAT+TGG - Chr2:19686476-19686495 None:intergenic 35.0%
CAACATGAACGAGAGAAAAA+CGG + Chr2:19683320-19683339 MsG0280007725.01.T01:intron 35.0%
CCAAATCTTAATGCACCATT+TGG + Chr2:19686516-19686535 MsG0280007725.01.T01:CDS 35.0%
CCAAATGGTGCATTAAGATT+TGG - Chr2:19686519-19686538 None:intergenic 35.0%
CCAAGGAAATTCGATTCTTT+AGG - Chr2:19683265-19683284 None:intergenic 35.0%
CCTAAAGAATCGAATTTCCT+TGG + Chr2:19683262-19683281 MsG0280007725.01.T01:intron 35.0%
CTTATGCCCTAGAAATTGTT+CGG + Chr2:19686258-19686277 MsG0280007725.01.T01:intron 35.0%
CTTCACCAATCCTGAATATT+TGG - Chr2:19684028-19684047 None:intergenic 35.0%
CTTGGGACCGAAAATTATAA+AGG - Chr2:19682257-19682276 None:intergenic 35.0%
GAAGATTAGTGGCATAGATT+TGG + Chr2:19684044-19684063 MsG0280007725.01.T01:CDS 35.0%
GCATAATATATACAAGGTCC+AGG - Chr2:19681650-19681669 None:intergenic 35.0%
GCTCTTATGAGGTCTATTTA+AGG + Chr2:19686690-19686709 MsG0280007725.01.T01:CDS 35.0%
GTTACTAATGTCTTCATCAC+CGG - Chr2:19681256-19681275 None:intergenic 35.0%
GTTGGCGACTATCATTTATA+CGG + Chr2:19685280-19685299 MsG0280007725.01.T01:intron 35.0%
TAGAATAGTAGCTGCCAATT+GGG - Chr2:19686658-19686677 None:intergenic 35.0%
TCTAGTGAGCTTAGCTTAAT+TGG - Chr2:19681683-19681702 None:intergenic 35.0%
TTAGAATAGTAGCTGCCAAT+TGG - Chr2:19686659-19686678 None:intergenic 35.0%
TTATATAGTAGCGTCACCAA+AGG - Chr2:19681891-19681910 None:intergenic 35.0%
TTCAAGTATGGATGTTTGAG+CGG - Chr2:19681321-19681340 None:intergenic 35.0%
TTTGGAGATTTGACCCAAAA+AGG - Chr2:19683910-19683929 None:intergenic 35.0%
! AGCCCAAACAAATCAAGTTT+TGG + Chr2:19682716-19682735 MsG0280007725.01.T01:CDS 35.0%
! ATGGTGCATTAAGATTTGGT+TGG - Chr2:19686515-19686534 None:intergenic 35.0%
! ATTAGTGGCATAGATTTGGT+TGG + Chr2:19684048-19684067 MsG0280007725.01.T01:CDS 35.0%
! ATTTTTACATTGGCCAAGTC+GGG - Chr2:19682189-19682208 None:intergenic 35.0%
! CACTTTGATAGTTTCAGCTT+TGG - Chr2:19684356-19684375 None:intergenic 35.0%
! CAGCTTTGGTAACAATTGTA+GGG - Chr2:19684342-19684361 None:intergenic 35.0%
! TCAGCTTTGGTAACAATTGT+AGG - Chr2:19684343-19684362 None:intergenic 35.0%
! TTAACTCTTGATAGCATTGG+TGG + Chr2:19685620-19685639 MsG0280007725.01.T01:intron 35.0%
!! ATTATGGATGTGGCTTTAAG+GGG + Chr2:19686431-19686450 MsG0280007725.01.T01:intron 35.0%
!! GATAAAGCTTGCTGATAGAA+TGG + Chr2:19685545-19685564 MsG0280007725.01.T01:intron 35.0%
!! TAACTCTTGATAGCATTGGT+GGG + Chr2:19685621-19685640 MsG0280007725.01.T01:intron 35.0%
AAATGCTCAGCTGAAACAAG+AGG + Chr2:19683486-19683505 MsG0280007725.01.T01:intron 40.0%
AATATTCTCGAATGTGCCTC+TGG + Chr2:19685859-19685878 MsG0280007725.01.T01:intron 40.0%
AATTACGTTGCAGCGAACTT+TGG - Chr2:19682433-19682452 None:intergenic 40.0%
AGAAGTTTCACTTCTCCTGT+AGG + Chr2:19686375-19686394 MsG0280007725.01.T01:intron 40.0%
AGAATGTGCGAGAGATCTTT+AGG + Chr2:19685331-19685350 MsG0280007725.01.T01:intron 40.0%
AGATGCTGCAATGGATGAAT+TGG + Chr2:19683861-19683880 MsG0280007725.01.T01:CDS 40.0%
AGATGGCTCGTTGTTAACAT+TGG + Chr2:19686557-19686576 MsG0280007725.01.T01:CDS 40.0%
AGTGGGATGGTCTTTCTTTA+TGG + Chr2:19686108-19686127 MsG0280007725.01.T01:intron 40.0%
AGTTGACCAAGTGCTTAATG+TGG + Chr2:19686611-19686630 MsG0280007725.01.T01:CDS 40.0%
ATCATTCGTGAAATGCCTCA+TGG + Chr2:19684692-19684711 MsG0280007725.01.T01:intron 40.0%
ATCCTAAGCTGATCACGAAA+AGG - Chr2:19684881-19684900 None:intergenic 40.0%
ATGTGAAGGATGCTCTTATG+AGG + Chr2:19686679-19686698 MsG0280007725.01.T01:CDS 40.0%
ATTACGTTGCAGCGAACTTT+GGG - Chr2:19682432-19682451 None:intergenic 40.0%
ATTTATACGGAGCTGAAAGC+TGG + Chr2:19685293-19685312 MsG0280007725.01.T01:intron 40.0%
CAGTGATCCAAACACTTGAA+GGG + Chr2:19685511-19685530 MsG0280007725.01.T01:intron 40.0%
CATCTTCCACATTAAGCACT+TGG - Chr2:19686620-19686639 None:intergenic 40.0%
CATTCAAATGGACCCTATCA+TGG + Chr2:19686155-19686174 MsG0280007725.01.T01:intron 40.0%
CGAATGATGTTAAATTCGCG+AGG - Chr2:19684560-19684579 None:intergenic 40.0%
CTGAAAATCAAGGGAGGATA+TGG - Chr2:19684834-19684853 None:intergenic 40.0%
CTGCAATGGATGAATTGGTT+AGG + Chr2:19683866-19683885 MsG0280007725.01.T01:CDS 40.0%
GAAATGCAGTTGCCATGATA+GGG - Chr2:19686170-19686189 None:intergenic 40.0%
GAACAAGAGAACTCTGTTGA+AGG + Chr2:19682744-19682763 MsG0280007725.01.T01:CDS 40.0%
GAGTGCTCAAATCATGTTCA+TGG + Chr2:19683754-19683773 MsG0280007725.01.T01:CDS 40.0%
GAGTTACCAATCCTTCCAAA+TGG + Chr2:19686467-19686486 MsG0280007725.01.T01:intron 40.0%
GATCGGAATTGTCTCAATAG+GGG + Chr2:19684997-19685016 MsG0280007725.01.T01:intron 40.0%
GCAGAAAGAGATAACACTAC+CGG + Chr2:19683651-19683670 MsG0280007725.01.T01:CDS 40.0%
GGTAATCTAACTATGAGGAG+AGG + Chr2:19683775-19683794 MsG0280007725.01.T01:CDS 40.0%
GTCAATTGGCTGTGAAAGTT+GGG + Chr2:19682689-19682708 MsG0280007725.01.T01:CDS 40.0%
GTGTACCCATCTTGAGTATT+TGG - Chr2:19683928-19683947 None:intergenic 40.0%
TATTCCTCCCTTCAAGTGTT+TGG - Chr2:19685521-19685540 None:intergenic 40.0%
TCAGTGATCCAAACACTTGA+AGG + Chr2:19685510-19685529 MsG0280007725.01.T01:intron 40.0%
TCATTCGTGAAATGCCTCAT+GGG + Chr2:19684693-19684712 MsG0280007725.01.T01:intron 40.0%
TCTTAGCTGAAAATCAAGGG+AGG - Chr2:19684840-19684859 None:intergenic 40.0%
TGAAATGCAGTTGCCATGAT+AGG - Chr2:19686171-19686190 None:intergenic 40.0%
TGAAATTCCACCAAACCGAA+CGG + Chr2:19683726-19683745 MsG0280007725.01.T01:CDS 40.0%
TTGAGCACTCATAAACCGTT+CGG - Chr2:19683744-19683763 None:intergenic 40.0%
TTGTGATGCTTAACAATGCC+TGG + Chr2:19685578-19685597 MsG0280007725.01.T01:intron 40.0%
! TCAAGTTGTAGATGCTGCAA+TGG + Chr2:19683852-19683871 MsG0280007725.01.T01:CDS 40.0%
! TCAGGATTGGTGAAGATTAG+TGG + Chr2:19684033-19684052 MsG0280007725.01.T01:CDS 40.0%
! TTAAGAGCTTGCTCAAACTC+CGG - Chr2:19683673-19683692 None:intergenic 40.0%
!! AAATGTTGATGGTCTTCCAC+AGG - Chr2:19683445-19683464 None:intergenic 40.0%
!! AACTCTTGATAGCATTGGTG+GGG + Chr2:19685622-19685641 MsG0280007725.01.T01:intron 40.0%
!! ACTGCAGAAAAGTTGATGCT+GGG + Chr2:19684582-19684601 MsG0280007725.01.T01:CDS 40.0%
!! AGAAAAGTTGATGCTGGGTA+TGG + Chr2:19684587-19684606 MsG0280007725.01.T01:intron 40.0%
!! ATGGACTAGTGCTCAGAATT+TGG - Chr2:19686587-19686606 None:intergenic 40.0%
!! GAAAAGTTGATGCTGGGTAT+GGG + Chr2:19684588-19684607 MsG0280007725.01.T01:intron 40.0%
!! TACTGCAGAAAAGTTGATGC+TGG + Chr2:19684581-19684600 MsG0280007725.01.T01:CDS 40.0%
!! TCGAGATGGAGCTTTATTAC+TGG + Chr2:19684399-19684418 MsG0280007725.01.T01:CDS 40.0%
!! TGGACTAGTGCTCAGAATTT+GGG - Chr2:19686586-19686605 None:intergenic 40.0%
!!! GAGAGTTGATGAGCCTTTTT+GGG + Chr2:19683894-19683913 MsG0280007725.01.T01:CDS 40.0%
!!! TGAGAGTTGATGAGCCTTTT+TGG + Chr2:19683893-19683912 MsG0280007725.01.T01:CDS 40.0%
AAAACTTTCTGAGCAGGCAG+AGG - Chr2:19685734-19685753 None:intergenic 45.0%
AAACTTTCTGAGCAGGCAGA+GGG - Chr2:19685733-19685752 None:intergenic 45.0%
AAGTATGGATGTTTGAGCGG+AGG - Chr2:19681318-19681337 None:intergenic 45.0%
ACAATTTGCGAAGCTTGTGG+GGG + Chr2:19683409-19683428 MsG0280007725.01.T01:intron 45.0%
AGAAAAACGGTGCTCTTCGT+CGG + Chr2:19683333-19683352 MsG0280007725.01.T01:intron 45.0%
AGACCATCAACATTTCGTGC+AGG + Chr2:19683450-19683469 MsG0280007725.01.T01:intron 45.0%
AGATCCTACAAAGCGATCAC+AGG + Chr2:19685766-19685785 MsG0280007725.01.T01:CDS 45.0%
AGCACTTGGTCAACTGCATA+TGG - Chr2:19686606-19686625 None:intergenic 45.0%
AGTCATTCATCCCTACTCAG+AGG + Chr2:19686335-19686354 MsG0280007725.01.T01:intron 45.0%
ATACCGTCAGATGCTCCAAA+TGG - Chr2:19686534-19686553 None:intergenic 45.0%
ATCACCATTTGCCTCTGAGT+AGG - Chr2:19686349-19686368 None:intergenic 45.0%
ATGTGGACGTGTCAGAATCA+CGG - Chr2:19683198-19683217 None:intergenic 45.0%
ATTCGTGAAATGCCTCATGG+GGG + Chr2:19684695-19684714 MsG0280007725.01.T01:intron 45.0%
CACAATTTGCGAAGCTTGTG+GGG + Chr2:19683408-19683427 MsG0280007725.01.T01:intron 45.0%
CACTCATAAACCGTTCGGTT+TGG - Chr2:19683739-19683758 None:intergenic 45.0%
CATTCGTGAAATGCCTCATG+GGG + Chr2:19684694-19684713 MsG0280007725.01.T01:intron 45.0%
CCACAATTTGCGAAGCTTGT+GGG + Chr2:19683407-19683426 MsG0280007725.01.T01:intron 45.0%
CCTCCTATGGTTTCTTCAAC+AGG - Chr2:19685376-19685395 None:intergenic 45.0%
CCTGTTGAAGAAACCATAGG+AGG + Chr2:19685373-19685392 MsG0280007725.01.T01:intron 45.0%
CGCTGCAACGTAATTCTAAG+AGG + Chr2:19682438-19682457 MsG0280007725.01.T01:intron 45.0%
CGTCAATTGGCTGTGAAAGT+TGG + Chr2:19682688-19682707 MsG0280007725.01.T01:CDS 45.0%
CTTAACAATGCCTGGTCAAG+TGG + Chr2:19685586-19685605 MsG0280007725.01.T01:intron 45.0%
GATGATACAAGCCAGCCAAA+TGG + Chr2:19685674-19685693 MsG0280007725.01.T01:CDS 45.0%
GTTACCTGTGATCGCTTTGT+AGG - Chr2:19685773-19685792 None:intergenic 45.0%
GTTTCCAACCACGAGAATAG+AGG - Chr2:19684658-19684677 None:intergenic 45.0%
TCACCATTTGCCTCTGAGTA+GGG - Chr2:19686348-19686367 None:intergenic 45.0%
TCACGAATGATGCATCCAGA+GGG - Chr2:19684683-19684702 None:intergenic 45.0%
TCTCCTGCACGAAATGTTGA+TGG - Chr2:19683456-19683475 None:intergenic 45.0%
TCTGAGTAGGGATGAATGAC+TGG - Chr2:19686336-19686355 None:intergenic 45.0%
TGATCCAAACACTTGAAGGG+AGG + Chr2:19685514-19685533 MsG0280007725.01.T01:intron 45.0%
TGATGGTCTTCCACAGGAAA+TGG - Chr2:19683439-19683458 None:intergenic 45.0%
TGGTTAAACTCCACTTGACC+AGG - Chr2:19685599-19685618 None:intergenic 45.0%
TTACTGCTGCTACCACCATT+TGG + Chr2:19685705-19685724 MsG0280007725.01.T01:CDS 45.0%
TTCACGAATGATGCATCCAG+AGG - Chr2:19684684-19684703 None:intergenic 45.0%
! AGCTGATCACGAAAAGGTGT+TGG - Chr2:19684875-19684894 None:intergenic 45.0%
! ATGGATTACTCAATGGGAGG+TGG + Chr2:19681222-19681241 MsG0280007725.01.T01:CDS 45.0%
! CACCTTTTCGTGATCAGCTT+AGG + Chr2:19684876-19684895 MsG0280007725.01.T01:intron 45.0%
! GAGAATAGAGGTGCAGTGTT+TGG - Chr2:19684646-19684665 None:intergenic 45.0%
! GCAGTAACAACAGTGCCATT+TGG - Chr2:19685692-19685711 None:intergenic 45.0%
! GCATCTGACGGTATTGAAGA+TGG + Chr2:19686540-19686559 MsG0280007725.01.T01:CDS 45.0%
! GTGTTTGAAATAGGTTCGCC+AGG + Chr2:19684373-19684392 MsG0280007725.01.T01:CDS 45.0%
! TCTGCATGTAGCTTGCAAGA+AGG - Chr2:19683636-19683655 None:intergenic 45.0%
!! TAACAACAGTGCCATTTGGC+TGG - Chr2:19685688-19685707 None:intergenic 45.0%
!! TCATAAACCGTTCGGTTTGG+TGG - Chr2:19683736-19683755 None:intergenic 45.0%
!! TAAAAATAAATATTAAAGTT+CGG - Chr2:19682946-19682965 None:intergenic 5.0%
!! TGAAATAATATATAAAAAAA+AGG - Chr2:19681750-19681769 None:intergenic 5.0%
!!! ATAATAAGATAATAATTTTT+CGG + Chr2:19682225-19682244 MsG0280007725.01.T01:intron 5.0%
AAAGCTCCATCTCGACTTCC+TGG - Chr2:19684394-19684413 None:intergenic 50.0%
AAATTTGTCCGGTCCCGACT+TGG + Chr2:19682173-19682192 MsG0280007725.01.T01:intron 50.0%
ACACTGCACCTCTATTCTCG+TGG + Chr2:19684647-19684666 MsG0280007725.01.T01:intron 50.0%
AGCGGAGGTAAGACGTTTGT+AGG - Chr2:19681303-19681322 None:intergenic 50.0%
ATTCTCGAATGTGCCTCTGG+TGG + Chr2:19685862-19685881 MsG0280007725.01.T01:intron 50.0%
CATCCCTACTCAGAGGCAAA+TGG + Chr2:19686342-19686361 MsG0280007725.01.T01:intron 50.0%
CCCACAAGCTTCGCAAATTG+TGG - Chr2:19683410-19683429 None:intergenic 50.0%
CGGAGCTGAAAGCTGGATTA+AGG + Chr2:19685300-19685319 MsG0280007725.01.T01:intron 50.0%
GAAAAACGGTGCTCTTCGTC+GGG + Chr2:19683334-19683353 MsG0280007725.01.T01:intron 50.0%
GATTACTCAATGGGAGGTGG+CGG + Chr2:19681225-19681244 MsG0280007725.01.T01:CDS 50.0%
GCCACAATTTGCGAAGCTTG+TGG + Chr2:19683406-19683425 MsG0280007725.01.T01:intron 50.0%
GGTTGGCATGTTTCTCGACT+CGG + Chr2:19684065-19684084 MsG0280007725.01.T01:CDS 50.0%
TGCACCTCTATTCTCGTGGT+TGG + Chr2:19684651-19684670 MsG0280007725.01.T01:intron 50.0%
TGGTCTTCCACAGGAAATGG+TGG - Chr2:19683436-19683455 None:intergenic 50.0%
! ACTATGAGGAGAGGTGTGCT+AGG + Chr2:19683784-19683803 MsG0280007725.01.T01:CDS 50.0%
! CTATGAGGAGAGGTGTGCTA+GGG + Chr2:19683785-19683804 MsG0280007725.01.T01:CDS 50.0%
! GCACCATTTGGAGCATCTGA+CGG + Chr2:19686528-19686547 MsG0280007725.01.T01:CDS 50.0%
!! TGGCTGGCTTGTATCATCGT+CGG - Chr2:19685672-19685691 None:intergenic 50.0%
AATGCCTCATGGGGGTTGTC+TGG + Chr2:19684703-19684722 MsG0280007725.01.T01:intron 55.0%
AATTCGCGAGGCCTCACTAG+AGG - Chr2:19684548-19684567 None:intergenic 55.0%
AGGACCAAAGTCACCACCAG+AGG - Chr2:19685878-19685897 None:intergenic 55.0%
AGGTGCAGTGTTTGGTCGAG+AGG - Chr2:19684638-19684657 None:intergenic 55.0%
CGAGGCAGAACGACGTCAAT+TGG + Chr2:19682675-19682694 MsG0280007725.01.T01:CDS 55.0%
CGTGGTTGGAAACATCCCTC+TGG + Chr2:19684665-19684684 MsG0280007725.01.T01:intron 55.0%
CTAACCAGACAACCCCCATG+AGG - Chr2:19684710-19684729 None:intergenic 55.0%
TACATTGGCCAAGTCGGGAC+CGG - Chr2:19682184-19682203 None:intergenic 55.0%
! CTGGCTTGTATCATCGTCGG+TGG - Chr2:19685669-19685688 None:intergenic 55.0%
! TGTGCCTCTGGTGGTGACTT+TGG + Chr2:19685871-19685890 MsG0280007725.01.T01:intron 55.0%
AGCAGGCAGAGGGAGCCAAA+TGG - Chr2:19685723-19685742 None:intergenic 60.0%
AGGCAGAGGGAGCCAAATGG+TGG - Chr2:19685720-19685739 None:intergenic 60.0%
GGAATGCCACCATCCAGACG+AGG + Chr2:19682657-19682676 MsG0280007725.01.T01:intron 60.0%
GGTTCGCCAGGAAGTCGAGA+TGG + Chr2:19684385-19684404 MsG0280007725.01.T01:CDS 60.0%
GTCGTTCTGCCTCGTCTGGA+TGG - Chr2:19682669-19682688 None:intergenic 60.0%
GTTCTGCCTCGTCTGGATGG+TGG - Chr2:19682666-19682685 None:intergenic 60.0%
TGACGTCGTTCTGCCTCGTC+TGG - Chr2:19682673-19682692 None:intergenic 60.0%
TGGGGGTCCACCATTTCCTG+TGG + Chr2:19683426-19683445 MsG0280007725.01.T01:intron 60.0%
TGGTGGTCGGGTTTGAACCC+TGG + Chr2:19681629-19681648 MsG0280007725.01.T01:intron 60.0%
! ATGGGAGGTGGCGGTGAGTC+CGG + Chr2:19681234-19681253 MsG0280007725.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr2 gene 19681222 19686710 19681222 ID=MsG0280007725.01;Name=MsG0280007725.01
Chr2 mRNA 19681222 19686710 19681222 ID=MsG0280007725.01.T01;Parent=MsG0280007725.01;Name=MsG0280007725.01.T01;_AED=0.46;_eAED=0.46;_QI=0|0|0|1|1|1|7|0|430
Chr2 exon 19681222 19681366 19681222 ID=MsG0280007725.01.T01:exon:10223;Parent=MsG0280007725.01.T01
Chr2 exon 19682674 19682765 19682674 ID=MsG0280007725.01.T01:exon:10224;Parent=MsG0280007725.01.T01
Chr2 exon 19683616 19684086 19683616 ID=MsG0280007725.01.T01:exon:10225;Parent=MsG0280007725.01.T01
Chr2 exon 19684319 19684420 19684319 ID=MsG0280007725.01.T01:exon:10226;Parent=MsG0280007725.01.T01
Chr2 exon 19684518 19684603 19684518 ID=MsG0280007725.01.T01:exon:10227;Parent=MsG0280007725.01.T01
Chr2 exon 19685634 19685787 19685634 ID=MsG0280007725.01.T01:exon:10228;Parent=MsG0280007725.01.T01
Chr2 exon 19686468 19686710 19686468 ID=MsG0280007725.01.T01:exon:10229;Parent=MsG0280007725.01.T01
Chr2 CDS 19681222 19681366 19681222 ID=MsG0280007725.01.T01:cds;Parent=MsG0280007725.01.T01
Chr2 CDS 19682674 19682765 19682674 ID=MsG0280007725.01.T01:cds;Parent=MsG0280007725.01.T01
Chr2 CDS 19683616 19684086 19683616 ID=MsG0280007725.01.T01:cds;Parent=MsG0280007725.01.T01
Chr2 CDS 19684319 19684420 19684319 ID=MsG0280007725.01.T01:cds;Parent=MsG0280007725.01.T01
Chr2 CDS 19684518 19684603 19684518 ID=MsG0280007725.01.T01:cds;Parent=MsG0280007725.01.T01
Chr2 CDS 19685634 19685787 19685634 ID=MsG0280007725.01.T01:cds;Parent=MsG0280007725.01.T01
Chr2 CDS 19686468 19686710 19686468 ID=MsG0280007725.01.T01:cds;Parent=MsG0280007725.01.T01
Gene Sequence

>MsG0280007725.01.T01

ATGGATTACTCAATGGGAGGTGGCGGTGAGTCCGGTGATGAAGACATTAGTAACTTTCGAGATGATGGAAACAAACTTCCTACAAACGTCTTACCTCCGCTCAAACATCCATACTTGAAAAGTAAGATTACTCATTTTGTTAACGACGAGGCAGAACGACGTCAATTGGCTGTGAAAGTTGGGCTTGAGCCCAAACAAATCAAGTTTTGGTTTCAGAACAAGAGAACTCTGTTGAAGTGTGAAAAAATGTCTAGCCTTCTTGCAAGCTACATGCAGAAAGAGATAACACTACCGGAGTTTGAGCAAGCTCTTAAGTCTATAAAATCATTTTCACGTGACAGAGAACTTGAAATTCCACCAAACCGAACGGTTTATGAGTGCTCAAATCATGTTCATGGTAATCTAACTATGAGGAGAGGTGTGCTAGGGCTCAACTTAACACAAAACTATGATGCACAAAAGATAACTATGTCTCAAGTTGTAGATGCTGCAATGGATGAATTGGTTAGGCTTGTGAGAGTTGATGAGCCTTTTTGGGTCAAATCTCCAAATACTCAAGATGGGTACACTCTTCATCGCGAAAGTTATGAGCAAGTTTTTCCAAAGAACAATCACTTTAAAGGTGCGTATGTGTGCGAAGAATCTTCCAAATATTCAGGATTGGTGAAGATTAGTGGCATAGATTTGGTTGGCATGTTTCTCGACTCGGTCAAATGGACAAACTTGTTCCCTACAATTGTTACCAAAGCTGAAACTATCAAAGTGTTTGAAATAGGTTCGCCAGGAAGTCGAGATGGAGCTTTATTACTGATGAATGAAGAAATGCATATTTTATCACCTCTAGTGAGGCCTCGCGAATTTAACATCATTCGCTACTGCAGAAAAGTTGATGCTGGCATTGGTGGGGTTAGAGTCTCTCTTCGCAATACCACCGACGATGATACAAGCCAGCCAAATGGCACTGTTGTTACTGCTGCTACCACCATTTGGCTCCCTCTGCCTGCTCAGAAAGTTTTTGAATTCCTTAAAGATCCTACAAAGCGATCACAGAGTTACCAATCCTTCCAAATGGTTTTTGTAATTTGTTCAAAGAGCCAACCAAATCTTAATGCACCATTTGGAGCATCTGACGGTATTGAAGATGGCTCGTTGTTAACATTGGCAGCCCAAATTCTGAGCACTAGTCCATATGCAGTTGACCAAGTGCTTAATGTGGAAGATGTTACTTATATCAACACCCAATTGGCAGCTACTATTCTAAATGTGAAGGATGCTCTTATGAGGTCTATTTAA
Protein sequence

>MsG0280007725.01.T01

MDYSMGGGGESGDEDISNFRDDGNKLPTNVLPPLKHPYLKSKITHFVNDEAERRQLAVKVGLEPKQIKFWFQNKRTLLKCEKMSSLLASYMQKEITLPEFEQALKSIKSFSRDRELEIPPNRTVYECSNHVHGNLTMRRGVLGLNLTQNYDAQKITMSQVVDAAMDELVRLVRVDEPFWVKSPNTQDGYTLHRESYEQVFPKNNHFKGAYVCEESSKYSGLVKISGIDLVGMFLDSVKWTNLFPTIVTKAETIKVFEIGSPGSRDGALLLMNEEMHILSPLVRPREFNIIRYCRKVDAGIGGVRVSLRNTTDDDTSQPNGTVVTAATTIWLPLPAQKVFEFLKDPTKRSQSYQSFQMVFVICSKSQPNLNAPFGASDGIEDGSLLTLAAQILSTSPYAVDQVLNVEDVTYINTQLAATILNVKDALMRSI*